Cp4.1LG08g04590.1 (mRNA) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG08g04590.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	CASP-like protein
Location	Cp4.1LG08 : 1419136 .. 1420797 (-)
Sequence length	850

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACCTCCCAGCTCTTAATTTCCATTCATATTATAAATTTTATGTCCCACTTTCTTGGGAATCCAAACCCTAATCGTGTGGGAGAGGGAAGATGGAAGTGGTGAGAAGATCAGTGAAAAAGGAAGAAGAAGAAGAACAACAAGACATGAACAAGAACGTAATGGTTAACCATATGGCTCAAATGGGTTTTAGGGTTTTGGGATTTGTGTTGAGCTTAGTGGCAGCCATTGTCGTGGGACTCAACAAACAGTCCAAGGTTGTTCCTCTTACTGTCTCCCTCAACCTCCCTCCTTTGGATTATACTCTCACCGCTAACTGGCATTACTTGTCTGCTCTCGTGTAAGTCTTTTCTCTCTCCCGCTCCGTTTTTTCTTTCTATACCTTCATTTTCTTCTTCCGAGTTTAAATCGAACTCGGTACGAAGATTTGAATGTCTGCCCTTTTAAAACATGTTTGTTTTAATGTTTTTTTTCGATATTATCACTCAAATAGTGATTTCTTATGTTTTTTGTTTAGCTGAAGATTTAAACTCGTGACGGTTTAGTTGAAGATGATTAGTATGTTGAGGATTACATTGGTTAATTTAGTAGAAGATCATGAGTTTATAAGTGAGAAATACTATCTCTATTAGTATGAGACCTTTTCGGGAAGCCACGAGAGCTTATGCTGGTCAATATCATACCATCATCGAGAGTCATGATTCTTAACATAGTATCAAAGTCGTGCCCTAAACTTAGTCATGTCAAAAGTAACTAAAGTGTCGAACAAAGGGTTTACTTTGTTCGAGAGCTCTAGAGAAAGGAGTCGAGTCTCGATTAAGGGGGAGGCTATCTAGATTTAAACGTGATTTGTGGACGTCAATAAAATAAAGGAGGTGATATTATTTCGGGTTTTCAAAAAATTTAATTTTTAGGTAGAATTAGAATTAATAATAATTGAAAATAATGAATATGGTCGGATATTTGTTAAAAATATAAATACGGTCAACAGGTTAGTTTTTGTACTTTTACAAGCAAAATAATTAAACGTTTGGTGTTATATTGTGTTAAGTATAGCTATTATGAATTTGGCACCTTGACACGTTGGATATTCGTATACATATAGATAAACGTGAAGGTGGTATTGGATTAAAAGTGTATCGTGTTTTTTAGGTATCTTTTAGCGACGAATGTGATAGCATGTTCGTACAGCTTCCTATCGTTTGTTTTTATGTTAAAAAACAAGAACAAGGACAACATCTTAGCGTTATTGGTAATCGTTCTCGACACGGTGATGGTGGCGCTGCTCTTCTCCAGCAGCGGAGCTGCGGCAGCGGTCGGAGTCATTGCGTACCACGGGAACTCACACGTGCAATGGAATAAAGTGTGCGATGTATATGGTAGATTTTGCAAGCAAATGGCAGCGTCTACTGTGCTCTCTCTTGCTGGTGCTGTAGTATTTATGTTGCTAGTTGTGTTGGCTTCTGTGGGCCTCCAGAAGAGGCCCAAATAAATGGGCCGGGATTTGGGCCTATATTTAAAGCTTCTTCACAGCCCATCTAAATGGGCTTTGGCTCTGTTCCTCACAGCCCAATTTAAAGGTTAGGTTATCAGTTATGGAATTGAAAATGTTACAAGAAGACTATATATGCATTATATTTTTATTTATCTCAATCTCTTTTTCT

mRNA sequence

CACCTCCCAGCTCTTAATTTCCATTCATATTATAAATTTTATGTCCCACTTTCTTGGGAATCCAAACCCTAATCGTGTGGGAGAGGGAAGATGGAAGTGGTGAGAAGATCAGTGAAAAAGGAAGAAGAAGAAGAACAACAAGACATGAACAAGAACGTAATGGTTAACCATATGGCTCAAATGGGTTTTAGGGTTTTGGGATTTGTGTTGAGCTTAGTGGCAGCCATTGTCGTGGGACTCAACAAACAGTCCAAGGTTGTTCCTCTTACTGTCTCCCTCAACCTCCCTCCTTTGGATTATACTCTCACCGCTAACTGGCATTACTTGTCTGCTCTCGTGTATCTTTTAGCGACGAATGTGATAGCATGTTCGTACAGCTTCCTATCGTTTGTTTTTATGTTAAAAAACAAGAACAAGGACAACATCTTAGCGTTATTGGTAATCGTTCTCGACACGGTGATGGTGGCGCTGCTCTTCTCCAGCAGCGGAGCTGCGGCAGCGGTCGGAGTCATTGCGTACCACGGGAACTCACACGTGCAATGGAATAAAGTGTGCGATGTATATGGTAGATTTTGCAAGCAAATGGCAGCGTCTACTGTGCTCTCTCTTGCTGGTGCTGTAGTATTTATGTTGCTAGTTGTGTTGGCTTCTGTGGGCCTCCAGAAGAGGCCCAAATAAATGGGCCGGGATTTGGGCCTATATTTAAAGCTTCTTCACAGCCCATCTAAATGGGCTTTGGCTCTGTTCCTCACAGCCCAATTTAAAGGTTAGGTTATCAGTTATGGAATTGAAAATGTTACAAGAAGACTATATATGCATTATATTTTTATTTATCTCAATCTCTTTTTCT

Coding sequence (CDS)

