Cp4.1LG05g15250.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTTGCTTCGTCCGTGTCCGATTCTTCAACCTTCATTGAAGCAGGGAAGCGAACTGAAAGCGAGTTGTTTCTCCAGGCAACCATTTTCCACATCCAATCCACTCAGCTCATATGAAATTTCTTCATTCATTTCGATTTTATCAATCCCGAATTTAGTATCAAGGAATTCCTTATCGTGTTTCTCTGATCTCGATTTTGATCTCACGATCTCTCGAATCGCGTTATTTTTTCTCCATGGAAGAGCAGCAGAAGACGGCGAAAGATCAAGAACTCAAGGAGGATCATGAAGAAAATGACGCAATTGAGCTTGTTCTCTTTCAAGTTTCTGAATGTTATGTCTATTTGGTGAGTAAATTAGCCCGGCCTATCTCACAGAAATCTAAGTTTTTAGTTCTGATGCAGAAATCTAAGCTTTCTTGTGGCCTTCTTTTGCGATTACTCGAATGTGAAGTAGTTGTTAGCACCATAGTTGATTATATCCTCTTCGAAATCGCTGATATCGTGTTTGGCCTATTTTGTGCATTTGTCTTATCAATAGGTTCCCTTTGTGAAGGGTTCTTCTTGTGCTTACGTACTATGCCTACTTCTGTAAAATCATGCAATTGAAATATATTAGTAATGGAGATGTAGGTTGTCACTATTTGATATCTATCCACATTTTCCCTCATAGTGGGATTATGTTTATATGAATAACGATAGAAAATTAGTGTTCTGTATCTGCTGGTTCTTCACTGCCGTGTAGTAAAACTACAAGATATTTTCCTGTGTATGATAATATTAGCCTTTTCTGGATATTTTATCTCTTCAATTCAATTGATTTTTCTTCATCTTGTTCTTAATCTCATTTTTATGATCTTTTTGCAGATACCCCCAAGAAAAAGTGCAGCTTCCTACAGGTTTTAACTGTAACTTTGATGGATAATGGATATAACTGTGAATTGTAATTTGATCTTGATATCGTACAGAAACTTTATTGTCGGCTGATATTATGTCCCCTAGATCAAATTGATGATTTCATTGTTTACTTATAATTCCAATTTAGTTTAGTATTACGAAAAGTAACTACAAGAAAGAATTTGATAGTACATATCAGCTAGATGCCTGAGATTTAGCTTGAATAGATCTAAAATCTCCCCCCAAGACATGCATATCTTTGAAGAGTCTGATGTTCCTTTCAATATTCTCATGTAAGATCTTTTATCGAATTGGCCCACAAAGTCTTGGCCTTTTCTTCAAAGCTCTGCCCACGCAGTAGCTGTTCAATATTATGTTTTGTAGGGCCTGTTAGCAACCAACAGACATTGAATAATGGGAACACAAAGGACCACACTTTAAGAGCTATCAGCACCCAAGAATCACTAAACTATTCTCACTCTCAGTCATTATGATCTTGCCTGTAATATTTAATGACTAAAAAATAAGTATTTGTCTGTATAGATTTATTCCTAGCTGTGAAGAACAGATAATGTATCCTTGTATGATGGTTAATGAGTAAACACTATATTAGATGTTTATTGTTGTAAAAATTCACTATCTATGCTTGCCATTTACGACTTAGTTTTGAAATCAACTATATATACTCTGCCAACTTAGTTTTCCACATGTGCTTTGATTACCTTAAGGGCTGATGAATGGGATGTGAATAAATGGGCCTGGGAGGGAAAACTGAAAGTCCTTAGCAAGGGAGAAGAATGCATTATTAGACTTGAAGATAAGAGCACAGGTGAGATTATCTCTTAGTTGCTACAAAAGAAGTATTGTGGATCTGTGGTGTTTAAATGGTAGGTGAAGTATATTATTGCAGATGAGGCATATATGGTGTGTTGCTGGCTAATTAGCTGTTTATCATTATAATAGGTGAATTATATGCTCGGGCGTTCTTGAGAGATGGAGAACCGCATCCAGTTGAACCTGTAATTGATAGCAGCAGGTTGATTTCATTTTTAATTGAACTCTAACTCTAATCTTACCAGTATTCTTTGTTGGCCTAAACTTTTGTGTCTAAATTGTAAGTTTGGTTGATCTTCTTAGTCCAAGTAGTTAACAGTCAGTGTCTAAGTTAGAAGTTCAGCTCAGATGAATATATTTTAACATCTTTACCTTGTTTTAACACTTCATTTGAAAATGTCTGATGTGATGTTCTATTATTGCAGATATTTTGTTCTTCGCATAGAAGAAAATATCGGTGAGCTTTGGGGGCTCTCGCCTACCTTTCTACACCCTGAATTGACTTCTAATATATCTCATTATGATGTGATATTTATTTGTGAAACATGCGACCAACTGACACTTAGAGGCTGTAGAATAGAAACAATTTGAGTCGAACAGTTAATAATTATGAATGAATACTATGTAGATGGTCGCCGTCGGCATGCCTTTATTGGGTTAGGGTTTCGAGAAAGAACTGAGGCATATGACTTCCAAGCAGCTTTGCATGATCATATGAAGTAAATGTCCTTCTACTCTACAAATATTCTATTTGCATGTACTTGTTCATCCAAAAAATAGAATTTTCTTGGGAAGAATGCGCTTTCTATATTTTTTTTTTTGAAAAAGGTATCTCAATAAAAAGAAGAGTGCAGAAGAGATGGAACAACAGTTCCAGAAAACATCCTTAGTTGATTATAGTTTGAAAGAAGGGGAGACTATTGTACTACAGTTAAAAAGCAAAGTAAGCTGATTTTCATTTCATTTCATTGATTTCTGCATCAACTTGTTCATTGCTCCCTTATAATAGATCTCATCTCATCTTTACTTTACACATTTTTTGTGACCAACAGAAAAGCTTTAGCAGCATCAAGAAATCTTCTGAGCTTGATCTGAAAGTCTCCTCCTCATCAGAAGAAGAAGAGGGCAACACAAAAAAAGAGTCCATTTTTTGTATCAAACCACCCCCACCTCCACCAGCACCACTTTCACCTGTTCCAGCTCAGGAGTCTCCTACAAATTTTCCGCCAAACATCAATCTTGAAGAAACTTCTAAGCACAAGGAAGACTCCAATGCTGCTGAAGGTCAAAGCACAGTGGATTTACCTGATGATGACTTTGGAGATTTTCAGACAGCTGGGTGATGACATGGACTGTGACATGGAACTTGTACATTCTCGAATTCCCTAATCGATCTTCGGTTTTCAATAGATTGCGTGGTACAAACTGCTTAGTTTTCACAAGAGATCTTATGTACTGTTGTTAAACCTAGTTTGTGAAATTAGCTTGAAGAGTTGCCAATAAAAAGTGATCCCAAAATTCAGCAGTCCTATGATATAACGATGATGAAGCTCAAGTAAAGAGACAAAAGGGAATATGGAATATCATGGAAATTTATTTCTTTCAAGCTTTA ATGGAGCAGCAGAAGACGGCGAAAGATCAAGAACTCAAGGAGGATCATGAAGAAAATGACGCAATTGAGCTTGTTCTCTTTCAAGTTTCTGAATGTTATGTCTATTTGATACCCCCAAGAAAAAGTGCAGCTTCCTACAGGGCTGATGAATGGGATGTGAATAAATGGGCCTGGGAGGGAAAACTGAAAGTCCTTAGCAAGGGAGAAGAATGCATTATTAGACTTGAAGATAAGAGCACAGGTGAATTATATGCTCGGGCGTTCTTGAGAGATGGAGAACCGCATCCAGTTGAACCTGTAATTGATAGCAGCAGATATTTTGTTCTTCGCATAGAAGAAAATATCGATGGTCGCCGTCGGCATGCCTTTATTGGGTTAGGGTTTCGAGAAAGAACTGAGGCATATGACTTCCAAGCAGCTTTGCATGATCATATGAAGTATCTCAATAAAAAGAAGAGTGCAGAAGAGATGGAACAACAGTTCCAGAAAACATCCTTAGTTGATTATAGTTTGAAAGAAGGGGAGACTATTGTACTACAGTTAAAAAGCAAAAAAAGCTTTAGCAGCATCAAGAAATCTTCTGAGCTTGATCTGAAAGTCTCCTCCTCATCAGAAGAAGAAGAGGGCAACACAAAAAAAGAGTCCATTTTTTGTATCAAACCACCCCCACCTCCACCAGCACCACTTTCACCTGTTCCAGCTCAGGAGTCTCCTACAAATTTTCCGCCAAACATCAATCTTGAAGAAACTTCTAAGCACAAGGAAGACTCCAATGCTGCTGAAGGTCAAAGCACAGTGGATTTACCTGATGATGACTTTGGAGATTTTCAGACAGCTGGGTGATGACATGGACTGTGACATGGAACTTGTACATTCTCGAATTCCCTAATCGATCTTCGGTTTTCAATAGATTGCGTGGTACAAACTGCTTAGTTTTCACAAGAGATCTTATGTACTGTTGTTAAACCTAGTTTGTGAAATTAGCTTGAAGAGTTGCCAATAAAAAGTGATCCCAAAATTCAGCAGTCCTATGATATAACGATGATGAAGCTCAAGTAAAGAGACAAAAGGGAATATGGAATATCATGGAAATTTATTTCTTTCAAGCTTTA ATGGAGCAGCAGAAGACGGCGAAAGATCAAGAACTCAAGGAGGATCATGAAGAAAATGACGCAATTGAGCTTGTTCTCTTTCAAGTTTCTGAATGTTATGTCTATTTGATACCCCCAAGAAAAAGTGCAGCTTCCTACAGGGCTGATGAATGGGATGTGAATAAATGGGCCTGGGAGGGAAAACTGAAAGTCCTTAGCAAGGGAGAAGAATGCATTATTAGACTTGAAGATAAGAGCACAGGTGAATTATATGCTCGGGCGTTCTTGAGAGATGGAGAACCGCATCCAGTTGAACCTGTAATTGATAGCAGCAGATATTTTGTTCTTCGCATAGAAGAAAATATCGATGGTCGCCGTCGGCATGCCTTTATTGGGTTAGGGTTTCGAGAAAGAACTGAGGCATATGACTTCCAAGCAGCTTTGCATGATCATATGAAGTATCTCAATAAAAAGAAGAGTGCAGAAGAGATGGAACAACAGTTCCAGAAAACATCCTTAGTTGATTATAGTTTGAAAGAAGGGGAGACTATTGTACTACAGTTAAAAAGCAAAAAAAGCTTTAGCAGCATCAAGAAATCTTCTGAGCTTGATCTGAAAGTCTCCTCCTCATCAGAAGAAGAAGAGGGCAACACAAAAAAAGAGTCCATTTTTTGTATCAAACCACCCCCACCTCCACCAGCACCACTTTCACCTGTTCCAGCTCAGGAGTCTCCTACAAATTTTCCGCCAAACATCAATCTTGAAGAAACTTCTAAGCACAAGGAAGACTCCAATGCTGCTGAAGGTCAAAGCACAGTGGATTTACCTGATGATGACTTTGGAGATTTTCAGACAGCTGGGTGA MEQQKTAKDQELKEDHEENDAIELVLFQVSECYVYLIPPRKSAASYRADEWDVNKWAWEGKLKVLSKGEECIIRLEDKSTGELYARAFLRDGEPHPVEPVIDSSRYFVLRIEENIDGRRRHAFIGLGFRERTEAYDFQAALHDHMKYLNKKKSAEEMEQQFQKTSLVDYSLKEGETIVLQLKSKKSFSSIKKSSELDLKVSSSSEEEEGNTKKESIFCIKPPPPPPAPLSPVPAQESPTNFPPNINLEETSKHKEDSNAAEGQSTVDLPDDDFGDFQTAG
BLAST of Cp4.1LG05g15250.1 vs. Swiss-Prot
Match: Y1390_ARATH (Uncharacterized protein At1g03900 OS=Arabidopsis thaliana GN=At1g03900 PE=2 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 1.4e-30 Identity = 97/263 (36.88%), Postives = 141/263 (53.61%), Query Frame = 1
BLAST of Cp4.1LG05g15250.1 vs. Swiss-Prot
Match: NECP2_BOVIN (Adaptin ear-binding coat-associated protein 2 OS=Bos taurus GN=NECAP2 PE=2 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 5.5e-30 Identity = 71/168 (42.26%), Postives = 104/168 (61.90%), Query Frame = 1
BLAST of Cp4.1LG05g15250.1 vs. Swiss-Prot
Match: NECP2_HUMAN (Adaptin ear-binding coat-associated protein 2 OS=Homo sapiens GN=NECAP2 PE=1 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 1.6e-29 Identity = 69/168 (41.07%), Postives = 103/168 (61.31%), Query Frame = 1
BLAST of Cp4.1LG05g15250.1 vs. Swiss-Prot
Match: NECP2_RAT (Adaptin ear-binding coat-associated protein 2 OS=Rattus norvegicus GN=Necap2 PE=1 SV=2) HSP 1 Score: 130.6 bits (327), Expect = 2.7e-29 Identity = 68/168 (40.48%), Postives = 103/168 (61.31%), Query Frame = 1
BLAST of Cp4.1LG05g15250.1 vs. Swiss-Prot
Match: NECP2_MOUSE (Adaptin ear-binding coat-associated protein 2 OS=Mus musculus GN=Necap2 PE=1 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 3.6e-29 Identity = 68/168 (40.48%), Postives = 103/168 (61.31%), Query Frame = 1
BLAST of Cp4.1LG05g15250.1 vs. TrEMBL
Match: A0A0A0KHL0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G239700 PE=4 SV=1) HSP 1 Score: 459.1 bits (1180), Expect = 3.7e-126 Identity = 237/284 (83.45%), Postives = 259/284 (91.20%), Query Frame = 1
BLAST of Cp4.1LG05g15250.1 vs. TrEMBL
Match: W9RYM3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_004799 PE=4 SV=1) HSP 1 Score: 388.3 bits (996), Expect = 8.1e-105 Identity = 211/289 (73.01%), Postives = 239/289 (82.70%), Query Frame = 1
BLAST of Cp4.1LG05g15250.1 vs. TrEMBL
Match: M5XER6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009741mg PE=4 SV=1) HSP 1 Score: 381.3 bits (978), Expect = 9.9e-103 Identity = 200/283 (70.67%), Postives = 230/283 (81.27%), Query Frame = 1
