Cp4.1LG09g01260.1 (mRNA) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG09g01260.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	ACI13
Location	Cp4.1LG09 : 693638 .. 697360 (-)
Sequence length	1295

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTTCATTTTTTTATTTTTATTTTTGCCAGAAATTGCTGCGGAACATTCTCTTTATCCACGTGCGTAGCACGAGCGATGCAATCGGTCAACTCGCGGATGCAATTGCTGGACCTCGACGTTTCATTTTGCCTGCGAAACTGAGCTTGCTTTCCCCCACGCAGAACCCAGTTTCCGAGATCTTGCCATCGCCATTTTCGAGCACTGAGTAGACGCTTTAACGAACTGGGTTTTTCTTGTTTGGGTCAAATCCAGAATCCCTTAACGCCATTTTCGTTTCTGATTCTGATTCCCACAACAATTCTTTTATTTTTTTCTCTCGGAATAAATGGGTTCCGATCCCTTCCTTTTGCCTGAGATTGGTCCTGATGGGCTTGCCAGGGAAGCTCCTGTAATTGCCTACACTGAAAAGGTATTCGATCTGACTTTTGGGCTACAAGATTTTTCCTAATTTAATTCTTATTTTATCTTTTCAGTTTTGCTTATTTGTTATCGGATTATGTTGCAGATAATCGAGGAAGGGCGTCTTCAATTGAGAAAGTACGAATTTCTTTTATTACCTTTACGGATCTGGTTTTTCTCACATTATAACTCTCTTTATGTGTTTATTTGCTTATGATTGGTAAATTAGAAGTATTACTTGTTATTCTATCTTCCCTGTTCACGGAAATTTTAGTGTGGGGCGTTATCCTAGTTACATTCTTACATGGTAACAGATATGGATGCAGTAAGTCTTTGTTTATAGTTTATAATGCATAAGTGTGCAATTAATGGTACTTGACTTGAGGAAGTCTTGAAGGAACCATCTTGGCTTAGTTAAATTTTTTTTTTTTTTTTCTTGGTGTATTACGAGTTTGTGTTGTAACCTAATGTCGATACCACTGGTTGTACCAAAAGGTCACAACCATCATTGCTCTGATACCACTTGTTGTAACCTAATGTCAAAACCCTCCATGCTCTAATACCAATTGTTATGGAGTGGAACGAATGTCTAACCTCTAAGCTATGTTCTGGTTGAAGGTTAATTAAGTTAAGATCAATGACATAGTGAATTGTAACCGCTAACAGATATTGTCTTTTAAATCCCCTCATCTCTTTCCAACGTAGTGAATTCCTTACAAGGGTGTGGAAACCTCTCTTTAGTGGGTGTGTATTAAAACCTTGAGGGGAAGCCCAGAAGGAAAAGCCCAAAGAGGACAATATCTACTAACGGTGTATTACGAGTTTGTGTTGTAACCTAATGTCAAACCTTCGATGCTTTGATACCATTGGTTGTACCAAAAGGTCACAACCATCGTTGCTCTGATACTACTTGTTGTAACCTAATGTCAAAACCCTCAATGCTCTAATACCAATTGTTATGGAGTGGAACAAATGTCTAACCTCTAAGCTATGTTCAGGTTGAAGGTTAATTAAGTTAAGATCAATGACATGGTGAATTGTAACAGCTAACAAATATTGTCTATTAAGCCCCCTCATCTCTTTCCGACGTAGTGAATTCCTTATAAGGGTGTGGAAACCTCTCTTTAGTGGATGTGTATTAAAACCTTGAGGGGAAGCCCAGAAGAGAAAGCCCAAAGAGGACAATATCTACTAACCAAAGAGGACAATATCTACTAATGGTGGGTTTGGATTGTTACAAATGGTATCAGAGTCAAACATCGGGTGGTGTGTTAGCGAGGACGTTGGCTCCCAAGGGAGTGGATCTTGAGATCCCACATCGGTTGGAGAGGGGAACGAAACATTCCTTAGGGTGTGGAAACCTCTCTCTAGTAGACGCGTTTTAAAACCTGGAGGAAAAGTCCAAAGATGACAATATCTACTAGCGGTGGGCTTGGGCTGTTACATGAACTATAATTTGTGTGGAGATTAAGTGAATGATCTGAACATGGGGAATTTTTATGTTTGGAAAAGTTCTTAGGTTTGAAATTGGTATAGACGAATGAAGGATAGTGTTGAGGCAAAGTTCAGGAGGGTGTTGATTGGGGTAAATTGAGATATCCGAAGCATTGTAGGATAATGTGATCATTTACCATTGATTAACTCATAATGATATCTCAGACAGAGTTGATATTAGTTCCAACATCTCGTGTTGCTGATGGTTGTGATATTTGACGCCAATACTTAAAGTTGACAAGAACATAGAACTAGCAGTAGGATTACCACTATGGTATGACTCTTGTTTATCATTCTGTATTCTGTAGACTCTTCATCAAGTTCTTTATTTTTCTTTTCTTACCCGTATCGTTAAATGGGAAATTTTGTTTATTGTTCGGGTCGTAATTTCATTCAGATACATTGATGAGAATTATTCTAAGATTCGAGATGTTGAACGAGAGTTGGCAGAGCTTACAATGGAGATGAAACTCACATCTGGTCCAAAAAAAGCAGGTTGAGCTTACTGTCAGTTGTTTTATATTCATTAATTGGCTTTGGCTTACCACCAAGCATGGTTACATATCTCTAGCCCTCGAACATCTGCGGAAGAAAATAGAGATGTCAACGGAAAGAATACATGCAGCCAAGTTGAAGGAAGAACAAGCAAAGAAGGTTTGCCCCTTGTCAATTTTTACACGAGTTTAGTGTAATACATACATCTAGGCTGAGATCCCACACGGGTTAGAGAGGAGAACGAAAGGAAAAGTCCCTAGCAGACGCGTTTTAAAACCTTGAGAGAAAGCCCGAAAGGGAAAGTCCAAAGAGGACAATATCTGCTAGGGGTGGGCTAGGGTCGTTACATGGGCTTTCCTCTTTAGATCGTTAATTGGAATTTAATGAATTGAGTCTGATGTTCTCCCTTCAGGCTTGGGAAGCAGCGTCGAAGGTCGTGCAGGACGAGGAAGCAATTAAGCAAAAGCTGTGTGATGACTTGAATCATCTGGTACATAACTTTGTGTTATATTTGGTTATGTTAAAACTAACAAACACAACTGCTTGATAGTACTGTCATTTATTCTTAATAGGTTCAAGAAAGCAATAATTCGCAGTTGACGAGGCTCGAAGAACTAAAACGAAGAATGGAAGCTTTGAATTCAAACCGAGTATCAACCTCTGTTTCTCAAGTAATGATGTCTGCTTGTTAGCCATTAACATAGCCCTGTTGAGAGATATGATGTAAAACAAATGGCTTTCAGGTTACACAAGAAGGCCAAACAATGGGAAGTGCTCAGAACAGCAGAGTTGCAGATTCTTCTGGAGTTGCTACATCAACAGAAACAACAGGTGCAAAAGCAAATGAAAGTGCACGTATTCAAGCAGTCAGTGGTGATGCTCCAGTGGTGAATGGCCAAAATCAAAAGGCATCTTCTGAGACAGAAGTAAGAGGAAAAAAGAAAAACCAGTTTCATGGAAGAGGGAAGGGAATTGGAGCAGTGCCTAAAGGAAGAAGCTCTGCAGACTCTGGGTGGACTGGCTCTGGGTTTGATGTGGATGGTAGGGTATAAGCCTAAGCTCTATACTATCAACTTTCCAATTGTCAATATCAATATCAATACTCGATCAACTGTCAGAATGGTTCTTTTATTTAAACAACACCAAAAGAAAAATAAGTTTATTATAGGGTGGAATAGGAACTATACTCTTAGCCCCCATTTTTATAGTGTTCTTATTTATGCTTCTTGTTCAACTTGTTCCTGAAAGGTTAGTGTTTTCTGTACTGTCACTAGCTTGCCTGTTGAGTTGATTCTTCCATTAATGATATTTGACCAAACTAAGTTCAAACAAT