ATGGAAGTGGTGAGAAGATCAGTGAAAAAGGAAGAAGAAGAAGAACAACAAGACATGAACAAGAACGTAATGGTTAACCATATGGCTCAAATGGGTTTTAGGGTTTTGGGATTTGTGTTGAGCTTAGTGGCAGCCATTGTCGTGGGACTCAACAAACAGTCCAAGGTTGTTCCTCTTACTGTCTCCCTCAACCTCCCTCCTTTGGATTATACTCTCACCGCTAACTGGCATTACTTGTCTGCTCTCGTGTATCTTTTAGCGACGAATGTGATAGCATGTTCGTACAGCTTCCTATCGTTTGTTTTTATGTTAAAAAACAAGAACAAGGACAACATCTTAGCGTTATTGGTAATCGTTCTCGACACGGTGATGGTGGCGCTGCTCTTCTCCAGCAGCGGAGCTGCGGCAGCGGTCGGAGTCATTGCGTACCACGGGAACTCACACGTGCAATGGAATAAAGTGTGCGATGTATATGGTAGATTTTGCAAGCAAATGGCAGCGTCTACTGTGCTCTCTCTTGCTGGTGCTGTAGTATTTATGTTGCTAGTTGTGTTGGCTTCTGTGGGCCTCCAGAAGAGGCCCAAATAA

Protein sequence

MEVVRRSVKKEEEEEQQDMNKNVMVNHMAQMGFRVLGFVLSLVAAIVVGLNKQSKVVPLTVSLNLPPLDYTLTANWHYLSALVYLLATNVIACSYSFLSFVFMLKNKNKDNILALLVIVLDTVMVALLFSSSGAAAAVGVIAYHGNSHVQWNKVCDVYGRFCKQMAASTVLSLAGAVVFMLLVVLASVGLQKRPK

Homology

[Close]

BLAST of Cp4.1LG08g04590.1 vs. Swiss-Prot
Match: CSPL5_SOYBN (CASP-like protein 1E2 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 8.8e-43
Identity = 95/182 (52.20%), Postives = 131/182 (71.98%), Query Frame = 1


Query: 12  EEEEQQDMNKNVMVNHMAQMGFRVLGFVLSLVAAIVVGLNKQSKVVPLTVSLNLPPLDYT 71
           E +E++ M    +   ++ +  R+L F ++LVAAIV+ ++KQ+KVVP+ +S +LPPLD  
Sbjct: 5   ESKEREVMVAKPVAVGVSDLLLRLLAFTVTLVAAIVIAVDKQTKVVPIQLSDSLPPLDVP 64

Query: 72  LTANWHYLSALVYLLATNVIACSYSFLSFVFMLKNKNKDNILALLVIVLDTVMVALLFSS 131
           LTA WH +SA+VY L TN IAC+Y+ LS +  L N+ K   L  L+ VLD  MVALLFS 
Sbjct: 65  LTAKWHQMSAIVYFLVTNAIACTYAVLSLLLALVNRGKSKGLWTLIAVLDAFMVALLFSG 124

Query: 132 SGAAAAVGVIAYHGNSHVQWNKVCDVYGRFCKQMAASTVLSLAGAVVFMLLVVLASVGLQ 191
           +GAAAAVGV+ Y GNSHV WNKVC+V+G+FC QMAAS  +SL G++ F+LLV++  V L 
Sbjct: 125 NGAAAAVGVLGYKGNSHVNWNKVCNVFGKFCDQMAASIGVSLIGSLAFLLLVIIPGVRLH 184

Query: 192 KR 194
           +R
Sbjct: 185 RR 186

[Close]

BLAST of Cp4.1LG08g04590.1 vs. Swiss-Prot
Match: CSPL6_SOYBN (CASP-like protein 1E1 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 1.3e-41
Identity = 94/183 (51.37%), Postives = 130/183 (71.04%), Query Frame = 1


Query: 11  EEEEEQQDMNKNVMVNHMAQMGFRVLGFVLSLVAAIVVGLNKQSKVVPLTVSLNLPPLDY 70
           E +E +  + K V V  +  +  R+L F ++LVAAIV+ ++KQ+K+VP+ +S + PPL+ 
Sbjct: 5   ESKEREVMVAKPVAVVGVCDLLLRLLAFTVTLVAAIVIAVDKQTKLVPIQLSDSFPPLNV 64

Query: 71  TLTANWHYLSALVYLLATNVIACSYSFLSFVFMLKNKNKDNILALLVIVLDTVMVALLFS 130
            LTA WH +SA VY L TN IAC+Y+ +S +  L N+ K   L  L+ VLDT MVALLFS
Sbjct: 65  PLTAKWHQMSAFVYFLVTNAIACTYAAMSLLLALVNRGKSKGLWTLIAVLDTFMVALLFS 124

Query: 131 SSGAAAAVGVIAYHGNSHVQWNKVCDVYGRFCKQMAASTVLSLAGAVVFMLLVVLASVGL 190
            +GAAAAVG++ Y GNSHV WNKVC+V+G+FC QMAAS  +SL G++ F+LLVV+  V L
Sbjct: 125 GNGAAAAVGILGYKGNSHVNWNKVCNVFGKFCDQMAASIGVSLIGSLAFLLLVVIPVVRL 184

Query: 191 QKR 194
            +R
Sbjct: 185 HRR 187

[Close]

BLAST of Cp4.1LG08g04590.1 vs. Swiss-Prot
Match: CSPL7_POPTR (CASP-like protein 1E1 OS=Populus trichocarpa GN=POPTRDRAFT_820934 PE=3 SV=2)

HSP 1 Score: 157.5 bits (397), Expect = 1.5e-37
Identity = 85/162 (52.47%), Postives = 118/162 (72.84%), Query Frame = 1


