Cp4.1LG08g02930.1 (mRNA) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG08g02930.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	BnaC04g55730D protein
Location	Cp4.1LG08 : 2454018 .. 2455871 (+)
Sequence length	582

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGTTTCCGAAAGCAAATCTACATTCTTCTCGAGCGTAAACAGCGAGAGCCTTAAGGAGCTAGCAAAACTGCCGGAATCTTTCGTACCACAGAGGACGGTGAAGGTAACGAGTTTTGCCTCAGTTTTTTCTCTGTCTGCCTGTCAATTGGAGTTTTAGATTGCGTTTATTTAGGTCTGATTTTTCGATCGGACGTAGAAAATTGAAATGAGAAGATGATCGATGAAATTCAATGGTGATTTTAACTTCGGTGACGATTTGGTTTCTTCTTCTTTATTTTTATACGGCTTTAAAAAACTATTTATTGATGAATCTTTAATTTCATGTGAATTATGCGAAATACTGAGAGGAAAAAGGGGGAAATGAAATTTAGAGTGTTAGGAAAGCCATTGATTCCGTTCTTTATACACAGGGGAAGTCCACGCCCTTCTCCTCACTGCAGGGTCCAAGGGATGCAAATAGCTCCATGAATAAACCGATTGGAATTCATTATGAGACGGATTCCCAGACAGAATCAGCTATTTCAAAGGTGCTTTTTGAAGAGTTCAAGCGTTCTGAACCAAACCAAAGTGAAAGCTCAGTTTTAAGCGGTGCTAGTGAAGCAGATATCTTCAGTACAGATGATATGCTAGAATCGAGGAAAAGAAAGATGTTAAGTGAAGGCTTTGCTTCCACTACCCCATGTAATTGGCTTACTCTCGTATGCTATGAAGATTTTGTGTTTGAATAGCTGATGATACTTGAACTTTGTTAACTTTTACCATCAGGTGAGAGCCAAGCGAGGAAGAAGAATGTGGTAGTTCTTGGAGGCGACCCAAAACCCGAGAAAAAGAGAAGGGAGGCGGTTCATGATATCAGAAACAAAAAACCAAAACCTCTCTACAATCACTGTAAGTATTTGCCATCTTCTAAATACGCTTTTGTTTCTCATATGAATTGCCTCCTTCTCCCTTTGCTCGGATTTTAAACTGTGATGTCCATATTGGTTGGGGAGGAGAACAAACCACTATTTATAAGGGTGTGGAAACTTTCCCCTAGCTGGCGCGTTTTAAAGCCTTGAGTGAAAACCCAAAGAGGACAATATCTGCTAGCAGTAGACTTGAGCCGTTACAGATGGTATAAGAGTCATACACCGGACGGTGTGTCAGCCTTCTCGCTGTTCCTCAAAGGGGGTAGACACGAGGCGGTGTGCCAGTAAGGACGCCGGCCCCAAAGGGGTGGATTTGGGGGCGGTCCCACATCAATGGGAGGAAGGAAAGAGTGCCAGCGAGGACGCTTGTCTTGAAGGGGGTGGATTGTGATGTCCCTCGAGGGAAAGCCCGAAAAAGAAACCCCAAAGAGAACAATATTTGCTAGCGGTAGCTATGTATTCTAAACTTAGGTTTAGATCAGTAATATATTTAAATTTTTTAAAACTAATTTGATTTATATGATTAAATTTATGTTTAATTTAATCCTGTATTTTGAGAAAGGTTAAAATAAAAAATTCAAAAACTTATTAGAATCCATTAAATACCATTTAAAAGATTTACCATCAAATAGATAGAAATTTTAAAATTTAAGAATTTATCGAACCAAATAAGGTTGGAGGTTAAAAAATAGTTTTTTAAAGGTAAAAGTTTAAAGAATAAAAGTACATATTTACAGTTATATATGGTAACTTCTTCGGTTTAAACTGTTTTATTAACCTTGTGATTCATGGTAACTTCTTGATTTCGGCAACTGAGCAGACGCAAGTGGCGGTGGGTGGTGGGACTGCGACATGGAAGGTGTTGATAGCGAAGAGGTTGGGCTTGGTGAAGTATGGGAAGGAGTTGGGTCTACTACGCTTGGAGGAATAGAATGGCATTGA