mRNA sequence

TTTTTCATTTTTTTATTTTTATTTTTGCCAGAAATTGCTGCGGAACATTCTCTTTATCCACGTGCGTAGCACGAGCGATGCAATCGGTCAACTCGCGGATGCAATTGCTGGACCTCGACGTTTCATTTTGCCTGCGAAACTGAGCTTGCTTTCCCCCACGCAGAACCCAGTTTCCGAGATCTTGCCATCGCCATTTTCGAGCACTGAGTAGACGCTTTAACGAACTGGGTTTTTCTTGTTTGGGTCAAATCCAGAATCCCTTAACGCCATTTTCGTTTCTGATTCTGATTCCCACAACAATTCTTTTATTTTTTTCTCTCGGAATAAATGGGTTCCGATCCCTTCCTTTTGCCTGAGATTGGTCCTGATGGGCTTGCCAGGGAAGCTCCTGTAATTGCCTACACTGAAAAGATAATCGAGGAAGGGCGTCTTCAATTGAGAAAATACATTGATGAGAATTATTCTAAGATTCGAGATGTTGAACGAGAGTTGGCAGAGCTTACAATGGAGATGAAACTCACATCTGGTCCAAAAAAAGCAGCGTCGAAGGTCGTGCAGGACGAGGAAGCAATTAAGCAAAAGCTGTGTGATGACTTGAATCATCTGGTTCAAGAAAGCAATAATTCGCAGTTGACGAGGCTCGAAGAACTAAAACGAAGAATGGAAGCTTTGAATTCAAACCGAGTATCAACCTCTGTTTCTCAAGTTACACAAGAAGGCCAAACAATGGGAAGTGCTCAGAACAGCAGAGTTGCAGATTCTTCTGGAGTTGCTACATCAACAGAAACAACAGGTGCAAAAGCAAATGAAAGTGCACGTATTCAAGCAGTCAGTGGTGATGCTCCAGTGGTGAATGGCCAAAATCAAAAGGCATCTTCTGAGACAGAAGTAAGAGGAAAAAAGAAAAACCAGTTTCATGGAAGAGGGAAGGGAATTGGAGCAGTGCCTAAAGGAAGAAGCTCTGCAGACTCTGGGTGGACTGGCTCTGGGTTTGATGTGGATGGTAGGGTATAAGCCTAAGCTCTATACTATCAACTTTCCAATTGTCAATATCAATATCAATACTCGATCAACTGTCAGAATGGTTCTTTTATTTAAACAACACCAAAAGAAAAATAAGTTTATTATAGGGTGGAATAGGAACTATACTCTTAGCCCCCATTTTTATAGTGTTCTTATTTATGCTTCTTGTTCAACTTGTTCCTGAAAGGTTAGTGTTTTCTGTACTGTCACTAGCTTGCCTGTTGAGTTGATTCTTCCATTAATGATATTTGACCAAACTAAGTTCAAACAAT

Coding sequence (CDS)

ATGGGTTCCGATCCCTTCCTTTTGCCTGAGATTGGTCCTGATGGGCTTGCCAGGGAAGCTCCTGTAATTGCCTACACTGAAAAGATAATCGAGGAAGGGCGTCTTCAATTGAGAAAATACATTGATGAGAATTATTCTAAGATTCGAGATGTTGAACGAGAGTTGGCAGAGCTTACAATGGAGATGAAACTCACATCTGGTCCAAAAAAAGCAGCGTCGAAGGTCGTGCAGGACGAGGAAGCAATTAAGCAAAAGCTGTGTGATGACTTGAATCATCTGGTTCAAGAAAGCAATAATTCGCAGTTGACGAGGCTCGAAGAACTAAAACGAAGAATGGAAGCTTTGAATTCAAACCGAGTATCAACCTCTGTTTCTCAAGTTACACAAGAAGGCCAAACAATGGGAAGTGCTCAGAACAGCAGAGTTGCAGATTCTTCTGGAGTTGCTACATCAACAGAAACAACAGGTGCAAAAGCAAATGAAAGTGCACGTATTCAAGCAGTCAGTGGTGATGCTCCAGTGGTGAATGGCCAAAATCAAAAGGCATCTTCTGAGACAGAAGTAAGAGGAAAAAAGAAAAACCAGTTTCATGGAAGAGGGAAGGGAATTGGAGCAGTGCCTAAAGGAAGAAGCTCTGCAGACTCTGGGTGGACTGGCTCTGGGTTTGATGTGGATGGTAGGGTATAA

Protein sequence

MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTMEMKLTSGPKKAASKVVQDEEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGSAQNSRVADSSGVATSTETTGAKANESARIQAVSGDAPVVNGQNQKASSETEVRGKKKNQFHGRGKGIGAVPKGRSSADSGWTGSGFDVDGRV

Homology

[Close]

BLAST of Cp4.1LG09g01260.1 vs. TrEMBL
Match: W9S9H6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_002797 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 1.3e-63
Identity = 150/256 (58.59%), Postives = 176/256 (68.75%), Query Frame = 1