Query: 34  RVLGFVLSLVAAIVVGLNKQSKVVPLTVSLNLPPLDYTLTANWHYLSALVYLLATNVIAC 93
           RVL  VL+L AAIV+G++KQ+KVVP+ +   LP ++  ++A WHYLSA  Y +A+N IAC
Sbjct: 35  RVLALVLTLAAAIVLGVDKQTKVVPIKIVDTLPAINLPVSAKWHYLSAFTYSVASNAIAC 94

Query: 94  SYSFLSFVFMLKNKNKDNILALLVIVLDTVMVALLFSSSGAAAAVGVIAYHGNSHVQWNK 153
           SY+ LS V  +  K     +  +VIVLD +MVA+LFSS+GAA A+G++ Y GNSHV+W K
Sbjct: 95  SYAALSLVLAVSGKKG---IMSIVIVLDLLMVAMLFSSNGAALAIGLMGYQGNSHVRWTK 154

Query: 154 VCDVYGRFCKQMAASTVLSLAGAVVFMLLVVLASVGLQKRPK 196
           VC V+GRFC Q+A S  LSL G+++F+LLV + S+ L K+ K
Sbjct: 155 VCHVFGRFCNQVAVSISLSLLGSILFLLLVGITSLRLHKKSK 193

[Close]

BLAST of Cp4.1LG08g04590.1 vs. Swiss-Prot
Match: CSPL9_RICCO (CASP-like protein 1E1 OS=Ricinus communis GN=RCOM_0680180 PE=2 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 3.2e-37
Identity = 82/162 (50.62%), Postives = 117/162 (72.22%), Query Frame = 1


Query: 34  RVLGFVLSLVAAIVVGLNKQSKVVPLTVSLNLPPLDYTLTANWHYLSALVYLLATNVIAC 93
           RVL FVL+  AAIV G+N Q++ VP+ ++ ++PPL   + A WHYLSA V+ + +N IAC
Sbjct: 34  RVLAFVLTSTAAIVHGVNNQTETVPIQLTSSMPPLYVPVVAKWHYLSAFVFFVVSNAIAC 93

Query: 94  SYSFLSFVFMLKNKNKDNILALLVIVLDTVMVALLFSSSGAAAAVGVIAYHGNSHVQWNK 153
           SY+ +S +     K     +  +++ LD +MVALLFSS+GAA A+GV+ Y GNSHV+WNK
Sbjct: 94  SYAAISVMLSFCGKKS---MVPIILTLDLLMVALLFSSNGAATAIGVMGYKGNSHVKWNK 153

Query: 154 VCDVYGRFCKQMAASTVLSLAGAVVFMLLVVLASVGLQKRPK 196
           VC+V+G+FC Q+AAS VLSL G++VF+LLV+L +  L  + K
Sbjct: 154 VCNVFGKFCNQVAASVVLSLIGSIVFVLLVMLTAFRLHNKSK 192

[Close]

BLAST of Cp4.1LG08g04590.1 vs. Swiss-Prot
Match: CSPL5_VITVI (CASP-like protein 1E2 OS=Vitis vinifera GN=VIT_05s0020g01820 PE=2 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.6e-36
Identity = 81/160 (50.62%), Postives = 113/160 (70.62%), Query Frame = 1


Query: 34  RVLGFVLSLVAAIVVGLNKQSKVVPLTVSLNLPPLDYTLTANWHYLSALVYLLATNVIAC 93
           RV+   L+LVAA+++G++KQ+KVV L +   LPP+D  +TA W YLSA VY + +N IAC
Sbjct: 35  RVVALALTLVAAVLLGVDKQTKVVSLQLLPTLPPMDVPVTAKWRYLSAFVYFVVSNAIAC 94

Query: 94  SYSFLSFVFMLKNKNKDNILALLVIVLDTVMVALLFSSSGAAAAVGVIAYHGNSHVQWNK 153
           SY+ LS +  + N   +  L L + V+D VMVALLFSS+GAA A+G++ Y GNS V+W K
Sbjct: 95  SYAALSLLLSVGNSKGNKGLGLAITVMDLVMVALLFSSNGAAGAIGLMGYEGNSRVRWGK 154

Query: 154 VCDVYGRFCKQMAASTVLSLAGAVVFMLLVVLASVGLQKR 194
           VC+V+G+FC Q+A +  LS  G + F LLVV+A+  L KR
Sbjct: 155 VCNVFGKFCNQVAVALGLSFFGGLAFFLLVVMAAFALNKR 194

[Close]

BLAST of Cp4.1LG08g04590.1 vs. TrEMBL
Match: A0A0A0LAI6_CUCSA (CASP-like protein OS=Cucumis sativus GN=Csa_3G151490 PE=3 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 7.7e-70
Identity = 153/197 (77.66%), Postives = 165/197 (83.76%), Query Frame = 1


Query: 1   MEVVRRSVKKEEEEEQQDMNK--NVMVN-HMAQMGFRVLGFVLSLVAAIVVGLNKQSKVV 60
           MEV RR  K EEE + ++M K  N   N H  +M FRVLGFVLS VAAIVVGLN Q+KVV
Sbjct: 1   MEVERRRGKMEEERKNEEMKKMGNDYDNYHKVEMVFRVLGFVLSFVAAIVVGLNNQTKVV 60

Query: 61  PLTVSLNLPPLDYTLTANWHYLSALVYLLATNVIACSYSFLSFVFMLKNKNKDNILALLV 120
           PL VSLN PPLDYT  A WHYLSA VYLLATN+IACSYSFLS   +LKNK+KDNIL LL+
Sbjct: 61  PLAVSLNSPPLDYTFIAKWHYLSAFVYLLATNIIACSYSFLSLFLLLKNKSKDNILGLLI 120

