Cp4.1LG06g05960.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGTTGCCATATTTCCAGATGCCATTTTCTCAGAACTCTCTCCCATGCAGAGTCTCTCTCTCTCTCTCCAGCTCTGCCTTTTTGCCGCGATTTTCCCGTGCTCTAATTCGTCTACATTCTCCTCTTGCTGTAAGCTTTTGTTTCATCGCATCGCTTTTATTAACTCGCTTCAATTAATTTCCGTTACTTACTTGATTTGCGTTGTTTTTTGATCCATTATGATATAGGAATGATTCTGTAGTTTAAATATCAACAATCGCACTTTATTCACTTAGGTTCATTGGATTTCTGTGTGATATAAGAAAATGTGAGTGGTGGAAGATGAAAAAGGAAGCGAAAATTGATGGACGAACTTTCGATAGTTGTTTTTCTTTGGTATTGTCATAAGAAAGTGTGATTGAGGGGATTTTTGGCGTGGTTTTTTTTTTCTTTTTTTTCCCCTTGATCATTAGTTGTATCTGTCACTATTTTTTCAGTGAACTCAATTCCGTTCCTGTTAAATAATCAATAGCACGGTGCCAAAATTCTGAAGACTGCTTGATAATCGAGAGAAAACGGATTAGTTTTTGAGTTGTTTTGTTGAAGGAATCTGGTCTATCTCCCTGTGGTGCACACTGAAATTGGGGAATAACACTCGTACGTTATTGTAGACTTTTGAGATGCATCGATGCTATTTTCTTCTTTCGTCTTTTATGTTAAGATTCAGTTAATAAAAAGGTCCACTATCCTTATATTCTCAAGTTCTTCTTATCACGGGATTCTGGGTGTCCGGACTGTGAAGTAATGGCCTGCACTGCATAATCTAATGATTAGCTTTGGAGGAGATTTTGGTATCAACTTTGTACCTGCTTAAATGATATCAAAATTTATTATGCAACTTCCTCAGCCCCAGTTTGGTTGAAGTGATTTGTTTGTTATGCAGAATTTGGATTCAATAAATCTGGTTACAGCTTCGGGAAAGTCATTGGCATGTAGTTTTGCAAGAAAGGTAGCAGTACTGGTGGGTTCAATGGCTTTGCTATACGAGTTTCTGAATATCACAATATTATTTATCACGTGGCCTTTCTCGTTTTTCATAAGTACATGCTCATTAATCTTGAAAACCTTTGTTGTTGTCGTTCAAACTTGGTTGGAGCTGTTGAAAACCTCGGTCAGTCTTCACTTGAATATATTGTGGACAACTTTGATGTGGATAATTGCGTTTGTCTCCCTTCCTGGACGAATTTTAGCTGCTTTAAAGAGGGAAAGGCAGGTTAGCCCTCTCGCCCTGTTGTTTCTTGATTGCCATCTGTGCTTGTTCAATGATGATGTACTTTGTTTCTGTCTTTTCTTTTGTCTGTTTTCGATTTGAGATTTGTCTTTGAGGAAAATATGCACATAGAAAAATATTCTTCAACTTACGGTAGTAGATTTAGACTTAAACTTTTCATAGACAACAATATGACGATTCCCTTTGCCTACACATAGGAGTTAACTGCCTACTCAAATTTCATAGACATGACACTAATTTCAGATATAATCAGGTGTGATATTAAAGTGGTAGATTTTGAAAAGTTCAAATAATTACAAATGTTTCCTGAGTTCGAAATTTATTCTGAAGTCCTTAATATTCAAAAGCTAAAAAATGTTATGTTAATAAGTTATAATAACTTGGAAAGGGATTAGGAAACATACCATCGAGTTCTTTGCAGCCTGAGTAATGAAACAACAATTTGAATTGTTTTACTTATTACTAATCGATTGGAGAAGTGTTGTTCAAGCTTTTGTTTGTTCAAGTTCATATTATTGACATTTTGAATTTGTTCTTATGTTTGGTATGAGTATAGCAGAAAGTTCATATTATTGACATTTTGAATTTGTTCTGATTTTGTTTGTTGGTCGCTTATGGGATCTTTACTAGTCAATTAAGTAATTGAAGTATTGGAGTACCAAGTCGGCTACTTAGGAACATGCTGTTAATTTGGTTTTGCGATTTTTTTACTTGATAATGATTGATTTTATGCAGTTGCAAAAAAATTTGCAATTTCTGGCAATTGAGTTCGACAATGTTTTGTGGGAAAGAAAGGAGCTTCAAAAACAATTCCAGACTGCTATGAAAGAGCAGAAGATGATGGAGTTAATGTTAGACGAACTTGAAATGATACATGAAAAGGCGACCAACAAGATTGCACTCTTAGAAAGTGAGGTAATGGCCTATCTATCTCCTTCAGGCTCTAGCTCCTGTACTAAATGTCATAAATTACATTGTGGAAGGTTAAAACTCAGAGCGACTACCATAGTTTCAATAAGAAGTGGAGGGAGGAATTTATGCAGTTGGTAAAGGAGAGGTTGAACTTTGACATCAAAACTTGGTTTATTTCTTATGAGTTGAACCTCTTATATCTTTCAAGAACTCAGTGGAAAATTCCGTACAATGTATTAACAAATAAAATCTCTCTCTCTCACACACACACACATGCAATGACACAGTTATAATGTGAATGTAACTTTTAAGACGTTAGAATTTGCAGCAAAACTGTTTCCTGTTCTTTTGTCCCATGCTCCATGTGCAACTGGTTTGAGTTACTGTAATCTCTCATGGAATGATATTAACGTGAATTTGTGTTGATGAGTGCAATAAAACATTGATGTAAATTGATTCCGAGAAAGGAAAATGTGTTTTCCTTTTACTCTTTAGGTTGCTTAAAAAATCACCTGGAAATCTTTGCTTGTGTTGAACCATGTGGTTCTGAATTCTGAAAAATATTGCTACTCAGTTGTGATATTTCAAGTAATACCAGCCAATGGTTTACATGAAGCCAAGGAAATTGCCGGTTCATATTTTTCAACAATATATGCCTATTTAGGATTCATACTAGTTTGTTCTTTCACTCTTGACATGTTTTTCCTAAATTTACTCAAAATCACACAGCGATCTGTAATCTATTAAGTTAGACCAAAGCTATTCCTTTTAAGTTTCTACCTAGTTGCTTTGGAAATTCAATTGTGTCCCAAGTTCAAGGCAGGCTCCTGCAGCCAGCAGCCAGATAGTCTAATCTTTGTTATAAGGTGGTTAGTTGTTTTGTTATTTGCAAGTGGTTGAGCTGTAATTAGTTATATATTTAAGAGTTAGTTTGTTCTGTTATTTTCCGTCTGGTTTTCTTTTTAAGGAGCTTCGATCAGGCTTGTAAAGCATCTGAATATGTCAATAATACATTCTGCTAATGCATCGCATCAAAATTTCTCTGGTGTGAATTAACATTAGTTGTGTGTATTGACATGTGGAATGGGATGTTTAATTATTTACTAGTCCTGTGAGTTTTTCTCCAAAATTATAATATAGCTAAGTTTTCGGCATTTTGGACTTCTCATTAAAATCCTTTACTGCAACAGCATGCATCATTCTTCTTGAGCAATCATTCTTAATAATTGTCACAAGGTTATGCAAAGAGTTCAAATCAATTTTAGCTATCTTGCATTCTTATGTAGAGAAAGAGGAAAGACACGACCATGGTTGTGTGTAGGATGGGAAAATGTCAGTTCATGTGAATGATTATGTCATAACCTCGACTGTCTATTCTTGTTATTGTTGCGTGATATGTTAATAGTAGCTTAGCAATATTTCCTGCTTCCAATAAACTGTTTGCCATAATTTGTTCCATCAGGTTCAGAAATTGAGAAATGAAAATCTTCGACTACAAGAAATCAAGGGTAAGGCATATTGGAGCTTAAAAGGTATTGATGTCAAAAGTGAAGCACAAAAAACTGGCAGAGTTGGCAGCGACATTACCTACGGTATCTCATCATGCTCATCCAGCTATAGTGACAGCAGCCTTGTTCAAGACCTCTCTCGAAGTGATGCTTTGAAAGACGGTAATGTATCTAAAGAAAAATTTATCAAAATTTTAGAATCTGGGTTTCAATCTGGTGTGCTCATCCACAATCATACTTCCGAAATCCTATCAGAAGATGAAGATATCACTGAAATTCTTGATGAACAAAGGGAGGTTGCAGTTCACCGAAGTCTATTCAGTACCCTATTGTCGCTTTTGGTTGGAGTGATTATATGGAAAGCTGAAGAGCCTCACTTGTGCCTCGTAGTGGCTCTCATGTTTGTGGTTAGCATCTCATTGAAGAGCGTAGTTGAGTTCTTCACCACTATTAAGAATAAACCTGCTTTGGATGCTGTTGCTCTTTTGAGCTTCAACTGGTTTGTGCTTGGAATACTGGCTTATCCAACACTGCCAAATATGGCTCGTGTGCTTGCCCCTCTGGCCTCAAGGGTTGTCTGAAAGAACGAACGTGGAATGGTTCGGTTTCTCCATATCCTGATTCGCTCAGAACTACTTGGCCTGGAAAGTTGAGAGGTACATCACCTAATACCACTAGACAGACGTTAGATCATAAAACTTTATCTTCCAGTCGTGAATTCCCGTAGCATGTTATATCATCACGTTTGAGAAATTTTGATGCTTGAAGATGAGGATGCAATAGTGTTTTATATATATAAACATGGATGCAAGTAGTGTTTATAACTTGTAAATGTTTCAAGACTTTCTACTTGAATCTAACTTATTGGTTC ATGGAGAATCTGAATTTGGATTCAATAAATCTGGTTACAGCTTCGGGAAAGTCATTGGCATGTAGTTTTGCAAGAAAGGTAGCAGTACTGGTGGGTTCAATGGCTTTGCTATACGAGTTTCTGAATATCACAATATTATTTATCACGTGGCCTTTCTCGTTTTTCATAAGTACATGCTCATTAATCTTGAAAACCTTTGTTGTTGTCGTTCAAACTTGGTTGGAGCTGTTGAAAACCTCGGTCAGTCTTCACTTGAATATATTGTGGACAACTTTGATGTGGATAATTGCGTTTGTCTCCCTTCCTGGACGAATTTTAGCTGCTTTAAAGAGGGAAAGGCAGTTGCAAAAAAATTTGCAATTTCTGGCAATTGAGTTCGACAATGTTTTGTGGGAAAGAAAGGAGCTTCAAAAACAATTCCAGACTGCTATGAAAGAGCAGAAGATGATGGAGTTAATGTTAGACGAACTTGAAATGATACATGAAAAGGCGACCAACAAGATTGCACTCTTAGAAAGTGAGGTTCAGAAATTGAGAAATGAAAATCTTCGACTACAAGAAATCAAGGGTAAGGCATATTGGAGCTTAAAAGGTATTGATGTCAAAAGTGAAGCACAAAAAACTGGCAGAGTTGGCAGCGACATTACCTACGGTATCTCATCATGCTCATCCAGCTATAGTGACAGCAGCCTTGTTCAAGACCTCTCTCGAAGTGATGCTTTGAAAGACGAAGATGAAGATATCACTGAAATTCTTGATGAACAAAGGGAGGTTGCAGTTCACCGAAGTCTATTCAGTACCCTATTGTCGCTTTTGGTTGGAGTGATTATATGGAAAGCTGAAGAGCCTCACTTGTGCCTCGTAGTGGCTCTCATGTTTGTGGTTAGCATCTCATTGAAGAGCGTAGTTGAGTTCTTCACCACTATTAAGAATAAACCTGCTTTGGATGCTGTTGCTCTTTTGAGCTTCAACTGGTTTGTGCTTGGAATACTGGCTTATCCAACACTGCCAAATATGGCTCGTGTGCTTGCCCCTCTGGCCTCAAGGGTTGTCTGAAAGAACGAACGTGGAATGGTTCGGTTTCTCCATATCCTGATTCGCTCAGAACTACTTGGCCTGGAAAGTTGAGAGGTACATCACCTAATACCACTAGACAGACGTTAGATCATAAAACTTTATCTTCCAGTCGTGAATTCCCGTAGCATGTTATATCATCACGTTTGAGAAATTTTGATGCTTGAAGATGAGGATGCAATAGTGTTTTATATATATAAACATGGATGCAAGTAGTGTTTATAACTTGTAAATGTTTCAAGACTTTCTACTTGAATCTAACTTATTGGTTC