Cp4.1LG06g04860.1 (mRNA) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG06g04860.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Fasciclin-like arabinogalactan protein
Location	Cp4.1LG06 : 2170674 .. 2171492 (+)
Sequence length	819

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCCAGAGCCATTTCCGCCGCCCTGCTTTTGAGTTTCCTCCTCTTCTCTGCAGCCTCCGCTTTCAATATCACTAATCTCCTAAGCCAGTTCCCCGATTTCAATGATTTGAACGATTTCCTCACACAAACAAATCTCGCCGGTGAAATTAACAGCCGTAAAACCATCACTATCCTCGCCCTCGACAACGGCGCCGTTTCTGGCCTATCTGGAAAGCCATTGGACGTCCTGAGAAGGATCTTGAGCGTTCATGTTATTCTCGATTACTACGATGCTCAGAAGCTTGCTAGATTGTCTACCGATAATACTACCGTTCTCACCACTCTGTTTCAAGCAAGCGGCGCTGCCAGGAATCAGCAAGGTTTCATCAAGGTTACGCAGATTAGCCATGGCGAGATCGCGTTCGGATCCGCCGTAAGAGGATCTCAGTTCGATTCGAGATTGGTGAAATCCGTCGTCGCACAGCCGTACAACATCTGTGTTCTTCAGATCTCATCTCCGATTCAGGTTCCTGGAATCGATGTCAAGCCACCTCGCTCCTCTCCATCATCACCACCACCGGCGTCGTTTTCTCCCGTCGGATCTCCTAAAAAGGCACCGGCTCCTTCCGCTAAGACTCCGTCAAAGGCTAGGGCTCCTCCCGCCAAAAAACCTAAGGTTGTTGCCGATTCGCCGGCAAGGTCTCCACCGAAGGCCGCCGACGGTGAGGATGATGCGGCTGCTCCAGCACCTAGCGAAAAATCCGGGGTCTCACGCGGTAGCTTCATCGGAGCTGCGGCTGTTATGGCTGTGATCTCGGTGTTTCTGGCTCTGTGA

mRNA sequence

ATGGATTCCAGAGCCATTTCCGCCGCCCTGCTTTTGAGTTTCCTCCTCTTCTCTGCAGCCTCCGCTTTCAATATCACTAATCTCCTAAGCCAGTTCCCCGATTTCAATGATTTGAACGATTTCCTCACACAAACAAATCTCGCCGGTGAAATTAACAGCCGTAAAACCATCACTATCCTCGCCCTCGACAACGGCGCCGTTTCTGGCCTATCTGGAAAGCCATTGGACGTCCTGAGAAGGATCTTGAGCGTTCATGTTATTCTCGATTACTACGATGCTCAGAAGCTTGCTAGATTGTCTACCGATAATACTACCGTTCTCACCACTCTGTTTCAAGCAAGCGGCGCTGCCAGGAATCAGCAAGGTTTCATCAAGGTTACGCAGATTAGCCATGGCGAGATCGCGTTCGGATCCGCCGTAAGAGGATCTCAGTTCGATTCGAGATTGGTGAAATCCGTCGTCGCACAGCCGTACAACATCTGTGTTCTTCAGATCTCATCTCCGATTCAGGTTCCTGGAATCGATGTCAAGCCACCTCGCTCCTCTCCATCATCACCACCACCGGCGTCGTTTTCTCCCGTCGGATCTCCTAAAAAGGCACCGGCTCCTTCCGCTAAGACTCCGTCAAAGGCTAGGGCTCCTCCCGCCAAAAAACCTAAGGTTGTTGCCGATTCGCCGGCAAGGTCTCCACCGAAGGCCGCCGACGGTGAGGATGATGCGGCTGCTCCAGCACCTAGCGAAAAATCCGGGGTCTCACGCGGTAGCTTCATCGGAGCTGCGGCTGTTATGGCTGTGATCTCGGTGTTTCTGGCTCTGTGA

Coding sequence (CDS)

ATGGATTCCAGAGCCATTTCCGCCGCCCTGCTTTTGAGTTTCCTCCTCTTCTCTGCAGCCTCCGCTTTCAATATCACTAATCTCCTAAGCCAGTTCCCCGATTTCAATGATTTGAACGATTTCCTCACACAAACAAATCTCGCCGGTGAAATTAACAGCCGTAAAACCATCACTATCCTCGCCCTCGACAACGGCGCCGTTTCTGGCCTATCTGGAAAGCCATTGGACGTCCTGAGAAGGATCTTGAGCGTTCATGTTATTCTCGATTACTACGATGCTCAGAAGCTTGCTAGATTGTCTACCGATAATACTACCGTTCTCACCACTCTGTTTCAAGCAAGCGGCGCTGCCAGGAATCAGCAAGGTTTCATCAAGGTTACGCAGATTAGCCATGGCGAGATCGCGTTCGGATCCGCCGTAAGAGGATCTCAGTTCGATTCGAGATTGGTGAAATCCGTCGTCGCACAGCCGTACAACATCTGTGTTCTTCAGATCTCATCTCCGATTCAGGTTCCTGGAATCGATGTCAAGCCACCTCGCTCCTCTCCATCATCACCACCACCGGCGTCGTTTTCTCCCGTCGGATCTCCTAAAAAGGCACCGGCTCCTTCCGCTAAGACTCCGTCAAAGGCTAGGGCTCCTCCCGCCAAAAAACCTAAGGTTGTTGCCGATTCGCCGGCAAGGTCTCCACCGAAGGCCGCCGACGGTGAGGATGATGCGGCTGCTCCAGCACCTAGCGAAAAATCCGGGGTCTCACGCGGTAGCTTCATCGGAGCTGCGGCTGTTATGGCTGTGATCTCGGTGTTTCTGGCTCTGTGA

Protein sequence

MDSRAISAALLLSFLLFSAASAFNITNLLSQFPDFNDLNDFLTQTNLAGEINSRKTITILALDNGAVSGLSGKPLDVLRRILSVHVILDYYDAQKLARLSTDNTTVLTTLFQASGAARNQQGFIKVTQISHGEIAFGSAVRGSQFDSRLVKSVVAQPYNICVLQISSPIQVPGIDVKPPRSSPSSPPPASFSPVGSPKKAPAPSAKTPSKARAPPAKKPKVVADSPARSPPKAADGEDDAAAPAPSEKSGVSRGSFIGAAAVMAVISVFLAL

Homology

[Close]

BLAST of Cp4.1LG06g04860.1 vs. Swiss-Prot
Match: FLA14_ARATH (Fasciclin-like arabinogalactan protein 14 OS=Arabidopsis thaliana GN=FLA14 PE=2 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.1e-38
Identity = 102/232 (43.97%), Postives = 146/232 (62.93%), Query Frame = 1