Query: 121 IVLDTVMVALLFSSSGAAAAVGVIAYHGNSHVQWNKVCDVYGRFCKQMAASTVLSLAGAV 180
           IVLDTVMVALLFS SGAA AVGVIAY GN+HVQWNKVCD+YGRFCKQ+AASTVLSLAGAV
Sbjct: 121 IVLDTVMVALLFSGSGAAGAVGVIAYQGNTHVQWNKVCDIYGRFCKQVAASTVLSLAGAV 180

Query: 181 VFMLLVVLASVGLQKRP 195
           VFM LVVLASVGLQKRP
Sbjct: 181 VFMSLVVLASVGLQKRP 197

[Close]

BLAST of Cp4.1LG08g04590.1 vs. TrEMBL
Match: A0A0A0L8Y1_CUCSA (CASP-like protein OS=Cucumis sativus GN=Csa_3G151500 PE=3 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 6.8e-50
Identity = 109/163 (66.87%), Postives = 134/163 (82.21%), Query Frame = 1


Query: 34  RVLGFVLSLVAAIVVGLNKQSKVVPLTVSLNLPPLDYTLTANWHYLSALVYLLATNVIAC 93
           RVLGF+LSLVAAIV+G++K++KVVP+T+S NLPP    + A WHY+SA VYLLATNVIA 
Sbjct: 12  RVLGFLLSLVAAIVMGVDKETKVVPITISSNLPPFPIVVVAKWHYVSAFVYLLATNVIAS 71

Query: 94  SYSFLSFVFMLKNKNK-DNILALLVIVLDTVMVALLFSSSGAAAAVGVIAYHGNSHVQWN 153
           SY  LS +  L NKN+ +N+L LL+IVLDTV VALL S +GAA A+GV+ Y GNSHV WN
Sbjct: 72  SYGLLSLMLTLSNKNRSNNVLTLLIIVLDTVTVALLSSGTGAALAIGVMGYEGNSHVGWN 131

Query: 154 KVCDVYGRFCKQMAASTVLSLAGAVVFMLLVVLASVGLQKRPK 196
           KVCD +GRFCKQ+AAS +LSLAGA+VF+LL++LA VGL KR K
Sbjct: 132 KVCDTFGRFCKQVAASALLSLAGAIVFLLLLILALVGLLKRLK 174

[Close]

BLAST of Cp4.1LG08g04590.1 vs. TrEMBL
Match: A0A0R0F6M4_SOYBN (CASP-like protein OS=Glycine max GN=GLYMA_17G023100 PE=3 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 9.8e-41
Identity = 95/182 (52.20%), Postives = 131/182 (71.98%), Query Frame = 1


Query: 12  EEEEQQDMNKNVMVNHMAQMGFRVLGFVLSLVAAIVVGLNKQSKVVPLTVSLNLPPLDYT 71
           E +E++ M    +   ++ +  R+L F ++LVAAIV+ ++KQ+KVVP+ +S +LPPLD  
Sbjct: 5   ESKEREVMVAKPVAVGVSDLLLRLLAFTVTLVAAIVIAVDKQTKVVPIQLSDSLPPLDVP 64

Query: 72  LTANWHYLSALVYLLATNVIACSYSFLSFVFMLKNKNKDNILALLVIVLDTVMVALLFSS 131
           LTA WH +SA+VY L TN IAC+Y+ LS +  L N+ K   L  L+ VLD  MVALLFS 
Sbjct: 65  LTAKWHQMSAIVYFLVTNAIACTYAVLSLLLALVNRGKSKGLWTLIAVLDAFMVALLFSG 124

Query: 132 SGAAAAVGVIAYHGNSHVQWNKVCDVYGRFCKQMAASTVLSLAGAVVFMLLVVLASVGLQ 191
           +GAAAAVGV+ Y GNSHV WNKVC+V+G+FC QMAAS  +SL G++ F+LLV++  V L 
Sbjct: 125 NGAAAAVGVLGYKGNSHVNWNKVCNVFGKFCDQMAASIGVSLIGSLAFLLLVIIPGVRLH 184

Query: 192 KR 194
           +R
Sbjct: 185 RR 186

[Close]

BLAST of Cp4.1LG08g04590.1 vs. TrEMBL
Match: A0A0B2P761_GLYSO (CASP-like protein OS=Glycine soja GN=glysoja_004415 PE=3 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 9.8e-41
Identity = 95/182 (52.20%), Postives = 131/182 (71.98%), Query Frame = 1


Query: 12  EEEEQQDMNKNVMVNHMAQMGFRVLGFVLSLVAAIVVGLNKQSKVVPLTVSLNLPPLDYT 71
           E +E++ M    +   ++ +  R+L F ++LVAAIV+ ++KQ+KVVP+ +S +LPPLD  
Sbjct: 5   ESKEREVMVAKPVAVGVSDLLLRLLAFTVTLVAAIVIAVDKQTKVVPIQLSDSLPPLDVP 64

Query: 72  LTANWHYLSALVYLLATNVIACSYSFLSFVFMLKNKNKDNILALLVIVLDTVMVALLFSS 131
           LTA WH +SA+VY L TN IAC+Y+ LS +  L N+ K   L  L+ VLD  MVALLFS 
Sbjct: 65  LTAKWHQMSAIVYFLVTNAIACTYAVLSLLLALVNRGKSKGLWTLIAVLDAFMVALLFSG 124

Query: 132 SGAAAAVGVIAYHGNSHVQWNKVCDVYGRFCKQMAASTVLSLAGAVVFMLLVVLASVGLQ 191
           +GAAAAVGV+ Y GNSHV WNKVC+V+G+FC QMAAS  +SL G++ F+LLV++  V L 
Sbjct: 125 NGAAAAVGVLGYKGNSHVNWNKVCNVFGKFCDQMAASIGVSLIGSLAFLLLVIIPGVRLH 184

Query: 192 KR 194
           +R
Sbjct: 185 RR 186

[Close]