mRNA sequence

ATGAACGAGAGCCTTAAGGAGCTAGCAAAACTGCCGGAATCTTTCGTACCACAGAGGACGGTGAAGGGGAAGTCCACGCCCTTCTCCTCACTGCAGGGTCCAAGGGATGCAAATAGCTCCATGAATAAACCGATTGGAATTCATTATGAGACGGATTCCCAGACAGAATCAGCTATTTCAAAGGTGCTTTTTGAAGAGTTCAAGCGTTCTGAACCAAACCAAAGTGAAAGCTCAGTTTTAAGCGGTGCTAGTGAAGCAGATATCTTCAGTACAGATGATATGCTAGAATCGAGGAAAAGAAAGATGTTAAGTGAAGGCTTTGCTTCCACTACCCCATGTGAGAGCCAAGCGAGGAAGAAGAATGTGGTAGTTCTTGGAGGCGACCCAAAACCCGAGAAAAAGAGAAGGGAGGCGGTTCATGATATCAGAAACAAAAAACCAAAACCTCTCTACAATCACTACGCAAGTGGCGGTGGGTGGTGGGACTGCGACATGGAAGGTGTTGATAGCGAAGAGGTTGGGCTTGGTGAAGTATGGGAAGGAGTTGGGTCTACTACGCTTGGAGGAATAGAATGGCATTGA

Coding sequence (CDS)

ATGAACGAGAGCCTTAAGGAGCTAGCAAAACTGCCGGAATCTTTCGTACCACAGAGGACGGTGAAGGGGAAGTCCACGCCCTTCTCCTCACTGCAGGGTCCAAGGGATGCAAATAGCTCCATGAATAAACCGATTGGAATTCATTATGAGACGGATTCCCAGACAGAATCAGCTATTTCAAAGGTGCTTTTTGAAGAGTTCAAGCGTTCTGAACCAAACCAAAGTGAAAGCTCAGTTTTAAGCGGTGCTAGTGAAGCAGATATCTTCAGTACAGATGATATGCTAGAATCGAGGAAAAGAAAGATGTTAAGTGAAGGCTTTGCTTCCACTACCCCATGTGAGAGCCAAGCGAGGAAGAAGAATGTGGTAGTTCTTGGAGGCGACCCAAAACCCGAGAAAAAGAGAAGGGAGGCGGTTCATGATATCAGAAACAAAAAACCAAAACCTCTCTACAATCACTACGCAAGTGGCGGTGGGTGGTGGGACTGCGACATGGAAGGTGTTGATAGCGAAGAGGTTGGGCTTGGTGAAGTATGGGAAGGAGTTGGGTCTACTACGCTTGGAGGAATAGAATGGCATTGA

Protein sequence

MNESLKELAKLPESFVPQRTVKGKSTPFSSLQGPRDANSSMNKPIGIHYETDSQTESAISKVLFEEFKRSEPNQSESSVLSGASEADIFSTDDMLESRKRKMLSEGFASTTPCESQARKKNVVVLGGDPKPEKKRREAVHDIRNKKPKPLYNHYASGGGWWDCDMEGVDSEEVGLGEVWEGVGSTTLGGIEWH

Homology

[Close]

BLAST of Cp4.1LG08g02930.1 vs. TrEMBL
Match: A0A0A0L7Z9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G132540 PE=4 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 2.0e-70
Identity = 140/184 (76.09%), Postives = 153/184 (83.15%), Query Frame = 1


Query: 10  KLPESFVPQRTVKGKSTPFSSLQGPRDANSSMNKPIGIHYETDSQTESAISKVLFEEFKR 69
           KLPE+ VPQRTVKGKSTPFSSLQGPR++N   N PI I   TDSQTESAISKVLFE+FKR
Sbjct: 55  KLPETSVPQRTVKGKSTPFSSLQGPRNSN---NAPIAIDCGTDSQTESAISKVLFEQFKR 114

