Cp4.1LG06g05630.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTGTCCTCTAGAAACTTTAGCAGATGGCTCATTTGCCGGCCGAATCAGAGCCGAACAAAAATTTGTCCGTGATCATCCTCGATTCTTTAGCAAACAAATTCAAGAAGAAATCAAATTAACTATGAACAGCTTCAATTCAAGTTCGAATTCTGTCTCCTCCTCATTGTCGTTTCGTGTTCGTCCTTGCCTTTGCTCTCGCTATCTCTTACTGTAATTTATTTGTAATTTCTTTGTATATATGATCATGAACTCTAGGTGTTTTGACTGCGAGAGTCAATTTTGGTTGTGTTTTTTTAACTTTTGATCCAATTTGTCACTGTGTTGCTCTTGATCGAGGCGGCTGGAGCAGAGATGAAGAGGTGTAGAAATGGCGAACTCTGGGATTTTGAGCACGAGATTCTTGGCGGAGATGATATTATACTTGGAATCGACGGCGGCACCACTTCCACTGTTTGTGTTTGTATTGCTCTTTCCGATCCTCGAGCTATTTCTCCTTCAATGGCTTGTCCTATGCTCGCTCGTGTTGTTGGTGGCTGCTCAAACCATAATAGCGTTGGCGGTACTTCACTATCTTTGTCACTTCTCCCTGATTTAGCTATGTTTTCCGCCATTGCAGCATCAAATTGGACCTTGAATTGACTTTACTTCTTTAAAGAGCCATCGCTTGTATGATCTCGTCCCAAATGGCACAAACGAGTAAACACTTCAGACGATTGAAGGGTTGATTAGAACTCCTTATCGCGTTTTGTTAAGTATCAAATTTAGTTGTCTAGTGTCCGTGTTGATCTCTATTGTAAGCATATCTGATTCCTTCATCATGAATTTGAATGCTAAAAATATGATAACCTTCTGCCATCTCTAGAAACTGCTGCGAGGGAAACACTGGAGCAAGTTATGGCGGAGGCACTTTCAAAGTCTTGTTCAATTCGATCTTCAGTTCGAGCTGTGTGCCTAGCTGTTTCTGGAGTCAACCATCCAACGGATCAAGAAAGAATTCTGAATTGGCTAAGGTATTCATTCTTCTATTAACTGTGAATCCGTAGAGTTTTAAATTTTATTCTTTCTTTTTGTTCGTCATTGGTTAGCCGCTTTCTATTTATACTCTTACCATCCCCTCTAATGGGATTAGGTAATGCGTAGGAATAAAACATGAGCTCAACGAGACTTGATATCATGAACTGCAAATGAACAGGGATATCTTTCCGTGCCATGTAAACCTGTATGTTCAAAATGATGCTGTGGCGGCTCTTGCAAGTGGCACTATGGGAAAGCTCCATGGATGCGTTTTAATTGCTGGAACTGGAACAATTGCATATGGATTCACAGAGGATGGTCGAGAAGCTCGAGCTGCTGGTGCAGGACCAATCTTAGGTGATTGGGGAAGGTGGATTTTTCATTTTGTTCACTAATCCTCTCTCTCTCTCTCTCTCTCACACACACACACTGTTAAAATTCTGGCATAGGTTGGTGTAAACAAAATTGAGGTATAATTATTTAGCCTGATCTAGGAGACCCTTCTGCGCTTTCTAAATTTTCTGATGAACATTTGGTACCAAGTGTAATAGCCCAAGCCTAACCCCACCGGTCACAGACATGGTGCATTTTCTTTGAGTTTTCTCTTTTGGGCTTTTCTCTCAAGATTTTTAAAACGCGTGGAGAGGTTTCCACACCTTTATAAAGGATGTGGGACCTCACAATCCACTCACTTCGGGGTCGAGCGTCCTCGCTAGCACTTGTTCCCCTCTCCAATCGATGTGGGACCCCCCAATCCACCCCTTTGGGGCCTAGCGTCCTCGTGGCACACCGCCTGGTGTCCACCCACTTCGGAGTTTAGACTCCTCACTGGCACATCGATTAGTGTTTGGCTCCGAGTCTCTTATATCATTTGTAACTGCTGAAGCCCACTGGTAACAGATATTGTCTTCTTTGGGTTTTTCTCAAAGTTTACCATTTGTAACAGCTCAATCCCACCACTAACAGATATTATCCTCTTTGGATTTTCCTTATGATTTTTAAAACGTGTCTGCTAGGGAGAGGTTTTCACGCACTTATAAAGAATTCTTCATTCCTCTCTCCAACTAACGTGGGATGTCGAGTAAGTCTGAAAAGTAGTTTAAACATGCCCCTTCCTCTAGAGTCTGGCTAAAGGTCGATGCTCTTGAACAATCTGTTTCCGGTGCTTAATCATTTTATTTTTTTATCTTTCATTCTTTTTTGTAAAAAAGAGTAGTAGTGGGATGAACAGACCCAATATATGTTAATTTTTAACTCTTGATCTATCGCACCACTGTTTGAAAACTGATGTTTATGTTCTTGCAGTGGATATGGGATAGCTGCACAGGCGTTAACCGCAATAATTAGGGCTCATGATGGACGTGGTCCTCATACAATGCTCACTTACAGCATTTTGAAGACACTTGATCTTTCTTCACCAGATGAACTAATAGGGTATGTATTTAAAATACTTAAGATTGCAGTTATATTAAGTCTCATGTTATCTGGTCATTATTTTACCATCAATATTAATATTAGGTGGACATATGCGGATCCATCCTGGGCTCGAATTGCTGCTCTCGTTCCAGTTATTGTAGCATGTGCTGAGGCAGGCGATGAGGTTGCTGACAACATCCTCCTCGACTCAGTTGAAGAATTGGCTTCAAGTGTGAAGGCTGTTATTCAAAGACTCGGCCTGGCTGGTGAAGGTATGAAATCAAACAGTATTCATTATTAGCACTATGTTTATCCCTTGAGATAATTACACTTTGTTTTGCAATCTTCTTCATCTGTTTGAGTTATAATCCCTTGTGCAGATGGACAAGAGGCTTTTCCGCTTGTTATGGTTGGTGGTGTACTCGAAGCAAAAAGAAGGTGGGACATAGCAAAAAAAGTCATAAATTCAATATCCAAAGAATACCCCGGAGTTCTTCCTGTTTGGCCCAAGGTAGTCTTATTTTCCTCTCTTTACTTTGCCTTATTGCAATTGTGGCGTGAGATCCTACGTCGGTTGGAGAGGGGAACGAAACATTCTTTATAAGAGTGTGGAAACCTCTCTCTAGAGACGCGTTTTAAAAACCTTGAGGGGAAAACCCGAAAGGGAAAGCCCAAAAAGAACAATATTTGCTACTGGTAGGCTTGGACTATTACAAATGGTATCAGAGTCAGACACCAGGCGGTGTGCCAACGAGGACGCCAGACTCCCAAAGGGGGTGGATTGTGAGATCCCATATCGACTGGAGAGAGGAACGAGTGCCAGAGAGGACACCGTCCCTAAAAGGGGGGTAAATTGTGAGATCCCCACATTGATTGGAGAGGGAAATGAGTGCCGAAGAGAATGCTAGGCTCCGAAATGAAACATTCTTTAGAAGGGTGTGGAAACCTCTCTCTATCATTTTTAAAAAAAATCTTTGAGAAAAAGTTCAAAGTGGACAATATTTGCTAGCGGTGGGCTTGGATTTCATTCATTTACTCATTAATTTAGAGAATGAGAACCATCTTCTAGATACCCTCGTGTTCGTGAGCTCACAATTGAAGAGAAGCAACCGGTGCCTAAGTGGTTGAGTGTATAGTTATCCCACATCATTTGCTTAAAATGGGAATCAGAAACGAAAGTGATCCCTTTGTTTCTTACGGTTCAAAGTCCTCATTGTTCTTAACAGGTGGAACCGGCACTTGGTGCAGCATTACTAGCCTGGAATTTTTTGAGCAAGGATTATCAGCAGGAAGGAATATAGAGGGTGTTCTTTCTTTAGCTTCACGAGAAAGGGCTGATGAACATGAACTGTACAGTTTGATTGTCAGACCAAACCTAATTAGCGATGTTGGAAAGTTAAGGTAGAAACTTGAAGTAGTCTTAGCTTGTGTTAGTGTCCCAAGGTCTTCGTTGATTTTCATCGTTATTTTAGCTCTTCATGTTAAGATAGTATATATTTTTGAGTGATCCAATCTCTCGTCTGTATGGTAAACTGGATATGGAGGGAAAATCCAATTGAATGAAACCTTCTTTGATCCTCAGAACATTTTAAAATGGTTGGTGTATAAAATATC