BLAST of Cp4.1LG08g04590.1 vs. TrEMBL
Match: A0A061ENJ4_THECC (CASP-like protein OS=Theobroma cacao GN=TCM_021142 PE=3 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 8.3e-40
Identity = 89/163 (54.60%), Postives = 125/163 (76.69%), Query Frame = 1


Query: 34  RVLGFVLSLVAAIVVGLNKQSKVVPLTVSLNLPPLDYTLTANWHYLSALVYLLATNVIAC 93
           RVL  +L+LVAAIV+G+NKQ+KVVP+ ++  LPPL+    A WHYLSA VY + +N+IAC
Sbjct: 110 RVLALLLTLVAAIVLGVNKQTKVVPIQIAPTLPPLNIEAQARWHYLSAFVYAMVSNIIAC 169

Query: 94  SYSFLSFVFMLKNKN-KDNILALLVIVLDTVMVALLFSSSGAAAAVGVIAYHGNSHVQWN 153
           SY+ +S + ++  +N K  +   ++++LD VMVALLFS++GAA A+G++ Y GNSHV+WN
Sbjct: 170 SYAAISILMVMGTRNAKKGLAQTVILLLDLVMVALLFSANGAAFAIGLMGYKGNSHVRWN 229

Query: 154 KVCDVYGRFCKQMAASTVLSLAGAVVFMLLVVLASVGLQKRPK 196
           KVC+V+ +FC Q+A   VLS+ G+V FMLLV LA+V LQKR K
Sbjct: 230 KVCNVFDKFCNQVAVFVVLSMLGSVAFMLLVALAAVTLQKRCK 272

[Close]

BLAST of Cp4.1LG08g04590.1 vs. TAIR10
Match: AT4G15630.1 (AT4G15630.1 Uncharacterised protein family (UPF0497))

HSP 1 Score: 142.9 bits (359), Expect = 2.1e-34
Identity = 80/162 (49.38%), Postives = 113/162 (69.75%), Query Frame = 1


Query: 30  QMGFRVLGFVLSLVAAIVVGLNKQSKVVPLTVSLNLPPLDYTLTANWHYLSALVYLLATN 89
           ++  RVL  VL++VAA V+G+ KQ+KVVP+ +   LPPL+ + TA   YLSA VY ++ N
Sbjct: 28  ELTMRVLALVLTMVAATVLGVAKQTKVVPIKLIPTLPPLNVSTTAKASYLSAFVYNISAN 87

Query: 90  VIACSYSFLSFVFMLKNKNK-DNILALLVIVLDTVMVALLFSSSGAAAAVGVIAYHGNSH 149
            IAC Y+ +S V ++ +K K    L + V++ D +MVALLFSS+GAA A+G++  HGN H
Sbjct: 88  AIACGYTAISIVIVMISKGKRSKSLLMAVLIGDLMMVALLFSSTGAAGAIGLMGRHGNKH 147

Query: 150 VQWNKVCDVYGRFCKQMAASTVLSLAGAVVFMLLVVLASVGL 191
           V W KVC V+G+FC Q A S  ++L  +VVFMLLVVL ++ L
Sbjct: 148 VMWKKVCGVFGKFCNQAAVSVAITLIASVVFMLLVVLDALKL 189

[Close]

BLAST of Cp4.1LG08g04590.1 vs. TAIR10
Match: AT4G15620.1 (AT4G15620.1 Uncharacterised protein family (UPF0497))

HSP 1 Score: 135.6 bits (340), Expect = 3.3e-32
Identity = 83/188 (44.15%), Postives = 119/188 (63.30%), Query Frame = 1


Query: 12  EEEEQQDMNKNVMVNHMAQMG--------FRVLGFVLSLVAAIVVGLNKQSKVVPLTVSL 71
           E E + +MN   M     ++G         RVL  +L++ AA V+G+ KQ+KVV + +  
Sbjct: 2   EHEGKNNMNGMEMEKGKRELGSRKGVELTMRVLALILTMAAATVLGVAKQTKVVSIKLIP 61

Query: 72  NLPPLDYTLTANWHYLSALVYLLATNVIACSYSFLSFVFMLKNKNKDNILALLVIVL-DT 131
            LPPLD T TA   YLSA VY ++ N IAC Y+ +S   ++ ++ + +   L+V++L D 
Sbjct: 62  TLPPLDITTTAKASYLSAFVYNISVNAIACGYTAISIAILMISRGRRSKKLLMVVLLGDL 121

Query: 132 VMVALLFSSSGAAAAVGVIAYHGNSHVQWNKVCDVYGRFCKQMAASTVLSLAGAVVFMLL 191
           VMVALLFS +GAA+A+G++  HGN HV W KVC V+G+FC + A S  L+L  AVVFM L
Sbjct: 122 VMVALLFSGTGAASAIGLMGLHGNKHVMWKKVCGVFGKFCHRAAPSLPLTLLAAVVFMFL 181

[Close]

BLAST of Cp4.1LG08g04590.1 vs. TAIR10
Match: AT4G20390.1 (AT4G20390.1 Uncharacterised protein family (UPF0497))

HSP 1 Score: 78.6 bits (192), Expect = 4.8e-15
Identity = 49/160 (30.63%), Postives = 90/160 (56.25%), Query Frame = 1


Query: 31  MGFRVLGFVLSLVAAIVVGLNKQSKVVPLTVSLNLPPLDYTLTANWHYLSALVYLLATNV 90
           +G R+  F+ +L AAIV+ LNK++K + +  ++   P+  TLTA + +  A V+ +  NV
Sbjct: 20  LGLRIFAFMATLAAAIVMSLNKETKTL-VVATIGTVPIKATLTAKFQHTPAFVFFVIANV 79