Query: 70  SEPNQSESSVLSGASEADIFSTDDMLESRKRKMLSEGFASTTPCESQARKKNVVVLGGDP 129
           SEPNQ E  V   ASE DIF+TD +L+SRKRK  +EG  STTPCESQ RK NVVV+GGDP
Sbjct: 115 SEPNQCECLVPGSASERDIFNTDGILDSRKRKKSNEGIISTTPCESQTRKMNVVVIGGDP 174

Query: 130 KPEKKRREAVHDIRNKKPKPLYNHYASGGGWWDCDMEGVDSEEVGLGEVWEGVGSTTLGG 189
           KP++K  E +   RNKKPKPLYNHYASG GWWD +MEGVDSEEVGLGEVWEGVGSTTLGG
Sbjct: 175 KPDQKGTEPIPIARNKKPKPLYNHYASGSGWWDSNMEGVDSEEVGLGEVWEGVGSTTLGG 234

Query: 190 IEWH 194
           IEWH
Sbjct: 235 IEWH 235

[Close]

BLAST of Cp4.1LG08g02930.1 vs. TrEMBL
Match: A0A061EKF3_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_020356 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 6.5e-29
Identity = 85/185 (45.95%), Postives = 106/185 (57.30%), Query Frame = 1


Query: 10  KLPESFVPQRTVKGKSTPFSSLQGPRDANSSMNKPIGIHYETDSQTESAISKVLFEEFKR 69
           KLP S    +TV+ KS PFSSL   R    S+NK      E + + +  I KV+FE+FK+
Sbjct: 53  KLPRSSGIPKTVQEKSRPFSSLL-LRKEGDSVNKHNESKKEEEIEKKDVIDKVVFEQFKQ 112

Query: 70  SEPNQSESSVLSGASEADIFSTDDMLESRKRKMLSEGFASTTPCESQARKKNVVVLGGDP 129
               + +  V SG    +    +    S KR+   EG       E    ++  +VLG DP
Sbjct: 113 DSTEKVDCMVSSGGVGEEEEKEET---SSKRQNPFEGLV-----EEHRTRRPFLVLGDDP 172

Query: 130 KPEKKRREAVHDIRNKKPKPLYNHYASGGGWWDCDMEGVDSEEVGLGEVWEGVGSTTLGG 189
              KKR      + NKKPKP YNHYA+G GWWDCDMEGVDSEEVG GE+WEGVGSTT GG
Sbjct: 173 PKPKKRGRRECSLSNKKPKPHYNHYANGCGWWDCDMEGVDSEEVGSGEIWEGVGSTTFGG 228

Query: 190 I-EWH 194
           I +WH
Sbjct: 233 IVDWH 228

[Close]

BLAST of Cp4.1LG08g02930.1 vs. TrEMBL
Match: A0A067FD53_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g026914mg PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.1e-28
Identity = 81/184 (44.02%), Postives = 107/184 (58.15%), Query Frame = 1


Query: 10  KLPESFVPQRTVKGKSTPFSSLQGPRDANSSMNKPIGIHYETDSQTESAISKVLFEEFKR 69
           KL +S V  +TV+GKS PF +  G R++  + N   G+    + +  + + KV+ E+FK 
Sbjct: 56  KLHKSSVLPKTVQGKSCPFLTPVGSRNSAGTTNGQTGVKKVEEKERSNVLDKVVLEQFKH 115

Query: 70  SEPNQSESSVLSGASEADIFSTDDMLESRKRKMLSEGFASTTPCESQARKKNVVVLGGDP 129
           +     ++  +S + E +I    +  ESRKRK   E     T       +K  VVLG D 
Sbjct: 116 TSKGDDDTCPIS-SDEIEIPDEYNAKESRKRKHPFEDVQKHTT------RKPFVVLGEDS 175

Query: 130 KPEKKRREAVHDIRNKKPKPLYNHYASGGGWWDCDMEGVDSEEVGLGEVWEGVGSTTLGG 189
           K ++K R     I NKK +P YNHYA+G GWWD DMEGVDSE VG GE WEGVGSTT GG
Sbjct: 176 KSKQKGR-GESSITNKKSRPCYNHYANGFGWWDSDMEGVDSEAVGYGEAWEGVGSTTFGG 231