Query: 13  SFLLFSAASAFNITNLLSQFPDFNDLNDFLTQTNLAGEINSRKTITILALDNGAVSGLSG 72
           S  L++++++FNITN+L++  DF++ N  L++T LA  IN R+TIT+L + NGA+S LSG
Sbjct: 14  STFLYTSSNSFNITNILNEHDDFSNFNQLLSETQLASTINKRQTITVLVVSNGALSSLSG 73

Query: 73  KPLDVLRRILSVHVILDYYDAQKLARLSTDNTTVLTTLFQASGAARNQQGFIKVTQISHG 132
           +P  V+++ILS+H++LDYYD +KL  LS   T +LTTLFQ+SG AR QQGF+  T + +G
Sbjct: 74  QPTSVIKKILSLHIVLDYYDQKKLKNLS-KKTVLLTTLFQSSGLARGQQGFLNATVMKNG 133

Query: 133 EIAFGSAVRGSQFDSRLVKSVVAQPYNICVLQISSPIQVPGIDVKPPRSSPSSPPPASFS 192
           ++AFGSAV GS  D++L  +V A P+NI VL ISS I    IDVK   +  +SP     S
Sbjct: 134 DVAFGSAVPGSSLDAQLQDTVAALPFNISVLHISSAIM---IDVKGDNAPTASP----LS 193

Query: 193 PVGSPKKAPAPSAKTPSKARAPPAKKPKVVADSPARSPPKAADGEDDAAAPA 245
           PV SP +              PP+  P   AD P+ +   A     + + PA
Sbjct: 194 PVSSPPRPAESPNDDGQDFDEPPSSAPGAAADEPSENAGSANGVSRNDSQPA 237

[Close]

BLAST of Cp4.1LG06g04860.1 vs. Swiss-Prot
Match: FLA8_ARATH (Fasciclin-like arabinogalactan protein 8 OS=Arabidopsis thaliana GN=FLA8 PE=1 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 4.2e-35
Identity = 86/179 (48.04%), Postives = 117/179 (65.36%), Query Frame = 1


Query: 9   ALLLSFLLF-SAASAFNITNLLSQFPDFNDLNDFLTQTNLAGEINSRKTITILALDNGAV 68
           A   S L F S  S+ NIT +L+  PD++  N +L+QT LA EINSR TIT+L L+NGA+
Sbjct: 11  AFTFSLLAFASTVSSHNITQILADSPDYSSFNSYLSQTKLADEINSRTTITVLVLNNGAM 70

Query: 69  SGLSGK-PLDVLRRILSVHVILDYYDAQKLARLSTDNTTVLTTLFQASGAARNQQGFIKV 128
           S L+GK PL V++  LS+ V+LDYYD QKL ++S   TT+ TTL+Q +G A    GF+ +
Sbjct: 71  SALAGKHPLSVIKSALSLLVLLDYYDPQKLHKIS-KGTTLSTTLYQTTGNAPGNLGFVNI 130

Query: 129 TQISHGEIAFGSAVRGSQFDSRLVKSVVAQPYNICVLQISSPIQVPGIDVKPPRSSPSS 186
           T +  G++ FGSA  GS+ DS   KSV   PYNI +L+I +PI  PG+   P  S+  S
Sbjct: 131 TDLKGGKVGFGSAASGSKLDSSYTKSVKQIPYNISILEIDAPIIAPGVLTAPAPSASLS 188

[Close]

BLAST of Cp4.1LG06g04860.1 vs. Swiss-Prot
Match: FLA10_ARATH (Fasciclin-like arabinogalactan protein 10 OS=Arabidopsis thaliana GN=FLA10 PE=1 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 5.5e-35
Identity = 92/183 (50.27%), Postives = 121/183 (66.12%), Query Frame = 1


Query: 3   SRAISA-ALLLSFL-LFSAASAFNITNLLSQFPDFNDLNDFLTQTNLAGEINSRKTITIL 62
           SRA +  A  LS L + S  S  NIT +LS  P+++  N++L+QT LA EINSR TIT+L
Sbjct: 4   SRAFTLFAFTLSLLTVASTVSGHNITQILSDTPEYSSFNNYLSQTKLADEINSRTTITVL 63

Query: 63  ALDNGAVSGLSGK-PLDVLRRILSVHVILDYYDAQKLARLSTDNTTVLTTLFQASGAARN 122
            L+NGA+S L+GK PL V++  LS+ V+LDYYD  KL +LS   TT+ TTL+Q +G A  
Sbjct: 64  VLNNGAMSSLAGKHPLSVVKNALSLLVLLDYYDPLKLHQLS-KGTTLTTTLYQTTGHALG 123

Query: 123 QQGFIKVTQISHGEIAFGSAVRGSQFDSRLVKSVVAQPYNICVLQISSPIQVPGIDVKPP 182
             GF+ VT +  G++ FGSA  GS+ DS   KSV   PYNI VL+I++PI  PGI   P 
Sbjct: 124 NLGFVNVTDLKGGKVGFGSAAPGSKLDSSYTKSVKQIPYNISVLEINAPIIAPGILTAPA 183

[Close]

BLAST of Cp4.1LG06g04860.1 vs. Swiss-Prot
Match: FLA3_ARATH (Fasciclin-like arabinogalactan protein 3 OS=Arabidopsis thaliana GN=FLA3 PE=2 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 2.0e-32
Identity = 108/281 (38.43%), Postives = 160/281 (56.94%), Query Frame = 1


Query: 1   MDSRAISAALLLSFLLF--SAASAFNITNLLSQFPDFNDLNDFLTQTNLAGEINSRKTIT 60
           M  +  S+ L L+ LL   S  SA NIT +L ++P+F+ + + L +T L   IN R+TIT
Sbjct: 1   MGLKVSSSLLCLTILLAVSSIVSAVNITRVLEKYPEFSTMTELLAKTELTPIINKRQTIT 60

Query: 61  ILALDNGAVSGLSGKPLDVLRRILSVHVILDYYDAQKLARLSTDNTTVLTTLFQASGAAR 120
           +LAL+N A+  +SG+P + ++ IL  HV+LDY+D  KL  L  + +T+LTTL+Q++G  +
Sbjct: 61  VLALNNDAIGSISGRPEEEVKNILMNHVVLDYFDELKLKALK-EKSTLLTTLYQSTGLGQ 120

Query: 121 NQQGFIKVTQISHGEIAFGSAVRGSQFDSRLVKSVVAQPYNICVLQISSPIQVPGI--DV 180
            Q GF+  T+ S+G+I FGS V+G+   +  + +V   PYN+ V+QIS PI  PG+   V
Sbjct: 121 QQNGFLNCTK-SNGKIYFGSGVKGAPQTAEYITTVFRNPYNLSVVQISMPIVAPGLGSPV 180

