Cp4.1LG07g07510.1 (mRNA) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG07g07510.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	60S ribosomal export protein NMD3
Location	Cp4.1LG07 : 6541521 .. 6543044 (-)
Sequence length	1524

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGGAGAAACAGGATTGTTTACAGTTCAACAGACTATTGGCAGTGTTTTATGTTGCAAATGTGGAATTCCCATGGCACCAAATGCTGCCAATATGTGCGTCAAGTGTTTGTGTTCCGAAGTTGACATCACAGAAGGTTTACAGAAGCAATTGACTATTATGCATTGTCCGGATTGCGAAAGTTACTTGCAGCCACCGCGAACTTGGATCAAAGCACAATTAGAATCAAAGAAACTATTGACATTCTGTATCAAAAGGTTAAAAAATCTGAATAAGGTTAAACTGCTACATGCTGAATTTGTTTGGACAGAACCCCATTCCAAGAGGATCAAGGTGAAGTTGAAAGTGCAGAAAGAAGTCCTTCATGGAGCACTTTTAGAACAGTCCTATGTTGTTGAGTATGTTGTACAGGATCACTTGTGCGAGTCTTGCTCAAGGGTCCAGGCCAATCCTGACCAGTGGGTGGCTTCTGTTCAACTCCGGCAGCACGTTCCTCACCGGCGTACCTTTTTCTTCTTGGAGCAACTGATATTAAGGCACAGTGCTGCTGCCAATGCCATAAGGATAAAACAAATGGATCAAGGTATTGACTTTTTCTTTTCTAATAGGAGTCATGGTGTCAAGTTTGTGGAATTTATTGGAAAGGTTGCTCCAACTAGGAGCCGCCAGGATAAACAACTTGTTTCTCATGATTCTAAGAGTAACGTTCACAACTATAAGCACACGTTCTCCGTTGAATTATCTCCAATATGTCGCGAGGATTTGATATGCTTGCCTCCTAAAGTTGCTGTTAGTTTGGGCAATATTGGCCCTCTTGTAATTTGCACTAAAGTTACAAACTCCGTGGCTTTGCTTGATCCATTAACCTTAAGGCACTGCTTCTTGGATGCGGAGCAGTATTGGAGGACATCCTTTAAGCCTCTACTCACTAGCAGGCAGCTTGTTGAATATATCGTCTTAGATATTGAGAATGTTTCTACTGAAGTCAATGTCAGTGGTTCGAAGTATATTTTGGCCGATGCTCAGATAGCTCGTGTATCAGACTTTGGAAGGAATGACACGATATTCAACATAAGAACCCATCTGGGTCATATTCTAAACCCTGGGGATTATGCCCTTGGTTATGATCTCTATAGAGCCAATAGTAATGATATGGAGCTAGAAAAATATAAGGGCCTTCAACTTCCAGAAGCTATTTTAATAAAGAAGAGTTATGAAGAAAAGCGCCAAAGAAAGCGTGGGAAGCCTCGATCGTGGAAGCTAAAATCTCTTGAAATGGATGTTGATGATAAAGATCAAGGTAGAGCAGAGCAAGATAAGATGCACTCGGAGTACGAACAGTTTTTGAGAGATTTGGAGGAGAATCCAGATTTGAGGTTCAACATATCGTTGTACCGAAATCGAGAATACCAACCGTCTGAAATGACTGATGGGGAAGATGGACCTTCGGTACCACTTGAAGAGTTGCTTGCTGATCTTGATTTAAGTGAAGGGGATGGGGACAATGGCATGCACGAGTAA

mRNA sequence

ATGGCTGGAGAAACAGGATTGTTTACAGTTCAACAGACTATTGGCAGTGTTTTATGTTGCAAATGTGGAATTCCCATGGCACCAAATGCTGCCAATATGTGCGTCAAGTGTTTGTGTTCCGAAGTTGACATCACAGAAGGTTTACAGAAGCAATTGACTATTATGCATTGTCCGGATTGCGAAAGTTACTTGCAGCCACCGCGAACTTGGATCAAAGCACAATTAGAATCAAAGAAACTATTGACATTCTGTATCAAAAGGTTAAAAAATCTGAATAAGGTTAAACTGCTACATGCTGAATTTGTTTGGACAGAACCCCATTCCAAGAGGATCAAGGTGAAGTTGAAAGTGCAGAAAGAAGTCCTTCATGGAGCACTTTTAGAACAGTCCTATGTTGTTGAGTATGTTGTACAGGATCACTTGTGCGAGTCTTGCTCAAGGGTCCAGGCCAATCCTGACCAGTGGGTGGCTTCTGTTCAACTCCGGCAGCACGTTCCTCACCGGCGTACCTTTTTCTTCTTGGAGCAACTGATATTAAGGCACAGTGCTGCTGCCAATGCCATAAGGATAAAACAAATGGATCAAGGTATTGACTTTTTCTTTTCTAATAGGAGTCATGGTGTCAAGTTTGTGGAATTTATTGGAAAGGTTGCTCCAACTAGGAGCCGCCAGGATAAACAACTTGTTTCTCATGATTCTAAGAGTAACGTTCACAACTATAAGCACACGTTCTCCGTTGAATTATCTCCAATATGTCGCGAGGATTTGATATGCTTGCCTCCTAAAGTTGCTGTTAGTTTGGGCAATATTGGCCCTCTTGTAATTTGCACTAAAGTTACAAACTCCGTGGCTTTGCTTGATCCATTAACCTTAAGGCACTGCTTCTTGGATGCGGAGCAGTATTGGAGGACATCCTTTAAGCCTCTACTCACTAGCAGGCAGCTTGTTGAATATATCGTCTTAGATATTGAGAATGTTTCTACTGAAGTCAATGTCAGTGGTTCGAAGTATATTTTGGCCGATGCTCAGATAGCTCGTGTATCAGACTTTGGAAGGAATGACACGATATTCAACATAAGAACCCATCTGGGTCATATTCTAAACCCTGGGGATTATGCCCTTGGTTATGATCTCTATAGAGCCAATAGTAATGATATGGAGCTAGAAAAATATAAGGGCCTTCAACTTCCAGAAGCTATTTTAATAAAGAAGAGTTATGAAGAAAAGCGCCAAAGAAAGCGTGGGAAGCCTCGATCGTGGAAGCTAAAATCTCTTGAAATGGATGTTGATGATAAAGATCAAGGTAGAGCAGAGCAAGATAAGATGCACTCGGAGTACGAACAGTTTTTGAGAGATTTGGAGGAGAATCCAGATTTGAGGTTCAACATATCGTTGTACCGAAATCGAGAATACCAACCGTCTGAAATGACTGATGGGGAAGATGGACCTTCGGTACCACTTGAAGAGTTGCTTGCTGATCTTGATTTAAGTGAAGGGGATGGGGACAATGGCATGCACGAGTAA

Coding sequence (CDS)

ATGGCTGGAGAAACAGGATTGTTTACAGTTCAACAGACTATTGGCAGTGTTTTATGTTGCAAATGTGGAATTCCCATGGCACCAAATGCTGCCAATATGTGCGTCAAGTGTTTGTGTTCCGAAGTTGACATCACAGAAGGTTTACAGAAGCAATTGACTATTATGCATTGTCCGGATTGCGAAAGTTACTTGCAGCCACCGCGAACTTGGATCAAAGCACAATTAGAATCAAAGAAACTATTGACATTCTGTATCAAAAGGTTAAAAAATCTGAATAAGGTTAAACTGCTACATGCTGAATTTGTTTGGACAGAACCCCATTCCAAGAGGATCAAGGTGAAGTTGAAAGTGCAGAAAGAAGTCCTTCATGGAGCACTTTTAGAACAGTCCTATGTTGTTGAGTATGTTGTACAGGATCACTTGTGCGAGTCTTGCTCAAGGGTCCAGGCCAATCCTGACCAGTGGGTGGCTTCTGTTCAACTCCGGCAGCACGTTCCTCACCGGCGTACCTTTTTCTTCTTGGAGCAACTGATATTAAGGCACAGTGCTGCTGCCAATGCCATAAGGATAAAACAAATGGATCAAGGTATTGACTTTTTCTTTTCTAATAGGAGTCATGGTGTCAAGTTTGTGGAATTTATTGGAAAGGTTGCTCCAACTAGGAGCCGCCAGGATAAACAACTTGTTTCTCATGATTCTAAGAGTAACGTTCACAACTATAAGCACACGTTCTCCGTTGAATTATCTCCAATATGTCGCGAGGATTTGATATGCTTGCCTCCTAAAGTTGCTGTTAGTTTGGGCAATATTGGCCCTCTTGTAATTTGCACTAAAGTTACAAACTCCGTGGCTTTGCTTGATCCATTAACCTTAAGGCACTGCTTCTTGGATGCGGAGCAGTATTGGAGGACATCCTTTAAGCCTCTACTCACTAGCAGGCAGCTTGTTGAATATATCGTCTTAGATATTGAGAATGTTTCTACTGAAGTCAATGTCAGTGGTTCGAAGTATATTTTGGCCGATGCTCAGATAGCTCGTGTATCAGACTTTGGAAGGAATGACACGATATTCAACATAAGAACCCATCTGGGTCATATTCTAAACCCTGGGGATTATGCCCTTGGTTATGATCTCTATAGAGCCAATAGTAATGATATGGAGCTAGAAAAATATAAGGGCCTTCAACTTCCAGAAGCTATTTTAATAAAGAAGAGTTATGAAGAAAAGCGCCAAAGAAAGCGTGGGAAGCCTCGATCGTGGAAGCTAAAATCTCTTGAAATGGATGTTGATGATAAAGATCAAGGTAGAGCAGAGCAAGATAAGATGCACTCGGAGTACGAACAGTTTTTGAGAGATTTGGAGGAGAATCCAGATTTGAGGTTCAACATATCGTTGTACCGAAATCGAGAATACCAACCGTCTGAAATGACTGATGGGGAAGATGGACCTTCGGTACCACTTGAAGAGTTGCTTGCTGATCTTGATTTAAGTGAAGGGGATGGGGACAATGGCATGCACGAGTAA

