Cp4.1LG05g13390.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCGAGGACCATAGTTCTGATCCACGTGTCTTTCTGCGAGTCTTTAAGCATTACGTCCTTCAGCTCGTGAAATCTACTCGGAATTTGCAGCACATTGATCATTTTGCGTCCATTTTTGGTTTTGATGAGCAAATATCAATGCATTTTCGAGGTGATTTGATGCACTGAGCAGTGAAGCAACTGTATGAAATTGAGAATTGAAGATTTCTTCTTCCTTCCGATTCCACATGGCTCTCGCTACTTCATCGGAGCGGTTCCTATGAACTAAGGTAAGAACGAACGCTTTTGATGCAATTTGATTTGGATTTGGTTAAGCTAATTTGCTTTTTTTGCAAAGAGGTTCGCGATTTAGTGTTAATTTTGAAATGGAGAATATGATCAGTTCGTGTTCTGTCGTTGAAATTGTTTTGAATTTCAAATTTGTTTCTGCTTCGTTTTGAATTCTATTTAGGTTTTCTCTGAGCTAATTTCGCGTTTTGAGAACTGATTACTTCTTATTAATGATCGGTTTTTCTTTTCATCCTGCATCCTCGCGTTTTTAATCGCAAGAGATGCTAGCAAAAACTGGAAAAATAGAAGAAGCAAGACACTTGTGATTATGCTTCTCAAGTTTTTTTTGTTTCCCCTTCAGTGTTGTAATGTCTTTCAATATGTGAGTAATGCTATAGCAGCCCAAGCCCACCTTGAGTAGATATTGTCCACTTTAGCTCGTTACATATCGTCGTCAGCCTCATAGTTTTAAACGCGTCTACTAGGGATAGGTTTCCACACGTTTATAAGGAATATTTCGTTCCCCTTTCCAATCGATGTGGGATCTCACAATCCACTCTCCTTGAGGGCCCAACGTCCTCGCTGGCACACCGCTCGAAACCTGGCTCTGATACTATTTGTAATAGCTCAAACCCACCGCTAGTAGATATTGTCTGGTTTAACCTGTTACATATCACCGTCTACCTTACGATTTTAAACGCATCTGCTAGGAAGAGGTTTCGATACCCTTATAAGAAATATTTCGTTCCCCTCTCCAACCAACGTAAATCTCACAAATGCATTGGGTTTCGACGATTATCTCTGAGATTGTCTGAAGACGCTTCGGTTGGCTCTAAGCTTGGCACTTCATTTCCATTAACCTATGTCAAAGTACGTTCTAGGAATAAATACCTCCATCAGTCTATTCAAACCACTCAAACAAAAGATAAAGTTAGAAAATGAATAGAAGTCACTGTCTAGAATCTTGCTGATGAAGTGTCAAAGGTTAACATTGTATTTTATTGATACTTTGTATTACAAATTTAAAGGCGTATTCTTTCATAATGTTGGAAATGTGGAACTGCTGCAAAACTCTCTTGGGACAGGTTGTGTTTGTATTATACTGGCTGATATCTAATATTTCTTGTGTTCTTTGATTTTATTATCTAACTATGAGATCTCACATCGGTTAGTGAGGAAATCGAAACATTATTTATAATAGTGTGAAAACCTCTCCCTAGCAAACGCGTTTTAAAACCTTGAGGAGAAGCCCGAAAGGAAAAGCTCAAAGAGGACAATATATGCTAGCGGTGGGCTTGGACCGTTACACTAACTATTTAATGTTATATTGTTTGACGTCTAACAGTTTACTGCAAACCTTAAGCTTAGTTGTTATTGGCTTCTTCTATAAATTCATAACCTATTATGGGCTCCCAAGGAGGGTAGATTGTGAGATCCCACATCGGTTGAAGAGGAAAATGAAGCATTTCTTGTGTAGAAACCTCTCCCTAGTAGACGCATTTTAAAAACCTTGAGGGGAAGCCCGGAAAGGAAAACCCAAAGAGAATAATATAGAATAATATTTTTTAATGGTGGGCTTGGACTGTTATAGATATATTATCGGTCATGATATTATTGTTCATAGGATAACATTTGTTGTTCATATATCTATGGGTATCTTTTGAGTGTTCATTTGAATTATATGTTTCTGTTTCTTGATCTCTCCAATATTTGTATTATGTATCTCTTCAAATTTTGAAACATTTCAGATGGTTCAGAAATCCATAGACTCCAAAGTAAGTGATTCTGGGAAGGAAGCGCCTGCTCATGAAAAGCAACTGCAGATTTCTGCCAAGAAGACAGCATTAAGAGACTTGCAAAATGATAATAGGCTCGCAGCTTCCAACTGTACCGGAAGAGGTCCGAGCAGCGAGTTCATTAAAGTTTCTAGTAACAATAAGCCCTCTCCCGTCTTCACAACGAGTCCGCCTCGTCTCCTTTCTTCGACATCGAATACCGCAAATGGGCACCTCGTTTATATCCGTAGAAAATCCGATGCAGATATAGCAAAGAGTAGTCCTTGTGATAGTTCAAGCATAAAAGCTGATTATCAGAGTAAACTTGGTCAATTAGCTGAAACTGTGCATCTAAAATCCCACGTCAAGGAGTTACAGAACCATTGCTTCCCTGCATTTTCTCCTTCTACAGTGGTGTTTCCCATGAATGCCAACGGTAAATCTTCAGTTCCTCATAAGTATGGCATTAATTTACCCACAGCAGAATCAGACTTTGATTCTGCAGGATGGAAAAATTTGCAGTGGGAACACAGATATCATCAGTTGGAGTTGTTACTGAATAAATTGAACCAATCAGATCAACAAGATTATCTTCAGGGTATGTTCTTCATTTAAGAAAGTGCTTCATCTTATTCCTGAAATAGTTTGAATGAAACTTATTTACTTAATGAATGATTTTACTTTTTTTTTTTCTTTTTTTTTTATCAGTGCTTCGATCGTTGTCATCAGTTGAACTTAGCAGACATGCAGTTGAATTGGAAAAGAGATCCATTCATCTCTCGTTTGAGGAAGGTAGTTTGATATCTGTATTACCTAACTTCACTTTCCTTTTCTGTGATCCTGGGAAAACTATTATAGTCTGCAAAATGAGTTGTTGACAAATTGTTATGTTTGATTCAATTATTTTTGTTCATTGCGGTCTCGTGTGTTTCCATATTGCTTTGAACTTTTGACTTTCCATGATGATTTTTCTTCTTTGGGCTGAAGAAGTCATGGATGTGGACATCTCAAGATTGGATAATTTTTAATATGTTAGTTGAAACCTTATCCCTCCTTTATCTTAAGCTTCCTCTCTCTGTTGGATTTCGACTTGCAAGCATAGAAAGAAGTATATTGTAACAGCTCAAGCCCACCGCTAGTAAAGAAGTATATTGTAACAGCTCAAGCCCACAGCTAGTAAATATTGTTCTGTTTGGGCTTTTCTTTTCGGGGTTCCCCTCAAGGTTTTTAAAACGCATTTGCTAGGGAGATGTTTCCACACTCTTATAAAGAATGCTTCGTTCTCCTCCCCAACCGATGTGGGATCTCACAATTCACCCCCCTTCGGGGCCCAGCATTCTCGCTGGCACTCATTCCCTTCTTCAATCGATGTGGGACCCCCCAATCCACCCTTCTTCGTTGCCCAGTGTCCTTGCTGGCATACCACCTCGTGTCCACACCTCTTCGGGGCTCAGCCTCCTTACTGGCACATCGCCTGGTGTCTGGCTCTGATACCATTTGTAACAGCCCAAGCCCACTGCTAGCAGATATTGTCTTTTTTGGGCTTTCCCTCAAGGTTTTTAAAACGAGTCTGCTAGGGAGAGGTTTCCACACCCTTATAAAGAATGCTTTGTTCTCCTCTCCAACCGACGTGAAATCTCAACTGTCAAATTACAAAACGAAGGGAGTAAAAAAAAGTTCCAAATTTGTTATGAATATTGCTTGGGCACAGAACAGTTTCGCTTATGAACAAGACTGAAATGCTAAAATATATAATGGAGAAAGACTTGTCAAGGATCTGATTGGATGAAAAAAGGCATCAGCTTTCCGCGAGCATTTAACATTCCCTATAAAATACCAAAACTTGCCATCAGATGAACGAAGTCTATAGCTAGTCTTTTCCTTGGGCTTATCTCCTGAAAGTAAGTTTGAAGCCTTCTTTTTTTTATTTCAGCCTAATGGTAACTATTGATGATTGTTGGGAGAGAGTCCTACCTTGGCTAATTAAGGGGATGATCATGAGTTTATAAGTAAGGAATATATCTCCATTGGTACGAGGCCTTTTCGGGAAACTAAAAGTAAAGTCACAAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGGTTCGTGGTTCCTAACATGGTATTAGAGTCATGCCCTTAACTTAGCCATGTCAATAGAATCCTCAATTGTCGAACAAAGAAGTTGTGAGCCTCGAAGGTGTAGTAAAAAATGACTCAAGTTTCAAACAAATGGTGTACTTTGTTTGAGGGCTCCAAAGAAAAGCGTCAAATCTCGATTAAGGGGAGGCTGTTCGAGGGCTTCAGAGGAAGGAGTCAAATCTCGATTAAGGGGAGGCTGTTCGAGGGCTCCATAGGCCCCAGGGAAGGCTCTATGGTGCACTTTGTTCGAGGGGAGGATTCTTGAGGATTGTTGGGAGGGAGTCCCATATTGACTCGTTAAGGTGATGATCTTGGGTTTATAAGTAAAGAATACATCTTTATTGGTACGAGGCCTTTTGGAGAAACAAAAAGTAAAGCCATGAGAGCTTAAGCTCAGAATGGACAATATCATACTATTGTGGAGATTTGGGATTCCTGACCGTACCTCTTATTTTTTTAGTCCTTCCTAGTTTTGCTTTGGAGCATGATCCAAGTAACATAAAATTCCTCTTTTCTTCATGACAGCAAAAGAGTTGCAGCGAGTTGGGGTCTTGAATGTGCTGGGAACTCCTGTGAACAATATCAAACTGCCATTGGCTCATCAAGACGGATCAGAGATGTAATCGTATAGACATAACATGTTTTTCTTTTTCAACCTATTGTTCTTCAAGTAGGACGAAGATAGCGTTCTGGACTGCGATTGCATCGAGTTTGCTCAGAATTCGCCATTCTCAGTCGCCACGAACCAGATGTTTGCTGGTTTCTAGTAATATTCTGCCTACTATTCCTCCTCCTCATAATAGTTCTCACGTGTTTGACAAAGGTTTTAAGAAAAGATTGCTACTGTATGTGACTGTTACCAGGAAGAAAAATGGAAACAGATCCACTTCCGTATAAATGCTTCTTTTTTTAATCCTGTTGGCGAATGTGTTCCTCATTTGAATTTGTTTTATTGTCTTTGATTGAGTTTATGTCACAGGAAAAA TCGAGGACCATAGTTCTGATCCACGTGTCTTTCTGCGAGTCTTTAAGCATTACGTCCTTCAGCTCGTGAAATCTACTCGGAATTTGCAGCACATTGATCATTTTGCGTCCATTTTTGGTTTTGATGAGCAAATATCAATGCATTTTCGAGGTGATTTGATGCACTGAGCAGTGAAGCAACTGTATGAAATTGAGAATTGAAGATTTCTTCTTCCTTCCGATTCCACATGGCTCTCGCTACTTCATCGGAGCGGTTCCTATGAACTAAGATGGTTCAGAAATCCATAGACTCCAAAGTAAGTGATTCTGGGAAGGAAGCGCCTGCTCATGAAAAGCAACTGCAGATTTCTGCCAAGAAGACAGCATTAAGAGACTTGCAAAATGATAATAGGCTCGCAGCTTCCAACTGTACCGGAAGAGGTCCGAGCAGCGAGTTCATTAAAGTTTCTAGTAACAATAAGCCCTCTCCCGTCTTCACAACGAGTCCGCCTCGTCTCCTTTCTTCGACATCGAATACCGCAAATGGGCACCTCGTTTATATCCGTAGAAAATCCGATGCAGATATAGCAAAGAGTAGTCCTTGTGATAGTTCAAGCATAAAAGCTGATTATCAGAGTAAACTTGGTCAATTAGCTGAAACTGTGCATCTAAAATCCCACGTCAAGGAGTTACAGAACCATTGCTTCCCTGCATTTTCTCCTTCTACAGTGGTGTTTCCCATGAATGCCAACGGTAAATCTTCAGTTCCTCATAAGTATGGCATTAATTTACCCACAGCAGAATCAGACTTTGATTCTGCAGGATGGAAAAATTTGCAGTGGGAACACAGATATCATCAGTTGGAGTTGTTACTGAATAAATTGAACCAATCAGATCAACAAGATTATCTTCAGGTGCTTCGATCGTTGTCATCAGTTGAACTTAGCAGACATGCAGTTGAATTGGAAAAGAGATCCATTCATCTCTCGTTTGAGGAAGCAAAAGAGTTGCAGCGAGTTGGGGTCTTGAATGTGCTGGGAACTCCTGTGAACAATATCAAACTGCCATTGGCTCATCAAGACGGATCAGAGATGTAATCGTATAGACATAACATGTTTTTCTTTTTCAACCTATTGTTCTTCAAGTAGGACGAAGATAGCGTTCTGGACTGCGATTGCATCGAGTTTGCTCAGAATTCGCCATTCTCAGTCGCCACGAACCAGATGTTTGCTGGTTTCTAGTAATATTCTGCCTACTATTCCTCCTCCTCATAATAGTTCTCACGTGTTTGACAAAGGTTTTAAGAAAAGATTGCTACTGTATGTGACTGTTACCAGGAAGAAAAATGGAAACAGATCCACTTCCGTATAAATGCTTCTTTTTTTAATCCTGTTGGCGAATGTGTTCCTCATTTGAATTTGTTTTATTGTCTTTGATTGAGTTTATGTCACAGGAAAAA ATGGTTCAGAAATCCATAGACTCCAAAGTAAGTGATTCTGGGAAGGAAGCGCCTGCTCATGAAAAGCAACTGCAGATTTCTGCCAAGAAGACAGCATTAAGAGACTTGCAAAATGATAATAGGCTCGCAGCTTCCAACTGTACCGGAAGAGGTCCGAGCAGCGAGTTCATTAAAGTTTCTAGTAACAATAAGCCCTCTCCCGTCTTCACAACGAGTCCGCCTCGTCTCCTTTCTTCGACATCGAATACCGCAAATGGGCACCTCGTTTATATCCGTAGAAAATCCGATGCAGATATAGCAAAGAGTAGTCCTTGTGATAGTTCAAGCATAAAAGCTGATTATCAGAGTAAACTTGGTCAATTAGCTGAAACTGTGCATCTAAAATCCCACGTCAAGGAGTTACAGAACCATTGCTTCCCTGCATTTTCTCCTTCTACAGTGGTGTTTCCCATGAATGCCAACGGTAAATCTTCAGTTCCTCATAAGTATGGCATTAATTTACCCACAGCAGAATCAGACTTTGATTCTGCAGGATGGAAAAATTTGCAGTGGGAACACAGATATCATCAGTTGGAGTTGTTACTGAATAAATTGAACCAATCAGATCAACAAGATTATCTTCAGGTGCTTCGATCGTTGTCATCAGTTGAACTTAGCAGACATGCAGTTGAATTGGAAAAGAGATCCATTCATCTCTCGTTTGAGGAAGCAAAAGAGTTGCAGCGAGTTGGGGTCTTGAATGTGCTGGGAACTCCTGTGAACAATATCAAACTGCCATTGGCTCATCAAGACGGATCAGAGATGTAA MVQKSIDSKVSDSGKEAPAHEKQLQISAKKTALRDLQNDNRLAASNCTGRGPSSEFIKVSSNNKPSPVFTTSPPRLLSSTSNTANGHLVYIRRKSDADIAKSSPCDSSSIKADYQSKLGQLAETVHLKSHVKELQNHCFPAFSPSTVVFPMNANGKSSVPHKYGINLPTAESDFDSAGWKNLQWEHRYHQLELLLNKLNQSDQQDYLQVLRSLSSVELSRHAVELEKRSIHLSFEEAKELQRVGVLNVLGTPVNNIKLPLAHQDGSEM
BLAST of Cp4.1LG05g13390.1 vs. TrEMBL
Match: A0A0A0KAB4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G118870 PE=4 SV=1) HSP 1 Score: 292.7 bits (748), Expect = 4.4e-76 Identity = 174/287 (60.63%), Postives = 201/287 (70.03%), Query Frame = 1
BLAST of Cp4.1LG05g13390.1 vs. TrEMBL
Match: M5VKI1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008919mg PE=4 SV=1) HSP 1 Score: 221.1 bits (562), Expect = 1.6e-54 Identity = 153/317 (48.26%), Postives = 187/317 (58.99%), Query Frame = 1
BLAST of Cp4.1LG05g13390.1 vs. TrEMBL
Match: B9SMC9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0512630 PE=4 SV=1) HSP 1 Score: 211.5 bits (537), Expect = 1.3e-51 Identity = 131/289 (45.33%), Postives = 177/289 (61.25%), Query Frame = 1
BLAST of Cp4.1LG05g13390.1 vs. TrEMBL
Match: A0A0B0MFN2_GOSAR (Translation initiation factor IF-2 OS=Gossypium arboreum GN=F383_11826 PE=4 SV=1) HSP 1 Score: 206.8 bits (525), Expect = 3.2e-50 Identity = 131/292 (44.86%), Postives = 176/292 (60.27%), Query Frame = 1