Query: 181 KPPRSSPSSPPPASFSPVGSPKKAPAPSAKTPSKARAPPAKKPKVV-------ADSPARS 240
           K P   P S PPA     G+   APAP A     A APP   P+         +DSPA +
Sbjct: 181 KVPPPPPMSSPPAPSPKKGAATPAPAP-ADEGDYADAPPGLAPETAPASAPSESDSPAPA 240

Query: 241 PPKAADGEDDAAAPAPSEKSGVSRGSFIGAAAVMAVISVFL 271
           P K+   +  AA  A    S  + G   GA  V+  ++ F+
Sbjct: 241 PDKSGKKKMAAADEAEPPSSASNTGLSFGAVLVLGFVASFV 278

[Close]

BLAST of Cp4.1LG06g04860.1 vs. Swiss-Prot
Match: FLA2_ARATH (Fasciclin-like arabinogalactan protein 2 OS=Arabidopsis thaliana GN=FLA2 PE=1 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.7e-28
Identity = 78/186 (41.94%), Postives = 120/186 (64.52%), Query Frame = 1


Query: 4   RAISAALLLSF---LLFSAASAFNITNLLSQFPDFNDLNDFLTQTNLAGEINSRKTITIL 63
           R  + AL+L F   L  S ++A NIT +L++ PDF+  N +L+ T+LA EIN R+TIT+L
Sbjct: 5   RRAATALVLIFQLHLFLSLSNAHNITRILAKDPDFSTFNHYLSATHLADEINRRQTITVL 64

Query: 64  ALDNGAVSGL--SGKPLDVLRRILSVHVILDYYDAQKLARLSTDNTTVLTTLFQASGAAR 123
           A+DN A+S +  +G  L  +R ILS+HV++DY+  +KL ++ TD +T   ++FQ++G+A 
Sbjct: 65  AVDNSAMSSILSNGYSLYQIRNILSLHVLVDYFGTKKLHQI-TDGSTSTASMFQSTGSAT 124

Query: 124 NQQGFIKVTQISHGEIAFGSAVRGSQFDSRLVKSVVAQPYNICVLQISSPIQVPGIDVKP 183
              G+I +T I  G++AFG     S+  +  VKSV  +PYNI VL IS  +  P  + + 
Sbjct: 125 GTSGYINITDIKGGKVAFGVQDDDSKLTAHYVKSVFEKPYNISVLHISQVLTSP--EAEA 184

Query: 184 PRSSPS 185
           P +SPS
Sbjct: 185 PTASPS 187

[Close]

BLAST of Cp4.1LG06g04860.1 vs. TrEMBL
Match: A0A0A0LJF2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G881690 PE=4 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 3.4e-84
Identity = 191/282 (67.73%), Postives = 226/282 (80.14%), Query Frame = 1


Query: 1   MDSRAISAALLLSFLLFSAASAFNITNLLSQFPDFNDLNDFLTQTNLAGEINSRKTITIL 60
           MDSRAISAALL +FLLFSAASAFNIT LLSQFPDF + ND LTQT LA +INSRKTITIL
Sbjct: 1   MDSRAISAALLFNFLLFSAASAFNITKLLSQFPDFTNFNDLLTQTKLADDINSRKTITIL 60

Query: 61  ALDNGAVSGLSGKPLDVLRRILSVHVILDYYDAQKLARLSTDNTTVLTTLFQASGAARNQ 120
           A+DNGA+SG+SGKPLDV++RILSVHVILDYYD QKL +LS+DNTTVLTTL+Q SG A N+
Sbjct: 61  AVDNGAISGISGKPLDVMKRILSVHVILDYYDVQKLGKLSSDNTTVLTTLYQTSGTATNE 120

Query: 121 QGFIKVTQISHGEIAFGSAVRGSQFDSRLVKSVVAQPYNICVLQISSPIQVPGIDVKPPR 180
           QGF+KVT I+ GE+AF SAV+G+  DS+LVKSVV+QPYNI VLQI+SPIQVPGID KP  
Sbjct: 121 QGFLKVTLINEGEVAFKSAVKGATADSKLVKSVVSQPYNIVVLQITSPIQVPGIDTKPTN 180

Query: 181 SSPSSPPPASFSPVGSPKKAPAPSAKTPSKARAPPAKKPKVVADSP-ARSPPK------- 240
           S+ + PP  S SP GSPK+AP PSA+TPS+A AP A+ PK  +D+P + SPPK       
Sbjct: 181 STTAPPPSKSSSPAGSPKEAPVPSAETPSEADAPAAESPK--SDAPVSSSPPKPEADSPD 240

Query: 241 AADGEDDAAAPAPSEKSGVSRGSFI--GAAAVMAVISVFLAL 273
           AA  + DAAAP PS+ S  S G  +  GAA V+AV+S FLA+
Sbjct: 241 AAGDDADAAAPGPSDSSSSSSGVRLVGGAAVVVAVLSSFLAM 280

[Close]

BLAST of Cp4.1LG06g04860.1 vs. TrEMBL
Match: A0A059CR55_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C02101 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 8.3e-54
Identity = 146/290 (50.34%), Postives = 186/290 (64.14%), Query Frame = 1


Query: 1   MDSRAISAALLLSFLLF-SAASAFNITNLLSQFPDFNDLNDFLTQTNLAGEINSRKTITI 60
           M+S+A +      F+   SAASAFNIT LLS++PDF+  NDFLTQT L  +IN R+TIT+
Sbjct: 1   MNSKAFACLFFAVFIFSSSAASAFNITKLLSRYPDFSTFNDFLTQTKLYEQINRRQTITV 60

Query: 61  LALDNGAVSGLSGKPLDVLRRILSVHVILDYYDAQKLARLSTDNTTVLTTLFQASGAARN 120
           LALDN AV  +SGKP DVL+ ILS HV+LDYYD +KL  LS   +T+LTTL+Q+SG A+N
Sbjct: 61  LALDNSAVGDISGKPADVLKSILSAHVVLDYYDIEKLTDLS-KKSTLLTTLYQSSGTAQN 120

Query: 121 QQGFIKVTQISHGEIAFGSAVRGSQFDSRLVKSVVAQPYNICVLQISSPIQVPGIDVKPP 180
           QQGF+ VT+ S GEI FGSAV+G+  +++LVK+V AQPYNI VLQ+SSPI  PGID   P
Sbjct: 121 QQGFLNVTKQS-GEIVFGSAVKGASHNAKLVKAVAAQPYNISVLQVSSPIIAPGIDASNP 180