Query: 91  IACSYSFLSFVFMLKNKNKD--NILALLVIVLDTVMVALLFSSSGAAAAVGVIAYHGNSH 150
           +   ++ L  V  + ++  +   +  L + +LD +   L+ +++ AA  V  +  +GN H
Sbjct: 80  MVSFHNLLMIVVQIFSRKLEYKGLRLLSIAILDMLNATLVSAAANAAVFVAELGKNGNKH 139

Query: 151 VQWNKVCDVYGRFCKQMAASTVLSLAGAVVFMLLVVLASV 189
            +WNKVCD +  +C   A + + + AG V+ MLLV   S+
Sbjct: 140 AKWNKVCDRFTTYCDHGAGAIIAAFAG-VILMLLVSAVSI 177

[Close]

BLAST of Cp4.1LG08g04590.1 vs. TAIR10
Match: AT4G15610.1 (AT4G15610.1 Uncharacterised protein family (UPF0497))

HSP 1 Score: 74.3 bits (181), Expect = 9.1e-14
Identity = 49/170 (28.82%), Postives = 92/170 (54.12%), Query Frame = 1


Query: 28  MAQMGFRVLGFVLSLVAAIVVGLNKQSKVVPLT-VSLNLPPLDYTLTANWHYLSALVYLL 87
           M Q+  R + F  +L + +V+  +KQ+K + L    + +P  ++T +       AL+Y +
Sbjct: 28  MTQVVLRFVLFAATLTSIVVMVTSKQTKNIFLPGTPIRIPAAEFTNSP------ALIYFV 87

Query: 88  ATNVIACSYSFLSF---VFMLKNKNKDNILALLVIVLDTVMVALLFSSSGAAAAVGVIAY 147
               +AC YS +S    V   K  +   +L L + ++D VMV ++ S++GA   V  +  
Sbjct: 88  VALSVACFYSIVSTFVTVSAFKKHSCSAVLLLNLAIMDAVMVGIVASATGAGGGVAYLGL 147

Query: 148 HGNSHVQWNKVCDVYGRFCKQMAASTVLSLAGAVVFMLLVVLASVGLQKR 194
            GN  V+W K+C +Y +FC+ +  +  +SL  +VV +LL +++ + L K+
Sbjct: 148 KGNKEVRWGKICHIYDKFCRHVGGAIAVSLFASVVLLLLSIISVLSLYKK 191

[Close]

BLAST of Cp4.1LG08g04590.1 vs. TAIR10
Match: AT5G44550.1 (AT5G44550.1 Uncharacterised protein family (UPF0497))

HSP 1 Score: 73.9 bits (180), Expect = 1.2e-13
Identity = 48/166 (28.92%), Postives = 88/166 (53.01%), Query Frame = 1


Query: 31  MGFRVLGFVLSLVAAIVVGLNKQSKVVPLTVSLNLPPLDYTLTANWHYLSALVYLLATNV 90
           +G R+L F  +L AAIV+GLNK++K   +   +   P+  T TA + +  A V+ +  N 
Sbjct: 20  LGLRLLAFSATLSAAIVMGLNKETKTF-IVGKVGNTPIQATFTAKFDHTPAFVFFVVANA 79

Query: 91  IACSYSFLSFVFMLKNKNKD--NILALLVIVLDTVMVALLFSSSGAAAAVGVIAYHGNSH 150
           +   ++ L     +     +      L V +LD + V L+ +++ AAA +  +  +GN H
Sbjct: 80  MVSFHNLLMIALQIFGGKMEFTGFRLLSVAILDMLNVTLISAAANAAAFMAEVGKNGNKH 139

Query: 151 VQWNKVCDVYGRFCKQMAASTVLSLAGAVVFMLLVVLASVGLQKRP 195
            +W+K+CD +  +C   A + + + AG V+ ML++  AS+    +P
Sbjct: 140 ARWDKICDRFATYCDHGAGALIAAFAG-VILMLIISAASISRLVQP 183

[Close]

BLAST of Cp4.1LG08g04590.1 vs. NCBI nr
Match: gi|700201938|gb|KGN57071.1| (hypothetical protein Csa_3G151490 [Cucumis sativus])

HSP 1 Score: 271.6 bits (693), Expect = 1.1e-69
Identity = 153/197 (77.66%), Postives = 165/197 (83.76%), Query Frame = 1


Query: 1   MEVVRRSVKKEEEEEQQDMNK--NVMVN-HMAQMGFRVLGFVLSLVAAIVVGLNKQSKVV 60
           MEV RR  K EEE + ++M K  N   N H  +M FRVLGFVLS VAAIVVGLN Q+KVV
Sbjct: 1   MEVERRRGKMEEERKNEEMKKMGNDYDNYHKVEMVFRVLGFVLSFVAAIVVGLNNQTKVV 60

Query: 61  PLTVSLNLPPLDYTLTANWHYLSALVYLLATNVIACSYSFLSFVFMLKNKNKDNILALLV 120
           PL VSLN PPLDYT  A WHYLSA VYLLATN+IACSYSFLS   +LKNK+KDNIL LL+
Sbjct: 61  PLAVSLNSPPLDYTFIAKWHYLSAFVYLLATNIIACSYSFLSLFLLLKNKSKDNILGLLI 120

Query: 121 IVLDTVMVALLFSSSGAAAAVGVIAYHGNSHVQWNKVCDVYGRFCKQMAASTVLSLAGAV 180
           IVLDTVMVALLFS SGAA AVGVIAY GN+HVQWNKVCD+YGRFCKQ+AASTVLSLAGAV
Sbjct: 121 IVLDTVMVALLFSGSGAAGAVGVIAYQGNTHVQWNKVCDIYGRFCKQVAASTVLSLAGAV 180

Query: 181 VFMLLVVLASVGLQKRP 195
           VFM LVVLASVGLQKRP
Sbjct: 181 VFMSLVVLASVGLQKRP 197

[Close]