ATGTCTGCGGCTGGAGCAGAGATGAAGAGGTGTAGAAATGGCGAACTCTGGGATTTTGAGCACGAGATTCTTGGCGGAGATGATATTATACTTGGAATCGACGGCGGCACCACTTCCACTGTTTGTGTTTGTATTGCTCTTTCCGATCCTCGAGCTATTTCTCCTTCAATGGCTTGTCCTATGCTCGCTCGTGTTGTTGGTGGCTGCTCAAACCATAATAGCGTTGGCGAAACTGCTGCGAGGGAAACACTGGAGCAAGTTATGGCGGAGGCACTTTCAAAGTCTTGTTCAATTCGATCTTCAGTTCGAGCTGTGTGCCTAGCTGTTTCTGGAGTCAACCATCCAACGGATCAAGAAAGAATTCTGAATTGGCTAAGGGATATCTTTCCGTGCCATGTAAACCTGTATGTTCAAAATGATGCTGTGGCGGCTCTTGCAAGTGGCACTATGGGAAAGCTCCATGGATGCGTTTTAATTGCTGGAACTGGAACAATTGCATATGGATTCACAGAGGATGGTCGAGAAGCTCGAGCTGCTGGTGCAGGACCAATCTTAGGTGATTGGGGAAGTGGATATGGGATAGCTGCACAGGCGTTAACCGCAATAATTAGGGCTCATGATGGACGTGGTCCTCATACAATGCTCACTTACAGCATTTTGAAGACACTTGATCTTTCTTCACCAGATGAACTAATAGGGTGGACATATGCGGATCCATCCTGGGCTCGAATTGCTGCTCTCGTTCCAGTTATTGTAGCATGTGCTGAGGCAGGCGATGAGGTTGCTGACAACATCCTCCTCGACTCAGTTGAAGAATTGGCTTCAAGTGTGAAGGCTGTTATTCAAAGACTCGGCCTGGCTGGTGAAGATGGACAAGAGGCTTTTCCGCTTGTTATGGTTGGTGGTGTACTCGAAGCAAAAAGAAGGTGGGACATAGCAAAAAAAGTCATAAATTCAATATCCAAAGAATACCCCGGAGTGGAACCGGCACTTGGTGCAGCATTACTAGCCTGGAATTTTTTGAGCAAGGATTATCAGCAGGAAGGAATATAGAGGGTGTTCTTTCTTTAGCTTCACGAGAAAGGGCTGATGAACATGAACTGTACAGTTTGATTGTCAGACCAAACCTAATTAGCGATGTTGGAAAGTTAAGGTAGAAACTTGAAGTAGTCTTAGCTTGTGTTAGTGTCCCAAGGTCTTCGTTGATTTTCATCGTTATTTTAGCTCTTCATGTTAAGATAGTATATATTTTTGAGTGATCCAATCTCTCGTCTGTATGGTAAACTGGATATGGAGGGAAAATCCAATTGAATGAAACCTTCTTTGATCCTCAGAACATTTTAAAATGGTTGGTGTATAAAATATC ATGTCTGCGGCTGGAGCAGAGATGAAGAGGTGTAGAAATGGCGAACTCTGGGATTTTGAGCACGAGATTCTTGGCGGAGATGATATTATACTTGGAATCGACGGCGGCACCACTTCCACTGTTTGTGTTTGTATTGCTCTTTCCGATCCTCGAGCTATTTCTCCTTCAATGGCTTGTCCTATGCTCGCTCGTGTTGTTGGTGGCTGCTCAAACCATAATAGCGTTGGCGAAACTGCTGCGAGGGAAACACTGGAGCAAGTTATGGCGGAGGCACTTTCAAAGTCTTGTTCAATTCGATCTTCAGTTCGAGCTGTGTGCCTAGCTGTTTCTGGAGTCAACCATCCAACGGATCAAGAAAGAATTCTGAATTGGCTAAGGGATATCTTTCCGTGCCATGTAAACCTGTATGTTCAAAATGATGCTGTGGCGGCTCTTGCAAGTGGCACTATGGGAAAGCTCCATGGATGCGTTTTAATTGCTGGAACTGGAACAATTGCATATGGATTCACAGAGGATGGTCGAGAAGCTCGAGCTGCTGGTGCAGGACCAATCTTAGGTGATTGGGGAAGTGGATATGGGATAGCTGCACAGGCGTTAACCGCAATAATTAGGGCTCATGATGGACGTGGTCCTCATACAATGCTCACTTACAGCATTTTGAAGACACTTGATCTTTCTTCACCAGATGAACTAATAGGGTGGACATATGCGGATCCATCCTGGGCTCGAATTGCTGCTCTCGTTCCAGTTATTGTAGCATGTGCTGAGGCAGGCGATGAGGTTGCTGACAACATCCTCCTCGACTCAGTTGAAGAATTGGCTTCAAGTGTGAAGGCTGTTATTCAAAGACTCGGCCTGGCTGGTGAAGATGGACAAGAGGCTTTTCCGCTTGTTATGGTTGGTGGTGTACTCGAAGCAAAAAGAAGGTGGGACATAGCAAAAAAAGTCATAAATTCAATATCCAAAGAATACCCCGGAGTGGAACCGGCACTTGGTGCAGCATTACTAGCCTGGAATTTTTTGAGCAAGGATTATCAGCAGGAAGGAATATAG