Query: 181 RSSPSSPPPASFSPVGSPKKAPA------PSAKTPSKARAPPAKKPKVV----------- 240
             +  +    S SP  +PKKAPA      P A TP  + AP A  P              
Sbjct: 181 NGTVHNATTPSASPAATPKKAPASSPAKSPVADTPDSSEAPAADSPADAPEADAPEASAP 240

Query: 241 -ADSPARSPPKAADGEDDAAAPAPSEKSGVSRGSFIGAAAVMAVISVFLA 272
            AD+P  SPP  +D + DA AP  S  S V+    +GA  VM ++S  +A
Sbjct: 241 EADAPTSSPPAPSDADADAPAPGKSSSSRVTLP--VGAGIVMGLLSAMVA 286

[Close]

BLAST of Cp4.1LG06g04860.1 vs. TrEMBL
Match: A0A0A0LM43_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G379090 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 1.5e-47
Identity = 128/273 (46.89%), Postives = 176/273 (64.47%), Query Frame = 1


Query: 14  FLLFSAASAFNITNLLSQFPDFNDLNDFLTQTNLAGEINSRKTITILALDNGAVSGLSGK 73
           F   S+ SAFNIT LL++FPDF   N+ LT+T+L  +INSR+TIT+LAL N  V  ++G 
Sbjct: 25  FFSTSSVSAFNITRLLNRFPDFGAFNELLTKTHLYEQINSRQTITVLALSNATVGAIAGN 84

Query: 74  PLDVLRRILSVHVILDYYDAQKLARLSTDNTTVLTTLFQASGAARNQQGFIKVTQISHGE 133
            LDV+++ILS HVILDYYD +K+ +LSTD  TVLTT+FQ++G A NQQGF+KV     GE
Sbjct: 85  SLDVIKQILSAHVILDYYDVEKMRKLSTDKATVLTTMFQSTGDAENQQGFLKVVLNKRGE 144

Query: 134 IAFGSAVRGSQFDSRLVKSVVAQPYNICVLQISSPIQVPGIDVKPPRSSPSSPPPASFSP 193
           + FGSA + +   ++L+K+V +QPYNI +LQ+S+PI +PGI V       + PPPA  +P
Sbjct: 145 VEFGSAAKKAPLSAKLMKTVASQPYNISLLQVSAPIVIPGIGVY------NLPPPAPEAP 204

Query: 194 VGSPKKAPAPS-------------AKTPSKARAPPAKKPKVVA---DSPARSPPKAADGE 253
             +P +APAP+             A +PS A +P ++ P   A   D+P  SPPK +D E
Sbjct: 205 FVAPVEAPAPAPEADAPGPAEDDDADSPSDAPSPASEAPAPAADAPDAPVSSPPKESDLE 264

Query: 254 DDAAAPAPSE------KSGVSRGSFIGAAAVMA 265
            DA AP PS+       S  +R  F GA A++A
Sbjct: 265 -DADAPGPSDDASDDSTSEGTRRKFGGAGAMVA 290

[Close]

BLAST of Cp4.1LG06g04860.1 vs. TrEMBL
Match: B9N6A9_POPTR (Putative surface family protein OS=Populus trichocarpa GN=POPTR_0006s29110g PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 4.4e-47
Identity = 122/248 (49.19%), Postives = 168/248 (67.74%), Query Frame = 1


Query: 1   MDSRAISAALLLSFLLFSAASAFNITNLLSQFPDFNDLNDFLTQTNLAGEINSRKTITIL 60
           MDS+A S   +    L S ++AFN T +L+Q+P+F + ND L+Q+ LA E+NSR+TIT+L
Sbjct: 1   MDSKASSLLFIAFLCLISTSTAFNSTKILAQYPEFANFNDLLSQSGLAQEMNSRQTITVL 60

Query: 61  ALDNGAVSGLSGKPLDVLRRILSVHVILDYYDAQKLARLSTDNTTVLTTLFQASGAARNQ 120
            LDNG++ GLSG+PLD+ +RILS HVILDYYD  KL++L    +T++TTL+QASG A N+
Sbjct: 61  VLDNGSIDGLSGRPLDIAKRILSAHVILDYYDQIKLSKLQ-KASTIVTTLYQASGVADNR 120

Query: 121 QGFIKVTQISHGEIAFGSAVRGSQFDSRLVKSVVAQPYNICVLQISSPIQVPGIDVKPPR 180
           QGF+ +++ + G I FGSA++G+   + LVKS+ +QPYNI VLQ+S PI+ PGI+   P 
Sbjct: 121 QGFLNISRTAEG-IKFGSAMKGAPLVASLVKSIYSQPYNISVLQVSEPIETPGIENMAP- 180

Query: 181 SSPSSPPPASFSPVGSPKKAPAPSAKTPSKARAPPAKKPKVVADSPARSPPKAADGEDDA 240
                PPP   + V  PKKAPAP+  T +   APP    K  A SPA+SP K        
Sbjct: 181 -----PPPPGTAAV--PKKAPAPAPSTKTPPAAPPT--AKTPAKSPAKSPSK-------- 227

Query: 241 AAPAPSEK 249
            APAPS++
Sbjct: 241 -APAPSKE 227

[Close]

BLAST of Cp4.1LG06g04860.1 vs. TrEMBL
Match: U5FFK2_POPTR (Putative surface family protein OS=Populus trichocarpa GN=POPTR_0018s03790g PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 1.7e-46
Identity = 132/281 (46.98%), Postives = 178/281 (63.35%), Query Frame = 1


Query: 1   MDSRAISAALLLSFLLFSAAS-AFNITNLLSQFPDFNDLNDFLTQTNLAGEINSRKTITI 60
           MDS+  S   +    L S+ S AFNIT +L+Q+P+F   ND LTQ+ LA E++SR+TIT+
Sbjct: 1   MDSKVSSLLFIAILCLISSTSTAFNITKILAQYPEFVSFNDLLTQSGLAKEMSSRETITV 60

Query: 61  LALDNGAVSGLSGKPLDVLRRILSVHVILDYYDAQKLARLSTDNTTVLTTLFQASGAARN 120
           LALDN ++ GLSG+PLD+ +RILS HVILDYYD  KL++L    +T++TTL+QASGAA +
Sbjct: 61  LALDNSSIGGLSGRPLDIAKRILSAHVILDYYDQIKLSKLK-KASTIVTTLYQASGAADD 120

Query: 121 QQGFIKVTQISHGEIAFGSAVRGSQFDSRLVKSVVAQPYNICVLQISSPIQVPGIDVKPP 180
           +QGF+ +++ + G I FGSAV+G+   + LVK V AQPYNI VLQ+S PI+ PGI+   P
Sbjct: 121 RQGFLNISRTAEG-IKFGSAVKGAPLVASLVKPVYAQPYNISVLQVSEPIEAPGIENMAP 180