ATGGAGAATCTGAATTTGGATTCAATAAATCTGGTTACAGCTTCGGGAAAGTCATTGGCATGTAGTTTTGCAAGAAAGGTAGCAGTACTGGTGGGTTCAATGGCTTTGCTATACGAGTTTCTGAATATCACAATATTATTTATCACGTGGCCTTTCTCGTTTTTCATAAGTACATGCTCATTAATCTTGAAAACCTTTGTTGTTGTCGTTCAAACTTGGTTGGAGCTGTTGAAAACCTCGGTCAGTCTTCACTTGAATATATTGTGGACAACTTTGATGTGGATAATTGCGTTTGTCTCCCTTCCTGGACGAATTTTAGCTGCTTTAAAGAGGGAAAGGCAGTTGCAAAAAAATTTGCAATTTCTGGCAATTGAGTTCGACAATGTTTTGTGGGAAAGAAAGGAGCTTCAAAAACAATTCCAGACTGCTATGAAAGAGCAGAAGATGATGGAGTTAATGTTAGACGAACTTGAAATGATACATGAAAAGGCGACCAACAAGATTGCACTCTTAGAAAGTGAGGTTCAGAAATTGAGAAATGAAAATCTTCGACTACAAGAAATCAAGGGTAAGGCATATTGGAGCTTAAAAGGTATTGATGTCAAAAGTGAAGCACAAAAAACTGGCAGAGTTGGCAGCGACATTACCTACGGTATCTCATCATGCTCATCCAGCTATAGTGACAGCAGCCTTGTTCAAGACCTCTCTCGAAGTGATGCTTTGAAAGACGAAGATGAAGATATCACTGAAATTCTTGATGAACAAAGGGAGGTTGCAGTTCACCGAAGTCTATTCAGTACCCTATTGTCGCTTTTGGTTGGAGTGATTATATGGAAAGCTGAAGAGCCTCACTTGTGCCTCGTAGTGGCTCTCATGTTTGTGGTTAGCATCTCATTGAAGAGCGTAGTTGAGTTCTTCACCACTATTAAGAATAAACCTGCTTTGGATGCTGTTGCTCTTTTGAGCTTCAACTGGTTTGTGCTTGGAATACTGGCTTATCCAACACTGCCAAATATGGCTCGTGTGCTTGCCCCTCTGGCCTCAAGGGTTGTCTGA MENLNLDSINLVTASGKSLACSFARKVAVLVGSMALLYEFLNITILFITWPFSFFISTCSLILKTFVVVVQTWLELLKTSVSLHLNILWTTLMWIIAFVSLPGRILAALKRERQLQKNLQFLAIEFDNVLWERKELQKQFQTAMKEQKMMELMLDELEMIHEKATNKIALLESEVQKLRNENLRLQEIKGKAYWSLKGIDVKSEAQKTGRVGSDITYGISSCSSSYSDSSLVQDLSRSDALKDEDEDITEILDEQREVAVHRSLFSTLLSLLVGVIIWKAEEPHLCLVVALMFVVSISLKSVVEFFTTIKNKPALDAVALLSFNWFVLGILAYPTLPNMARVLAPLASRVV
BLAST of Cp4.1LG06g05960.1 vs. TrEMBL
Match: A0A0A0KWK5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G242360 PE=4 SV=1) HSP 1 Score: 397.9 bits (1021), Expect = 1.3e-107 Identity = 227/293 (77.47%), Postives = 243/293 (82.94%), Query Frame = 1
BLAST of Cp4.1LG06g05960.1 vs. TrEMBL
Match: M5WAX0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007274mg PE=4 SV=1) HSP 1 Score: 268.5 bits (685), Expect = 1.2e-68 Identity = 160/331 (48.34%), Postives = 221/331 (66.77%), Query Frame = 1
BLAST of Cp4.1LG06g05960.1 vs. TrEMBL
Match: A0A151QUL5_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_045073 PE=4 SV=1) HSP 1 Score: 250.8 bits (639), Expect = 2.5e-63 Identity = 145/324 (44.75%), Postives = 213/324 (65.74%), Query Frame = 1
BLAST of Cp4.1LG06g05960.1 vs. TrEMBL