Query: 190 IEWH 194
           IEWH
Sbjct: 236 IEWH 231

[Close]

BLAST of Cp4.1LG08g02930.1 vs. TrEMBL
Match: V4S1E5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005791mg PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 4.2e-28
Identity = 80/184 (43.48%), Postives = 105/184 (57.07%), Query Frame = 1


Query: 10  KLPESFVPQRTVKGKSTPFSSLQGPRDANSSMNKPIGIHYETDSQTESAISKVLFEEFKR 69
           KL +S V  +TV+GKS PF +  G R++  + N   G+    + +  + + K + E+FK 
Sbjct: 56  KLHKSSVLPKTVQGKSCPFLTPVGSRNSAGTTNGQTGVKKVEEKERSNVLDKAVLEQFKH 115

Query: 70  SEPNQSESSVLSGASEADIFSTDDMLESRKRKMLSEGFASTTPCESQARKKNVVVLGGDP 129
           +     ++  +S   E +I    +  ESRKRK   E     T       +K  VVLG D 
Sbjct: 116 TSKGDDDTCPIS-IDEIEIPDEYNAKESRKRKKPFEDVQKHTT------RKPFVVLGEDS 175

Query: 130 KPEKKRREAVHDIRNKKPKPLYNHYASGGGWWDCDMEGVDSEEVGLGEVWEGVGSTTLGG 189
           K ++K R     I NKK +P YNHYA+G GWWD DMEGVDSE VG GE WEGVGSTT GG
Sbjct: 176 KSKQKGR-GESSITNKKSRPCYNHYANGFGWWDSDMEGVDSEAVGYGEAWEGVGSTTFGG 231

Query: 190 IEWH 194
           IEWH
Sbjct: 236 IEWH 231

[Close]

BLAST of Cp4.1LG08g02930.1 vs. TrEMBL
Match: A0A067JC55_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06404 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 5.5e-28
Identity = 84/207 (40.58%), Postives = 117/207 (56.52%), Query Frame = 1


Query: 10  KLPESFVPQRTVKGKSTPFSSLQGPRDANSSMNKPIGIHYETDSQTESAISKVLFEEFKR 69
           KL  + V  + VKGKS PF S  GP+D   S++  I I  + + +T S + +V+FE+FK 
Sbjct: 55  KLQTNSVLPKIVKGKSRPFKSPVGPKDDGGSIDHWIAIK-KKEKETNSVVDQVIFEQFKH 114

Query: 70  SEPNQ------------------SESSVLSGASEADIF-----STDDMLESRKRKMLSEG 129
           +  ++                    SS L G   + +      ++++  E+RKR+   E 
Sbjct: 115 TSADKVDGIGSCADGRGAADGAIGTSSALLGIGSSHVLEIGTSNSNNEQETRKRRNPFED 174

Query: 130 FASTTPCESQARKKNVVVLGGDPKPEKKRREAVHDIRNKKPKPLYNHYASGGGWWDCDME 189
                    QA +K+ +VLG   +P++K R     + NKK +PLYNHYA+G GWWDC ME
Sbjct: 175 GDG-----KQAIRKHSLVLGDCAEPKQKVRSK-RFLSNKKARPLYNHYANGCGWWDCGME 234

Query: 190 GVDSEEVGLGEVWEGVGSTTLGGIEWH 194
           GVDSEEVG GE+WEGVGSTT GGIEWH
Sbjct: 235 GVDSEEVGFGEIWEGVGSTTFGGIEWH 254

[Close]

BLAST of Cp4.1LG08g02930.1 vs. TAIR10
Match: AT4G13690.1 (AT4G13690.1 unknown protein)

HSP 1 Score: 101.7 bits (252), Expect = 5.3e-22
Identity = 59/112 (52.68%), Postives = 71/112 (63.39%), Query Frame = 1