Protein sequence

MAGETGLFTVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESYLQPPRTWIKAQLESKKLLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKEVLHGALLEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILRHSAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPTRSRQDKQLVSHDSKSNVHNYKHTFSVELSPICREDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQYWRTSFKPLLTSRQLVEYIVLDIENVSTEVNVSGSKYILADAQIARVSDFGRNDTIFNIRTHLGHILNPGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSWKLKSLEMDVDDKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGEDGPSVPLEELLADLDLSEGDGDNGMHE

Homology

[Close]

BLAST of Cp4.1LG07g07510.1 vs. Swiss-Prot
Match: NMD3_XENTR (60S ribosomal export protein NMD3 OS=Xenopus tropicalis GN=nmd3 PE=2 SV=1)

HSP 1 Score: 455.3 bits (1170), Expect = 8.8e-127
Identity = 222/489 (45.40%), Postives = 330/489 (67.48%), Query Frame = 1


Query: 15  GSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESYLQPPRTWIKAQ 74
           G++LCC+CGIP+ PN ANMCV CL  +VDI+EG+ KQ+++  C  CE YLQPP TWI+  
Sbjct: 13  GNILCCQCGIPIPPNPANMCVSCLRMQVDISEGIPKQVSVHFCKQCERYLQPPGTWIQCA 72

Query: 75  LESKKLLTFCIKRLK-NLNKVKLLHAEFVWTEPHSKRIKVKLKVQKEVLHGALLEQSYVV 134
           LES++LLT C+K+LK NL+KV+L+ A F+WTEPHSKR+KVKL +QKEV++GA+L+Q +VV
Sbjct: 73  LESRELLTLCLKKLKANLSKVRLIDAGFIWTEPHSKRLKVKLTIQKEVMNGAILQQVFVV 132

Query: 135 EYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILRHSAAANAIRIKQM 194
           +Y+VQ  +C+ C RV+A  D W A VQ+RQ V H++TF++LEQ IL+H    N +R+K++
Sbjct: 133 DYIVQSQMCDDCHRVEAK-DFWKAVVQVRQKVLHKKTFYYLEQTILKHRLHQNTLRVKEI 192

Query: 195 DQGIDFFFSNRSHGVKFVEFIGKVAPTRSRQDKQLVSHDSKSNVHNYKHTFSVELSPICR 254
             G+DF+++++ H  K VEF+    P R +  ++L+SHD  +N +NYK TFSVE+ P+C+
Sbjct: 193 HDGLDFYYASKQHAQKMVEFLQCTVPCRFKASQRLISHDIHTNAYNYKSTFSVEIVPVCK 252

Query: 255 EDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQYWRTSFKPLLTSR 314
           ++L+CL PK+A SLGN+  + IC +VT+++ L+DP TL+   +D   YWR+ F  L   +
Sbjct: 253 DNLVCLSPKLAQSLGNMNQICICVRVTSTIHLIDPSTLQIAEVDGNTYWRSPFNSLFHPK 312

Query: 315 QLVEYIVLDIENVSTEVNVSG-----SKYILADAQIARVSDFGRNDTIFNIRTHLGHILN 374
           QL E+IV+D + V      +G     +K+ILA+  + + S+       ++ RTHLGH+LN
Sbjct: 313 QLEEFIVMDTDIVRDRKQAAGAGMRSNKHILAEVWVQKTSEMNTTQQ-YHCRTHLGHLLN 372

Query: 375 PGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSWKLKSLEMD 434
           PGD  LG+DL   N ND  + K     +P+ +LIKKSY+  ++++R   R+WKLK +E D
Sbjct: 373 PGDLVLGFDLANCNLNDEFINKMNPHHIPDVVLIKKSYDRTKRQRR---RNWKLKEIERD 432

Query: 435 VDDKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGEDGPSVPLE 494
            +  D     Q      Y+ FL DLEE+  +R N+++Y+N        TD E  P + L 
Sbjct: 433 REGMDTDDERQ------YQDFLEDLEEDEVIRKNVNIYKNANLPVESDTDEEGAPRISLA 490

Query: 495 ELLADLDLS 498
           E+L DL +S
Sbjct: 493 EMLEDLHIS 490

[Close]

BLAST of Cp4.1LG07g07510.1 vs. Swiss-Prot
Match: NMD3_XENLA (60S ribosomal export protein NMD3 OS=Xenopus laevis GN=nmd3 PE=2 SV=1)

HSP 1 Score: 454.5 bits (1168), Expect = 1.5e-126
Identity = 224/497 (45.07%), Postives = 335/497 (67.40%), Query Frame = 1


Query: 15  GSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESYLQPPRTWIKAQ 74
           G++LCC+CGIP+ PN ANMCV CL ++VDI+EG+ KQ+++  C  CE YLQPP TWI+  
Sbjct: 13  GNILCCQCGIPIPPNPANMCVACLRTQVDISEGIPKQVSVHFCKQCERYLQPPGTWIQCA 72

Query: 75  LESKKLLTFCIKRLK-NLNKVKLLHAEFVWTEPHSKRIKVKLKVQKEVLHGALLEQSYVV 134
           LES++LLT C+K+LK NL+KV+L+ A F+WTEPHSKR+KVKL +QKEV++GA+L+Q +VV
Sbjct: 73  LESRELLTLCLKKLKANLSKVRLIDAGFIWTEPHSKRLKVKLTIQKEVMNGAILQQVFVV 132

Query: 135 EYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILRHSAAANAIRIKQM 194
           +YVVQ  +C+ C RV+A  D W A VQ+RQ V H++TF++LEQ IL+H    N +R+K++
Sbjct: 133 DYVVQAQMCDDCHRVEAK-DFWKAVVQVRQKVLHKKTFYYLEQTILKHRLHQNTLRVKEI 192

Query: 195 DQGIDFFFSNRSHGVKFVEFIGKVAPTRSRQDKQLVSHDSKSNVHNYKHTFSVELSPICR 254
             G+DF+++++ HG K VEF+    P R +  ++L+SHD  +N +NYK TFSVE+ P+C+
Sbjct: 193 HDGLDFYYASKQHGQKMVEFLQCTVPCRFKASQRLISHDIHTNAYNYKSTFSVEIVPVCK 252

Query: 255 EDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQYWRTSFKPLLTSR 314
           ++L+CL PK+A SLGN+  + IC +VT+++ L+DP TL+   +D   YWR  F  L   +
Sbjct: 253 DNLVCLSPKLAQSLGNMNQICICARVTSTIHLIDPSTLQIAEVDGNTYWRYPFNSLFHPK 312

Query: 315 QLVEYIVLDIENVSTEVNVSG-----SKYILADAQIARVSDFGRNDTIFNIRTHLGHILN 374
           Q+ E+IV+D E +      +G     +K++LA+  + + S+       ++ RTHLGH+LN
Sbjct: 313 QMEEFIVMDTEIIRDRKQAAGAGMRSNKHVLAEVWVQKTSEMNTTQQ-YHCRTHLGHLLN 372