MSAAGAEMKRCRNGELWDFEHEILGGDDIILGIDGGTTSTVCVCIALSDPRAISPSMACPMLARVVGGCSNHNSVGETAARETLEQVMAEALSKSCSIRSSVRAVCLAVSGVNHPTDQERILNWLRDIFPCHVNLYVQNDAVAALASGTMGKLHGCVLIAGTGTIAYGFTEDGREARAAGAGPILGDWGSGYGIAAQALTAIIRAHDGRGPHTMLTYSILKTLDLSSPDELIGWTYADPSWARIAALVPVIVACAEAGDEVADNILLDSVEELASSVKAVIQRLGLAGEDGQEAFPLVMVGGVLEAKRRWDIAKKVINSISKEYPGVEPALGAALLAWNFLSKDYQQEGI
BLAST of Cp4.1LG06g05630.1 vs. Swiss-Prot
Match: NAGK_DICDI (N-acetyl-D-glucosamine kinase OS=Dictyostelium discoideum GN=nagk PE=3 SV=2) HSP 1 Score: 197.2 bits (500), Expect = 3.0e-49 Identity = 120/329 (36.47%), Postives = 183/329 (55.62%), Query Frame = 1
BLAST of Cp4.1LG06g05630.1 vs. Swiss-Prot
Match: MURK_CLOAB (N-acetylmuramic acid/N-acetylglucosamine kinase OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) GN=murK PE=1 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 3.2e-27 Identity = 101/317 (31.86%), Postives = 157/317 (49.53%), Query Frame = 1
BLAST of Cp4.1LG06g05630.1 vs. TrEMBL
Match: E0CTZ3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0028g01190 PE=4 SV=1) HSP 1 Score: 530.4 bits (1365), Expect = 1.6e-147 Identity = 271/350 (77.43%), Postives = 301/350 (86.00%), Query Frame = 1
BLAST of Cp4.1LG06g05630.1 vs. TrEMBL
Match: W9SHX8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_012708 PE=4 SV=1) HSP 1 Score: 530.4 bits (1365), Expect = 1.6e-147 Identity = 271/346 (78.32%), Postives = 299/346 (86.42%), Query Frame = 1
BLAST of Cp4.1LG06g05630.1 vs. TrEMBL
Match: A0A067KRZ1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05213 PE=4 SV=1) HSP 1 Score: 520.8 bits (1340), Expect = 1.3e-144 Identity = 267/351 (76.07%), Postives = 294/351 (83.76%), Query Frame = 1
BLAST of Cp4.1LG06g05630.1 vs. TrEMBL