Query: 181 RSSPSSPPPASFSPVGSPKKAPAPSAKTPSKARAPPAKKPKVVADSPARSPPKAADG--- 240
                 PPP    P   PKKAPAP+AK+PSKA AP   +P    +SP    P AADG   
Sbjct: 181 ------PPP----PAAVPKKAPAPTAKSPSKAPAPSKVEPSTPTESPTEG-PVAADGPVA 240

Query: 241 -----EDDAAAPAPSEKSGVSRGSFIGAAAVMAVISVFLAL 273
                   A AP   E +  +  S + A   + VI +   +
Sbjct: 241 DVPTASPLADAPTADETTAEAASSQMHAGGAVVVIGLLACM 268

[Close]

BLAST of Cp4.1LG06g04860.1 vs. TAIR10
Match: AT3G12660.1 (AT3G12660.1 FASCICLIN-like arabinogalactan protein 14 precursor)

HSP 1 Score: 161.8 bits (408), Expect = 6.1e-40
Identity = 102/232 (43.97%), Postives = 146/232 (62.93%), Query Frame = 1


Query: 13  SFLLFSAASAFNITNLLSQFPDFNDLNDFLTQTNLAGEINSRKTITILALDNGAVSGLSG 72
           S  L++++++FNITN+L++  DF++ N  L++T LA  IN R+TIT+L + NGA+S LSG
Sbjct: 14  STFLYTSSNSFNITNILNEHDDFSNFNQLLSETQLASTINKRQTITVLVVSNGALSSLSG 73

Query: 73  KPLDVLRRILSVHVILDYYDAQKLARLSTDNTTVLTTLFQASGAARNQQGFIKVTQISHG 132
           +P  V+++ILS+H++LDYYD +KL  LS   T +LTTLFQ+SG AR QQGF+  T + +G
Sbjct: 74  QPTSVIKKILSLHIVLDYYDQKKLKNLS-KKTVLLTTLFQSSGLARGQQGFLNATVMKNG 133

Query: 133 EIAFGSAVRGSQFDSRLVKSVVAQPYNICVLQISSPIQVPGIDVKPPRSSPSSPPPASFS 192
           ++AFGSAV GS  D++L  +V A P+NI VL ISS I    IDVK   +  +SP     S
Sbjct: 134 DVAFGSAVPGSSLDAQLQDTVAALPFNISVLHISSAIM---IDVKGDNAPTASP----LS 193

Query: 193 PVGSPKKAPAPSAKTPSKARAPPAKKPKVVADSPARSPPKAADGEDDAAAPA 245
           PV SP +              PP+  P   AD P+ +   A     + + PA
Sbjct: 194 PVSSPPRPAESPNDDGQDFDEPPSSAPGAAADEPSENAGSANGVSRNDSQPA 237

[Close]

BLAST of Cp4.1LG06g04860.1 vs. TAIR10
Match: AT2G45470.1 (AT2G45470.1 FASCICLIN-like arabinogalactan protein 8)

HSP 1 Score: 149.8 bits (377), Expect = 2.4e-36
Identity = 86/179 (48.04%), Postives = 117/179 (65.36%), Query Frame = 1


Query: 9   ALLLSFLLF-SAASAFNITNLLSQFPDFNDLNDFLTQTNLAGEINSRKTITILALDNGAV 68
           A   S L F S  S+ NIT +L+  PD++  N +L+QT LA EINSR TIT+L L+NGA+
Sbjct: 11  AFTFSLLAFASTVSSHNITQILADSPDYSSFNSYLSQTKLADEINSRTTITVLVLNNGAM 70

Query: 69  SGLSGK-PLDVLRRILSVHVILDYYDAQKLARLSTDNTTVLTTLFQASGAARNQQGFIKV 128
           S L+GK PL V++  LS+ V+LDYYD QKL ++S   TT+ TTL+Q +G A    GF+ +
Sbjct: 71  SALAGKHPLSVIKSALSLLVLLDYYDPQKLHKIS-KGTTLSTTLYQTTGNAPGNLGFVNI 130

Query: 129 TQISHGEIAFGSAVRGSQFDSRLVKSVVAQPYNICVLQISSPIQVPGIDVKPPRSSPSS 186
           T +  G++ FGSA  GS+ DS   KSV   PYNI +L+I +PI  PG+   P  S+  S
Sbjct: 131 TDLKGGKVGFGSAASGSKLDSSYTKSVKQIPYNISILEIDAPIIAPGVLTAPAPSASLS 188

[Close]

BLAST of Cp4.1LG06g04860.1 vs. TAIR10
Match: AT3G60900.1 (AT3G60900.1 FASCICLIN-like arabinogalactan-protein 10)

HSP 1 Score: 149.4 bits (376), Expect = 3.1e-36
Identity = 92/183 (50.27%), Postives = 121/183 (66.12%), Query Frame = 1


Query: 3   SRAISA-ALLLSFL-LFSAASAFNITNLLSQFPDFNDLNDFLTQTNLAGEINSRKTITIL 62
           SRA +  A  LS L + S  S  NIT +LS  P+++  N++L+QT LA EINSR TIT+L
Sbjct: 4   SRAFTLFAFTLSLLTVASTVSGHNITQILSDTPEYSSFNNYLSQTKLADEINSRTTITVL 63

Query: 63  ALDNGAVSGLSGK-PLDVLRRILSVHVILDYYDAQKLARLSTDNTTVLTTLFQASGAARN 122
            L+NGA+S L+GK PL V++  LS+ V+LDYYD  KL +LS   TT+ TTL+Q +G A  
Sbjct: 64  VLNNGAMSSLAGKHPLSVVKNALSLLVLLDYYDPLKLHQLS-KGTTLTTTLYQTTGHALG 123

Query: 123 QQGFIKVTQISHGEIAFGSAVRGSQFDSRLVKSVVAQPYNICVLQISSPIQVPGIDVKPP 182
             GF+ VT +  G++ FGSA  GS+ DS   KSV   PYNI VL+I++PI  PGI   P 
Sbjct: 124 NLGFVNVTDLKGGKVGFGSAAPGSKLDSSYTKSVKQIPYNISVLEINAPIIAPGILTAPA 183

[Close]

BLAST of Cp4.1LG06g04860.1 vs. TAIR10
Match: AT2G24450.1 (AT2G24450.1 FASCICLIN-like arabinogalactan protein 3 precursor)

HSP 1 Score: 141.0 bits (354), Expect = 1.1e-33
Identity = 108/281 (38.43%), Postives = 160/281 (56.94%), Query Frame = 1


Query: 1   MDSRAISAALLLSFLLF--SAASAFNITNLLSQFPDFNDLNDFLTQTNLAGEINSRKTIT 60
           M  +  S+ L L+ LL   S  SA NIT +L ++P+F+ + + L +T L   IN R+TIT
Sbjct: 1   MGLKVSSSLLCLTILLAVSSIVSAVNITRVLEKYPEFSTMTELLAKTELTPIINKRQTIT 60