Query: 375 PGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSWKLKSLEMD 434
           PGD  LG+DL   N ND  + K     +P+ +LIKKSY+  R+++R   R+WKLK ++ D
Sbjct: 373 PGDLVLGFDLSNCNLNDEFINKMNPHHIPDVVLIKKSYDRARRQRR---RNWKLKEMDRD 432

Query: 435 VDDKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGEDGPSVPLE 494
            +  D     Q      Y+ FL DLEE+  LR N+++++N        TD E  P + L 
Sbjct: 433 REGMDTDDERQ------YQDFLEDLEEDELLRKNVNIFKNANVPVESDTDEEGAPRISLA 492

Query: 495 ELLADLDLS-EGDGDNG 505
           E+L DL +S +  G+ G
Sbjct: 493 EMLEDLHISQDATGEEG 498

[Close]

BLAST of Cp4.1LG07g07510.1 vs. Swiss-Prot
Match: NMD3_DANRE (60S ribosomal export protein NMD3 OS=Danio rerio GN=nmd3 PE=2 SV=1)

HSP 1 Score: 444.5 bits (1142), Expect = 1.5e-123
Identity = 221/498 (44.38%), Postives = 333/498 (66.87%), Query Frame = 1


Query: 15  GSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESYLQPPRTWIKAQ 74
           G++LCC CG+P+ PN ANMCV CL ++VDI+EG+ KQ+TI  C  CE YLQPP +W++  
Sbjct: 13  GNILCCTCGVPIPPNPANMCVSCLRTQVDISEGIPKQVTIHFCRQCERYLQPPGSWVQCA 72

Query: 75  LESKKLLTFCIKRLK-NLNKVKLLHAEFVWTEPHSKRIKVKLKVQKEVLHGALLEQSYVV 134
           LES++LL  C+K+LK +++KV+L+ A F+WTEPHSKRIK+KL +QKEV++GA+L+Q + V
Sbjct: 73  LESRELLALCLKKLKASMSKVRLIDAGFLWTEPHSKRIKIKLTIQKEVMNGAILQQVFTV 132

Query: 135 EYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILRHSAAANAIRIKQM 194
           E+VVQ  +CE C RV+A  D W A VQ+RQ   H++TF++LEQLIL+H    N +RIK++
Sbjct: 133 EFVVQGQMCEDCHRVEAK-DFWKAVVQVRQKTVHKKTFYYLEQLILKHKLHQNTVRIKEI 192

Query: 195 DQGIDFFFSNRSHGVKFVEFIGKVAPTRSRQDKQLVSHDSKSNVHNYKHTFSVELSPICR 254
            +GIDF+++ + H  K V+F+    P RS+  ++L+SHD  SN +NYK TFSVE+ P+C+
Sbjct: 193 HEGIDFYYATKQHAQKMVDFLQCTVPCRSKASQRLISHDVHSNTYNYKSTFSVEIVPVCK 252

Query: 255 EDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQYWRTSFKPLLTSR 314
           ++++CL P++A SLGN+G + +C +VT+S+ L+DP TL+   +D   +WR  F  L + R
Sbjct: 253 DNVVCLSPRLAQSLGNMGQVCVCVRVTSSIHLIDPNTLQIAEVDGSTFWRHPFNSLCSPR 312

Query: 315 QLVEYIVLDIENVSTE-----VNVSGSKYILADAQIARVSDFGRNDTIFNIRTHLGHILN 374
           QL E+I++DI+ +  +       +  +K+ LA+  + + S+   +   ++ RT +GH+LN
Sbjct: 313 QLEEFIIMDIDIIRDQRLGAGAGLKSNKHTLAEVWVQKTSEMDSSHQ-YHCRTFMGHLLN 372

Query: 375 PGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSWKLKSLEMD 434
            GD  LG+D   AN ND  L K     +P+ +LIKKSY+   + KR + R WKLK ++ +
Sbjct: 373 IGDLVLGFDFANANINDEFLNKMNPQHVPDVVLIKKSYD---RMKRARKRVWKLKEMDRE 432

Query: 435 VDDKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGED--GPSVP 494
            D  D     Q      Y +FL DLEE+  LR NI+++R+    P E +D +D   P + 
Sbjct: 433 KDAADTDDERQ------YTEFLEDLEEDEMLRKNINIFRDASKIPVEESDTDDDGAPRIS 492

Query: 495 LEELLADLDLSEGDGDNG 505
           L E+L DL LS+  G  G
Sbjct: 493 LAEMLEDLSLSDATGGEG 499

[Close]

BLAST of Cp4.1LG07g07510.1 vs. Swiss-Prot
Match: NMD3_DICDI (60S ribosomal export protein NMD3 OS=Dictyostelium discoideum GN=nmd3 PE=3 SV=1)

HSP 1 Score: 438.3 bits (1126), Expect = 1.1e-121
Identity = 218/459 (47.49%), Postives = 320/459 (69.72%), Query Frame = 1


Query: 16  SVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESYLQPPRTWIKAQL 75
           ++LCC CG+ +  N +NMCV C+ S+VDITEG+ KQLTI  C  C  YLQPP  W  A+L
Sbjct: 11  NILCCMCGVLIPANPSNMCVDCIKSQVDITEGIPKQLTIQWCRGCARYLQPPNHWAIAEL 70

Query: 76  ESKKLLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKEVLHGALLEQSYVVEY 135
           ES++LLT CIKR+K LNKVKL+ A +VWTEPHSKR+KVKL +QKEV   A+L+Q +++E+
Sbjct: 71  ESRELLTICIKRIKGLNKVKLVDAGWVWTEPHSKRLKVKLTIQKEVFTSAILQQIFIIEF 130

Query: 136 VVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILRHSAAANAIRIKQMDQ 195
           +VQ   C+ C + +A  D W + VQLRQ V H+RTF ++EQLIL+H+A +  + IK+   
Sbjct: 131 IVQGQQCDKCQKFEAK-DTWNSVVQLRQKVDHKRTFLYIEQLILKHNAHSQTLNIKEKPD 190

Query: 196 GIDFFFSNRSHGVKFVEFIGKVAPTRSRQDKQLVSHDSKSNVHNYKHTFSVELSPICRED 255
           G+DFFFSNR+H +KFVEFI  + P ++++ +QL+S D ++N  NYK+TFSVE+ P+ ++D
Sbjct: 191 GLDFFFSNRNHAMKFVEFISAITPVKTKKSEQLISSDEQNNAANYKYTFSVEIVPLSKDD 250

Query: 256 LICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQYWRTSFKPLLTSRQL 315
           ++CLPPK+A  LGN+GPLV+ TKV+N +  +DP TL    + A  +W + F+ L + +QL
Sbjct: 251 IVCLPPKIAHQLGNMGPLVVVTKVSNLIHFIDPNTLHTGEISALTFWNSPFRALSSYKQL 310

Query: 316 VEYIVLDIENVSTEVNVSGS---KYILADAQIARVSDFGRNDTIFNIRTHLGHILNPGDY 375
           VE+ VLD       VN++G+   +Y L+D Q+ R +DFG ND I++IR+HLG+ILNPGD 
Sbjct: 311 VEFTVLD-------VNLTGATRGRYALSDIQLMRSADFGANDNIYDIRSHLGNILNPGDL 370

Query: 376 ALGYDLYRANSNDMELE-KYKGLQLPEAILIKKSYEEKRQRKRGKPRSWKLKSLEMDVDD 435
           ALGYD+  +N  D +L    K  QLP+ +L+KK+Y  K   +    R W  K +  +  +
Sbjct: 371 ALGYDVASSNFPDSDLAGMKKNQQLPDFVLVKKTYPSKNDFR--FKRHWYFKEIPKEGIE 430

Query: 436 KDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYRNRE 471
             + + E D+M  + E+FLR++E +P+LR  I++Y+  +
Sbjct: 431 NPK-KFEIDQMERDREEFLREIEADPELRSKINIYKEAD 458

[Close]

BLAST of Cp4.1LG07g07510.1 vs. Swiss-Prot
Match: NMD3_BOVIN (60S ribosomal export protein NMD3 OS=Bos taurus GN=NMD3 PE=2 SV=1)

HSP 1 Score: 436.0 bits (1120), Expect = 5.5e-121
Identity = 221/506 (43.68%), Postives = 330/506 (65.22%), Query Frame = 1


Query: 10  VQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESYLQPPRT 69
           V+ T G +LCC CG+P++PN AN+CV CL S+VDI++G+ KQ++I  C  C+ Y QPP T
Sbjct: 8   VKHTPGHILCCDCGVPISPNPANICVACLRSKVDISQGIPKQVSISFCKQCQRYFQPPGT 67

