Cp4.1LG11g09370.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCCTCATTCCCAAATCCTTCCTTCGGCCATTGCTCCTTCGTAGCACCATCCAATCCATCCTCATCTACGCACTTCCCCTTATCTTTTCCGCGCCCTTCTTCCCTCGCTGCCTTCCCTCCAATTTCATCCACCAAAAATGGGTCCGTTTCGAAAATTCGTGCCAAGTTCGAGAAATTTCAAGGCGAGATTCCCCAGGATGATACACAAGAACCCAATCCGTCAATGTCGTTGCAACAACAAGAACAACAGCCTTCTGTGAGTCAAGAGGTTGAAGAAGATGACAGGTTTTCAATTTCTCTTCCTCCTCAATGTTTGTTTATTGAATCTTAAAGTTGTTTCAACCCTAGAAGTTAATAGTGGAAAGATGGAAAGAATCTCATGGTGGCTCTTATTTGATTGATTAATGAGTTGCATATAATTAAGAGCTAGGTGGTATGGATTTTTTCAAGCTAATGGAGGATTTGTGACCCATAAGTCTCTCAAAATGGTCTTAAATTATGGTTGAGTGATGAAGAACTAAGTTCTGTAAACCCCAAGGGCTGGCCATGGTGGATTTCTTGGTCTAGAAAGTTCATTTATCCCCTAGGAGTGATCCTGAAGTAGCGGCTTGAGATGTTTTGGAGGGTAAGGTGATGCTGGTAGTAAGATATCCTCAAGAGGGAATATGTAACAACCAAGACCACCGCTAACAGATATTGTCCGCTTTGGACCGTTATTTATCATTGTCAGCCTCACGGTTTTAAAACACGTCTACTAGGGAGAGGTTTCCACACCCTTATAAGAAATGTTTCGTTCACCTCTCCAGCCAATGTGAGATCTCACAATTCACCGCCCTTGAAGGCCGACGTCCTTACTGGCACACCGCCTAGTGTCTGGCTCTGATACTATTTGTAACAGCCCAAGGCCACCACTAGCAAATATTGTCTGTTTTGGCCCATTATGTATCACCGTCAGCCTCACGGTTTTAAAACGTGTCTACTAGGGAGAGGTTTCCACACCCTTATAAGGAATGCTTTGTTCACCTCTTCAACCGACGTGGGATCTCAAAGAATCGGACCATGAGCATAAGGCAAGAAGTTGATTCTCTGTAAGCAAGAAATGCTTTAACTAATTGTTTTTACTGTTTGATCATCTATATGACTATTACCAACCACCATAGGTTGACCTAGTAGTCAATAAAGACCTTGTCAATAATAAAGAAGTGGGAGAGAACAAGTTCAAGCCATGGTAGCCACCTACGAACATGTCATCTATTCTTTTGCAAATAGACTAGACATGTTCAAATTAGCTAGGGAACGCTCAGCTTGACTGGAGATATTGTTGAGGATTATTGGAAGGAGTAGTCCCACGTTATTTAATTAAGAGAAAGATCATGGGTTTATAAGTAACGAACACTATCTGTTCACTAGAAGTAAACGTTCTCAATTGATACGAAATGAAAGGAGGAACAGTATTGGCCATCTTTTTGTTTTGTTTTATAAAGATTTTTGTGAAATTGAAATATCCATTCTCATTTGGTTGGTGAAGCAGGACTTTCTCAATGTTTTTACTCTCACTTTCAGCTGCTTGCCTTCAGACTTGGAGGGAGCAGTCAGGCAATCTGGTGAAGCTGCTGGTTTGTTTGTGTCTTCAGGAGGACTAAGAGCAATAGTATGA ATGGCTTCCTCATTCCCAAATCCTTCCTTCGGCCATTGCTCCTTCGTAGCACCATCCAATCCATCCTCATCTACGCACTTCCCCTTATCTTTTCCGCGCCCTTCTTCCCTCGCTGCCTTCCCTCCAATTTCATCCACCAAAAATGGGTCCGTTTCGAAAATTCGTGCCAAGTTCGAGAAATTTCAAGGCGAGATTCCCCAGGATGATACACAAGAACCCAATCCGTCAATGTCGTTGCAACAACAAGAACAACAGCCTTCTGTGAGTCAAGAGGTTGAAGAAGATGACAGCTGCTTGCCTTCAGACTTGGAGGGAGCAGTCAGGCAATCTGGTGAAGCTGCTGGTTTGTTTGTGTCTTCAGGAGGACTAAGAGCAATAGTATGA ATGGCTTCCTCATTCCCAAATCCTTCCTTCGGCCATTGCTCCTTCGTAGCACCATCCAATCCATCCTCATCTACGCACTTCCCCTTATCTTTTCCGCGCCCTTCTTCCCTCGCTGCCTTCCCTCCAATTTCATCCACCAAAAATGGGTCCGTTTCGAAAATTCGTGCCAAGTTCGAGAAATTTCAAGGCGAGATTCCCCAGGATGATACACAAGAACCCAATCCGTCAATGTCGTTGCAACAACAAGAACAACAGCCTTCTGTGAGTCAAGAGGTTGAAGAAGATGACAGCTGCTTGCCTTCAGACTTGGAGGGAGCAGTCAGGCAATCTGGTGAAGCTGCTGGTTTGTTTGTGTCTTCAGGAGGACTAAGAGCAATAGTATGA MASSFPNPSFGHCSFVAPSNPSSSTHFPLSFPRPSSLAAFPPISSTKNGSVSKIRAKFEKFQGEIPQDDTQEPNPSMSLQQQEQQPSVSQEVEEDDSCLPSDLEGAVRQSGEAAGLFVSSGGLRAIV
BLAST of Cp4.1LG11g09370.1 vs. TrEMBL
Match: A0A0A0LLR1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G022800 PE=4 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 9.8e-42 Identity = 101/127 (79.53%), Postives = 108/127 (85.04%), Query Frame = 1
