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The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGAGTTTCAAAAACCAAAAACTTAAACTTAGGAAAGTAATCGACATCCCAAAATCAGAAGGACATTTTCGTAAACAAAACTAGAAGGGCATTTTCGTAAACTCACATGACCCACCACCAAAAGAATTCAAGGTTCTCTATATATAATGCAAGCTAGCATCTTACCTTTCTCCCATAATATCCACTTTTCCTCACCAAAACACACACAAACACATTCACCTTCTTCTTCCTCCATAGACAAAAACAGAGCACAGCTTCAATAAAACAGAGCATCTTCAATCTTTCCAACCCAGAAACCGATCAAAACATGGATCAAATCCAAAAGGCAGCCATGGAAGAGCTGAAGAACAACAAGAACAACAAGAACATGAACAAGAACAAGAACAAGAACACTGATCAAACACTAAAAAAGGTAACAAAATTGTTGTTTTCTCTGTCTCTGTTTTCCTTCCTCTTCGCTCTTCCACTACCCACTTGCCTCCCTTTCCACCTCTTCCATAATTCCCCAAATTCCCGCTTCCATTTTCTCAACCAACCAATCGACAAGAACTCCATGTTCCTCCTCTGCAACGCCCTCCTCGTATTCCTCGCAAATTACTCTGGTCTCTTCAAATCCCTCTCCTCTTCCTCAAGGAGCTTCGACCCCTGTTCCAAACTCTACGATTTCGGGCCTCTGTCGGACCCAATTACGACGGAGCTGGTTCAGAAACCGCCGCTGATTCCGACAGAAACCGCCGCCGATGAAAAGAACGATGACCCAGATGAAAGAATCGTTTCAGCTCCAGAAAATGGCGAAGAAGACGAGAGCTATCGATTAGCGGCGAGGTTTTTTGCGGCTGAAACAGGGGAAGTTGAGGATACGGCGGCGGCAGCGGCGGCGGCGGAGGAGGAGGAAGAAGGGAACGGCGGCGTGCTGAGTGATGAAGAATTGAAGAGAAAGTTTGATGAATTCATTAAGAGAATGAAGGAAGAAATCGTTCTAGACGATGCTACAAGAACTCTAGTGGTGGTTTGATTAGTAATTAAATTTGGGCTAAATTGCTCAAAAAATATTTTTATTCTTTTGAAAATTACAATATTGCCCTTGACCTCTCGTGAATGTTTCGAAACCGCTTTAAGAGTAGAAATTTCTTAAAATTTTGGATGAAAATCGAGACTTGAAACGGATGTAGCTTAACTAATAGGTGAGATGATGTTCGGGTCATAATTTACGTTCCTAGTTAAATGCTACACTGTTCCAAGTCATGATTGAAGCGATTAAGAAGGTTGAAGGGTAATATTGTAATTTTCAAAATAATAAGAGTATTTGTTTAAACAAGGATGATGTTTAGGGGTATTTTGGTAATTTAGTCTTAATTTTATTAAAATTATAAGGTTAAATATATGATGCCAAAAAAGGCTTGTAATGTATATTTTTATTTCCTTATTCATCCTATTTTGTTGGTTGGATAATTATTTAGTTTTTATTTATTTTCTTTTTCTGAGTAAAAATTAA mRNA sequence ATGAAAACCGATCAAAACATGGATCAAATCCAAAAGGCAGCCATGGAAGAGCTGAAGAACAACAAGAACAACAAGAACATGAACAAGAACAAGAACAAGAACACTGATCAAACACTAAAAAAGAAACCGCCGCTGATTCCGACAGAAACCGCCGCCGATGAAAAGAACGATGACCCAGATGAAAGAATCGTTTCAGCTCCAGAAAATGGCGAAGAAGACGAGAGCTATCGATTAGCGGCGAGGTTTTTTGCGGCTGAAACAGGGGAAGTTGAGGATACGGCGGCGGCAGCGGCGGCGGCGGAGGAGGAGGAAGAAGGGAACGGCGGCGTGCTGAGTGATGAAGAATTGAAGAGAAATAAAAATTAA Coding sequence (CDS) ATGAAAACCGATCAAAACATGGATCAAATCCAAAAGGCAGCCATGGAAGAGCTGAAGAACAACAAGAACAACAAGAACATGAACAAGAACAAGAACAAGAACACTGATCAAACACTAAAAAAGAAACCGCCGCTGATTCCGACAGAAACCGCCGCCGATGAAAAGAACGATGACCCAGATGAAAGAATCGTTTCAGCTCCAGAAAATGGCGAAGAAGACGAGAGCTATCGATTAGCGGCGAGGTTTTTTGCGGCTGAAACAGGGGAAGTTGAGGATACGGCGGCGGCAGCGGCGGCGGCGGAGGAGGAGGAAGAAGGGAACGGCGGCGTGCTGAGTGATGAAGAATTGAAGAGAAATAAAAATTAA Protein sequence MKTDQNMDQIQKAAMEELKNNKNNKNMNKNKNKNTDQTLKKKPPLIPTETAADEKNDDPDERIVSAPENGEEDESYRLAARFFAAETGEVEDTAAAAAAAEEEEEGNGGVLSDEELKRNKN
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
Term | Definition |
GO Assignments
This mRNA is annotated with the following GO terms.
Category |
Term Accession |
Term Name |
biological_process |
GO:0008150 |
biological_process |
cellular_component |
GO:0005575 |
cellular_component |
molecular_function |
GO:0003674 |
molecular_function |
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
Cp4.1LG06g08370.1:cds:001 | Cp4.1LG06g08370.1:cds:001 | CDS |
Cp4.1LG06g08370.1:cds:002 | Cp4.1LG06g08370.1:cds:002 | CDS |
Cp4.1LG06g08370.1:cds:003 | Cp4.1LG06g08370.1:cds:003 | CDS |
Cp4.1LG06g08370.1:cds:004 | Cp4.1LG06g08370.1:cds:004 | CDS |
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Type |
Cp4.1LG06g08370.1 | Cp4.1LG06g08370.1-protein | polypeptide |
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | unknown | Coil | Coil | coord: 15..35 scor |
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