Query: 70  WIKAQLESKKLLTFCIKRLKN-LNKVKLLHAEFVWTEPHSKRIKVKLKVQKEVLHGALLE 129
           W++  LES+ LL  C+K++K  L+KV+L+ A FVWTEPHSKR+KVKL +QKEV++GA+L+
Sbjct: 68  WVQCALESRDLLALCLKKIKAPLSKVRLVDASFVWTEPHSKRLKVKLTIQKEVMNGAILQ 127

Query: 130 QSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILRHSAAANAI 189
           Q +VV+YVVQ  +C  C RV+A  D W A VQ+RQ   H++TF++LEQLIL++    N +
Sbjct: 128 QVFVVDYVVQPQMCGDCHRVEAK-DFWKAVVQVRQKTLHKKTFYYLEQLILKYGMHQNTL 187

Query: 190 RIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPTRSRQDKQLVSHDSKSNVHNYKHTFSVEL 249
           RIK++  G+DF++S++ H  K VEF+    PTR +  ++L+S D  SN +NYK TFSVE+
Sbjct: 188 RIKEIHDGLDFYYSSKQHAQKMVEFLQCTVPTRYKASQRLISQDIHSNTYNYKSTFSVEI 247

Query: 250 SPICREDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQYWRTSFKP 309
            PIC+++++CL PK+A SLGN+  + +C +VT+ + L+DP TL+   +D   +W   F  
Sbjct: 248 VPICKDNVVCLSPKLAQSLGNMNQICVCIRVTSVIHLIDPNTLQVADIDGNTFWSHPFNS 307

Query: 310 LLTSRQLVEYIVLDIENV-----STEVNVSGSKYILADAQIARVSDFGRNDTIFNIRTHL 369
           L   +QL E+IV++   V     S    +   K+ L +  + + S+   +   F  RTHL
Sbjct: 308 LCHPKQLEEFIVMECSIVQDIKRSAGAGMISKKHTLGEVWVQKTSEMNTDKQYF-CRTHL 367

Query: 370 GHILNPGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSWKLK 429
           GH+LNPGD  LG+DL   N ND  + K K  ++P+ +LIKKSY+  R+++R   R+WKLK
Sbjct: 368 GHLLNPGDLVLGFDLVNCNLNDEHVNKMKSDRVPDVVLIKKSYDRTRRQRR---RNWKLK 427

Query: 430 SLEMDVDDKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGEDGP 489
            L  D ++ D     Q      Y+ FL DLEE+  +R N+++YR+        TD E  P
Sbjct: 428 ELARDRENTDTDDERQ------YQDFLEDLEEDEAIRKNVNIYRDSTIPVESDTDDEGAP 487

Query: 490 SVPLEELLADLDLSE----GDGDNGM 506
            + L E+L DL +S+    G+G++ M
Sbjct: 488 RISLAEMLEDLHISQDATGGEGESMM 502

[Close]

BLAST of Cp4.1LG07g07510.1 vs. TrEMBL
Match: A0A0A0KGY6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G502070 PE=4 SV=1)

HSP 1 Score: 929.9 bits (2402), Expect = 1.4e-267
Identity = 454/507 (89.55%), Postives = 489/507 (96.45%), Query Frame = 1


Query: 1   MAGETGLFTVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
           MA ETGLF+VQQTIG+VLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1   MAAETGLFSVQQTIGTVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60

Query: 61  ESYLQPPRTWIKAQLESKKLLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKE 120
           ESYLQPPRTWIKAQLESK+LLTFCIKRL+NLNKVKL+HAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120

Query: 121 VLHGALLEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILR 180
           VL GA+LEQSYV EYVVQDHLCESCSR+QANPDQWVASVQLRQHVPHRRTFFFLEQLIL+
Sbjct: 121 VLQGAILEQSYVAEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180

Query: 181 HSAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPTRSRQDKQLVSHDSKSNVHNY 240
           H AAA+AIRIKQMDQGIDFFFSNRSHGVKFVEF+GKVAP RSR DKQLVSHD KSN+HN+
Sbjct: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH 240

Query: 241 KHTFSVELSPICREDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQ 300
           KHTFSVE+SPICREDLICLPPKVAVSLGN+GPLVICTKVTN++ALLDP TLRHCFLDA+Q
Sbjct: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300

Query: 301 YWRTSFKPLLTSRQLVEYIVLDIENVSTEVNVSGSKYILADAQIARVSDFGRNDTIFNIR 360
           YWRTSF+ LLTSRQLVEY+VLDIENVSTEVNV+GSKY+LA AQ+ARVSDFGRNDT+F+I+
Sbjct: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIK 360

Query: 361 THLGHILNPGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSW 420
           THLGHILNPGDYALGYDLY ANSNDMELEKYKGL+LPEAILIKKSYEEKRQRK GKPRSW
Sbjct: 361 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKHGKPRSW 420

Query: 421 KLKSLEMDVDDKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGE 480
           KLKSL MDVDDK   + +++KM+SEYEQFLRDLEENPDLRFNISLYRNREYQPSE+TDGE
Sbjct: 421 KLKSLSMDVDDKT--KVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGE 480

Query: 481 DGPSVPLEELLADLDLSEGDGDNGMHE 508
           DGPSVPLEELLADLDLSEG+GD+ M+E
Sbjct: 481 DGPSVPLEELLADLDLSEGEGDDAMNE 505

[Close]

BLAST of Cp4.1LG07g07510.1 vs. TrEMBL
Match: F6HI03_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0043g00250 PE=4 SV=1)

HSP 1 Score: 861.7 bits (2225), Expect = 4.5e-247
Identity = 420/507 (82.84%), Postives = 474/507 (93.49%), Query Frame = 1


Query: 1   MAGETGLFTVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
           MA E G+F V QT+GSVLCCKCGIPM PNAANMCVKCL SE+DITEGLQK +TI+HCP+C
Sbjct: 61  MAEEAGMFMVHQTVGSVLCCKCGIPMTPNAANMCVKCLRSEIDITEGLQKHVTIVHCPEC 120

Query: 61  ESYLQPPRTWIKAQLESKKLLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKE 120
           ++YLQPP+TWIKAQLESK+LLTFC+KRLKNLNKV+L+HAEF+WTEPHSKRIKVKL+VQKE
Sbjct: 121 DTYLQPPKTWIKAQLESKELLTFCVKRLKNLNKVRLIHAEFIWTEPHSKRIKVKLRVQKE 180

Query: 121 VLHGALLEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILR 180
           VL+GA+LEQ+Y+VE+V Q+H+CESCSRVQANPDQWVASVQLRQHVPHRRTFF+LEQLILR
Sbjct: 181 VLNGAILEQAYIVEFVQQEHMCESCSRVQANPDQWVASVQLRQHVPHRRTFFYLEQLILR 240

Query: 181 HSAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPTRSRQDKQLVSHDSKSNVHNY 240
           H AA  AI+IKQMDQGIDFFF+NRSHGVKFVEFIGKV P+RSR DKQLVSHD+KSN +NY
Sbjct: 241 HDAAGRAIKIKQMDQGIDFFFANRSHGVKFVEFIGKVTPSRSRHDKQLVSHDTKSNNYNY 300

Query: 241 KHTFSVELSPICREDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQ 300
           K+TFSVE+ PICREDLICLPPKVAVSLGN+GPLVICTKV+N++ALLDP TLRHCFLDA+Q
Sbjct: 301 KYTFSVEICPICREDLICLPPKVAVSLGNLGPLVICTKVSNNIALLDPFTLRHCFLDADQ 360

Query: 301 YWRTSFKPLLTSRQLVEYIVLDIENVSTEVNVSGSKYILADAQIARVSDFGRNDTIFNIR 360
           YWR+SFK LL+SRQLVEYIVLD+E VS+EVNV GSKY LADAQ+ARVSDFG+NDTIFNIR
Sbjct: 361 YWRSSFKALLSSRQLVEYIVLDVEIVSSEVNVGGSKYALADAQVARVSDFGKNDTIFNIR 420

Query: 361 THLGHILNPGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSW 420
           THLGH+LNPGD+ALGYD+Y ANSNDMELEKY+G  LPEAILIKKSYEEKRQRKRGKPRSW
Sbjct: 421 THLGHLLNPGDHALGYDVYAANSNDMELEKYRGFVLPEAILIKKSYEEKRQRKRGKPRSW 480