Query: 4   DPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTMEMK 63
           +P LLPEIGPDGL REAPVIAYTEKIIEE +LQLRKYI+ENYS+IRDVER+LA LTMEMK
Sbjct: 8   NPSLLPEIGPDGLPREAPVIAYTEKIIEEEQLQLRKYIEENYSRIRDVERKLANLTMEMK 67

Query: 64  LTSGPKKA--------------------------------ASKVVQDEEAIKQKLCDDLN 123
           LT+GPKKA                                ASK V+DEE +KQKLC+DLN
Sbjct: 68  LTAGPKKAALEHLRKKIEIQTERIRLAKLKEEQAQKAWEAASKAVKDEEEMKQKLCEDLN 127

Query: 124 HLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGSAQNSRVADSSGVATS 183
            LV ES+N+Q +RLEELKRR+EALN +R ST+   V  +G+  G AQ     D+S    S
Sbjct: 128 QLVHESSNTQFSRLEELKRRLEALNPSRASTNF--VPHDGKATGPAQTILAPDASSATNS 187

Query: 184 TETTGAKANESARIQAVSGDAPVVNGQNQKASSETEVRGKKKNQFHGRGKGIGAVPKGRS 228
           TE +G  A ++   +   G+ PV NG NQ+AS E E RGKKK+QFHGRGKGIGAVPKGR 
Sbjct: 188 TEQSGG-ARKTIPNEGNGGNVPVTNGLNQQASVEGEGRGKKKSQFHGRGKGIGAVPKGRG 247

[Close]

BLAST of Cp4.1LG09g01260.1 vs. TrEMBL
Match: A0A0B0P7J0_GOSAR (Poly [ADP-ribose] polymerase 14 OS=Gossypium arboreum GN=F383_01473 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 1.3e-57
Identity = 146/261 (55.94%), Postives = 175/261 (67.05%), Query Frame = 1


Query: 1   MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM 60
           M S+P LLPEIGPDGL RE  VIAYTEKIIEE RLQL KYI ENYSKI D+ERELA LTM
Sbjct: 1   MTSNPTLLPEIGPDGLPREPSVIAYTEKIIEEERLQLTKYIAENYSKIHDIERELANLTM 60

Query: 61  EMKLTSGPKKAA-----SKV---------------------------VQDEEAIKQKLCD 120
           EMKLT+GPKKAA      K+                           + DEEAIKQKLC+
Sbjct: 61  EMKLTAGPKKAALEHMRKKIEMSTERIRIAKEKEEQARKAWESASKALHDEEAIKQKLCE 120

Query: 121 DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGSAQNSRVADSSGV 180
           DLN+LVQES+NSQ  RLEELKRR+EALN ++ ST       + + +G  Q+   A + GV
Sbjct: 121 DLNNLVQESSNSQFARLEELKRRLEALNPSKKSTFSD---HDMKAIGLTQH---AATIGV 180

Query: 181 ATSTETTGAKANESARI--QAVSGDAPVVNGQNQKASSETEVRGKKKNQFHGRGKGIGAV 228
           ++  +TT + +  S R+  Q   G+  V+NGQNQ A+++ EV+GKKKN FHGRGKGIGAV
Sbjct: 181 SSVPQTTESGSTVSTRVPHQGNGGNVQVMNGQNQLATNDGEVKGKKKNTFHGRGKGIGAV 240

[Close]

BLAST of Cp4.1LG09g01260.1 vs. TrEMBL
Match: B9R9J3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1497870 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 1.3e-57
Identity = 147/259 (56.76%), Postives = 171/259 (66.02%), Query Frame = 1


Query: 1   MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM 60
           M S+P L P+IGPDGLAREAPVIAYTEK IEE +LQL++YI+ENYSKIRDVERELA LTM
Sbjct: 1   MASNPSLHPQIGPDGLAREAPVIAYTEKKIEEEQLQLKRYIEENYSKIRDVERELANLTM 60

Query: 61  EMKLTSGPKK--------------------------------AASKVVQDEEAIKQKLCD 120
           EMKLT+GPKK                                AA+K VQDEEAIKQKLC+
Sbjct: 61  EMKLTAGPKKAALEHMRKKIEMSTERIRIARQKEEEARXAYFAATKTVQDEEAIKQKLCE 120

Query: 121 DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGSAQNSRVADSSGV 180
           DLN LVQES+  Q +RLEELKRR+EALN +R STS S    +G+      NS   D+S  
Sbjct: 121 DLNQLVQESSTFQFSRLEELKRRLEALNPSRASTSSS---YDGKL-----NSIALDASST 180