BLAST of Cp4.1LG11g09370.1 vs. TrEMBL
Match: A0A061F1Y0_THECC (Domain of Uncharacterized protein function (DUF1995) isoform 1 OS=Theobroma cacao GN=TCM_026556 PE=4 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 3.8e-17 Identity = 68/124 (54.84%), Postives = 83/124 (66.94%), Query Frame = 1
BLAST of Cp4.1LG11g09370.1 vs. TrEMBL
Match: A0A061F2R0_THECC (Domain of Uncharacterized protein function (DUF1995) isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_026556 PE=4 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 1.4e-16 Identity = 67/122 (54.92%), Postives = 82/122 (67.21%), Query Frame = 1
BLAST of Cp4.1LG11g09370.1 vs. TrEMBL
Match: A0A0D2PGP8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G297000 PE=4 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 4.2e-16 Identity = 70/126 (55.56%), Postives = 81/126 (64.29%), Query Frame = 1
BLAST of Cp4.1LG11g09370.1 vs. TrEMBL
Match: D7U205_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0128g00470 PE=4 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 4.2e-16 Identity = 72/130 (55.38%), Postives = 83/130 (63.85%), Query Frame = 1
BLAST of Cp4.1LG11g09370.1 vs. TAIR10
Match: AT5G27560.1 (AT5G27560.1 Domain of unknown function (DUF1995)) HSP 1 Score: 68.2 bits (165), Expect = 4.3e-12 Identity = 42/86 (48.84%), Postives = 53/86 (61.63%), Query Frame = 1
BLAST of Cp4.1LG11g09370.1 vs. NCBI nr
Match: gi|449442817|ref|XP_004139177.1| (PREDICTED: uncharacterized protein LOC101209109 [Cucumis sativus]) HSP 1 Score: 177.6 bits (449), Expect = 1.4e-41 Identity = 101/127 (79.53%), Postives = 108/127 (85.04%), Query Frame = 1
BLAST of Cp4.1LG11g09370.1 vs. NCBI nr
Match: gi|659070325|ref|XP_008454557.1| (PREDICTED: uncharacterized protein LOC103494946 [Cucumis melo]) HSP 1 Score: 175.3 bits (443), Expect = 7.0e-41 Identity = 100/127 (78.74%), Postives = 106/127 (83.46%), Query Frame = 1
BLAST of Cp4.1LG11g09370.1 vs. NCBI nr
Match: gi|590643565|ref|XP_007030838.1| (Domain of Uncharacterized protein function (DUF1995) isoform 1 [Theobroma cacao]) HSP 1 Score: 95.9 bits (237), Expect = 5.4e-17 Identity = 68/124 (54.84%), Postives = 83/124 (66.94%), Query Frame = 1
BLAST of Cp4.1LG11g09370.1 vs. NCBI nr
Match: gi|590643569|ref|XP_007030839.1| (Domain of Uncharacterized protein function (DUF1995) isoform 2, partial [Theobroma cacao]) HSP 1 Score: 94.0 bits (232), Expect = 2.1e-16 Identity = 67/122 (54.92%), Postives = 82/122 (67.21%), Query Frame = 1
BLAST of Cp4.1LG11g09370.1 vs. NCBI nr
Match: gi|147798216|emb|CAN60540.1| (hypothetical protein VITISV_018288 [Vitis vinifera]) HSP 1 Score: 92.4 bits (228), Expect = 6.0e-16 Identity = 72/130 (55.38%), Postives = 83/130 (63.85%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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