BLAST of Cp4.1LG08g04590.1 vs. NCBI nr
Match: gi|659076671|ref|XP_008438805.1| (PREDICTED: CASP-like protein 5 [Cucumis melo])

HSP 1 Score: 270.8 bits (691), Expect = 1.9e-69
Identity = 151/200 (75.50%), Postives = 164/200 (82.00%), Query Frame = 1


Query: 1   MEVVRRSVKKEEEEEQQDMNKNVMVN------HMAQMGFRVLGFVLSLVAAIVVGLNKQS 60
           +E  RR  K EEE + ++M K  M N      H  +M FRVLGFVLS VAAIVVGLN Q+
Sbjct: 3   VETERRRGKMEEERKNEEMKKIKMGNYYDNYYHKVEMVFRVLGFVLSFVAAIVVGLNNQT 62

Query: 61  KVVPLTVSLNLPPLDYTLTANWHYLSALVYLLATNVIACSYSFLSFVFMLKNKNKDNILA 120
           KVVPLTVSLN PPLDYT  A WHYLSA VYLLATN+IACSYSF+S   +LK K+KDNIL 
Sbjct: 63  KVVPLTVSLNTPPLDYTFIAKWHYLSAFVYLLATNIIACSYSFVSLFLLLKKKSKDNILG 122

Query: 121 LLVIVLDTVMVALLFSSSGAAAAVGVIAYHGNSHVQWNKVCDVYGRFCKQMAASTVLSLA 180
           LL+IVLDTVMVALLFS SGAA AVGVIAY GNSHVQWNKVCD+YGRFCKQ+AASTVLSLA
Sbjct: 123 LLIIVLDTVMVALLFSGSGAAGAVGVIAYQGNSHVQWNKVCDIYGRFCKQVAASTVLSLA 182

Query: 181 GAVVFMLLVVLASVGLQKRP 195
           GAVVFM LVVLASVGLQKRP
Sbjct: 183 GAVVFMSLVVLASVGLQKRP 202

[Close]

BLAST of Cp4.1LG08g04590.1 vs. NCBI nr
Match: gi|449432803|ref|XP_004134188.1| (PREDICTED: CASP-like protein 1E2 [Cucumis sativus])

HSP 1 Score: 263.8 bits (673), Expect = 2.3e-67
Identity = 143/186 (76.88%), Postives = 157/186 (84.41%), Query Frame = 1


Query: 9   KKEEEEEQQDMNKNVMVNHMAQMGFRVLGFVLSLVAAIVVGLNKQSKVVPLTVSLNLPPL 68
           ++ + EE + M  +    H  +M FRVLGFVLS VAAIVVGLN Q+KVVPL VSLN PPL
Sbjct: 3   EERKNEEMKKMGNDYDNYHKVEMVFRVLGFVLSFVAAIVVGLNNQTKVVPLAVSLNSPPL 62

Query: 69  DYTLTANWHYLSALVYLLATNVIACSYSFLSFVFMLKNKNKDNILALLVIVLDTVMVALL 128
           DYT  A WHYLSA VYLLATN+IACSYSFLS   +LKNK+KDNIL LL+IVLDTVMVALL
Sbjct: 63  DYTFIAKWHYLSAFVYLLATNIIACSYSFLSLFLLLKNKSKDNILGLLIIVLDTVMVALL 122

Query: 129 FSSSGAAAAVGVIAYHGNSHVQWNKVCDVYGRFCKQMAASTVLSLAGAVVFMLLVVLASV 188
           FS SGAA AVGVIAY GN+HVQWNKVCD+YGRFCKQ+AASTVLSLAGAVVFM LVVLASV
Sbjct: 123 FSGSGAAGAVGVIAYQGNTHVQWNKVCDIYGRFCKQVAASTVLSLAGAVVFMSLVVLASV 182

Query: 189 GLQKRP 195
           GLQKRP
Sbjct: 183 GLQKRP 188

[Close]

BLAST of Cp4.1LG08g04590.1 vs. NCBI nr
Match: gi|659076673|ref|XP_008438806.1| (PREDICTED: CASP-like protein 6 [Cucumis melo])

HSP 1 Score: 207.2 bits (526), Expect = 2.6e-50
Identity = 111/163 (68.10%), Postives = 133/163 (81.60%), Query Frame = 1


Query: 34  RVLGFVLSLVAAIVVGLNKQSKVVPLTVSLNLPPLDYTLTANWHYLSALVYLLATNVIAC 93
           RVLGF+LSLVAAIVVG++K++KVVP+T+S NLPP    + A W YLSA VY  ATNVIA 
Sbjct: 12  RVLGFLLSLVAAIVVGVDKETKVVPVTISSNLPPFPIVVVAKWRYLSAFVYFFATNVIAS 71

Query: 94  SYSFLSFVFMLKNKN-KDNILALLVIVLDTVMVALLFSSSGAAAAVGVIAYHGNSHVQWN 153
            Y  LS +  L NKN  +N+L LLVIVLDTV VALL S +GAA A+GVIAY GNSHV+WN
Sbjct: 72  LYGLLSLMLTLSNKNGSNNVLTLLVIVLDTVSVALLSSGAGAAMAIGVIAYEGNSHVRWN 131

Query: 154 KVCDVYGRFCKQMAASTVLSLAGAVVFMLLVVLASVGLQKRPK 196
           KVCD++G+FCKQ+AAS +LSLAGA+VF+LLV+LA VGL KRPK
Sbjct: 132 KVCDIFGKFCKQVAASALLSLAGAIVFLLLVILALVGLLKRPK 174

[Close]

BLAST of Cp4.1LG08g04590.1 vs. NCBI nr
Match: gi|449432805|ref|XP_004134189.1| (PREDICTED: CASP-like protein 1E1 [Cucumis sativus])