Query: 181 ATSTETTGAKANESARIQAVSGDAPVVNGQNQKASSETEVRGKKKNQFHGRGKGIGAVPK 228
             S    G  A E+   +A   +  V+NGQNQ+ + E E RGKKK QF GRG+GIGAVPK
Sbjct: 181 PLSA-APGGIAPENIPNKASGENVQVMNGQNQQPNIEGEGRGKKKIQFQGRGRGIGAVPK 240

[Close]

BLAST of Cp4.1LG09g01260.1 vs. TrEMBL
Match: A0A0A0L8J1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G179140 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 2.2e-55
Identity = 153/259 (59.07%), Postives = 167/259 (64.48%), Query Frame = 1


Query: 1   MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM 60
           MGSDP LLP                   IIEEG LQLRK IDEN SKIRDVERELA LTM
Sbjct: 1   MGSDPSLLP-------------------IIEEGSLQLRKCIDENLSKIRDVERELANLTM 60

Query: 61  EMKLTSGPKKAA-----SKVVQDEEAIK-QKLCDDLNHLVQESNNSQLT----------- 120
           EMKLTSGPKKAA      K+    E ++  KL ++    V E+ +  +            
Sbjct: 61  EMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKVWEAASKVVQEEEAAKQKLCE 120

Query: 121 ---------------RLEELKRRMEALNSNRVSTSVSQVTQEGQTMGSAQNSRVADSSGV 180
                          RLEELKRRMEALNS+RVSTSVS    +  TMG AQNSRV+DSSGV
Sbjct: 121 DLNHLVQESSNFQLTRLEELKRRMEALNSSRVSTSVS---HDVMTMGGAQNSRVSDSSGV 180

Query: 181 ATSTETTGAKANESARIQAVSGDAPVVNGQNQKASSETEVRGKKKNQFHGRGKGIGAVPK 228
           AT+TE TGAK NE+   Q  S  APV+NGQNQK  SETE RGKKKNQFHGRGKGIGAVPK
Sbjct: 181 ATTTE-TGAKPNENVPNQTTSDAAPVINGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPK 236

[Close]

BLAST of Cp4.1LG09g01260.1 vs. TrEMBL
Match: D7T1T6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0022g02350 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 2.8e-55
Identity = 136/259 (52.51%), Postives = 173/259 (66.80%), Query Frame = 1


Query: 1   MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM 60
           M  +P L PEIGPDGLAREAPVIAYTE+IIEE +LQL+KYI+ENYSKIRDVEREL+ LT 
Sbjct: 1   MAQNPSLAPEIGPDGLAREAPVIAYTERIIEEEQLQLKKYIEENYSKIRDVERELSNLTF 60

Query: 61  EMKLTSGPKKAASKVV----------------QDEEA----------------IKQKLCD 120
           E+KLT+GPKKAA +++                ++E+A                +KQKLCD
Sbjct: 61  ELKLTAGPKKAALELLRKKIEMSTERISVAKQKEEQARKVWEAASKAVKDEEAVKQKLCD 120

Query: 121 DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGSAQNSRVADSSGV 180
           DL+ LVQES+++Q +RLEELKRR+EALN +R S S S    +G+ +   Q+S V D+S  
Sbjct: 121 DLSQLVQESSHTQFSRLEELKRRLEALNPSRASISGS---HDGKLLPQPQSSTVPDASSA 180

Query: 181 ATSTETTGAKANESARIQAVSGDAPVVNGQNQKASSETEVRGKKKNQFHGRGKGIGAVPK 228
               + +G  A E+   Q   G+ P  NG NQ+ + E E RGKKK+   GRG+GIGAVPK
Sbjct: 181 PLIVDPSGG-AGENVANQGNGGNVPATNGHNQQPNVEGEGRGKKKSFIQGRGRGIGAVPK 240

[Close]

BLAST of Cp4.1LG09g01260.1 vs. TAIR10
Match: AT5G51840.1 (AT5G51840.1 unknown protein)

HSP 1 Score: 138.3 bits (347), Expect = 6.0e-33
Identity = 115/260 (44.23%), Postives = 144/260 (55.38%), Query Frame = 1


Query: 1   MGSDPFLLPEIGPDGLAREAPVIAYTEKIIE-----------------------EGRLQL 60
           M SDP L  EIG DGLAREAPVIAYTEKIIE                        G L +
Sbjct: 2   MASDPKLKAEIGADGLAREAPVIAYTEKIIEEEQVQLRKYIEENYTKIRDVEREFGNLSM 61