Query: 87  DIFSTDDMLESRKRKMLSEGFASTTPCESQARKKNVVVLGGD----PKPEKKRREAVHDI 146
           DI   DD   S+KRK   EG       ES +R    V++ GD     KP ++ RE   + 
Sbjct: 145 DIIVRDDKT-SKKRKDPFEGM------ESMSRTGKSVMVFGDNSKVSKPMQRERERRSNN 204

Query: 147 RNKKPKPLYNHYASGGGWWDCDMEGVDSEEVGLGEVWEGVGSTTLGGI-EWH 194
            +KK +P+YNHYA+G GWWDCDMEGVDSEEVG  EVWEGVGSTT G I +WH
Sbjct: 205 NSKKQRPIYNHYANGSGWWDCDMEGVDSEEVGHREVWEGVGSTTFGDIVDWH 249

[Close]

BLAST of Cp4.1LG08g02930.1 vs. NCBI nr
Match: gi|659075873|ref|XP_008438377.1| (PREDICTED: uncharacterized protein LOC103483493 [Cucumis melo])

HSP 1 Score: 276.6 bits (706), Expect = 3.4e-71
Identity = 141/184 (76.63%), Postives = 155/184 (84.24%), Query Frame = 1


Query: 10  KLPESFVPQRTVKGKSTPFSSLQGPRDANSSMNKPIGIHYETDSQTESAISKVLFEEFKR 69
           KLPE+ VPQRTVKGKSTPFSSLQGPR++N   N PI I   TDSQTESAISKVLFE+FKR
Sbjct: 55  KLPETSVPQRTVKGKSTPFSSLQGPRNSN---NAPIAIDCGTDSQTESAISKVLFEQFKR 114

Query: 70  SEPNQSESSVLSGASEADIFSTDDMLESRKRKMLSEGFASTTPCESQARKKNVVVLGGDP 129
           SEP+Q E  V   ASE DIF+TDD+LESRKRK  +EGF STTPCESQ RK NVVV+GGDP
Sbjct: 115 SEPSQCEYLVSGSASERDIFNTDDILESRKRKKSNEGFISTTPCESQTRKMNVVVIGGDP 174

Query: 130 KPEKKRREAVHDIRNKKPKPLYNHYASGGGWWDCDMEGVDSEEVGLGEVWEGVGSTTLGG 189
           +PE+K  + +   RNKKPKPLYNHYASG GWWD +MEGVDSEEVGLGEVWEGVGSTTLGG
Sbjct: 175 RPEQKGMQPIPIARNKKPKPLYNHYASGSGWWDSNMEGVDSEEVGLGEVWEGVGSTTLGG 234

Query: 190 IEWH 194
           IEWH
Sbjct: 235 IEWH 235

[Close]

BLAST of Cp4.1LG08g02930.1 vs. NCBI nr
Match: gi|449432440|ref|XP_004134007.1| (PREDICTED: uncharacterized protein LOC101216371 [Cucumis sativus])

HSP 1 Score: 273.5 bits (698), Expect = 2.9e-70
Identity = 140/184 (76.09%), Postives = 153/184 (83.15%), Query Frame = 1


Query: 10  KLPESFVPQRTVKGKSTPFSSLQGPRDANSSMNKPIGIHYETDSQTESAISKVLFEEFKR 69
           KLPE+ VPQRTVKGKSTPFSSLQGPR++N   N PI I   TDSQTESAISKVLFE+FKR
Sbjct: 55  KLPETSVPQRTVKGKSTPFSSLQGPRNSN---NAPIAIDCGTDSQTESAISKVLFEQFKR 114

Query: 70  SEPNQSESSVLSGASEADIFSTDDMLESRKRKMLSEGFASTTPCESQARKKNVVVLGGDP 129
           SEPNQ E  V   ASE DIF+TD +L+SRKRK  +EG  STTPCESQ RK NVVV+GGDP
Sbjct: 115 SEPNQCECLVPGSASERDIFNTDGILDSRKRKKSNEGIISTTPCESQTRKMNVVVIGGDP 174

Query: 130 KPEKKRREAVHDIRNKKPKPLYNHYASGGGWWDCDMEGVDSEEVGLGEVWEGVGSTTLGG 189
           KP++K  E +   RNKKPKPLYNHYASG GWWD +MEGVDSEEVGLGEVWEGVGSTTLGG
Sbjct: 175 KPDQKGTEPIPIARNKKPKPLYNHYASGSGWWDSNMEGVDSEEVGLGEVWEGVGSTTLGG 234

