Cp4.1LG08g05640.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAGAAGAGAGAGAGAGAGAAAATGATACAGCCCTAGCGGCCTTGTCCCACCCCCTCCCCTTGACGCTGGCTCGACGGTGGATGTCCCCTCTGTTCGTGTTCTTCACAGATCGTATTCCTTCTCTTGGTCTCAAGGTATTTTCTCTATTGCTATCTTCGTCTTATGATCATTCATGAATGTCTGCAAGTTCAAGCTCGATTGAAAATTGATATTTCACAATCATATGAATTTGAGACCGAGAGATGCTTCATTTCGTTATTGATTTTCAGTATCCATGTAAATGTTTGCCCCCCTTTGGAGGGTTGATTTGAATTCCACTCGACTGAATGGAAATTGAGGGATGAAGAATATGTAGTCAATGAAAGAAGATCCTGGGAATTGAAATGAGTTCGTACTCTGCATTGCACGTTGGGGCATATAAATTGTTGCTGCATTATACGATTCTTTTCTTCTTGGAGAGTTCTTCTACTCCAGAATTTATTTTTATTTTCTTTGAACCAAGTTGAATTGTTTATGTCATTGAGTGGATCTGTGGCATTTTGCTTTTGGAAGCTTTTTTCGGCTCCTTCGCTAATAACATTCTAAATCTCAATTGTGCAATAGGATGGTATAAGAAATTGTTTCTGGCTTTGAGTGGATCTGTAACCTTTTTCCTTTGGCAGCTTCCTCATAGCCTTCTTTGATACCAGTCTCGATCCAATTGATTCTTGTATAAAATAAAAGAAAAAGTCCATTTTGGTTCTTATATTTTTTAAAAGTGACCATTTTGATCTGTGTTTGCAAATCTCTAACCCAAATTCTTCGTGGTTTAAATGGAAACTCTTTTAAACAAAATTATGACTATGTTCCAAGAAATTTATGTATAATGTTGTGCTGAAATTGTGTTAAAAATGAGAGAATAAACGAAATTAAAGGGCCTAAACAAACACTTTATTTGTAATGCATGTCTAGTTTGATTTCTTGCAATCTACGCCTTGGTTGTTGTTTTGTTCCTTTGATTTCTACCACTTTATTTGTAATGCGTGTCTAGTTTTGAGGGCTTTTGATTCGACTTCTTGAAAACCCATTTTAGAGCAGTGTTAGTACGTGGAGTTTTGCTTGTTTGATGACGAATTTGTGACTTGGAATTTCTGTGTTGTTTAGTTTCTTTACAAAGGTGTTTTTAGTTGATGGAGAAGGACAAACCCCAGAGCCATTCTGGTGGATTTCTATCCCCATCAAGTCGTTACCCAGGTCTTTCTCCAACTGGAAGCAGTTTCAATGGAAAATCTGAAGCAACCTCGTCTTCAATGACGCTTCCTCCAATGGCTTCGGGTGCTAATTCTGATTCAATTCAATTCAGTCACGGAATGTCCACTAATTCTAATCGGTTCAGCCATGATATTTGTCGGATGCCTGATAACCCACCAAGAAATATTGGTCACAGACGTGCTCATTCAGAAATACTGACCCTTCCTGACGATATATGTTTCAACAGTGACCTAGGTGTCATTGGCAGTGCTGATGGGCCTTCCTTTTCTGATGACACTGAGGAAGATTTGCTGTCCATGTACCTTGACATGGACAAATTCAATTCTTCCTCTGCTACCTCTGCAATGCAAGTTGGCGAGTCATCTGCTGCTGTTGTAGATGCAAGATCAACTCCTTCATCAGAAATTGGAGCAGCAACATCTAAAGACGATGCTGTTGTTGGCTTGAAGGAGAGGCCAAGAGTAAGACACCAGCATAGCCAGTCCATGGATGGCTTGTCAAGCATAAAGCCTGAGATGCTTGTCTCAGGGTCTGAAGAAGTCTCTGCTGCTGACTCCAAGAAATCCGCGTCAGCTACAAAGCTTGCTGAGCTTGCACTAATTGACCCCAAACGTGCAAAGAGGTATAACTTCTTTGGATCTCTTCTCCTATTTTTTGTTCAACATTAAAAAATAAAAAAATAAAAAAAGTGTGTTTTTCTTAATGATATATCCATATCCACAGGCAGGTTTTCCTTGTTGCTTTATTTTGATTATTTTATATCTACTATGCCTGCTCATGTGATGGTCAGAATTATCGTTGCTATTTATGTCAATTCAACATTTCAGCTAATTTGGATCCTTTACCCAAAATTGAAGAAATGTATGATAATATGGAGTATTTTTGTCAATACTTAGACATTTGACTACAAGTTTAGGAGAAATTATTCGAGGAACCTGTCGCAAGAGACTAGTAGCTTTTTACCATGGGATGTATGAGAGACTAATTGTAAAAGTACTTTGTTTTTGTATCCATCGGTTATGAAGGGGAAAATAAATTTGAAAGTCTAAATCCGATGGTTTTAATGGGGCACCCTCATTGTGGCGGCCTCATTGAGTAATTTGGTTAGCATCAATGAGTTTATGACTATTACTGTTAGTTTGTAGGTTTTTTCCTGGCTGATTAATTAATTGAAGCTATTCCTATTCTCTGTATATGAAAGGTCGTTGCACCTTTTGAACTAGTGATAAACTCTCTGGCCTCTGCATTTTGTACAACATTGCTTTCTAATGAATCAAAATGTGTATATTTGAGTGGGTAGGAACCAAATCATTGGTCTTTTTGCCGTGTATGGTTTCTTTTTTCTCTCATTTCTCTTGTGATGAAATTTCCTTATTTATTATGAACATAAGATAATTTGTCTATCAAGACTTCTTTTGATGAATTTTAACTCTAAGAAAATGGAACCCAGTCTTTTGGGTGTATTACGAGACAGCTTTTAGAATTTAACTGGCGTTCGATCATTTACTTGGATTATGTTTGTGTGTTCTCTTATCTCAAAGAGCCTGGAGACTTTTTCAAACCCTGTATTATGTTTACGAGACAGCTTTTCATGTTTGAGATTATTTGCTCTCATGTCCAAGTATTATGTTCCTTCCGTTTCCCATGAAAAGAAGAATCGGAAAATTTGTTCATAATCCTCTATGTTGTGTATCGCATAGGATATGGGCAAATAGACAGTCAGCTGCGAGGTCAAAGGAAAGAAAGATGCGGTACATTGCTGAGCTTGAACGGAAAGTTCTGACTCTGCAAACAGAGGGAACTTCTTTATCTGCTCAGTTAACCCTCTTACAGGTGGATTATCGCATAATTAATCGTGTTGATCATATTTTTGGATGCCCACTCTATTTTTTCATATCATTTGAATTCCAGCATCTTATTTTCTCTGTATTTCAGTATGTAATGACATCGTGTTTTACTTATTATCAGAGAGACACAAACGGTCTTACTGCTGAGAACAGTGAACTAAAGCTACGGTTGCAGACAATGGAGCAGCAGGTTCACCTACAAGATGGTAAGGACCTCATCTTTTATTTCCCTTTTCAGGTGACTGCACACTATGTTTGCCTTCTCTTAATTTTATCTGATCACTCTGTTTTTTATTTTTTGAAGTAAATGTAGGTGCTTGTTGGAAGATGATTTTGTATGCATTTTTTACATTTGTAGACTTTTTTGTTTGAGAGTGATTTTGAAAGGGTTAAAATCGCTTTTGTCGTGATTTGAAATCATTCCCGAACATGGTTTAGCTTTTAAAATCAATTTATATGATATGAAAATCACAGTTAAAGTGTAATCACTCTCAAACATGCCACAAGTCTCCTTATATCATATGAGCTTTTATAGTTGTTAATAAGGGTTGGGGGTTCAGTACAAGCATGGTCTAGGTGAACATTTGTAGAGACATAATAAGGGATGATACTAAACAAGAAGTTGATTAGATGAAGTATCAGAGCATAGCTTTTGAATGATTTTAGGATATGGCGTGTCTTGTTGA AAGAAGAGAGAGAGAGAGAAAATGATACAGCCCTAGCGGCCTTGTCCCACCCCCTCCCCTTGACGCTGGCTCGACGGTGGATGTCCCCTCTGTTCGTGTTCTTCACAGATCGTATTCCTTCTCTTGGTCTCAAGTTTCTTTACAAAGGTGTTTTTAGTTGATGGAGAAGGACAAACCCCAGAGCCATTCTGGTGGATTTCTATCCCCATCAAGTCGTTACCCAGGTCTTTCTCCAACTGGAAGCAGTTTCAATGGAAAATCTGAAGCAACCTCGTCTTCAATGACGCTTCCTCCAATGGCTTCGGGTGCTAATTCTGATTCAATTCAATTCAGTCACGGAATGTCCACTAATTCTAATCGGTTCAGCCATGATATTTGTCGGATGCCTGATAACCCACCAAGAAATATTGGTCACAGACGTGCTCATTCAGAAATACTGACCCTTCCTGACGATATATGTTTCAACAGTGACCTAGGTGTCATTGGCAGTGCTGATGGGCCTTCCTTTTCTGATGACACTGAGGAAGATTTGCTGTCCATGTACCTTGACATGGACAAATTCAATTCTTCCTCTGCTACCTCTGCAATGCAAGTTGGCGAGTCATCTGCTGCTGTTGTAGATGCAAGATCAACTCCTTCATCAGAAATTGGAGCAGCAACATCTAAAGACGATGCTGTTGTTGGCTTGAAGGAGAGGCCAAGAGTAAGACACCAGCATAGCCAGTCCATGGATGGCTTGTCAAGCATAAAGCCTGAGATGCTTGTCTCAGGGTCTGAAGAAGTCTCTGCTGCTGACTCCAAGAAATCCGCGTCAGCTACAAAGCTTGCTGAGCTTGCACTAATTGACCCCAAACGTGCAAAGAGGATATGGGCAAATAGACAGTCAGCTGCGAGGTCAAAGGAAAGAAAGATGCGGTACATTGCTGAGCTTGAACGGAAAGTTCTGACTCTGCAAACAGAGGGAACTTCTTTATCTGCTCAGTTAACCCTCTTACAGAGAGACACAAACGGTCTTACTGCTGAGAACAGTGAACTAAAGCTACGGTTGCAGACAATGGAGCAGCAGGTTCACCTACAAGATGGATATGGCGTGTCTTGTTGA ATGGAGAAGGACAAACCCCAGAGCCATTCTGGTGGATTTCTATCCCCATCAAGTCGTTACCCAGGTCTTTCTCCAACTGGAAGCAGTTTCAATGGAAAATCTGAAGCAACCTCGTCTTCAATGACGCTTCCTCCAATGGCTTCGGGTGCTAATTCTGATTCAATTCAATTCAGTCACGGAATGTCCACTAATTCTAATCGGTTCAGCCATGATATTTGTCGGATGCCTGATAACCCACCAAGAAATATTGGTCACAGACGTGCTCATTCAGAAATACTGACCCTTCCTGACGATATATGTTTCAACAGTGACCTAGGTGTCATTGGCAGTGCTGATGGGCCTTCCTTTTCTGATGACACTGAGGAAGATTTGCTGTCCATGTACCTTGACATGGACAAATTCAATTCTTCCTCTGCTACCTCTGCAATGCAAGTTGGCGAGTCATCTGCTGCTGTTGTAGATGCAAGATCAACTCCTTCATCAGAAATTGGAGCAGCAACATCTAAAGACGATGCTGTTGTTGGCTTGAAGGAGAGGCCAAGAGTAAGACACCAGCATAGCCAGTCCATGGATGGCTTGTCAAGCATAAAGCCTGAGATGCTTGTCTCAGGGTCTGAAGAAGTCTCTGCTGCTGACTCCAAGAAATCCGCGTCAGCTACAAAGCTTGCTGAGCTTGCACTAATTGACCCCAAACGTGCAAAGAGGATATGGGCAAATAGACAGTCAGCTGCGAGGTCAAAGGAAAGAAAGATGCGGTACATTGCTGAGCTTGAACGGAAAGTTCTGACTCTGCAAACAGAGGGAACTTCTTTATCTGCTCAGTTAACCCTCTTACAGAGAGACACAAACGGTCTTACTGCTGAGAACAGTGAACTAAAGCTACGGTTGCAGACAATGGAGCAGCAGGTTCACCTACAAGATGGATATGGCGTGTCTTGTTGA MEKDKPQSHSGGFLSPSSRYPGLSPTGSSFNGKSEATSSSMTLPPMASGANSDSIQFSHGMSTNSNRFSHDICRMPDNPPRNIGHRRAHSEILTLPDDICFNSDLGVIGSADGPSFSDDTEEDLLSMYLDMDKFNSSSATSAMQVGESSAAVVDARSTPSSEIGAATSKDDAVVGLKERPRVRHQHSQSMDGLSSIKPEMLVSGSEEVSAADSKKSASATKLAELALIDPKRAKRIWANRQSAARSKERKMRYIAELERKVLTLQTEGTSLSAQLTLLQRDTNGLTAENSELKLRLQTMEQQVHLQDGYGVSC
BLAST of Cp4.1LG08g05640.1 vs. Swiss-Prot
Match: POF21_ARATH (Probable transcription factor PosF21 OS=Arabidopsis thaliana GN=POSF21 PE=2 SV=1) HSP 1 Score: 321.2 bits (822), Expect = 1.2e-86 Identity = 192/279 (68.82%), Postives = 218/279 (78.14%), Query Frame = 1
BLAST of Cp4.1LG08g05640.1 vs. Swiss-Prot
Match: RF2A_ORYSJ (Transcription factor RF2a OS=Oryza sativa subsp. japonica GN=RF2a PE=1 SV=1) HSP 1 Score: 252.7 bits (644), Expect = 5.3e-66 Identity = 151/241 (62.66%), Postives = 175/241 (72.61%), Query Frame = 1
BLAST of Cp4.1LG08g05640.1 vs. Swiss-Prot