Query: 61  --------RKYIDENYSKIRDVERELAELTMEMKLTSGPK--KAASKVVQDEEAIKQKLC 120
                   +K   E+  K  +V  E      ++K     K  +AASKVV+DEEA KQ LC
Sbjct: 62  ELKLTAGPKKAAMEHLRKKIEVSTERIHAA-KLKEEEARKAFEAASKVVKDEEATKQSLC 121

Query: 121 DDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGSAQNSRVADSSG 180
           +DLN LVQ+S+N+Q  RLEELKRR+EALN NR STS+ QV QE +T        V DS+ 
Sbjct: 122 EDLNSLVQQSSNTQYARLEELKRRLEALNPNRSSTSIQQV-QEPET------KSVVDSAP 181

Query: 181 VATSTETTGAKANESARIQAVSGDAPVVNGQNQKASSETEVRGKKKNQFHGRGKGIGAVP 228
            A + +T   K   +      + +    +GQ + A++E E + KKK Q  GRG+GIG + 
Sbjct: 182 AANANQTHPGKPENNHG----NEEGGKEHGQ-RPATAEGESKAKKKPQNQGRGRGIGIMN 241

[Close]

BLAST of Cp4.1LG09g01260.1 vs. NCBI nr
Match: gi|778679425|ref|XP_011651127.1| (PREDICTED: uncharacterized protein LOC101210795 [Cucumis sativus])

HSP 1 Score: 270.8 bits (691), Expect = 2.2e-69
Identity = 171/259 (66.02%), Postives = 185/259 (71.43%), Query Frame = 1


Query: 1   MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM 60
           MGSDP LLP IGPDGLAREAPVIAYTEKIIEEG LQLRK IDEN SKIRDVERELA LTM
Sbjct: 1   MGSDPSLLPVIGPDGLAREAPVIAYTEKIIEEGSLQLRKCIDENLSKIRDVERELANLTM 60

Query: 61  EMKLTSGPKKAA-----SKVVQDEEAIK-QKLCDDLNHLVQESNNSQLT----------- 120
           EMKLTSGPKKAA      K+    E ++  KL ++    V E+ +  +            
Sbjct: 61  EMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKVWEAASKVVQEEEAAKQKLCE 120

Query: 121 ---------------RLEELKRRMEALNSNRVSTSVSQVTQEGQTMGSAQNSRVADSSGV 180
                          RLEELKRRMEALNS+RVSTSVS    +  TMG AQNSRV+DSSGV
Sbjct: 121 DLNHLVQESSNFQLTRLEELKRRMEALNSSRVSTSVS---HDVMTMGGAQNSRVSDSSGV 180

Query: 181 ATSTETTGAKANESARIQAVSGDAPVVNGQNQKASSETEVRGKKKNQFHGRGKGIGAVPK 228
           AT+TE TGAK NE+   Q  S  APV+NGQNQK  SETE RGKKKNQFHGRGKGIGAVPK
Sbjct: 181 ATTTE-TGAKPNENVPNQTTSDAAPVINGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPK 240

[Close]

BLAST of Cp4.1LG09g01260.1 vs. NCBI nr
Match: gi|659077326|ref|XP_008439146.1| (PREDICTED: uncharacterized protein LOC103484029 [Cucumis melo])

HSP 1 Score: 255.8 bits (652), Expect = 7.3e-65
Identity = 158/233 (67.81%), Postives = 169/233 (72.53%), Query Frame = 1


Query: 1   MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM 60
           MGSDP LLPEIGPDGLAREAPVIAYTEKIIEEG LQLRK IDEN SKIRDVERELA LTM
Sbjct: 1   MGSDPSLLPEIGPDGLAREAPVIAYTEKIIEEGSLQLRKCIDENLSKIRDVERELANLTM 60

Query: 61  EMKLTSGPKK--------------------------------AASKVVQDEEAIKQKLCD 120
           EMKLTSGPKK                                AASKVVQDEEA KQKLC+
Sbjct: 61  EMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKVWEAASKVVQDEEATKQKLCE 120

Query: 121 DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGSAQNSRVADSSGV 180
           DLNHLVQES+N QLTRLEELKRRMEALNS+RVSTSVS    + + MG AQNSRV+DSS V
Sbjct: 121 DLNHLVQESSNFQLTRLEELKRRMEALNSSRVSTSVS---HDVKAMGGAQNSRVSDSSAV 180

