Cp4.1LG07g04850.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCGATTCGTTACACTACCCATCAGAGCTCTTGGCAAGGCCAAGGATTTGTATGTACGAAGCATCATGGATTGTGCTCCGAGAGTTAGCCATGGCTACCCATCTGGCCAAATGCCCGTCTTGCCCAAAAGTTACAGCTCGCGATCCTGCAGATCCAATGAAACCGATGATTTCAGAGAGCTTGTTAAGGCCGCTTCTGTTAGGAGTATGGACATTAAAGATGTCGACGCCGATGTTGTTTATCCACAGAGGGTGAGACAGTCCACAGGGCTGCCTAAGAGTTGCAGCGTTGGAATGGGTAGGATTGATGAAGATAGTGCTTGCGAGTTTGAAGGTGGCGTGGAGGAGAAGGGTGATTTGGTTTATCCAAGGAGTAGAAGCTACGCTGTGACGAGTACAAAATCTGGGGCTTGA ATGCGATTCGTTACACTACCCATCAGAGCTCTTGGCAAGGCCAAGGATTTGTATGTACGAAGCATCATGGATTGTGCTCCGAGAGTTAGCCATGGCTACCCATCTGGCCAAATGCCCGTCTTGCCCAAAAGTTACAGCTCGCGATCCTGCAGATCCAATGAAACCGATGATTTCAGAGAGCTTGTTAAGGCCGCTTCTGTTAGGAGTATGGACATTAAAGATGTCGACGCCGATGTTGTTTATCCACAGAGGGTGAGACAGTCCACAGGGCTGCCTAAGAGTTGCAGCGTTGGAATGGGTAGGATTGATGAAGATAGTGCTTGCGAGTTTGAAGGTGGCGTGGAGGAGAAGGGTGATTTGGTTTATCCAAGGAGTAGAAGCTACGCTGTGACGAGTACAAAATCTGGGGCTTGA ATGCGATTCGTTACACTACCCATCAGAGCTCTTGGCAAGGCCAAGGATTTGTATGTACGAAGCATCATGGATTGTGCTCCGAGAGTTAGCCATGGCTACCCATCTGGCCAAATGCCCGTCTTGCCCAAAAGTTACAGCTCGCGATCCTGCAGATCCAATGAAACCGATGATTTCAGAGAGCTTGTTAAGGCCGCTTCTGTTAGGAGTATGGACATTAAAGATGTCGACGCCGATGTTGTTTATCCACAGAGGGTGAGACAGTCCACAGGGCTGCCTAAGAGTTGCAGCGTTGGAATGGGTAGGATTGATGAAGATAGTGCTTGCGAGTTTGAAGGTGGCGTGGAGGAGAAGGGTGATTTGGTTTATCCAAGGAGTAGAAGCTACGCTGTGACGAGTACAAAATCTGGGGCTTGA MRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRELVKAASVRSMDIKDVDADVVYPQRVRQSTGLPKSCSVGMGRIDEDSACEFEGGVEEKGDLVYPRSRSYAVTSTKSGA
BLAST of Cp4.1LG07g04850.1 vs. TrEMBL
Match: A0A0A0LN74_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G354110 PE=4 SV=1) HSP 1 Score: 243.0 bits (619), Expect = 2.1e-61 Identity = 115/136 (84.56%), Postives = 128/136 (94.12%), Query Frame = 1
BLAST of Cp4.1LG07g04850.1 vs. TrEMBL
Match: A0A061FMI7_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_034673 PE=4 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 3.3e-27 Identity = 74/141 (52.48%), Postives = 98/141 (69.50%), Query Frame = 1
BLAST of Cp4.1LG07g04850.1 vs. TrEMBL
Match: F6H184_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g08810 PE=4 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 6.3e-26 Identity = 73/139 (52.52%), Postives = 91/139 (65.47%), Query Frame = 1
BLAST of Cp4.1LG07g04850.1 vs. TrEMBL
Match: A0A0D2QZ62_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G221200 PE=4 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 1.1e-22 Identity = 71/147 (48.30%), Postives = 94/147 (63.95%), Query Frame = 1
BLAST of Cp4.1LG07g04850.1 vs. TrEMBL
Match: E0CP00_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g08820 PE=4 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 1.4e-22 Identity = 66/141 (46.81%), Postives = 83/141 (58.87%), Query Frame = 1
BLAST of Cp4.1LG07g04850.1 vs. TAIR10
Match: AT1G10140.1 (AT1G10140.1 Uncharacterised conserved protein UCP031279) HSP 1 Score: 97.4 bits (241), Expect = 7.1e-21 Identity = 62/157 (39.49%), Postives = 90/157 (57.32%), Query Frame = 1
BLAST of Cp4.1LG07g04850.1 vs. TAIR10
Match: AT1G58420.1 (AT1G58420.1 Uncharacterised conserved protein UCP031279) HSP 1 Score: 83.2 bits (204), Expect = 1.4e-16 Identity = 66/166 (39.76%), Postives = 92/166 (55.42%), Query Frame = 1
BLAST of Cp4.1LG07g04850.1 vs. NCBI nr
Match: gi|659087588|ref|XP_008444532.1| (PREDICTED: uncharacterized protein LOC103487823 [Cucumis melo]) HSP 1 Score: 249.6 bits (636), Expect = 3.2e-63 Identity = 118/136 (86.76%), Postives = 131/136 (96.32%), Query Frame = 1
BLAST of Cp4.1LG07g04850.1 vs. NCBI nr
Match: gi|778670932|ref|XP_011649558.1| (PREDICTED: uncharacterized protein LOC105434639 [Cucumis sativus]) HSP 1 Score: 243.0 bits (619), Expect = 3.0e-61 Identity = 115/136 (84.56%), Postives = 128/136 (94.12%), Query Frame = 1
BLAST of Cp4.1LG07g04850.1 vs. NCBI nr
Match: gi|590596880|ref|XP_007018459.1| (Uncharacterized protein TCM_034673 [Theobroma cacao]) HSP 1 Score: 129.4 bits (324), Expect = 4.8e-27 Identity = 74/141 (52.48%), Postives = 98/141 (69.50%), Query Frame = 1
BLAST of Cp4.1LG07g04850.1 vs. NCBI nr
Match: gi|359491947|ref|XP_003634344.1| (PREDICTED: uncharacterized protein LOC100267722 [Vitis vinifera]) HSP 1 Score: 125.2 bits (313), Expect = 9.0e-26 Identity = 73/139 (52.52%), Postives = 91/139 (65.47%), Query Frame = 1
BLAST of Cp4.1LG07g04850.1 vs. NCBI nr
Match: gi|1009135230|ref|XP_015884875.1| (PREDICTED: uncharacterized protein LOC107420429 [Ziziphus jujuba]) HSP 1 Score: 124.0 bits (310), Expect = 2.0e-25 Identity = 77/147 (52.38%), Postives = 96/147 (65.31%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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