Query: 61  ILALDNGAVSGLSGKPLDVLRRILSVHVILDYYDAQKLARLSTDNTTVLTTLFQASGAAR 120
           +LAL+N A+  +SG+P + ++ IL  HV+LDY+D  KL  L  + +T+LTTL+Q++G  +
Sbjct: 61  VLALNNDAIGSISGRPEEEVKNILMNHVVLDYFDELKLKALK-EKSTLLTTLYQSTGLGQ 120

Query: 121 NQQGFIKVTQISHGEIAFGSAVRGSQFDSRLVKSVVAQPYNICVLQISSPIQVPGI--DV 180
            Q GF+  T+ S+G+I FGS V+G+   +  + +V   PYN+ V+QIS PI  PG+   V
Sbjct: 121 QQNGFLNCTK-SNGKIYFGSGVKGAPQTAEYITTVFRNPYNLSVVQISMPIVAPGLGSPV 180

Query: 181 KPPRSSPSSPPPASFSPVGSPKKAPAPSAKTPSKARAPPAKKPKVV-------ADSPARS 240
           K P   P S PPA     G+   APAP A     A APP   P+         +DSPA +
Sbjct: 181 KVPPPPPMSSPPAPSPKKGAATPAPAP-ADEGDYADAPPGLAPETAPASAPSESDSPAPA 240

Query: 241 PPKAADGEDDAAAPAPSEKSGVSRGSFIGAAAVMAVISVFL 271
           P K+   +  AA  A    S  + G   GA  V+  ++ F+
Sbjct: 241 PDKSGKKKMAAADEAEPPSSASNTGLSFGAVLVLGFVASFV 278

[Close]

BLAST of Cp4.1LG06g04860.1 vs. TAIR10
Match: AT4G12730.1 (AT4G12730.1 FASCICLIN-like arabinogalactan 2)

HSP 1 Score: 127.9 bits (320), Expect = 9.7e-30
Identity = 78/186 (41.94%), Postives = 120/186 (64.52%), Query Frame = 1


Query: 4   RAISAALLLSF---LLFSAASAFNITNLLSQFPDFNDLNDFLTQTNLAGEINSRKTITIL 63
           R  + AL+L F   L  S ++A NIT +L++ PDF+  N +L+ T+LA EIN R+TIT+L
Sbjct: 5   RRAATALVLIFQLHLFLSLSNAHNITRILAKDPDFSTFNHYLSATHLADEINRRQTITVL 64

Query: 64  ALDNGAVSGL--SGKPLDVLRRILSVHVILDYYDAQKLARLSTDNTTVLTTLFQASGAAR 123
           A+DN A+S +  +G  L  +R ILS+HV++DY+  +KL ++ TD +T   ++FQ++G+A 
Sbjct: 65  AVDNSAMSSILSNGYSLYQIRNILSLHVLVDYFGTKKLHQI-TDGSTSTASMFQSTGSAT 124

Query: 124 NQQGFIKVTQISHGEIAFGSAVRGSQFDSRLVKSVVAQPYNICVLQISSPIQVPGIDVKP 183
              G+I +T I  G++AFG     S+  +  VKSV  +PYNI VL IS  +  P  + + 
Sbjct: 125 GTSGYINITDIKGGKVAFGVQDDDSKLTAHYVKSVFEKPYNISVLHISQVLTSP--EAEA 184

Query: 184 PRSSPS 185
           P +SPS
Sbjct: 185 PTASPS 187

[Close]

BLAST of Cp4.1LG06g04860.1 vs. NCBI nr
Match: gi|449437354|ref|XP_004136457.1| (PREDICTED: fasciclin-like arabinogalactan protein 14 [Cucumis sativus])

HSP 1 Score: 319.7 bits (818), Expect = 4.9e-84
Identity = 191/282 (67.73%), Postives = 226/282 (80.14%), Query Frame = 1


Query: 1   MDSRAISAALLLSFLLFSAASAFNITNLLSQFPDFNDLNDFLTQTNLAGEINSRKTITIL 60
           MDSRAISAALL +FLLFSAASAFNIT LLSQFPDF + ND LTQT LA +INSRKTITIL
Sbjct: 1   MDSRAISAALLFNFLLFSAASAFNITKLLSQFPDFTNFNDLLTQTKLADDINSRKTITIL 60

Query: 61  ALDNGAVSGLSGKPLDVLRRILSVHVILDYYDAQKLARLSTDNTTVLTTLFQASGAARNQ 120
           A+DNGA+SG+SGKPLDV++RILSVHVILDYYD QKL +LS+DNTTVLTTL+Q SG A N+
Sbjct: 61  AVDNGAISGISGKPLDVMKRILSVHVILDYYDVQKLGKLSSDNTTVLTTLYQTSGTATNE 120

Query: 121 QGFIKVTQISHGEIAFGSAVRGSQFDSRLVKSVVAQPYNICVLQISSPIQVPGIDVKPPR 180
           QGF+KVT I+ GE+AF SAV+G+  DS+LVKSVV+QPYNI VLQI+SPIQVPGID KP  
Sbjct: 121 QGFLKVTLINEGEVAFKSAVKGATADSKLVKSVVSQPYNIVVLQITSPIQVPGIDTKPTN 180

Query: 181 SSPSSPPPASFSPVGSPKKAPAPSAKTPSKARAPPAKKPKVVADSP-ARSPPK------- 240
           S+ + PP  S SP GSPK+AP PSA+TPS+A AP A+ PK  +D+P + SPPK       
Sbjct: 181 STTAPPPSKSSSPAGSPKEAPVPSAETPSEADAPAAESPK--SDAPVSSSPPKPEADSPD 240

Query: 241 AADGEDDAAAPAPSEKSGVSRGSFI--GAAAVMAVISVFLAL 273
           AA  + DAAAP PS+ S  S G  +  GAA V+AV+S FLA+
Sbjct: 241 AAGDDADAAAPGPSDSSSSSSGVRLVGGAAVVVAVLSSFLAM 280

[Close]

BLAST of Cp4.1LG06g04860.1 vs. NCBI nr
Match: gi|659132683|ref|XP_008466329.1| (PREDICTED: fasciclin-like arabinogalactan protein 14 [Cucumis melo])

HSP 1 Score: 318.2 bits (814), Expect = 1.4e-83
Identity = 188/280 (67.14%), Postives = 221/280 (78.93%), Query Frame = 1