Match: RF2B_ORYSJ (Transcription factor RF2b OS=Oryza sativa subsp. japonica GN=RF2b PE=1 SV=2) HSP 1 Score: 156.0 bits (393), Expect = 6.8e-37 Identity = 106/228 (46.49%), Postives = 131/228 (57.46%), Query Frame = 1
BLAST of Cp4.1LG08g05640.1 vs. Swiss-Prot
Match: VIP1_ARATH (Transcription factor VIP1 OS=Arabidopsis thaliana GN=VIP1 PE=1 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 2.4e-26 Identity = 77/136 (56.62%), Postives = 90/136 (66.18%), Query Frame = 1
BLAST of Cp4.1LG08g05640.1 vs. Swiss-Prot
Match: BZP19_ORYSJ (Basic leucine zipper 19 OS=Oryza sativa subsp. japonica GN=BZIP19 PE=2 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 1.4e-10 Identity = 45/106 (42.45%), Postives = 65/106 (61.32%), Query Frame = 1
BLAST of Cp4.1LG08g05640.1 vs. TrEMBL
Match: A0A0A0L894_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G172930 PE=4 SV=1) HSP 1 Score: 500.7 bits (1288), Expect = 1.3e-138 Identity = 271/307 (88.27%), Postives = 285/307 (92.83%), Query Frame = 1
BLAST of Cp4.1LG08g05640.1 vs. TrEMBL
Match: A0A0A0L642_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G173030 PE=4 SV=1) HSP 1 Score: 434.1 bits (1115), Expect = 1.4e-118 Identity = 241/310 (77.74%), Postives = 263/310 (84.84%), Query Frame = 1
BLAST of Cp4.1LG08g05640.1 vs. TrEMBL
Match: W9QIN9_9ROSA (Putative transcription factor PosF21 OS=Morus notabilis GN=L484_016125 PE=4 SV=1) HSP 1 Score: 422.5 bits (1085), Expect = 4.3e-115 Identity = 235/308 (76.30%), Postives = 255/308 (82.79%), Query Frame = 1
BLAST of Cp4.1LG08g05640.1 vs. TrEMBL
Match: M5XCD0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005999mg PE=4 SV=1) HSP 1 Score: 411.4 bits (1056), Expect = 1.0e-111 Identity = 230/309 (74.43%), Postives = 254/309 (82.20%), Query Frame = 1
BLAST of Cp4.1LG08g05640.1 vs. TrEMBL
Match: A0A068VB62_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00003688001 PE=4 SV=1) HSP 1 Score: 411.0 bits (1055), Expect = 1.3e-111 Identity = 230/310 (74.19%), Postives = 257/310 (82.90%), Query Frame = 1
BLAST of Cp4.1LG08g05640.1 vs. TAIR10
Match: AT1G06070.1 (AT1G06070.1 Basic-leucine zipper (bZIP) transcription factor family protein) HSP 1 Score: 353.6 bits (906), Expect = 1.3e-97 Identity = 204/307 (66.45%), Postives = 236/307 (76.87%), Query Frame = 1
BLAST of Cp4.1LG08g05640.1 vs. TAIR10