Query: 190 IEWH 194
           IEWH
Sbjct: 235 IEWH 235

[Close]

BLAST of Cp4.1LG08g02930.1 vs. NCBI nr
Match: gi|225433444|ref|XP_002283374.1| (PREDICTED: uncharacterized protein LOC100266687 isoform X5 [Vitis vinifera])

HSP 1 Score: 145.2 bits (365), Expect = 1.2e-31
Identity = 82/184 (44.57%), Postives = 113/184 (61.41%), Query Frame = 1


Query: 10  KLPESFVPQRTVKGKSTPFSSLQGPRDANSSMNKPIGIHYETDSQTESAISKVLFEEFKR 69
           +L  + V  +TV+GK  PFSS  G  +   S++  IG+    + +   AI   +F++ K 
Sbjct: 55  RLHTTSVLPKTVQGKQKPFSSPLGCSNECGSIHGHIGVKKRGEDKANYAIDIQVFKQLKH 114

Query: 70  SEPNQSESSVLSGASEADIFSTDDMLESRKRKMLSEGFASTTPCESQARKKNVVVLGGDP 129
           S   + +     G  +   F T+ + ESRKRK  S G  S         +K++VVLGGDP
Sbjct: 115 SRKEKEDFMGSFGVDDIGSFHTNTVPESRKRKDPSVGGIS---------RKHLVVLGGDP 174

Query: 130 KPEKKRREAVHDIRNKKPKPLYNHYASGGGWWDCDMEGVDSEEVGLGEVWEGVGSTTLGG 189
           KP++  R   + IRNKKP+PL+NHYA+G GWWDC+MEGVD +EVG  + WEGVGSTTLGG
Sbjct: 175 KPKQTGR-LENFIRNKKPRPLFNHYANGSGWWDCNMEGVDGDEVGCNQAWEGVGSTTLGG 228

Query: 190 IEWH 194
           +EWH
Sbjct: 235 LEWH 228

[Close]

BLAST of Cp4.1LG08g02930.1 vs. NCBI nr
Match: gi|731390118|ref|XP_010650237.1| (PREDICTED: uncharacterized protein LOC100266687 isoform X4 [Vitis vinifera])

HSP 1 Score: 144.1 bits (362), Expect = 2.6e-31
Identity = 80/180 (44.44%), Postives = 110/180 (61.11%), Query Frame = 1


Query: 14  SFVPQRTVKGKSTPFSSLQGPRDANSSMNKPIGIHYETDSQTESAISKVLFEEFKRSEPN 73
           S +P+   +GK  PFSS  G  +   S++  IG+    + +   AI   +F++ K S   
Sbjct: 60  SVLPKTVQQGKQKPFSSPLGCSNECGSIHGHIGVKKRGEDKANYAIDIQVFKQLKHSRKE 119

Query: 74  QSESSVLSGASEADIFSTDDMLESRKRKMLSEGFASTTPCESQARKKNVVVLGGDPKPEK 133
           + +     G  +   F T+ + ESRKRK  S G  S         +K++VVLGGDPKP++
Sbjct: 120 KEDFMGSFGVDDIGSFHTNTVPESRKRKDPSVGGIS---------RKHLVVLGGDPKPKQ 179

Query: 134 KRREAVHDIRNKKPKPLYNHYASGGGWWDCDMEGVDSEEVGLGEVWEGVGSTTLGGIEWH 193
             R   + IRNKKP+PL+NHYA+G GWWDC+MEGVD +EVG  + WEGVGSTTLGG+EWH
Sbjct: 180 TGR-LENFIRNKKPRPLFNHYANGSGWWDCNMEGVDGDEVGCNQAWEGVGSTTLGGLEWH 229

[Close]

BLAST of Cp4.1LG08g02930.1 vs. NCBI nr
Match: gi|731390114|ref|XP_010650235.1| (PREDICTED: uncharacterized protein LOC100266687 isoform X2 [Vitis vinifera])