Query: 181 ATSTETTGAKANESARIQAVSGDAPVVNGQNQKASSETEVRGKKKNQFHGRGK 202
           AT+TE TGAK NE+   Q  S  APV+NGQNQK  SETE RGK+K  F   G+
Sbjct: 181 ATTTE-TGAKTNENVPNQTTSDAAPVINGQNQKPPSETEGRGKRKTSFMEEGR 229

[Close]

BLAST of Cp4.1LG09g01260.1 vs. NCBI nr
Match: gi|703158309|ref|XP_010111955.1| (hypothetical protein L484_002797 [Morus notabilis])

HSP 1 Score: 251.1 bits (640), Expect = 1.8e-63
Identity = 150/256 (58.59%), Postives = 176/256 (68.75%), Query Frame = 1


Query: 4   DPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTMEMK 63
           +P LLPEIGPDGL REAPVIAYTEKIIEE +LQLRKYI+ENYS+IRDVER+LA LTMEMK
Sbjct: 8   NPSLLPEIGPDGLPREAPVIAYTEKIIEEEQLQLRKYIEENYSRIRDVERKLANLTMEMK 67

Query: 64  LTSGPKKA--------------------------------ASKVVQDEEAIKQKLCDDLN 123
           LT+GPKKA                                ASK V+DEE +KQKLC+DLN
Sbjct: 68  LTAGPKKAALEHLRKKIEIQTERIRLAKLKEEQAQKAWEAASKAVKDEEEMKQKLCEDLN 127

Query: 124 HLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGSAQNSRVADSSGVATS 183
            LV ES+N+Q +RLEELKRR+EALN +R ST+   V  +G+  G AQ     D+S    S
Sbjct: 128 QLVHESSNTQFSRLEELKRRLEALNPSRASTNF--VPHDGKATGPAQTILAPDASSATNS 187

Query: 184 TETTGAKANESARIQAVSGDAPVVNGQNQKASSETEVRGKKKNQFHGRGKGIGAVPKGRS 228
           TE +G  A ++   +   G+ PV NG NQ+AS E E RGKKK+QFHGRGKGIGAVPKGR 
Sbjct: 188 TEQSGG-ARKTIPNEGNGGNVPVTNGLNQQASVEGEGRGKKKSQFHGRGKGIGAVPKGRG 247

[Close]

BLAST of Cp4.1LG09g01260.1 vs. NCBI nr
Match: gi|223549983|gb|EEF51470.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 231.1 bits (588), Expect = 1.9e-57
Identity = 147/259 (56.76%), Postives = 171/259 (66.02%), Query Frame = 1


Query: 1   MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM 60
           M S+P L P+IGPDGLAREAPVIAYTEK IEE +LQL++YI+ENYSKIRDVERELA LTM
Sbjct: 1   MASNPSLHPQIGPDGLAREAPVIAYTEKKIEEEQLQLKRYIEENYSKIRDVERELANLTM 60

Query: 61  EMKLTSGPKK--------------------------------AASKVVQDEEAIKQKLCD 120
           EMKLT+GPKK                                AA+K VQDEEAIKQKLC+
Sbjct: 61  EMKLTAGPKKAALEHMRKKIEMSTERIRIARQKEEEARXAYFAATKTVQDEEAIKQKLCE 120

Query: 121 DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGSAQNSRVADSSGV 180
           DLN LVQES+  Q +RLEELKRR+EALN +R STS S    +G+      NS   D+S  
Sbjct: 121 DLNQLVQESSTFQFSRLEELKRRLEALNPSRASTSSS---YDGKL-----NSIALDASST 180

Query: 181 ATSTETTGAKANESARIQAVSGDAPVVNGQNQKASSETEVRGKKKNQFHGRGKGIGAVPK 228
             S    G  A E+   +A   +  V+NGQNQ+ + E E RGKKK QF GRG+GIGAVPK
Sbjct: 181 PLSA-APGGIAPENIPNKASGENVQVMNGQNQQPNIEGEGRGKKKIQFQGRGRGIGAVPK 240

[Close]

BLAST of Cp4.1LG09g01260.1 vs. NCBI nr
Match: gi|728841592|gb|KHG21035.1| (Poly [ADP-ribose])

HSP 1 Score: 231.1 bits (588), Expect = 1.9e-57
Identity = 146/261 (55.94%), Postives = 175/261 (67.05%), Query Frame = 1