Match: A0A059CJK0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D02571 PE=4 SV=1) HSP 1 Score: 249.2 bits (635), Expect = 7.4e-63 Identity = 150/340 (44.12%), Postives = 221/340 (65.00%), Query Frame = 1
BLAST of Cp4.1LG06g05960.1 vs. TrEMBL
Match: K7K407_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_01G152500 PE=4 SV=1) HSP 1 Score: 247.3 bits (630), Expect = 2.8e-62 Identity = 154/341 (45.16%), Postives = 217/341 (63.64%), Query Frame = 1
BLAST of Cp4.1LG06g05960.1 vs. TAIR10
Match: AT5G45310.1 (AT5G45310.1 unknown protein) HSP 1 Score: 187.6 bits (475), Expect = 1.3e-47 Identity = 125/319 (39.18%), Postives = 199/319 (62.38%), Query Frame = 1
BLAST of Cp4.1LG06g05960.1 vs. NCBI nr
Match: gi|659087042|ref|XP_008444246.1| (PREDICTED: uncharacterized protein LOC103487633 isoform X1 [Cucumis melo]) HSP 1 Score: 492.3 bits (1266), Expect = 7.2e-136 Identity = 279/348 (80.17%), Postives = 295/348 (84.77%), Query Frame = 1
BLAST of Cp4.1LG06g05960.1 vs. NCBI nr
Match: gi|449466217|ref|XP_004150823.1| (PREDICTED: uncharacterized protein LOC101204571 isoform X1 [Cucumis sativus]) HSP 1 Score: 483.0 bits (1242), Expect = 4.3e-133 Identity = 276/352 (78.41%), Postives = 294/352 (83.52%), Query Frame = 1
BLAST of Cp4.1LG06g05960.1 vs. NCBI nr
Match: gi|778692635|ref|XP_011653498.1| (PREDICTED: uncharacterized protein LOC101204571 isoform X2 [Cucumis sativus]) HSP 1 Score: 426.4 bits (1095), Expect = 4.8e-116 Identity = 243/310 (78.39%), Postives = 259/310 (83.55%), Query Frame = 1
BLAST of Cp4.1LG06g05960.1 vs. NCBI nr
Match: gi|778692641|ref|XP_011653500.1| (PREDICTED: uncharacterized protein LOC101204571 isoform X4 [Cucumis sativus]) HSP 1 Score: 424.5 bits (1090), Expect = 1.8e-115 Identity = 241/308 (78.25%), Postives = 257/308 (83.44%), Query Frame = 1
BLAST of Cp4.1LG06g05960.1 vs. NCBI nr
Match: gi|778692638|ref|XP_011653499.1| (PREDICTED: uncharacterized protein LOC101204571 isoform X3 [Cucumis sativus]) HSP 1 Score: 422.2 bits (1084), Expect = 9.1e-115 Identity = 240/307 (78.18%), Postives = 256/307 (83.39%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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