BLAST of Cp4.1LG05g15250.1 vs. TrEMBL
Match: A0A061DS85_THECC (Adaptin ear-binding coat-associated protein 1 NECAP-1 isoform 1 OS=Theobroma cacao GN=TCM_001687 PE=4 SV=1) HSP 1 Score: 376.7 bits (966), Expect = 2.4e-101 Identity = 208/295 (70.51%), Postives = 238/295 (80.68%), Query Frame = 1
BLAST of Cp4.1LG05g15250.1 vs. TrEMBL
Match: A0A061DJH0_THECC (Adaptin ear-binding coat-associated protein 1 NECAP-1 isoform 2 OS=Theobroma cacao GN=TCM_001687 PE=4 SV=1) HSP 1 Score: 376.7 bits (966), Expect = 2.4e-101 Identity = 208/295 (70.51%), Postives = 238/295 (80.68%), Query Frame = 1
BLAST of Cp4.1LG05g15250.1 vs. TAIR10
Match: AT3G58600.1 (AT3G58600.1 Adaptin ear-binding coat-associated protein 1 NECAP-1) HSP 1 Score: 347.1 bits (889), Expect = 1.0e-95 Identity = 191/294 (64.97%), Postives = 226/294 (76.87%), Query Frame = 1
BLAST of Cp4.1LG05g15250.1 vs. TAIR10
Match: AT1G03900.1 (AT1G03900.1 non-intrinsic ABC protein 4) HSP 1 Score: 134.8 bits (338), Expect = 8.2e-32 Identity = 97/263 (36.88%), Postives = 141/263 (53.61%), Query Frame = 1
BLAST of Cp4.1LG05g15250.1 vs. NCBI nr
Match: gi|659113093|ref|XP_008456431.1| (PREDICTED: uncharacterized protein At1g03900 isoform X2 [Cucumis melo]) HSP 1 Score: 463.8 bits (1192), Expect = 2.2e-127 Identity = 243/286 (84.97%), Postives = 262/286 (91.61%), Query Frame = 1
BLAST of Cp4.1LG05g15250.1 vs. NCBI nr
Match: gi|449465216|ref|XP_004150324.1| (PREDICTED: uncharacterized protein At1g03900 isoform X2 [Cucumis sativus]) HSP 1 Score: 459.1 bits (1180), Expect = 5.4e-126 Identity = 237/284 (83.45%), Postives = 259/284 (91.20%), Query Frame = 1
BLAST of Cp4.1LG05g15250.1 vs. NCBI nr
Match: gi|659113091|ref|XP_008456429.1| (PREDICTED: uncharacterized protein At1g03900 isoform X1 [Cucumis melo]) HSP 1 Score: 392.5 bits (1007), Expect = 6.2e-106 Identity = 208/241 (86.31%), Postives = 219/241 (90.87%), Query Frame = 1
BLAST of Cp4.1LG05g15250.1 vs. NCBI nr
Match: gi|703109721|ref|XP_010099373.1| (Uncharacterized protein L484_004799 [Morus notabilis]) HSP 1 Score: 388.3 bits (996), Expect = 1.2e-104 Identity = 211/289 (73.01%), Postives = 239/289 (82.70%), Query Frame = 1
BLAST of Cp4.1LG05g15250.1 vs. NCBI nr
Match: gi|778714208|ref|XP_011657208.1| (PREDICTED: uncharacterized protein At1g03900 isoform X1 [Cucumis sativus]) HSP 1 Score: 387.9 bits (995), Expect = 1.5e-104 Identity = 202/239 (84.52%), Postives = 216/239 (90.38%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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