Query: 1   MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM 60
           M S+P LLPEIGPDGL RE  VIAYTEKIIEE RLQL KYI ENYSKI D+ERELA LTM
Sbjct: 1   MTSNPTLLPEIGPDGLPREPSVIAYTEKIIEEERLQLTKYIAENYSKIHDIERELANLTM 60

Query: 61  EMKLTSGPKKAA-----SKV---------------------------VQDEEAIKQKLCD 120
           EMKLT+GPKKAA      K+                           + DEEAIKQKLC+
Sbjct: 61  EMKLTAGPKKAALEHMRKKIEMSTERIRIAKEKEEQARKAWESASKALHDEEAIKQKLCE 120

Query: 121 DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGSAQNSRVADSSGV 180
           DLN+LVQES+NSQ  RLEELKRR+EALN ++ ST       + + +G  Q+   A + GV
Sbjct: 121 DLNNLVQESSNSQFARLEELKRRLEALNPSKKSTFSD---HDMKAIGLTQH---AATIGV 180

Query: 181 ATSTETTGAKANESARI--QAVSGDAPVVNGQNQKASSETEVRGKKKNQFHGRGKGIGAV 228
           ++  +TT + +  S R+  Q   G+  V+NGQNQ A+++ EV+GKKKN FHGRGKGIGAV
Sbjct: 181 SSVPQTTESGSTVSTRVPHQGNGGNVQVMNGQNQLATNDGEVKGKKKNTFHGRGKGIGAV 240

The following BLAST results are available for this feature:

BLAST of Cp4.1LG09g01260.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG09g01260.1 vs. TrEMBL


Match Name	E-value	Identity	Description
W9S9H6_9ROSA	1.3e-63	58.59	Uncharacterized protein OS=Morus notabilis GN=L484_002797 PE=4 SV=1	[more]
A0A0B0P7J0_GOSAR	1.3e-57	55.94	Poly [ADP-ribose] polymerase 14 OS=Gossypium arboreum GN=F383_01473 PE=4 SV=1	[more]
B9R9J3_RICCO	1.3e-57	56.76	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1497870 PE=4 SV=1	[more]
A0A0A0L8J1_CUCSA	2.2e-55	59.07	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G179140 PE=4 SV=1	[more]
D7T1T6_VITVI	2.8e-55	52.51	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0022g02350 PE=4 SV=...	[more]

BLAST of Cp4.1LG09g01260.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G51840.1	6.0e-33	44.23	unknown protein	[more]

BLAST of Cp4.1LG09g01260.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778679425\|ref\|XP_011651127.1\|	2.2e-69	66.02	PREDICTED: uncharacterized protein LOC101210795 [Cucumis sativus]	[more]
gi\|659077326\|ref\|XP_008439146.1\|	7.3e-65	67.81	PREDICTED: uncharacterized protein LOC103484029 [Cucumis melo]	[more]
gi\|703158309\|ref\|XP_010111955.1\|	1.8e-63	58.59	hypothetical protein L484_002797 [Morus notabilis]	[more]
gi\|223549983\|gb\|EEF51470.1\|	1.9e-57	56.76	conserved hypothetical protein [Ricinus communis]	[more]
gi\|728841592\|gb\|KHG21035.1\|	1.9e-57	55.94	Poly [ADP-ribose]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG09g01260	Cp4.1LG09g01260	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG09g01260.1	Cp4.1LG09g01260.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG09g01260.1:five_prime_utr:001	Cp4.1LG09g01260.1:five_prime_utr:001	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG09g01260.1:cds:006	Cp4.1LG09g01260.1:cds:006	CDS
Cp4.1LG09g01260.1:cds:005	Cp4.1LG09g01260.1:cds:005	CDS
Cp4.1LG09g01260.1:cds:004	Cp4.1LG09g01260.1:cds:004	CDS
Cp4.1LG09g01260.1:cds:003	Cp4.1LG09g01260.1:cds:003	CDS
Cp4.1LG09g01260.1:cds:002	Cp4.1LG09g01260.1:cds:002	CDS
Cp4.1LG09g01260.1:cds:001	Cp4.1LG09g01260.1:cds:001	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG09g01260.1:three_prime_utr:001	Cp4.1LG09g01260.1:three_prime_utr:001	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 98..125 score: -coord: 41..61 scor
None	No IPR available	PANTHER	PTHR35315	FAMILY NOT NAMED	coord: 1..228 score: 3.5
None	No IPR available	PANTHER	PTHR35315:SF1	SUBFAMILY NOT NAMED	coord: 1..228 score: 3.5