HSP 1 Score: 142.9 bits (359), Expect = 5.9e-31
Identity = 81/188 (43.09%), Postives = 114/188 (60.64%), Query Frame = 1


Query: 10  KLPESFVPQRTVKGKSTPFSSLQGPRDANSSMNKPIGIHYETDSQTESAISKVLFEEFKR 69
           +L  + V  +TV+GK  PFSS  G  +   S++  IG+    + +   AI   +F++ K 
Sbjct: 55  RLHTTSVLPKTVQGKQKPFSSPLGCSNECGSIHGHIGVKKRGEDKANYAIDIQVFKQLKH 114

Query: 70  SEPNQSESSVLSGASEADIFSTDDMLESRKRK----MLSEGFASTTPCESQARKKNVVVL 129
           S   + +     G  +   F T+ + ESRKRK    ++  G       E    +K++VVL
Sbjct: 115 SRKEKEDFMGSFGVDDIGSFHTNTVPESRKRKDPSGLILHGL------EGGISRKHLVVL 174

Query: 130 GGDPKPEKKRREAVHDIRNKKPKPLYNHYASGGGWWDCDMEGVDSEEVGLGEVWEGVGST 189
           GGDPKP++  R   + IRNKKP+PL+NHYA+G GWWDC+MEGVD +EVG  + WEGVGST
Sbjct: 175 GGDPKPKQTGR-LENFIRNKKPRPLFNHYANGSGWWDCNMEGVDGDEVGCNQAWEGVGST 234

Query: 190 TLGGIEWH 194
           TLGG+EWH
Sbjct: 235 TLGGLEWH 235

The following BLAST results are available for this feature:

BLAST of Cp4.1LG08g02930.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG08g02930.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7Z9_CUCSA	2.0e-70	76.09	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G132540 PE=4 SV=1	[more]
A0A061EKF3_THECC	6.5e-29	45.95	Uncharacterized protein OS=Theobroma cacao GN=TCM_020356 PE=4 SV=1	[more]
A0A067FD53_CITSI	1.1e-28	44.02	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g026914mg PE=4 SV=1	[more]
V4S1E5_9ROSI	4.2e-28	43.48	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005791mg PE=4 SV=1	[more]
A0A067JC55_JATCU	5.5e-28	40.58	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06404 PE=4 SV=1	[more]

BLAST of Cp4.1LG08g02930.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G13690.1	5.3e-22	52.68	unknown protein	[more]

BLAST of Cp4.1LG08g02930.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659075873\|ref\|XP_008438377.1\|	3.4e-71	76.63	PREDICTED: uncharacterized protein LOC103483493 [Cucumis melo]	[more]
gi\|449432440\|ref\|XP_004134007.1\|	2.9e-70	76.09	PREDICTED: uncharacterized protein LOC101216371 [Cucumis sativus]	[more]
gi\|225433444\|ref\|XP_002283374.1\|	1.2e-31	44.57	PREDICTED: uncharacterized protein LOC100266687 isoform X5 [Vitis vinifera]	[more]
gi\|731390118\|ref\|XP_010650237.1\|	2.6e-31	44.44	PREDICTED: uncharacterized protein LOC100266687 isoform X4 [Vitis vinifera]	[more]
gi\|731390114\|ref\|XP_010650235.1\|	5.9e-31	43.09	PREDICTED: uncharacterized protein LOC100266687 isoform X2 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG08g02930	Cp4.1LG08g02930	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG08g02930.1:cds:005	Cp4.1LG08g02930.1:cds:005	CDS
Cp4.1LG08g02930.1:cds:004	Cp4.1LG08g02930.1:cds:004	CDS
Cp4.1LG08g02930.1:cds:003	Cp4.1LG08g02930.1:cds:003	CDS
Cp4.1LG08g02930.1:cds:002	Cp4.1LG08g02930.1:cds:002	CDS
Cp4.1LG08g02930.1:cds:001	Cp4.1LG08g02930.1:cds:001	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG08g02930.1	Cp4.1LG08g02930.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR38382	FAMILY NOT NAMED	coord: 114..193 score: 1.4