BLAST of Cp4.1LG05g13390.1 vs. TrEMBL
Match: A0A067LD58_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03092 PE=4 SV=1) HSP 1 Score: 206.1 bits (523), Expect = 5.5e-50 Identity = 133/294 (45.24%), Postives = 180/294 (61.22%), Query Frame = 1
BLAST of Cp4.1LG05g13390.1 vs. TAIR10
Match: AT4G38280.1 (AT4G38280.1 BEST Arabidopsis thaliana protein match is: Integral membrane protein hemolysin-III homolog (TAIR:AT2G45250.1)) HSP 1 Score: 102.1 bits (253), Expect = 5.6e-22 Identity = 52/98 (53.06%), Postives = 71/98 (72.45%), Query Frame = 1
BLAST of Cp4.1LG05g13390.1 vs. TAIR10
Match: AT2G45250.2 (AT2G45250.2 Integral membrane protein hemolysin-III homolog) HSP 1 Score: 72.8 bits (177), Expect = 3.6e-13 Identity = 37/55 (67.27%), Postives = 45/55 (81.82%), Query Frame = 1
BLAST of Cp4.1LG05g13390.1 vs. NCBI nr
Match: gi|449444415|ref|XP_004139970.1| (PREDICTED: uncharacterized protein LOC101211824 isoform X1 [Cucumis sativus]) HSP 1 Score: 341.3 bits (874), Expect = 1.6e-90 Identity = 196/295 (66.44%), Postives = 217/295 (73.56%), Query Frame = 1
BLAST of Cp4.1LG05g13390.1 vs. NCBI nr
Match: gi|700191456|gb|KGN46660.1| (hypothetical protein Csa_6G118870 [Cucumis sativus]) HSP 1 Score: 292.7 bits (748), Expect = 6.4e-76 Identity = 174/287 (60.63%), Postives = 201/287 (70.03%), Query Frame = 1
BLAST of Cp4.1LG05g13390.1 vs. NCBI nr
Match: gi|778712630|ref|XP_011656915.1| (PREDICTED: uncharacterized protein LOC101211824 isoform X2 [Cucumis sativus]) HSP 1 Score: 285.4 bits (729), Expect = 1.0e-73 Identity = 171/295 (57.97%), Postives = 192/295 (65.08%), Query Frame = 1
BLAST of Cp4.1LG05g13390.1 vs. NCBI nr
Match: gi|645260720|ref|XP_008235955.1| (PREDICTED: uncharacterized protein LOC103334767 [Prunus mume]) HSP 1 Score: 223.4 bits (568), Expect = 4.7e-55 Identity = 153/317 (48.26%), Postives = 188/317 (59.31%), Query Frame = 1
BLAST of Cp4.1LG05g13390.1 vs. NCBI nr
Match: gi|595793393|ref|XP_007200445.1| (hypothetical protein PRUPE_ppa008919mg [Prunus persica]) HSP 1 Score: 221.1 bits (562), Expect = 2.4e-54 Identity = 153/317 (48.26%), Postives = 187/317 (58.99%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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