Query: 421 KLKSLEMDVDDKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYRNREYQPSE---MT 480
           KLKSL M+VDD  +GRA+Q+KM++EYE FLRDLEE+P+LRFNISLYRN+EYQPSE   MT
Sbjct: 481 KLKSLNMEVDD-SKGRADQEKMNTEYEVFLRDLEEDPELRFNISLYRNKEYQPSEMASMT 540

Query: 481 DGEDGPSVPLEELLADLDLS-EGDGDN 504
           DGED PSVPLEELLADLDLS E DGDN
Sbjct: 541 DGEDLPSVPLEELLADLDLSEEEDGDN 566

[Close]

BLAST of Cp4.1LG07g07510.1 vs. TrEMBL
Match: V4S8T1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10011515mg PE=4 SV=1)

HSP 1 Score: 858.2 bits (2216), Expect = 5.0e-246
Identity = 421/512 (82.23%), Postives = 471/512 (91.99%), Query Frame = 1


Query: 1   MAGETGLFTVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
           MA + G+FTV QT+GSVLCCKCGIPMAPNAANMCV CL SEVDITEGLQK + I HCP+C
Sbjct: 1   MAQDAGMFTVPQTVGSVLCCKCGIPMAPNAANMCVACLRSEVDITEGLQKHVIISHCPEC 60

Query: 61  ESYLQPPRTWIKAQLESKKLLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKE 120
           + YLQPPRTWIKAQLESK+LLTFC+KRLKNLN+V+L++AEF+WTEPHSKRIKVKLKVQKE
Sbjct: 61  DCYLQPPRTWIKAQLESKELLTFCVKRLKNLNRVRLVNAEFIWTEPHSKRIKVKLKVQKE 120

Query: 121 VLHGALLEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILR 180
           VL+GA+LEQSYVVEYV QDH+C+SCSRVQANPDQWVA+VQLRQHV HRRTFF+LEQLIL+
Sbjct: 121 VLNGAILEQSYVVEYVQQDHMCDSCSRVQANPDQWVAAVQLRQHVTHRRTFFYLEQLILK 180

Query: 181 HSAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPTRSRQDKQLVSHDSKSNVHNY 240
           H AAA AIRIKQMDQGIDFFF NRSH VKFVEF+GKVAP RSR DKQLVSHD KSN  NY
Sbjct: 181 HDAAARAIRIKQMDQGIDFFFGNRSHAVKFVEFVGKVAPVRSRHDKQLVSHDPKSNNFNY 240

Query: 241 KHTFSVELSPICREDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQ 300
           K+TFSVE+SPICREDLICLPPKVAVSLGN+GPLVICTKVTNS+ALLDPLTLRHCFLDA+Q
Sbjct: 241 KYTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNSIALLDPLTLRHCFLDADQ 300

Query: 301 YWRTSFKPLLTSRQLVEYIVLDIENVSTEVNVSGSKYILADAQIARVSDFGRNDTIFNIR 360
           YWR+SFK LLTSRQLVEYIVLD+E VS+EVNV GSKY+LADAQ+ARVSDFG+NDTIF+IR
Sbjct: 301 YWRSSFKSLLTSRQLVEYIVLDVEVVSSEVNVGGSKYVLADAQVARVSDFGKNDTIFSIR 360

Query: 361 THLGHILNPGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSW 420
           THLGH+LNPGDYALGYDLY AN+NDMEL+KYKGL LPE ILIKKSYEEKR RKR KPRSW
Sbjct: 361 THLGHLLNPGDYALGYDLYSANNNDMELDKYKGLVLPETILIKKSYEEKRLRKRSKPRSW 420

Query: 421 KLKSLEMDVDDKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYRNREYQPSEM---T 480
           KLKSL+M+VDD  +GR +Q+KM+ EYE+FLRDLEENP+LRFNISLYRN++YQPSEM   T
Sbjct: 421 KLKSLDMEVDD-SKGRTDQEKMNKEYEEFLRDLEENPELRFNISLYRNKDYQPSEMASVT 480

Query: 481 DGEDGPSVPLEELLADLDL--SEGDGDNGMHE 508
           DGED PSVPL+ELLADLDL   +G+GD+ M E
Sbjct: 481 DGEDVPSVPLDELLADLDLKSDDGEGDDSMRE 511

[Close]

BLAST of Cp4.1LG07g07510.1 vs. TrEMBL
Match: A5AXA8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003522 PE=4 SV=1)

HSP 1 Score: 854.4 bits (2206), Expect = 7.2e-245
Identity = 413/503 (82.11%), Postives = 470/503 (93.44%), Query Frame = 1


Query: 1   MAGETGLFTVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
           MA E G+F V QT+GSVLCCKCGIPM PNAANMCVKCL SE+DITEGLQK +TI+HCP+C
Sbjct: 1   MAEEAGMFMVHQTVGSVLCCKCGIPMTPNAANMCVKCLRSEIDITEGLQKHVTIVHCPEC 60

Query: 61  ESYLQPPRTWIKAQLESKKLLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKE 120
           ++YLQPP+TWIKAQLESK+LLTFC+KRLKNLNKV+L+HAEF+WTEPHSKRIKVKL+VQKE
Sbjct: 61  DTYLQPPKTWIKAQLESKELLTFCVKRLKNLNKVRLIHAEFIWTEPHSKRIKVKLRVQKE 120

Query: 121 VLHGALLEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILR 180
           VL+GA+LEQ+Y+VE+V Q+H+CESCSRVQANPDQWVASVQLRQHVPHRRTFF+LEQLILR
Sbjct: 121 VLNGAILEQAYIVEFVQQEHMCESCSRVQANPDQWVASVQLRQHVPHRRTFFYLEQLILR 180

Query: 181 HSAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPTRSRQDKQLVSHDSKSNVHNY 240
           H AA  AI+IKQMDQGIDFFF+NRSHGVKFVEFIGKV P+RSR DKQLVSHD+KSN +NY
Sbjct: 181 HDAAGRAIKIKQMDQGIDFFFANRSHGVKFVEFIGKVTPSRSRHDKQLVSHDTKSNNYNY 240

Query: 241 KHTFSVELSPICREDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQ 300
           K+TFSVE+ PICREDLICLPPKVAVSLGN+GP+VICTKV+N++ALLDP TLRHCFLDA+Q
Sbjct: 241 KYTFSVEICPICREDLICLPPKVAVSLGNLGPVVICTKVSNNIALLDPFTLRHCFLDADQ 300

Query: 301 YWRTSFKPLLTSRQLVEYIVLDIENVSTEVNVSGSKYILADAQIARVSDFGRNDTIFNIR 360
           YWR+SFK LL+SRQLVEYIVLD+E VS+EVNV GSKY LADAQ+ARVSDFG+NDTIFNIR
Sbjct: 301 YWRSSFKALLSSRQLVEYIVLDVEIVSSEVNVGGSKYALADAQVARVSDFGKNDTIFNIR 360

Query: 361 THLGHILNPGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSW 420
           THLGH+LNPGD+ALGYD+Y ANSNDMELEKY+G  LPEAILIKKSYEEKRQRKRGKPRSW
Sbjct: 361 THLGHLLNPGDHALGYDVYAANSNDMELEKYRGFVLPEAILIKKSYEEKRQRKRGKPRSW 420

Query: 421 KLKSLEMDVDDKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYRNREYQPSE---MT 480
           KLKSL M+VDD  +GRA+Q+KM++EYE FLRDLEE+P+LRFNISLYRN+EYQPSE   MT
Sbjct: 421 KLKSLNMEVDD-SKGRADQEKMNTEYEVFLRDLEEDPELRFNISLYRNKEYQPSEMASMT 480

Query: 481 DGEDGPSVPLEELLADLDLSEGD 501
           DGED PSVPLEELLADLDL+  +
Sbjct: 481 DGEDLPSVPLEELLADLDLTSSN 502

[Close]

BLAST of Cp4.1LG07g07510.1 vs. TrEMBL
Match: A0A067FI91_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g010400mg PE=4 SV=1)

HSP 1 Score: 852.0 bits (2200), Expect = 3.6e-244
Identity = 418/512 (81.64%), Postives = 468/512 (91.41%), Query Frame = 1


Query: 1   MAGETGLFTVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
           MA + G+FTV QT+GSVLCCKCGIPMAPNAANMCV CL SEVDITEGLQK + I HCP+C
Sbjct: 1   MAQDAGMFTVPQTVGSVLCCKCGIPMAPNAANMCVACLRSEVDITEGLQKHVIISHCPEC 60

Query: 61  ESYLQPPRTWIKAQLESKKLLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKE 120
           + YLQPPRTWIKAQLESK+LLTFC+KRLKNLN+V+L++AEF+WTEPHSKRIKVKLKVQKE
Sbjct: 61  DCYLQPPRTWIKAQLESKELLTFCVKRLKNLNRVRLVNAEFIWTEPHSKRIKVKLKVQKE 120