HSP 1 Score: 205.3 bits (521), Expect = 9.7e-50
Identity = 109/163 (66.87%), Postives = 134/163 (82.21%), Query Frame = 1


Query: 34  RVLGFVLSLVAAIVVGLNKQSKVVPLTVSLNLPPLDYTLTANWHYLSALVYLLATNVIAC 93
           RVLGF+LSLVAAIV+G++K++KVVP+T+S NLPP    + A WHY+SA VYLLATNVIA 
Sbjct: 12  RVLGFLLSLVAAIVMGVDKETKVVPITISSNLPPFPIVVVAKWHYVSAFVYLLATNVIAS 71

Query: 94  SYSFLSFVFMLKNKNK-DNILALLVIVLDTVMVALLFSSSGAAAAVGVIAYHGNSHVQWN 153
           SY  LS +  L NKN+ +N+L LL+IVLDTV VALL S +GAA A+GV+ Y GNSHV WN
Sbjct: 72  SYGLLSLMLTLSNKNRSNNVLTLLIIVLDTVTVALLSSGTGAALAIGVMGYEGNSHVGWN 131

Query: 154 KVCDVYGRFCKQMAASTVLSLAGAVVFMLLVVLASVGLQKRPK 196
           KVCD +GRFCKQ+AAS +LSLAGA+VF+LL++LA VGL KR K
Sbjct: 132 KVCDTFGRFCKQVAASALLSLAGAIVFLLLLILALVGLLKRLK 174

The following BLAST results are available for this feature:

BLAST of Cp4.1LG08g04590.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CSPL5_SOYBN	8.8e-43	52.20	CASP-like protein 1E2 OS=Glycine max PE=2 SV=1	[more]
CSPL6_SOYBN	1.3e-41	51.37	CASP-like protein 1E1 OS=Glycine max PE=2 SV=1	[more]
CSPL7_POPTR	1.5e-37	52.47	CASP-like protein 1E1 OS=Populus trichocarpa GN=POPTRDRAFT_820934 PE=3 SV=2	[more]
CSPL9_RICCO	3.2e-37	50.62	CASP-like protein 1E1 OS=Ricinus communis GN=RCOM_0680180 PE=2 SV=1	[more]
CSPL5_VITVI	1.6e-36	50.63	CASP-like protein 1E2 OS=Vitis vinifera GN=VIT_05s0020g01820 PE=2 SV=1	[more]

BLAST of Cp4.1LG08g04590.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LAI6_CUCSA	7.7e-70	77.66	CASP-like protein OS=Cucumis sativus GN=Csa_3G151490 PE=3 SV=1	[more]
A0A0A0L8Y1_CUCSA	6.8e-50	66.87	CASP-like protein OS=Cucumis sativus GN=Csa_3G151500 PE=3 SV=1	[more]
A0A0R0F6M4_SOYBN	9.8e-41	52.20	CASP-like protein OS=Glycine max GN=GLYMA_17G023100 PE=3 SV=1	[more]
A0A0B2P761_GLYSO	9.8e-41	52.20	CASP-like protein OS=Glycine soja GN=glysoja_004415 PE=3 SV=1	[more]
A0A061ENJ4_THECC	8.3e-40	54.60	CASP-like protein OS=Theobroma cacao GN=TCM_021142 PE=3 SV=1	[more]

BLAST of Cp4.1LG08g04590.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G15630.1	2.1e-34	49.38	Uncharacterised protein family (UPF0497)	[more]
AT4G15620.1	3.3e-32	44.15	Uncharacterised protein family (UPF0497)	[more]
AT4G20390.1	4.8e-15	30.63	Uncharacterised protein family (UPF0497)	[more]
AT4G15610.1	9.1e-14	28.82	Uncharacterised protein family (UPF0497)	[more]
AT5G44550.1	1.2e-13	28.92	Uncharacterised protein family (UPF0497)	[more]

BLAST of Cp4.1LG08g04590.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700201938\|gb\|KGN57071.1\|	1.1e-69	77.66	hypothetical protein Csa_3G151490 [Cucumis sativus]	[more]
gi\|659076671\|ref\|XP_008438805.1\|	1.9e-69	75.50	PREDICTED: CASP-like protein 5 [Cucumis melo]	[more]
gi\|449432803\|ref\|XP_004134188.1\|	2.3e-67	76.88	PREDICTED: CASP-like protein 1E2 [Cucumis sativus]	[more]
gi\|659076673\|ref\|XP_008438806.1\|	2.6e-50	68.10	PREDICTED: CASP-like protein 6 [Cucumis melo]	[more]
gi\|449432805\|ref\|XP_004134189.1\|	9.7e-50	66.87	PREDICTED: CASP-like protein 1E1 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR006702	CASP_dom
IPR006459	CASP/CASPL

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG08g04590	Cp4.1LG08g04590	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG08g04590.1:five_prime_utr:001	Cp4.1LG08g04590.1:five_prime_utr:001	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG08g04590.1:cds:001	Cp4.1LG08g04590.1:cds:001	CDS
Cp4.1LG08g04590.1:cds:002	Cp4.1LG08g04590.1:cds:002	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG08g04590.1:three_prime_utr:001	Cp4.1LG08g04590.1:three_prime_utr:001	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG08g04590.1	Cp4.1LG08g04590.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006459	Casparian strip membrane protein	TIGRFAMs	TIGR01569	TIGR01569	coord: 32..187 score: 3.8
IPR006702	Domain of unknown function DUF588	PFAM	PF04535	DUF588	coord: 27..178 score: 5.7
None	No IPR available	PANTHER	PTHR11615	NITRATE, FROMATE, IRON DEHYDROGENASE	coord: 11..193 score: 3.3
None	No IPR available	PANTHER	PTHR11615:SF150	SUBFAMILY NOT NAMED	coord: 11..193 score: 3.3