Match: A0A059DD75_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A00888 PE=4 SV=1) HSP 1 Score: 519.2 bits (1336), Expect = 3.8e-144 Identity = 264/351 (75.21%), Postives = 304/351 (86.61%), Query Frame = 1
BLAST of Cp4.1LG06g05630.1 vs. TrEMBL
Match: B9IA59_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s14040g PE=4 SV=1) HSP 1 Score: 519.2 bits (1336), Expect = 3.8e-144 Identity = 266/352 (75.57%), Postives = 301/352 (85.51%), Query Frame = 1
BLAST of Cp4.1LG06g05630.1 vs. TAIR10
Match: AT1G30540.1 (AT1G30540.1 Actin-like ATPase superfamily protein) HSP 1 Score: 447.6 bits (1150), Expect = 7.1e-126 Identity = 224/321 (69.78%), Postives = 263/321 (81.93%), Query Frame = 1
BLAST of Cp4.1LG06g05630.1 vs. NCBI nr
Match: gi|659129372|ref|XP_008464652.1| (PREDICTED: N-acetyl-D-glucosamine kinase-like [Cucumis melo]) HSP 1 Score: 659.1 bits (1699), Expect = 4.4e-186 Identity = 331/350 (94.57%), Postives = 338/350 (96.57%), Query Frame = 1
BLAST of Cp4.1LG06g05630.1 vs. NCBI nr
Match: gi|449463605|ref|XP_004149522.1| (PREDICTED: LOW QUALITY PROTEIN: N-acetyl-D-glucosamine kinase-like [Cucumis sativus]) HSP 1 Score: 655.2 bits (1689), Expect = 6.4e-185 Identity = 329/350 (94.00%), Postives = 336/350 (96.00%), Query Frame = 1
BLAST of Cp4.1LG06g05630.1 vs. NCBI nr
Match: gi|1009127369|ref|XP_015880663.1| (PREDICTED: N-acetyl-D-glucosamine kinase-like isoform X1 [Ziziphus jujuba]) HSP 1 Score: 532.7 bits (1371), Expect = 4.8e-148 Identity = 274/351 (78.06%), Postives = 299/351 (85.19%), Query Frame = 1
BLAST of Cp4.1LG06g05630.1 vs. NCBI nr
Match: gi|703136470|ref|XP_010106164.1| (hypothetical protein L484_012708 [Morus notabilis]) HSP 1 Score: 530.4 bits (1365), Expect = 2.4e-147 Identity = 271/346 (78.32%), Postives = 299/346 (86.42%), Query Frame = 1
BLAST of Cp4.1LG06g05630.1 vs. NCBI nr
Match: gi|359485331|ref|XP_002278295.2| (PREDICTED: N-acetyl-D-glucosamine kinase [Vitis vinifera]) HSP 1 Score: 530.4 bits (1365), Expect = 2.4e-147 Identity = 271/350 (77.43%), Postives = 301/350 (86.00%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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