Query: 1   MDSRAISAALLLSFLLFSAASAFNITNLLSQFPDFNDLNDFLTQTNLAGEINSRKTITIL 60
           MDSRAISAALL +FLLFSAASAFNIT LLSQFPDF + ND LTQT LA +IN+RKTITIL
Sbjct: 1   MDSRAISAALLFNFLLFSAASAFNITKLLSQFPDFTNFNDLLTQTKLADDINNRKTITIL 60

Query: 61  ALDNGAVSGLSGKPLDVLRRILSVHVILDYYDAQKLARLSTDNTTVLTTLFQASGAARNQ 120
           A+DNGA+SG+SGKPLDV++RILSVHVILDYYD QKL +LS+DNTTVLTTL+Q SGAA NQ
Sbjct: 61  AVDNGAISGISGKPLDVMKRILSVHVILDYYDVQKLGKLSSDNTTVLTTLYQTSGAATNQ 120

Query: 121 QGFIKVTQISHGEIAFGSAVRGSQFDSRLVKSVVAQPYNICVLQISSPIQVPGIDVKPPR 180
           QGF+KVT I+ GE+AF SAV+G+  DS+LVKSV +QPYNI VLQI+SPIQVPGID KP  
Sbjct: 121 QGFLKVTLINEGEVAFESAVKGATADSKLVKSVASQPYNISVLQITSPIQVPGIDAKPTN 180

Query: 181 SSPSSPPPASFSPVGSPKKAPAPSAKTPSKARAPPAKKPKVVADSPARSPPK-------A 240
           S+ + PP  S SP GSPK+AP PSA+TP       AK PK  +D+P  SPPK       A
Sbjct: 181 STTAPPPSKSSSPAGSPKEAPVPSAETPVAKSPKAAKSPK--SDAPVSSPPKPEADSPDA 240

Query: 241 ADGEDDAAAPAPSEKSGVSRGSFI-GAAAVMAVISVFLAL 273
           A G+ DA+AP PS+ S  S G  + GAA V+AV+S FLA+
Sbjct: 241 AGGDADASAPGPSDSSPSSGGRLMGGAAVVVAVVSSFLAM 278

[Close]

BLAST of Cp4.1LG06g04860.1 vs. NCBI nr
Match: gi|629116029|gb|KCW80704.1| (hypothetical protein EUGRSUZ_C02101 [Eucalyptus grandis])

HSP 1 Score: 218.8 bits (556), Expect = 1.2e-53
Identity = 146/290 (50.34%), Postives = 186/290 (64.14%), Query Frame = 1


Query: 1   MDSRAISAALLLSFLLF-SAASAFNITNLLSQFPDFNDLNDFLTQTNLAGEINSRKTITI 60
           M+S+A +      F+   SAASAFNIT LLS++PDF+  NDFLTQT L  +IN R+TIT+
Sbjct: 1   MNSKAFACLFFAVFIFSSSAASAFNITKLLSRYPDFSTFNDFLTQTKLYEQINRRQTITV 60

Query: 61  LALDNGAVSGLSGKPLDVLRRILSVHVILDYYDAQKLARLSTDNTTVLTTLFQASGAARN 120
           LALDN AV  +SGKP DVL+ ILS HV+LDYYD +KL  LS   +T+LTTL+Q+SG A+N
Sbjct: 61  LALDNSAVGDISGKPADVLKSILSAHVVLDYYDIEKLTDLS-KKSTLLTTLYQSSGTAQN 120

Query: 121 QQGFIKVTQISHGEIAFGSAVRGSQFDSRLVKSVVAQPYNICVLQISSPIQVPGIDVKPP 180
           QQGF+ VT+ S GEI FGSAV+G+  +++LVK+V AQPYNI VLQ+SSPI  PGID   P
Sbjct: 121 QQGFLNVTKQS-GEIVFGSAVKGASHNAKLVKAVAAQPYNISVLQVSSPIIAPGIDASNP 180

Query: 181 RSSPSSPPPASFSPVGSPKKAPA------PSAKTPSKARAPPAKKPKVV----------- 240
             +  +    S SP  +PKKAPA      P A TP  + AP A  P              
Sbjct: 181 NGTVHNATTPSASPAATPKKAPASSPAKSPVADTPDSSEAPAADSPADAPEADAPEASAP 240

Query: 241 -ADSPARSPPKAADGEDDAAAPAPSEKSGVSRGSFIGAAAVMAVISVFLA 272
            AD+P  SPP  +D + DA AP  S  S V+    +GA  VM ++S  +A
Sbjct: 241 EADAPTSSPPAPSDADADAPAPGKSSSSRVTLP--VGAGIVMGLLSAMVA 286

[Close]

BLAST of Cp4.1LG06g04860.1 vs. NCBI nr
Match: gi|702298247|ref|XP_010048457.1| (PREDICTED: fasciclin-like arabinogalactan protein 3 [Eucalyptus grandis])

HSP 1 Score: 218.8 bits (556), Expect = 1.2e-53
Identity = 146/290 (50.34%), Postives = 186/290 (64.14%), Query Frame = 1


Query: 1   MDSRAISAALLLSFLLF-SAASAFNITNLLSQFPDFNDLNDFLTQTNLAGEINSRKTITI 60
           M+S+A +      F+   SAASAFNIT LLS++PDF+  NDFLTQT L  +IN R+TIT+
Sbjct: 60  MNSKAFACLFFAVFIFSSSAASAFNITKLLSRYPDFSTFNDFLTQTKLYEQINRRQTITV 119

Query: 61  LALDNGAVSGLSGKPLDVLRRILSVHVILDYYDAQKLARLSTDNTTVLTTLFQASGAARN 120
           LALDN AV  +SGKP DVL+ ILS HV+LDYYD +KL  LS   +T+LTTL+Q+SG A+N
Sbjct: 120 LALDNSAVGDISGKPADVLKSILSAHVVLDYYDIEKLTDLS-KKSTLLTTLYQSSGTAQN 179

Query: 121 QQGFIKVTQISHGEIAFGSAVRGSQFDSRLVKSVVAQPYNICVLQISSPIQVPGIDVKPP 180
           QQGF+ VT+ S GEI FGSAV+G+  +++LVK+V AQPYNI VLQ+SSPI  PGID   P
Sbjct: 180 QQGFLNVTKQS-GEIVFGSAVKGASHNAKLVKAVAAQPYNISVLQVSSPIIAPGIDASNP 239

Query: 181 RSSPSSPPPASFSPVGSPKKAPA------PSAKTPSKARAPPAKKPKVV----------- 240
             +  +    S SP  +PKKAPA      P A TP  + AP A  P              
Sbjct: 240 NGTVHNATTPSASPAATPKKAPASSPAKSPVADTPDSSEAPAADSPADAPEADAPEASAP 299