Query: 121 VLHGALLEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILR 180
           VL+GA+LEQSYVVEYV QDH+C+SCSRVQANPDQWVA+VQLRQHV HRRTFF+LEQLIL+
Sbjct: 121 VLNGAILEQSYVVEYVQQDHMCDSCSRVQANPDQWVAAVQLRQHVTHRRTFFYLEQLILK 180

Query: 181 HSAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPTRSRQDKQLVSHDSKSNVHNY 240
           H AAA AIRI QMDQGIDFFF NRSH VKFVEF+GKVAP RSR DKQLVSHD KSN  NY
Sbjct: 181 HDAAARAIRITQMDQGIDFFFGNRSHAVKFVEFVGKVAPVRSRHDKQLVSHDPKSNNFNY 240

Query: 241 KHTFSVELSPICREDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQ 300
           K+TFSVE+SPICREDLICLPPKVAVSLGN+GPLVIC KVTNS+ALLDP TLRHCFLDA+Q
Sbjct: 241 KYTFSVEISPICREDLICLPPKVAVSLGNLGPLVICMKVTNSIALLDPFTLRHCFLDADQ 300

Query: 301 YWRTSFKPLLTSRQLVEYIVLDIENVSTEVNVSGSKYILADAQIARVSDFGRNDTIFNIR 360
           YWR+SFK LLTSRQLVEYIVLD+E VS+EVNV GSKY+LADAQ+ARVSDFG+NDTIF+IR
Sbjct: 301 YWRSSFKSLLTSRQLVEYIVLDVEVVSSEVNVGGSKYVLADAQVARVSDFGKNDTIFSIR 360

Query: 361 THLGHILNPGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSW 420
           THLGH+LNPGDYALGYDLY AN+NDMEL+KYKGL LPE ILIKKSYEEKR RKR KPRSW
Sbjct: 361 THLGHLLNPGDYALGYDLYSANNNDMELDKYKGLVLPETILIKKSYEEKRLRKRSKPRSW 420

Query: 421 KLKSLEMDVDDKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYRNREYQPSEM---T 480
           KLKSL+M+VDD  +GR +Q+KM+ EYE+FLRDLEENP+LRFNISLYRN++YQPSEM   T
Sbjct: 421 KLKSLDMEVDD-SKGRTDQEKMNKEYEEFLRDLEENPELRFNISLYRNKDYQPSEMASVT 480

Query: 481 DGEDGPSVPLEELLADLDL--SEGDGDNGMHE 508
           DGED PSVPL+ELLADLDL   +G+GD+ M E
Sbjct: 481 DGEDVPSVPLDELLADLDLKSDDGEGDDSMRE 511

[Close]

BLAST of Cp4.1LG07g07510.1 vs. TAIR10
Match: AT2G03820.1 (AT2G03820.1 nonsense-mediated mRNA decay NMD3 family protein)

HSP 1 Score: 698.7 bits (1802), Expect = 2.6e-201
Identity = 350/506 (69.17%), Postives = 415/506 (82.02%), Query Frame = 1


Query: 4   ETGLFTVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESY 63
           E+G+F VQQTIGSVLCCKCG+PMAPNAANMCV CL SEVDITEGLQK + I +CP+C  Y
Sbjct: 6   ESGMFNVQQTIGSVLCCKCGVPMAPNAANMCVNCLRSEVDITEGLQKSIQIFYCPECTCY 65

Query: 64  LQPPRTWIKAQLESKKLLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKEVLH 123
           LQPP+TWIK Q ESK+LLTFCIKRLKNLNKVKL +AEFVWTEPHSKRIKVKL VQ EVL+
Sbjct: 66  LQPPKTWIKCQWESKELLTFCIKRLKNLNKVKLKNAEFVWTEPHSKRIKVKLTVQAEVLN 125

Query: 124 GALLEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILRHSA 183
           GA+LEQSY VEY V+D+LCESCSR QANPDQWVAS+QLRQHV HRRTFF+LEQLILRH A
Sbjct: 126 GAVLEQSYPVEYTVRDNLCESCSRFQANPDQWVASIQLRQHVSHRRTFFYLEQLILRHDA 185

Query: 184 AANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPTRSRQDKQLVSHDSKSNVHNYKHT 243
           A+ AIRI+Q+DQGIDFFF N+SH   FVEF+ KV P   RQD+QLVSHD KS+++NYK+T
Sbjct: 186 ASRAIRIQQVDQGIDFFFGNKSHANSFVEFLRKVVPIEYRQDQQLVSHDVKSSLYNYKYT 245

Query: 244 FSVELSPICREDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQYWR 303
           +SV++ P+CREDL+CLP KVA  LGN+GPLV+CTKV++++ LLDP TLR  FLDA QYWR
Sbjct: 246 YSVKICPVCREDLVCLPSKVASGLGNLGPLVVCTKVSDNITLLDPRTLRCAFLDARQYWR 305

Query: 304 TSFKPLLTSRQLVEYIVLDIENVSTEVNVSGSKYILADAQIARVSDFGRNDTIFNIRTHL 363
           + F+  LTSRQLV+Y V D+E    E  V G KY L+  QIAR SD G+   +F ++THL
Sbjct: 306 SGFRSALTSRQLVKYFVFDVEPPVGEATVGGQKYALSYVQIARESDIGK---MFYVQTHL 365

Query: 364 GHILNPGDYALGYDLYRANSNDMELEKYK---GLQLPEAILIKKSYEEKRQRKRGKPRSW 423
           GHIL PGD ALGYD+Y AN ND E+EKY+      LPEAILIKK YEE+R+RK+ K R+W
Sbjct: 366 GHILKPGDQALGYDIYGANVNDNEMEKYRLSVKNGLPEAILIKKCYEEQRERKQKKSRNW 425

Query: 424 KLKSLEMDVDDKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYRNREYQPSE---MT 483
           KLKSL M++DD  +GR + +K   EYE+FLRDLEENP+LRFNISLYR+++YQ SE   MT
Sbjct: 426 KLKSLPMEMDD-SRGRVDPEKTDKEYEEFLRDLEENPELRFNISLYRDKDYQASETASMT 485

Query: 484 DGEDGPSVPLEELLADLDLSEGDGDN 504
           DGE  PSVP+EELLADLDLS  + D+
Sbjct: 486 DGEGAPSVPIEELLADLDLSFEEEDD 507

[Close]

BLAST of Cp4.1LG07g07510.1 vs. NCBI nr
Match: gi|659080259|ref|XP_008440695.1| (PREDICTED: 60S ribosomal export protein NMD3 [Cucumis melo])

HSP 1 Score: 933.7 bits (2412), Expect = 1.3e-268
Identity = 455/507 (89.74%), Postives = 490/507 (96.65%), Query Frame = 1


Query: 1   MAGETGLFTVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
           MA ETGLF VQQTIG+VLCCKCGIPM PNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1   MAAETGLFAVQQTIGTVLCCKCGIPMTPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60

Query: 61  ESYLQPPRTWIKAQLESKKLLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKE 120
           ESYLQPPRTWIKAQLESK+LLTFCIKRL+NLNKVKL+HAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120

Query: 121 VLHGALLEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILR 180
           VLHGA+LEQSYVVEYVVQDHLCESCSR+QANPDQWVASVQLRQHVPHRRTFFFLEQLIL+
Sbjct: 121 VLHGAILEQSYVVEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180

Query: 181 HSAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPTRSRQDKQLVSHDSKSNVHNY 240
           H AAA+AIRIKQMDQGIDFFFSNRSHGVKFVEF+GKVAP RSR DKQLVSHD KSN+HN+
Sbjct: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH 240

Query: 241 KHTFSVELSPICREDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQ 300
           KHTFSVE+SPICREDLICLPPKVAVSLGN+GPLVICTKVTN++ALLDP TLRHCFLDA+Q
Sbjct: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300

Query: 301 YWRTSFKPLLTSRQLVEYIVLDIENVSTEVNVSGSKYILADAQIARVSDFGRNDTIFNIR 360
           YWRTSF+ LLTSRQLVEY+VLDIENVSTEVNV+GSKY+LA AQ+ARVSDFGRNDT+F+I+
Sbjct: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIK 360

Query: 361 THLGHILNPGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSW 420
           THLGHILNPGDYALGYDLY ANSNDMELEKYKGL+LPEAILIKKSYEEKRQRKRGKPRSW
Sbjct: 361 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSW 420