Match: AT2G31370.3 (AT2G31370.3 Basic-leucine zipper (bZIP) transcription factor family protein) HSP 1 Score: 321.2 bits (822), Expect = 6.9e-88 Identity = 192/279 (68.82%), Postives = 218/279 (78.14%), Query Frame = 1
BLAST of Cp4.1LG08g05640.1 vs. TAIR10
Match: AT2G40620.1 (AT2G40620.1 Basic-leucine zipper (bZIP) transcription factor family protein) HSP 1 Score: 156.0 bits (393), Expect = 3.8e-38 Identity = 106/230 (46.09%), Postives = 139/230 (60.43%), Query Frame = 1
BLAST of Cp4.1LG08g05640.1 vs. TAIR10
Match: AT1G06850.1 (AT1G06850.1 basic leucine-zipper 52) HSP 1 Score: 131.7 bits (330), Expect = 7.7e-31 Identity = 103/233 (44.21%), Postives = 132/233 (56.65%), Query Frame = 1
BLAST of Cp4.1LG08g05640.1 vs. TAIR10
Match: AT1G43700.1 (AT1G43700.1 VIRE2-interacting protein 1) HSP 1 Score: 120.9 bits (302), Expect = 1.4e-27 Identity = 77/136 (56.62%), Postives = 90/136 (66.18%), Query Frame = 1
BLAST of Cp4.1LG08g05640.1 vs. NCBI nr
Match: gi|659077138|ref|XP_008439053.1| (PREDICTED: probable transcription factor PosF21 [Cucumis melo]) HSP 1 Score: 501.9 bits (1291), Expect = 8.1e-139 Identity = 273/307 (88.93%), Postives = 285/307 (92.83%), Query Frame = 1
BLAST of Cp4.1LG08g05640.1 vs. NCBI nr
Match: gi|449459834|ref|XP_004147651.1| (PREDICTED: probable transcription factor PosF21 [Cucumis sativus]) HSP 1 Score: 500.7 bits (1288), Expect = 1.8e-138 Identity = 271/307 (88.27%), Postives = 285/307 (92.83%), Query Frame = 1
BLAST of Cp4.1LG08g05640.1 vs. NCBI nr
Match: gi|659077162|ref|XP_008439065.1| (PREDICTED: probable transcription factor PosF21 [Cucumis melo]) HSP 1 Score: 444.5 bits (1142), Expect = 1.5e-121 Identity = 243/307 (79.15%), Postives = 264/307 (85.99%), Query Frame = 1
BLAST of Cp4.1LG08g05640.1 vs. NCBI nr
Match: gi|449459848|ref|XP_004147658.1| (PREDICTED: probable transcription factor PosF21 [Cucumis sativus]) HSP 1 Score: 434.1 bits (1115), Expect = 2.1e-118 Identity = 241/310 (77.74%), Postives = 263/310 (84.84%), Query Frame = 1
BLAST of Cp4.1LG08g05640.1 vs. NCBI nr
Match: gi|1009173021|ref|XP_015867590.1| (PREDICTED: probable transcription factor PosF21 [Ziziphus jujuba]) HSP 1 Score: 427.2 bits (1097), Expect = 2.5e-116 Identity = 237/309 (76.70%), Postives = 260/309 (84.14%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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