Query: 241 -ADSPARSPPKAADGEDDAAAPAPSEKSGVSRGSFIGAAAVMAVISVFLA 272
            AD+P  SPP  +D + DA AP  S  S V+    +GA  VM ++S  +A
Sbjct: 300 EADAPTSSPPAPSDADADAPAPGKSSSSRVTLP--VGAGIVMGLLSAMVA 345

[Close]

BLAST of Cp4.1LG06g04860.1 vs. NCBI nr
Match: gi|1009136043|ref|XP_015885320.1| (PREDICTED: fasciclin-like arabinogalactan protein 14 [Ziziphus jujuba])

HSP 1 Score: 216.1 bits (549), Expect = 7.7e-53
Identity = 154/307 (50.16%), Postives = 199/307 (64.82%), Query Frame = 1


Query: 1   MDSRAISA-ALLLSFLLF-SAASAFNITNLLSQFPDFNDLNDFLTQTNLAGEINSRKTIT 60
           MD +A S  +L + FLLF S+A+AFNIT LL  FP+F++LN  L Q  L  EINSR+TIT
Sbjct: 1   MDHKASSLLSLAVFFLLFISSATAFNITKLLGTFPEFSNLNSLLLQNKLNDEINSRRTIT 60

Query: 61  ILALDNGAVSGLSGKPLDVLRRILSVHVILDYYDAQKLARLSTDN-TTVLTTLFQASGAA 120
           +LA+DN A+S LSGKP D+++++LS HVILDYYD +KL +  T N TT+LTTLFQASG A
Sbjct: 61  VLAVDNSALSSLSGKPNDLIKKVLSAHVILDYYDVEKLTKAGTSNKTTMLTTLFQASGQA 120

Query: 121 RNQQGFIKVTQISHGEIAFGSAVRGSQFDSRLVKSVVAQPYNICVLQISSPIQVPGIDVK 180
             Q+GFI V  I+ GEIAFGSAV+G+  DS+LVKSV AQP+NI VLQI+ PI +PGID  
Sbjct: 121 VAQEGFINVGLINEGEIAFGSAVKGANLDSKLVKSVAAQPFNISVLQITKPIAIPGIDSS 180

Query: 181 PPRS-------SPSSPPPASFSPVGSPKKAPAPSAKTPSKARAPPAKKPKVVADSPARSP 240
             +S       +P S PPA      +PKKAPA +A  P+K++AP       VA+SPA +P
Sbjct: 181 ASQSPSSAPVPAPKSAPPAKSPVPSTPKKAPA-AAPVPAKSKAPAPSAETPVAESPADTP 240

Query: 241 PKA-----------------ADGEDDAAAPAPSE------KSGVSRGS-FIGAAAVM-AV 273
            +A                 +D   DA  PA S+      KSG SR    +GAA V+ A+
Sbjct: 241 VEAPESDAPSADAPTSDAPVSDAPSDAPGPAGSDVADGPKKSGGSRTEMMVGAAGVLTAL 300

The following BLAST results are available for this feature:

BLAST of Cp4.1LG06g04860.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FLA14_ARATH	1.1e-38	43.97	Fasciclin-like arabinogalactan protein 14 OS=Arabidopsis thaliana GN=FLA14 PE=2 ...	[more]
FLA8_ARATH	4.2e-35	48.04	Fasciclin-like arabinogalactan protein 8 OS=Arabidopsis thaliana GN=FLA8 PE=1 SV...	[more]
FLA10_ARATH	5.5e-35	50.27	Fasciclin-like arabinogalactan protein 10 OS=Arabidopsis thaliana GN=FLA10 PE=1 ...	[more]
FLA3_ARATH	2.0e-32	38.43	Fasciclin-like arabinogalactan protein 3 OS=Arabidopsis thaliana GN=FLA3 PE=2 SV...	[more]
FLA2_ARATH	1.7e-28	41.94	Fasciclin-like arabinogalactan protein 2 OS=Arabidopsis thaliana GN=FLA2 PE=1 SV...	[more]

BLAST of Cp4.1LG06g04860.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJF2_CUCSA	3.4e-84	67.73	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G881690 PE=4 SV=1	[more]
A0A059CR55_EUCGR	8.3e-54	50.34	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C02101 PE=4 SV=1	[more]
A0A0A0LM43_CUCSA	1.5e-47	46.89	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G379090 PE=4 SV=1	[more]
B9N6A9_POPTR	4.4e-47	49.19	Putative surface family protein OS=Populus trichocarpa GN=POPTR_0006s29110g PE=4...	[more]
U5FFK2_POPTR	1.7e-46	46.98	Putative surface family protein OS=Populus trichocarpa GN=POPTR_0018s03790g PE=4...	[more]

BLAST of Cp4.1LG06g04860.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G12660.1	6.1e-40	43.97	FASCICLIN-like arabinogalactan protein 14 precursor	[more]
AT2G45470.1	2.4e-36	48.04	FASCICLIN-like arabinogalactan protein 8	[more]
AT3G60900.1	3.1e-36	50.27	FASCICLIN-like arabinogalactan-protein 10	[more]
AT2G24450.1	1.1e-33	38.43	FASCICLIN-like arabinogalactan protein 3 precursor	[more]
AT4G12730.1	9.7e-30	41.94	FASCICLIN-like arabinogalactan 2	[more]

BLAST of Cp4.1LG06g04860.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449437354\|ref\|XP_004136457.1\|	4.9e-84	67.73	PREDICTED: fasciclin-like arabinogalactan protein 14 [Cucumis sativus]	[more]
gi\|659132683\|ref\|XP_008466329.1\|	1.4e-83	67.14	PREDICTED: fasciclin-like arabinogalactan protein 14 [Cucumis melo]	[more]
gi\|629116029\|gb\|KCW80704.1\|	1.2e-53	50.34	hypothetical protein EUGRSUZ_C02101 [Eucalyptus grandis]	[more]
gi\|702298247\|ref\|XP_010048457.1\|	1.2e-53	50.34	PREDICTED: fasciclin-like arabinogalactan protein 3 [Eucalyptus grandis]	[more]
gi\|1009136043\|ref\|XP_015885320.1\|	7.7e-53	50.16	PREDICTED: fasciclin-like arabinogalactan protein 14 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR000782	FAS1_domain

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG06g04860	Cp4.1LG06g04860	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG06g04860.1:cds:001	Cp4.1LG06g04860.1:cds:001	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG06g04860.1	Cp4.1LG06g04860.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000782	FAS1 domain	GENE3D	G3DSA:2.30.180.10		coord: 24..131 score: 4.
IPR000782	FAS1 domain	PROFILE	PS50213	FAS1	coord: 22..154 score: 9
IPR000782	FAS1 domain	unknown	SSF82153	FAS1 domain	coord: 29..172 score: 4.84
None	No IPR available	PANTHER	PTHR32382:SF6	FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 14	coord: 1..269 score: 4.0