Query: 421 KLKSLEMDVDDKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGE 480
           KLKSL MDVDDK   + +++KM+SEYEQFLRDLEENPDLRFNISLYRNREYQPSE+TDGE
Sbjct: 421 KLKSLAMDVDDK--SKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGE 480

Query: 481 DGPSVPLEELLADLDLSEGDGDNGMHE 508
           DGPSVPL+ELLADLDLSEG+GD+ M+E
Sbjct: 481 DGPSVPLDELLADLDLSEGEGDDAMNE 505

[Close]

BLAST of Cp4.1LG07g07510.1 vs. NCBI nr
Match: gi|449451509|ref|XP_004143504.1| (PREDICTED: 60S ribosomal export protein NMD3 [Cucumis sativus])

HSP 1 Score: 929.9 bits (2402), Expect = 1.9e-267
Identity = 454/507 (89.55%), Postives = 489/507 (96.45%), Query Frame = 1


Query: 1   MAGETGLFTVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
           MA ETGLF+VQQTIG+VLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1   MAAETGLFSVQQTIGTVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60

Query: 61  ESYLQPPRTWIKAQLESKKLLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKE 120
           ESYLQPPRTWIKAQLESK+LLTFCIKRL+NLNKVKL+HAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120

Query: 121 VLHGALLEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILR 180
           VL GA+LEQSYV EYVVQDHLCESCSR+QANPDQWVASVQLRQHVPHRRTFFFLEQLIL+
Sbjct: 121 VLQGAILEQSYVAEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180

Query: 181 HSAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPTRSRQDKQLVSHDSKSNVHNY 240
           H AAA+AIRIKQMDQGIDFFFSNRSHGVKFVEF+GKVAP RSR DKQLVSHD KSN+HN+
Sbjct: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH 240

Query: 241 KHTFSVELSPICREDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQ 300
           KHTFSVE+SPICREDLICLPPKVAVSLGN+GPLVICTKVTN++ALLDP TLRHCFLDA+Q
Sbjct: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300

Query: 301 YWRTSFKPLLTSRQLVEYIVLDIENVSTEVNVSGSKYILADAQIARVSDFGRNDTIFNIR 360
           YWRTSF+ LLTSRQLVEY+VLDIENVSTEVNV+GSKY+LA AQ+ARVSDFGRNDT+F+I+
Sbjct: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIK 360

Query: 361 THLGHILNPGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSW 420
           THLGHILNPGDYALGYDLY ANSNDMELEKYKGL+LPEAILIKKSYEEKRQRK GKPRSW
Sbjct: 361 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKHGKPRSW 420

Query: 421 KLKSLEMDVDDKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGE 480
           KLKSL MDVDDK   + +++KM+SEYEQFLRDLEENPDLRFNISLYRNREYQPSE+TDGE
Sbjct: 421 KLKSLSMDVDDKT--KVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGE 480

Query: 481 DGPSVPLEELLADLDLSEGDGDNGMHE 508
           DGPSVPLEELLADLDLSEG+GD+ M+E
Sbjct: 481 DGPSVPLEELLADLDLSEGEGDDAMNE 505

[Close]

BLAST of Cp4.1LG07g07510.1 vs. NCBI nr
Match: gi|225430590|ref|XP_002265288.1| (PREDICTED: 60S ribosomal export protein NMD3 [Vitis vinifera])

HSP 1 Score: 862.1 bits (2226), Expect = 5.0e-247
Identity = 421/511 (82.39%), Postives = 475/511 (92.95%), Query Frame = 1


Query: 1   MAGETGLFTVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
           MA E G+F V QT+GSVLCCKCGIPM PNAANMCVKCL SE+DITEGLQK +TI+HCP+C
Sbjct: 1   MAEEAGMFMVHQTVGSVLCCKCGIPMTPNAANMCVKCLRSEIDITEGLQKHVTIVHCPEC 60

Query: 61  ESYLQPPRTWIKAQLESKKLLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKE 120
           ++YLQPP+TWIKAQLESK+LLTFC+KRLKNLNKV+L+HAEF+WTEPHSKRIKVKL+VQKE
Sbjct: 61  DTYLQPPKTWIKAQLESKELLTFCVKRLKNLNKVRLIHAEFIWTEPHSKRIKVKLRVQKE 120

Query: 121 VLHGALLEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILR 180
           VL+GA+LEQ+Y+VE+V Q+H+CESCSRVQANPDQWVASVQLRQHVPHRRTFF+LEQLILR
Sbjct: 121 VLNGAILEQAYIVEFVQQEHMCESCSRVQANPDQWVASVQLRQHVPHRRTFFYLEQLILR 180

Query: 181 HSAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPTRSRQDKQLVSHDSKSNVHNY 240
           H AA  AI+IKQMDQGIDFFF+NRSHGVKFVEFIGKV P+RSR DKQLVSHD+KSN +NY
Sbjct: 181 HDAAGRAIKIKQMDQGIDFFFANRSHGVKFVEFIGKVTPSRSRHDKQLVSHDTKSNNYNY 240

Query: 241 KHTFSVELSPICREDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQ 300
           K+TFSVE+ PICREDLICLPPKVAVSLGN+GPLVICTKV+N++ALLDP TLRHCFLDA+Q
Sbjct: 241 KYTFSVEICPICREDLICLPPKVAVSLGNLGPLVICTKVSNNIALLDPFTLRHCFLDADQ 300

Query: 301 YWRTSFKPLLTSRQLVEYIVLDIENVSTEVNVSGSKYILADAQIARVSDFGRNDTIFNIR 360
           YWR+SFK LL+SRQLVEYIVLD+E VS+EVNV GSKY LADAQ+ARVSDFG+NDTIFNIR
Sbjct: 301 YWRSSFKALLSSRQLVEYIVLDVEIVSSEVNVGGSKYALADAQVARVSDFGKNDTIFNIR 360

Query: 361 THLGHILNPGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSW 420
           THLGH+LNPGD+ALGYD+Y ANSNDMELEKY+G  LPEAILIKKSYEEKRQRKRGKPRSW
Sbjct: 361 THLGHLLNPGDHALGYDVYAANSNDMELEKYRGFVLPEAILIKKSYEEKRQRKRGKPRSW 420

Query: 421 KLKSLEMDVDDKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYRNREYQPSE---MT 480
           KLKSL M+VDD  +GRA+Q+KM++EYE FLRDLEE+P+LRFNISLYRN+EYQPSE   MT
Sbjct: 421 KLKSLNMEVDD-SKGRADQEKMNTEYEVFLRDLEEDPELRFNISLYRNKEYQPSEMASMT 480

Query: 481 DGEDGPSVPLEELLADLDLS-EGDGDNGMHE 508
           DGED PSVPLEELLADLDLS E DGD  M E
Sbjct: 481 DGEDLPSVPLEELLADLDLSEEEDGDVSMRE 510

[Close]

BLAST of Cp4.1LG07g07510.1 vs. NCBI nr
Match: gi|567876167|ref|XP_006430673.1| (hypothetical protein CICLE_v10011515mg [Citrus clementina])

HSP 1 Score: 858.2 bits (2216), Expect = 7.2e-246
Identity = 421/512 (82.23%), Postives = 471/512 (91.99%), Query Frame = 1


Query: 1   MAGETGLFTVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
           MA + G+FTV QT+GSVLCCKCGIPMAPNAANMCV CL SEVDITEGLQK + I HCP+C
Sbjct: 1   MAQDAGMFTVPQTVGSVLCCKCGIPMAPNAANMCVACLRSEVDITEGLQKHVIISHCPEC 60

Query: 61  ESYLQPPRTWIKAQLESKKLLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKE 120
           + YLQPPRTWIKAQLESK+LLTFC+KRLKNLN+V+L++AEF+WTEPHSKRIKVKLKVQKE
Sbjct: 61  DCYLQPPRTWIKAQLESKELLTFCVKRLKNLNRVRLVNAEFIWTEPHSKRIKVKLKVQKE 120

Query: 121 VLHGALLEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILR 180
           VL+GA+LEQSYVVEYV QDH+C+SCSRVQANPDQWVA+VQLRQHV HRRTFF+LEQLIL+
Sbjct: 121 VLNGAILEQSYVVEYVQQDHMCDSCSRVQANPDQWVAAVQLRQHVTHRRTFFYLEQLILK 180

Query: 181 HSAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPTRSRQDKQLVSHDSKSNVHNY 240
           H AAA AIRIKQMDQGIDFFF NRSH VKFVEF+GKVAP RSR DKQLVSHD KSN  NY
Sbjct: 181 HDAAARAIRIKQMDQGIDFFFGNRSHAVKFVEFVGKVAPVRSRHDKQLVSHDPKSNNFNY 240

