Cp4.1LG11g09460.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACGTCCAAATTTTTACGATTCATACATAGAAAGGTTTAGAAAGATCTTTCGAATTCTAAATCTTAGAGGTGTACATGAGTTGGATTGGGTTGGATTGGATTGAGAGAAAATTTTAGACCAACCTAAAATTTCGGGTTGGTTGGATTGGTATCTAACCCACTCTAACCTTACTCTTATAGAATTTTCGAGAAGACTAACAAAGGACAAAATTGTAAAGGATGAAAACAACTAAAGAGTTGTCTATCCAGCATCCTAAATTCCATTTACTCCATCAGGAATGGATGTATAAAGTTAAACAGGAACCTAATACCCTTCATGAATAAAGCAAATATTGCTACAACAAGCAAATTATAAAGCTATCAAAATGGGAGAAGAACCAAAAAAGATAAGTACCTTATATACCGGTTATTTCTGCTCAACTCTTCCTTGTCCAAACAAACCTGTTGCCAGCTCCTTGACCTTGCAGCAGAATCATGGCCTTGGCCTCCCAGAAACTTGGCTTCTTCCTCTGCAGCCTTGCCCATGTCTTGCTGCTATTGGCAGGCTTAGTGCATTGTGATGGTTATCTCTCTCTCCTTTAGTTCCACAGCACTATACACACACAAACACAAGAGTTTCGAACCTCCTAATCGGGGTTCGGTTAGAAATCACGACGCTCCATAATAGTTTGATATTGTCTATTTTAAGCATAAATTTTTATGGTTTTGCTTCTAGTTTCGCCGACCAAAAAGCCTCATATAAATGGAGATAATAGCCTCACTTTGGTCCGCTAATATGAGACTACTTCCCTTAATAATTCTCTCCATCGTGATGGGTCTGTTTGGCTGTCTGTAAACACACAAACAGTTCCATAGTTCCCATATCATTTTCTCAATGCTGCCTCACAAAAGCTTACACCCAATTATATCTATCATTTTGCAGTGAAGGAAGCGCTTTTCAAAGCCATGAACGGGTACAGAGAGTCAAGTAAACTTCCCTCCATGAAGAGGAACCCCAAAGCAGACTGCCTCGTCTCGCAAATGGCTTGGGAATTCGATGACCAGTCGACCATCATCAGCAAGTTCATCAGCGGCTCCACCATCTCTCCAAGCAACCTCACCCAACTACCCAGTCTCCCCGACTACCTATTGCAGTGTAAGATCGAGCTCAACAACACGAAAACGGATCTGATCTTGCCCCTCTACATCCCCAGCTTGGTGTTGAATCTTGTTCTCGATGGATGTACAGGTTCCCAAATGACCAAGTACTTGAGCAAACCTGAATTCACGTCGGTGGGAATTGGGTATTATCAACAATGGGCAGTGATCGCTTTGGGCACCGATTCGCCCCTCGGAAGCTTTAATTCTGCCGTGAATTTGTCTGATCTGGGCCTTAGATATTTTTACTTCGTGTCGTCCTTGTTGGTAGGGTTGTTTCTTCTCTCTGGTTGAGACCGTTGTGTGCTGGTTTCCATCTGAAACGACATGTCGGCATGGTTAGGAAAATTTGAAGGCGTGGTTGCACAATAATTGACTTCTTTTATTTTTATTAATTATGAAAATGTCCATGATTATCACTTTTTATTTTTTTTTATTTATTTTTGGATAAGAAAAGCATGCTTAATGGATGCGTTTATGTTTGGCTAGAATTTAGAAGTATTTTAATTGTTTTTTAAGAGTTACAGTAATATTT ACGTCCAAATTTTTACGATTCATACATAGAAAGGTTTAGAAAGATCTTTCGAATTCTAAATCTTAGAGGTGTACATGAGTTGGATTGGGTTGGATTGGATTGAGAGAAAATTTTAGACCAACCTAAAATTTCGGGTTGGTTGGATTGGTATCTAACCCACTCTAACCTTACTCTTATAGAATTTTCGAGAAGACTAACAAAGGACAAAATTGTAAAGGATGAAAACAACTAAAGAGTTGTCTATCCAGCATCCTAAATTCCATTTACTCCATCAGGAATGGATGTATAAAGTTAAACAGGAACCTAATACCCTTCATGAATAAAGCAAATATTGCTACAACAAGCAAATTATAAAGCTATCAAAATGGGAGAAGAACCAAAAAAGATAAGTACCTTATATACCGGTTATTTCTGCTCAACTCTTCCTTGTCCAAACAAACCTGTTGCCAGCTCCTTGACCTTGCAGCAGAATCATGGCCTTGGCCTCCCAGAAACTTGGCTTCTTCCTCTGCAGCCTTGCCCATGTCTTGCTGCTATTGGCAGGCTTAGTGCATTGTGATGTGAAGGAAGCGCTTTTCAAAGCCATGAACGGGTACAGAGAGTCAAGTAAACTTCCCTCCATGAAGAGGAACCCCAAAGCAGACTGCCTCGTCTCGCAAATGGCTTGGGAATTCGATGACCAGTCGACCATCATCAGCAAGTTCATCAGCGGCTCCACCATCTCTCCAAGCAACCTCACCCAACTACCCAGTCTCCCCGACTACCTATTGCAGTGTAAGATCGAGCTCAACAACACGAAAACGGATCTGATCTTGCCCCTCTACATCCCCAGCTTGGTGTTGAATCTTGTTCTCGATGGATGTACAGGTTCCCAAATGACCAAGTACTTGAGCAAACCTGAATTCACGTCGGTGGGAATTGGGTATTATCAACAATGGGCAGTGATCGCTTTGGGCACCGATTCGCCCCTCGGAAGCTTTAATTCTGCCGTGAATTTGTCTGATCTGGGCCTTAGATATTTTTACTTCGTGTCGTCCTTGTTGGTAGGGTTGTTTCTTCTCTCTGGTTGAGACCGTTGTGTGCTGGTTTCCATCTGAAACGACATGTCGGCATGGTTAGGAAAATTTGAAGGCGTGGTTGCACAATAATTGACTTCTTTTATTTTTATTAATTATGAAAATGTCCATGATTATCACTTTTTATTTTTTTTTATTTATTTTTGGATAAGAAAAGCATGCTTAATGGATGCGTTTATGTTTGGCTAGAATTTAGAAGTATTTTAATTGTTTTTTAAGAGTTACAGTAATATTT ATGGCCTTGGCCTCCCAGAAACTTGGCTTCTTCCTCTGCAGCCTTGCCCATGTCTTGCTGCTATTGGCAGGCTTAGTGCATTGTGATGTGAAGGAAGCGCTTTTCAAAGCCATGAACGGGTACAGAGAGTCAAGTAAACTTCCCTCCATGAAGAGGAACCCCAAAGCAGACTGCCTCGTCTCGCAAATGGCTTGGGAATTCGATGACCAGTCGACCATCATCAGCAAGTTCATCAGCGGCTCCACCATCTCTCCAAGCAACCTCACCCAACTACCCAGTCTCCCCGACTACCTATTGCAGTGTAAGATCGAGCTCAACAACACGAAAACGGATCTGATCTTGCCCCTCTACATCCCCAGCTTGGTGTTGAATCTTGTTCTCGATGGATGTACAGGTTCCCAAATGACCAAGTACTTGAGCAAACCTGAATTCACGTCGGTGGGAATTGGGTATTATCAACAATGGGCAGTGATCGCTTTGGGCACCGATTCGCCCCTCGGAAGCTTTAATTCTGCCGTGAATTTGTCTGATCTGGGCCTTAGATATTTTTACTTCGTGTCGTCCTTGTTGGTAGGGTTGTTTCTTCTCTCTGGTTGA MALASQKLGFFLCSLAHVLLLLAGLVHCDVKEALFKAMNGYRESSKLPSMKRNPKADCLVSQMAWEFDDQSTIISKFISGSTISPSNLTQLPSLPDYLLQCKIELNNTKTDLILPLYIPSLVLNLVLDGCTGSQMTKYLSKPEFTSVGIGYYQQWAVIALGTDSPLGSFNSAVNLSDLGLRYFYFVSSLLVGLFLLSG
BLAST of Cp4.1LG11g09460.1 vs. Swiss-Prot
Match: UGPI4_ARATH (Uncharacterized GPI-anchored protein At3g06035 OS=Arabidopsis thaliana GN=At3g06035 PE=2 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 4.2e-16 Identity = 45/144 (31.25%), Postives = 77/144 (53.47%), Query Frame = 1
BLAST of Cp4.1LG11g09460.1 vs. Swiss-Prot
Match: UGPI3_ARATH (Uncharacterized GPI-anchored protein At5g19250 OS=Arabidopsis thaliana GN=At5g19250 PE=1 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 7.1e-16 Identity = 64/188 (34.04%), Postives = 94/188 (50.00%), Query Frame = 1
BLAST of Cp4.1LG11g09460.1 vs. TrEMBL
Match: A6YTC6_CUCME (GPI-anchored protein-like protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 268.1 bits (684), Expect = 8.6e-69 Identity = 141/199 (70.85%), Postives = 155/199 (77.89%), Query Frame = 1
BLAST of Cp4.1LG11g09460.1 vs. TrEMBL
Match: A0A0A0LIM2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G021650 PE=4 SV=1) HSP 1 Score: 213.8 bits (543), Expect = 1.9e-52 Identity = 112/162 (69.14%), Postives = 127/162 (78.40%), Query Frame = 1
BLAST of Cp4.1LG11g09460.1 vs. TrEMBL
Match: W9S359_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_002452 PE=4 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 5.5e-23 Identity = 69/196 (35.20%), Postives = 112/196 (57.14%), Query Frame = 1
BLAST of Cp4.1LG11g09460.1 vs. TrEMBL
Match: A0A0A0LGC0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G021640 PE=4 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 6.1e-22 Identity = 73/186 (39.25%), Postives = 105/186 (56.45%), Query Frame = 1
BLAST of Cp4.1LG11g09460.1 vs. TrEMBL
Match: A0A022R4C3_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a014351mg PE=4 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 1.5e-20 Identity = 70/195 (35.90%), Postives = 105/195 (53.85%), Query Frame = 1
BLAST of Cp4.1LG11g09460.1 vs. TAIR10
Match: AT1G54860.1 (AT1G54860.1 Glycoprotein membrane precursor GPI-anchored) HSP 1 Score: 95.5 bits (236), Expect = 3.9e-20 Identity = 51/172 (29.65%), Postives = 93/172 (54.07%), Query Frame = 1
BLAST of Cp4.1LG11g09460.1 vs. TAIR10
Match: AT3G06035.1 (AT3G06035.1 Glycoprotein membrane precursor GPI-anchored) HSP 1 Score: 86.3 bits (212), Expect = 2.4e-17 Identity = 45/144 (31.25%), Postives = 77/144 (53.47%), Query Frame = 1
BLAST of Cp4.1LG11g09460.1 vs. TAIR10
Match: AT5G19250.1 (AT5G19250.1 Glycoprotein membrane precursor GPI-anchored) HSP 1 Score: 85.5 bits (210), Expect = 4.0e-17 Identity = 64/188 (34.04%), Postives = 94/188 (50.00%), Query Frame = 1
BLAST of Cp4.1LG11g09460.1 vs. NCBI nr
Match: gi|150036257|gb|ABR67420.1| (GPI-anchored protein-like protein [Cucumis melo subsp. melo]) HSP 1 Score: 268.1 bits (684), Expect = 1.2e-68 Identity = 141/199 (70.85%), Postives = 155/199 (77.89%), Query Frame = 1
BLAST of Cp4.1LG11g09460.1 vs. NCBI nr
Match: gi|659070382|ref|XP_008454803.1| (PREDICTED: uncharacterized GPI-anchored protein At5g19250-like [Cucumis melo]) HSP 1 Score: 268.1 bits (684), Expect = 1.2e-68 Identity = 141/199 (70.85%), Postives = 155/199 (77.89%), Query Frame = 1
BLAST of Cp4.1LG11g09460.1 vs. NCBI nr
Match: gi|700205775|gb|KGN60894.1| (hypothetical protein Csa_2G021650 [Cucumis sativus]) HSP 1 Score: 213.8 bits (543), Expect = 2.8e-52 Identity = 112/162 (69.14%), Postives = 127/162 (78.40%), Query Frame = 1
BLAST of Cp4.1LG11g09460.1 vs. NCBI nr
Match: gi|659070380|ref|XP_008454795.1| (PREDICTED: uncharacterized GPI-anchored protein At5g19250-like [Cucumis melo]) HSP 1 Score: 122.1 bits (305), Expect = 1.1e-24 Identity = 71/174 (40.80%), Postives = 101/174 (58.05%), Query Frame = 1
BLAST of Cp4.1LG11g09460.1 vs. NCBI nr
Match: gi|694445976|ref|XP_009349386.1| (PREDICTED: uncharacterized GPI-anchored protein At3g06035-like [Pyrus x bretschneideri]) HSP 1 Score: 117.5 bits (293), Expect = 2.7e-23 Identity = 73/196 (37.24%), Postives = 115/196 (58.67%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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