Query: 241 KHTFSVELSPICREDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQ 300
           K+TFSVE+SPICREDLICLPPKVAVSLGN+GPLVICTKVTNS+ALLDPLTLRHCFLDA+Q
Sbjct: 241 KYTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNSIALLDPLTLRHCFLDADQ 300

Query: 301 YWRTSFKPLLTSRQLVEYIVLDIENVSTEVNVSGSKYILADAQIARVSDFGRNDTIFNIR 360
           YWR+SFK LLTSRQLVEYIVLD+E VS+EVNV GSKY+LADAQ+ARVSDFG+NDTIF+IR
Sbjct: 301 YWRSSFKSLLTSRQLVEYIVLDVEVVSSEVNVGGSKYVLADAQVARVSDFGKNDTIFSIR 360

Query: 361 THLGHILNPGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSW 420
           THLGH+LNPGDYALGYDLY AN+NDMEL+KYKGL LPE ILIKKSYEEKR RKR KPRSW
Sbjct: 361 THLGHLLNPGDYALGYDLYSANNNDMELDKYKGLVLPETILIKKSYEEKRLRKRSKPRSW 420

Query: 421 KLKSLEMDVDDKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYRNREYQPSEM---T 480
           KLKSL+M+VDD  +GR +Q+KM+ EYE+FLRDLEENP+LRFNISLYRN++YQPSEM   T
Sbjct: 421 KLKSLDMEVDD-SKGRTDQEKMNKEYEEFLRDLEENPELRFNISLYRNKDYQPSEMASVT 480

Query: 481 DGEDGPSVPLEELLADLDL--SEGDGDNGMHE 508
           DGED PSVPL+ELLADLDL   +G+GD+ M E
Sbjct: 481 DGEDVPSVPLDELLADLDLKSDDGEGDDSMRE 511

[Close]

BLAST of Cp4.1LG07g07510.1 vs. NCBI nr
Match: gi|147798057|emb|CAN60703.1| (hypothetical protein VITISV_003522 [Vitis vinifera])

HSP 1 Score: 854.4 bits (2206), Expect = 1.0e-244
Identity = 413/503 (82.11%), Postives = 470/503 (93.44%), Query Frame = 1


Query: 1   MAGETGLFTVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
           MA E G+F V QT+GSVLCCKCGIPM PNAANMCVKCL SE+DITEGLQK +TI+HCP+C
Sbjct: 1   MAEEAGMFMVHQTVGSVLCCKCGIPMTPNAANMCVKCLRSEIDITEGLQKHVTIVHCPEC 60

Query: 61  ESYLQPPRTWIKAQLESKKLLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKE 120
           ++YLQPP+TWIKAQLESK+LLTFC+KRLKNLNKV+L+HAEF+WTEPHSKRIKVKL+VQKE
Sbjct: 61  DTYLQPPKTWIKAQLESKELLTFCVKRLKNLNKVRLIHAEFIWTEPHSKRIKVKLRVQKE 120

Query: 121 VLHGALLEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILR 180
           VL+GA+LEQ+Y+VE+V Q+H+CESCSRVQANPDQWVASVQLRQHVPHRRTFF+LEQLILR
Sbjct: 121 VLNGAILEQAYIVEFVQQEHMCESCSRVQANPDQWVASVQLRQHVPHRRTFFYLEQLILR 180

Query: 181 HSAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPTRSRQDKQLVSHDSKSNVHNY 240
           H AA  AI+IKQMDQGIDFFF+NRSHGVKFVEFIGKV P+RSR DKQLVSHD+KSN +NY
Sbjct: 181 HDAAGRAIKIKQMDQGIDFFFANRSHGVKFVEFIGKVTPSRSRHDKQLVSHDTKSNNYNY 240

Query: 241 KHTFSVELSPICREDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQ 300
           K+TFSVE+ PICREDLICLPPKVAVSLGN+GP+VICTKV+N++ALLDP TLRHCFLDA+Q
Sbjct: 241 KYTFSVEICPICREDLICLPPKVAVSLGNLGPVVICTKVSNNIALLDPFTLRHCFLDADQ 300

Query: 301 YWRTSFKPLLTSRQLVEYIVLDIENVSTEVNVSGSKYILADAQIARVSDFGRNDTIFNIR 360
           YWR+SFK LL+SRQLVEYIVLD+E VS+EVNV GSKY LADAQ+ARVSDFG+NDTIFNIR
Sbjct: 301 YWRSSFKALLSSRQLVEYIVLDVEIVSSEVNVGGSKYALADAQVARVSDFGKNDTIFNIR 360

Query: 361 THLGHILNPGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSW 420
           THLGH+LNPGD+ALGYD+Y ANSNDMELEKY+G  LPEAILIKKSYEEKRQRKRGKPRSW
Sbjct: 361 THLGHLLNPGDHALGYDVYAANSNDMELEKYRGFVLPEAILIKKSYEEKRQRKRGKPRSW 420

Query: 421 KLKSLEMDVDDKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYRNREYQPSE---MT 480
           KLKSL M+VDD  +GRA+Q+KM++EYE FLRDLEE+P+LRFNISLYRN+EYQPSE   MT
Sbjct: 421 KLKSLNMEVDD-SKGRADQEKMNTEYEVFLRDLEEDPELRFNISLYRNKEYQPSEMASMT 480

Query: 481 DGEDGPSVPLEELLADLDLSEGD 501
           DGED PSVPLEELLADLDL+  +
Sbjct: 481 DGEDLPSVPLEELLADLDLTSSN 502

The following BLAST results are available for this feature:

BLAST of Cp4.1LG07g07510.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NMD3_XENTR	8.8e-127	45.40	60S ribosomal export protein NMD3 OS=Xenopus tropicalis GN=nmd3 PE=2 SV=1	[more]
NMD3_XENLA	1.5e-126	45.07	60S ribosomal export protein NMD3 OS=Xenopus laevis GN=nmd3 PE=2 SV=1	[more]
NMD3_DANRE	1.5e-123	44.38	60S ribosomal export protein NMD3 OS=Danio rerio GN=nmd3 PE=2 SV=1	[more]
NMD3_DICDI	1.1e-121	47.49	60S ribosomal export protein NMD3 OS=Dictyostelium discoideum GN=nmd3 PE=3 SV=1	[more]
NMD3_BOVIN	5.5e-121	43.68	60S ribosomal export protein NMD3 OS=Bos taurus GN=NMD3 PE=2 SV=1	[more]

BLAST of Cp4.1LG07g07510.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGY6_CUCSA	1.4e-267	89.55	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G502070 PE=4 SV=1	[more]
F6HI03_VITVI	4.5e-247	82.84	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0043g00250 PE=4 SV=...	[more]
V4S8T1_9ROSI	5.0e-246	82.23	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10011515mg PE=4 SV=1	[more]
A5AXA8_VITVI	7.2e-245	82.11	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003522 PE=4 SV=1	[more]
A0A067FI91_CITSI	3.6e-244	81.64	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g010400mg PE=4 SV=1	[more]

BLAST of Cp4.1LG07g07510.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G03820.1	2.6e-201	69.17	nonsense-mediated mRNA decay NMD3 family protein	[more]

BLAST of Cp4.1LG07g07510.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659080259\|ref\|XP_008440695.1\|	1.3e-268	89.74	PREDICTED: 60S ribosomal export protein NMD3 [Cucumis melo]	[more]
gi\|449451509\|ref\|XP_004143504.1\|	1.9e-267	89.55	PREDICTED: 60S ribosomal export protein NMD3 [Cucumis sativus]	[more]
gi\|225430590\|ref\|XP_002265288.1\|	5.0e-247	82.39	PREDICTED: 60S ribosomal export protein NMD3 [Vitis vinifera]	[more]
gi\|567876167\|ref\|XP_006430673.1\|	7.2e-246	82.23	hypothetical protein CICLE_v10011515mg [Citrus clementina]	[more]
gi\|147798057\|emb\|CAN60703.1\|	1.0e-244	82.11	hypothetical protein VITISV_003522 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR007064	NMD3

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG07g07510	Cp4.1LG07g07510	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG07g07510.1:cds:001	Cp4.1LG07g07510.1:cds:001	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG07g07510.1	Cp4.1LG07g07510.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007064	NMD3	PFAM	PF04981	NMD3	coord: 19..248 score: 4.2
None	No IPR available	PANTHER	PTHR12746	NONSENSE-MEDIATED MRNA DECAY PROTEIN 3	coord: 1..507 score: