Cp4.1LG05g13070.1 (mRNA) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG05g13070.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Translation initiation factor
Location	Cp4.1LG05 : 9243915 .. 9246704 (+)
Sequence length	2212

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGGGCGTTTATTACCGCTTATTCTCTCTGCTCCCCACCGTAACCCATTTACTCAAGAAACCGCAGCGGAGACGAAGAATCCCACGCGATTACTCACAGCGAAGGCATGGCGGCTACTATGTCACCGTGGGGCAAGCCTGGAGCTTGGGCTCTGGATGCGGAGGAGCATGAGGCCGAGCTTCTCAAGGATCAGCAGGAGCAATCCCGTTCGCAATCGGAGCCCAGTGCCGACTTTCCGTCTCTCGCCGCCGCGGCTGCCACCAAGCCTAAGAAGAAGAAAGGTCAGTCCATTCCTCTCTCGGAGTTTCATACCTATGGTGGTCCTAAGCCGTCGGCTCAATCCAGTGAGCCGAAGGGTCTTACGACCGAAGATCTAATGATGCTTCCGACGGGTCCGCGTCAGCGAACGGAGGAGGAACTGGACCGCAATCGGCTCGGAGGTGGTTTCAAGAGTTGGGGTCAGAATAGTTTGTATGACAGGGGGAATCGGTATTCTAATGGTGAAGATTCGTCGAATGCTCGACGCGGTTCTAGGGTTTTTGATGAGTCGAGGAGGAGTGGTGATGGATCCGATAGGGAGTTTGGAAGGGAGTCGTTGCCTTCTAGGGCTGATGAGATTGATGATTGGGGCGCTGGGAAGAAGCCTATGATGGGCAATGGCTTTGAGAGGAGAGACAGAGGAGGAGGAGGAGGCTTTTTCGATTCGCATTCATCGAAAGCGGACGAATCGGATAGTTGGGTGTCGAATAAAAGCTTTTCACCTTCTGATGGTCGGAGATCAGGCGGTAGAGGTGGTGGATTTGAGAGAGAGCGAAGAGTAGGCTTTCCCTCGAACGGTGGTGGCGCCGATTCAGACAATTGGGACCGAAAATCTGAAGGTTCCAGGGGTAGAATTGGTGAGAATGGTGGTGGGGCTGATTCAGATAGCTGGGGAAAAAGATCTGAAGCAGCCAGAGGTGGAATTAGTGAGCGGCCGAGGCTTAATCTACAGCCTCGTTCACTCCCTTTGAACAATGGGAATCAGGAGGCTTCTGGTGCCGCAGTGAAGCTAAAGGCTTCCAATCCTTTTGGAAATGCTAGACCAAGGGAACAAGTATTGGCTGACAAGGGACAGGACTGGAAGAAAATTGATGAGAAGCTCGAGTCAATGAAAATTAAGGACACGGTTGTGAGAGCTGAGAGATCTAGTGGGGCTTCCTTCGAGAGAAAAGGCTTTGGAAGTCGAAATGCTTGGTCTCCCCAAGATCGTTCAGGGAGCGCATGGAGGAGGTCAGAATCTGTGGAGTCTCGTCCCCAGAGGTTTGCATTATACTTTAAACTTTTTCTGCTTTGATTATATACGTATACTCTTGGCTGCCCTTTTGGGATATTGTTTAATTTGCTTCTTTCTTCTAGGATTCTTGTAGATTTAGTTCATGGTTTTAAGAGAAATCTTGGGCAAACTGAATAAGCAACTATGGAAATTAACTCAAGTTCTTGCATTTTGTACTAGATGATGATGATAAGTATTGTTTGAAAGTGAAGATAGCTGTGGCAACTTCAATTTTTTTGTCTAAATGATAGTTTTAGTGGCTTTTTGTTATCATTTGGATCAGAATGGGAAACTACTGTTCATATGACTTGCTTTCCAAGGATGCTTGTTTTGTTCATTCAAATTTGTTTGATCTTGAACTAGAAGTTATTGACCATATTAAATTCTGCTGGAACTTGGAAGCCTTTTCTTTTGGCAATTGAGATGTAATCATGTTCCTTTTGTAGTTTGTCTTTCTATGATAAGATTGGAGGGTGAGATCTTTAATTCTAGTTTCTTTTAAGCCTTTTTTGTGTAATTATCTTCTTGCATGTTGTTGAATCAATCATTTGATTCTGTGTTGCAGTGCTGAGGCGGTTGATGTTGGACCTGCTGAGGAAAACTGAAGAAGACGGTATTATAAGCAATTGATTGATACTGAAGTTGAAATAATTAAATTGCTGATGAAATTTTCTGATATTCATTATTGAAGGCTCTTGAATTATTCACTGTGTTCTTCCATGTGTTCTTCCCCCCACCCCCCTCCACAAAAAAGAAAAAAAAAACAAAAAAACAAAAAAGAAGTATACATATAAAATTTTGTTTCTGTGAGTGTTATTGATGGGGATCAAAGTACAGGACATTGTGCAATTTTGGTAGGGTTAAGGTAGCTTGGCTAGGCCATTTATGGATTCATTTGTACCTCTTGTTGATGATGTTCCTCAGAAATATTGTTCAAACTGTACTGTTGTTGTCACTGAAATCAGTATTGTGTTCTGTTGAGAAATTCCTATGAGTTTGATTGTGTTTGTGACCTGAATTATTGTCTGATCGAATTATGATTTGTTCATTATTGTTCAACTGTACAAATGATTGCCTAGGTTCTTATTTTAGTTCATTATTGTCTGAAAGTTGATTGTTTGCTGAATTGGAAACAGTGGTGCTCTTCTCTCTCTCACTATTAAGGCTGTGAGGGCGAGATCCCATATTAATTGGAGAGGAAAATGAGTACTAGTAAAGACGTTGGGCTCTAAAAAGGGTGGATTGTGAGATTTCACGTCGGTGGTTGGAGAAGGAGGGGAACGAAGTATTCTTTAAGGGTGTGAAAACCTTTTTCTAGCCGACCGTTTTAAAAGCTTTGTGGGGAAATCCGAAATGAAAAAAATTCAAGAGGGTGTGAAAGAAGACCATTTTAAAAGCCTTGAAGAGAAACCCAAAAAAAAAAAAAAAATTAAAAAAATGGATAAGATTGAACTGTTGATTCGATTTAGTATATACTT

mRNA sequence

AAGGGCGTTTATTACCGCTTATTCTCTCTGCTCCCCACCGTAACCCATTTACTCAAGAAACCGCAGCGGAGACGAAGAATCCCACGCGATTACTCACAGCGAAGGCATGGCGGCTACTATGTCACCGTGGGGCAAGCCTGGAGCTTGGGCTCTGGATGCGGAGGAGCATGAGGCCGAGCTTCTCAAGGATCAGCAGGAGCAATCCCGTTCGCAATCGGAGCCCAGTGCCGACTTTCCGTCTCTCGCCGCCGCGGCTGCCACCAAGCCTAAGAAGAAGAAAGGTCAGTCCATTCCTCTCTCGGAGTTTCATACCTATGGTGGTCCTAAGCCGTCGGCTCAATCCAGTGAGCCGAAGGGTCTTACGACCGAAGATCTAATGATGCTTCCGACGGGTCCGCGTCAGCGAACGGAGGAGGAACTGGACCGCAATCGGCTCGGAGGTGGTTTCAAGAGTTGGGGTCAGAATAGTTTGTATGACAGGGGGAATCGGTATTCTAATGGTGAAGATTCGTCGAATGCTCGACGCGGTTCTAGGGTTTTTGATGAGTCGAGGAGGAGTGGTGATGGATCCGATAGGGAGTTTGGAAGGGAGTCGTTGCCTTCTAGGGCTGATGAGATTGATGATTGGGGCGCTGGGAAGAAGCCTATGATGGGCAATGGCTTTGAGAGGAGAGACAGAGGAGGAGGAGGAGGCTTTTTCGATTCGCATTCATCGAAAGCGGACGAATCGGATAGTTGGGTGTCGAATAAAAGCTTTTCACCTTCTGATGGTCGGAGATCAGGCGGTAGAGGTGGTGGATTTGAGAGAGAGCGAAGAGTAGGCTTTCCCTCGAACGGTGGTGGCGCCGATTCAGACAATTGGGACCGAAAATCTGAAGGTTCCAGGGGTAGAATTGGTGAGAATGGTGGTGGGGCTGATTCAGATAGCTGGGGAAAAAGATCTGAAGCAGCCAGAGGTGGAATTAGTGAGCGGCCGAGGCTTAATCTACAGCCTCGTTCACTCCCTTTGAACAATGGGAATCAGGAGGCTTCTGGTGCCGCAGTGAAGCTAAAGGCTTCCAATCCTTTTGGAAATGCTAGACCAAGGGAACAAGTATTGGCTGACAAGGGACAGGACTGGAAGAAAATTGATGAGAAGCTCGAGTCAATGAAAATTAAGGACACGGTTGTGAGAGCTGAGAGATCTAGTGGGGCTTCCTTCGAGAGAAAAGGCTTTGGAAGTCGAAATGCTTGGTCTCCCCAAGATCGTTCAGGGAGCGCATGGAGGAGGTCAGAATCTGTGGAGTCTCGTCCCCAGAGTGCTGAGGCGGTTGATGTTGGACCTGCTGAGGAAAACTGAAGAAGACGGTATTATAAGCAATTGATTGATACTGAAGTTGAAATAATTAAATTGCTGATGAAATTTTCTGATATTCATTATTGAAGGCTCTTGAATTATTCACTGTGTTCTTCCATGTGTTCTTCCCCCCACCCCCCTCCACAAAAAAGAAAAAAAAAACAAAAAAACAAAAAAGAAGTATACATATAAAATTTTGTTTCTGTGAGTGTTATTGATGGGGATCAAAGTACAGGACATTGTGCAATTTTGGTAGGGTTAAGGTAGCTTGGCTAGGCCATTTATGGATTCATTTGTACCTCTTGTTGATGATGTTCCTCAGAAATATTGTTCAAACTGTACTGTTGTTGTCACTGAAATCAGTATTGTGTTCTGTTGAGAAATTCCTATGAGTTTGATTGTGTTTGTGACCTGAATTATTGTCTGATCGAATTATGATTTGTTCATTATTGTTCAACTGTACAAATGATTGCCTAGGTTCTTATTTTAGTTCATTATTGTCTGAAAGTTGATTGTTTGCTGAATTGGAAACAGTGGTGCTCTTCTCTCTCTCACTATTAAGGCTGTGAGGGCGAGATCCCATATTAATTGGAGAGGAAAATGAGTACTAGTAAAGACGTTGGGCTCTAAAAAGGGTGGATTGTGAGATTTCACGTCGGTGGTTGGAGAAGGAGGGGAACGAAGTATTCTTTAAGGGTGTGAAAACCTTTTTCTAGCCGACCGTTTTAAAAGCTTTGTGGGGAAATCCGAAATGAAAAAAATTCAAGAGGGTGTGAAAGAAGACCATTTTAAAAGCCTTGAAGAGAAACCCAAAAAAAAAAAAAAAATTAAAAAAATGGATAAGATTGAACTGTTGATTCGATTTAGTATATACTT

Coding sequence (CDS)

ATGGCGGCTACTATGTCACCGTGGGGCAAGCCTGGAGCTTGGGCTCTGGATGCGGAGGAGCATGAGGCCGAGCTTCTCAAGGATCAGCAGGAGCAATCCCGTTCGCAATCGGAGCCCAGTGCCGACTTTCCGTCTCTCGCCGCCGCGGCTGCCACCAAGCCTAAGAAGAAGAAAGGTCAGTCCATTCCTCTCTCGGAGTTTCATACCTATGGTGGTCCTAAGCCGTCGGCTCAATCCAGTGAGCCGAAGGGTCTTACGACCGAAGATCTAATGATGCTTCCGACGGGTCCGCGTCAGCGAACGGAGGAGGAACTGGACCGCAATCGGCTCGGAGGTGGTTTCAAGAGTTGGGGTCAGAATAGTTTGTATGACAGGGGGAATCGGTATTCTAATGGTGAAGATTCGTCGAATGCTCGACGCGGTTCTAGGGTTTTTGATGAGTCGAGGAGGAGTGGTGATGGATCCGATAGGGAGTTTGGAAGGGAGTCGTTGCCTTCTAGGGCTGATGAGATTGATGATTGGGGCGCTGGGAAGAAGCCTATGATGGGCAATGGCTTTGAGAGGAGAGACAGAGGAGGAGGAGGAGGCTTTTTCGATTCGCATTCATCGAAAGCGGACGAATCGGATAGTTGGGTGTCGAATAAAAGCTTTTCACCTTCTGATGGTCGGAGATCAGGCGGTAGAGGTGGTGGATTTGAGAGAGAGCGAAGAGTAGGCTTTCCCTCGAACGGTGGTGGCGCCGATTCAGACAATTGGGACCGAAAATCTGAAGGTTCCAGGGGTAGAATTGGTGAGAATGGTGGTGGGGCTGATTCAGATAGCTGGGGAAAAAGATCTGAAGCAGCCAGAGGTGGAATTAGTGAGCGGCCGAGGCTTAATCTACAGCCTCGTTCACTCCCTTTGAACAATGGGAATCAGGAGGCTTCTGGTGCCGCAGTGAAGCTAAAGGCTTCCAATCCTTTTGGAAATGCTAGACCAAGGGAACAAGTATTGGCTGACAAGGGACAGGACTGGAAGAAAATTGATGAGAAGCTCGAGTCAATGAAAATTAAGGACACGGTTGTGAGAGCTGAGAGATCTAGTGGGGCTTCCTTCGAGAGAAAAGGCTTTGGAAGTCGAAATGCTTGGTCTCCCCAAGATCGTTCAGGGAGCGCATGGAGGAGGTCAGAATCTGTGGAGTCTCGTCCCCAGAGTGCTGAGGCGGTTGATGTTGGACCTGCTGAGGAAAACTGA

Protein sequence

MAATMSPWGKPGAWALDAEEHEAELLKDQQEQSRSQSEPSADFPSLAAAAATKPKKKKGQSIPLSEFHTYGGPKPSAQSSEPKGLTTEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQNSLYDRGNRYSNGEDSSNARRGSRVFDESRRSGDGSDREFGRESLPSRADEIDDWGAGKKPMMGNGFERRDRGGGGGFFDSHSSKADESDSWVSNKSFSPSDGRRSGGRGGGFERERRVGFPSNGGGADSDNWDRKSEGSRGRIGENGGGADSDSWGKRSEAARGGISERPRLNLQPRSLPLNNGNQEASGAAVKLKASNPFGNARPREQVLADKGQDWKKIDEKLESMKIKDTVVRAERSSGASFERKGFGSRNAWSPQDRSGSAWRRSESVESRPQSAEAVDVGPAEEN

Homology

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BLAST of Cp4.1LG05g13070.1 vs. Swiss-Prot
Match: IF4B3_ARATH (Eukaryotic translation initiation factor 4B3 OS=Arabidopsis thaliana GN=EIF4B3 PE=1 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 1.0e-77
Identity = 210/429 (48.95%), Postives = 265/429 (61.77%), Query Frame = 1


Query: 2   AATMSPWGKPGAWALDAEEHEAELLKDQQEQS-RSQSEPSADFPSLAAAAATKPKKKKGQ 61
           AA  S W KPGAWAL+AEEHEAEL +     + +S +E S+DFPSLAAAA TK KKKKGQ
Sbjct: 3   AAVSSVWAKPGAWALEAEEHEAELKQQPSPTNQKSSAEDSSDFPSLAAAATTKTKKKKGQ 62

Query: 62  SIPLSEFHTYGGPKPSAQSSEPKGLTTEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQN 121
           +I L+EF TYG  K +  + + + LT  +L+ LPTGPR+R+ EELDR++LGGGF+S+G  
Sbjct: 63  TISLAEFATYGTAK-AKPAPQTERLTQAELVALPTGPRERSAEELDRSKLGGGFRSYG-- 122

Query: 122 SLYDRGNRYSNGEDSSNARRGS-RVFDESRRSGDG--SDREFGRESLPSRADEIDDWGAG 181
                G RY  G++SS++R GS RV ++  R G G   DRE  R+S PSRADE D+W A 
Sbjct: 123 -----GGRY--GDESSSSRWGSSRVSEDGERRGGGFNRDREPSRDSGPSRADEDDNWAAA 182

Query: 182 KKPMMGNGFERRDRGGGGGFFDSHS-SKADESDSWVSNKSFSPSDGRR--SGGRGGGFER 241
           KKP+ GNGFERR+RG GGGFF+S S SKADE DSWVS K   PS+ RR  S   GGG   
Sbjct: 183 KKPISGNGFERRERGSGGGFFESQSQSKADEVDSWVSTK---PSEPRRFVSSNGGGGDRF 242

Query: 242 ERRVGFPSNGGGADSDNWDRKSEGSRGRIGENGGGADSDSWGKRSE---AARGGI----S 301
           E+R  F S     DS                 GGG++SD+WG+R E   AA G       
Sbjct: 243 EKRGSFESLSRNRDSQYG-------------GGGGSESDTWGRRREESGAANGSPPPSGG 302

Query: 302 ERPRLNLQPRSLPLNNGNQEASGAAV-----KLKASNPFGNARPREQVLADKGQDWKKID 361
            RPRL LQPR+LP+         + V     K K +NPFGNARPRE+VLA+KGQDWK+ID
Sbjct: 303 SRPRLVLQPRTLPVAVVEVVKPESPVLVIVEKPKGANPFGNARPREEVLAEKGQDWKEID 362

Query: 362 EKLESMKIKDTVVRAERSSGASFERKGFGSRNAWSPQDRSGSAWRRS--ESVESRPQSAE 410
           EKLE+ K+KD     E+ +  S  + GFG  N    ++R   +WR+S   S E   +   
Sbjct: 363 EKLEAEKLKDIAAAMEKPNEKSTGKMGFGLGNGRKDEERIERSWRKSTEHSEEDAQEEEP 405

[Close]

BLAST of Cp4.1LG05g13070.1 vs. Swiss-Prot
Match: IF4B1_WHEAT (Eukaryotic translation initiation factor 4B1 OS=Triticum aestivum GN=EIF4B PE=1 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 2.9e-35
Identity = 138/380 (36.32%), Postives = 189/380 (49.74%), Query Frame = 1


Query: 7   PWGKPGAWALDAEEHEAELLKDQQEQSRSQSEPSADFPSLAAAAATKP------------ 66
           PWG  GAWALDAE       ++ +E+  + + P+ D P+ A  AA+ P            
Sbjct: 4   PWGGVGAWALDAE-------REDEEREHAAAFPAPDPPAAAGGAASFPSLKEAVVAGGGK 63

Query: 67  -KKKKGQSIPLSEFHTYG--GPKPSAQSSEPKGLTTEDLMMLPTGPRQRTEEELDRNRLG 126
            KKKKG ++ LSEF TYG  G       +EPKGLT +++MMLPTGPR+R+E+ELDR+R  
Sbjct: 64  QKKKKGTTLSLSEFTTYGAAGAPRRVAPAEPKGLTPQEMMMLPTGPRERSEDELDRSR-- 123

Query: 127 GGFKSWGQNSLYDRGNRYSNGEDSSNARRGSRVFDESRRSGDGSDREFGRESLPSRADEI 186
            GF+S+G       G+R   G            FD+ RRS   SD +     +PSRADE 
Sbjct: 124 -GFRSYG-------GDREPRGGG----------FDDDRRSSRDSDLD-----MPSRADES 183

Query: 187 DDWGAGKK-PMMGNGFERRDRGGGGGFFDSHSSKADESDSWVSNKSFSPSDGRRSGGRGG 246
           D+WG  K          RRDR  G     S   ++D+ D+W  +K   PS    S G GG
Sbjct: 184 DNWGKNKSFSPAPTDSGRRDRLSG----PSPLGRSDDIDNWSRDKKPLPS-RYPSLGTGG 243

Query: 247 GFERERRVGFPSNGGGADSDNWDRKSEGSRGRIGENGGGADSDSWGKRS-EAARGGISER 306
           GF      GF  + GG          E S G   ++ G +DSD W + +  A      +R
Sbjct: 244 GFRESSGGGFRESSGGG-------FRESSGGGFRDSPGPSDSDRWVRGAVPAPMTNNGDR 303

Query: 307 PRLNLQPRSLPLNNGNQEASGAAVKLKASNPFGNARPREQVLADKGQDWKKIDEKLESMK 366
           PRLNL P     +        A V     +PFG A+PRE+VLA+KG DW+K++ ++E   
Sbjct: 304 PRLNLNPPK--RDPSATPVPAAEVARSRPSPFGAAKPREEVLAEKGLDWRKMEGEIEKKT 337

Query: 367 IKDTVVRAERSSGASFERKG 370
            + T   + R + A   R G
Sbjct: 364 SRPTSSHSSRPNSAHSSRPG 337

[Close]

BLAST of Cp4.1LG05g13070.1 vs. Swiss-Prot
Match: IF4B2_ARATH (Eukaryotic translation initiation factor 4B2 OS=Arabidopsis thaliana GN=EIF4B2 PE=1 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 1.1e-29
Identity = 146/419 (34.84%), Postives = 188/419 (44.87%), Query Frame = 1


Query: 7   PWGKPGAWALDAEEHEAELLKDQQEQSRSQSEPSADFPSLAAAAATKPKKKKGQSIPLSE 66
           PWG  GAWA +AE  + E    Q  ++ + +  S  FPSL  AA  K  KKK + + LSE
Sbjct: 4   PWGGIGAWADEAERADEE----QAAEATATAADSQSFPSLKEAATAKSSKKK-KKMTLSE 63

Query: 67  FHTYGGPKPSAQSSEPKGLTTEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQNSLYDRG 126
           F       PS+      GLT E ++ LPTGPRQR+E+E+   RLGGGF S+G        
Sbjct: 64  FTKGAYTAPSSA-----GLTREQMLQLPTGPRQRSEDEMQPGRLGGGFSSYGGGRSSGPP 123

Query: 127 NRYSNGEDSSNA--------RRGSRVFDESRRSGDGSDREFGRESLPSRADEIDDWGAGK 186
            R S   + S+         RR    FD+ +R   GS+         SRADE DDWG GK
Sbjct: 124 GRMSRDREDSDGSWGGGGGGRRSYGGFDDDQR---GSNSRVSDFPQVSRADEDDDWGKGK 183

Query: 187 K--PMMGNGFERRDRGGGGGFFDSHSSKADESDSWVSNKSFSPSDGRRSGGRGGGFERER 246
           K  P    G +    GGGGG                   SF    G  +G  GGG     
Sbjct: 184 KSLPSFDQGRQGSRYGGGGG-------------------SFGGGGGGGAGSYGGG----- 243

Query: 247 RVGFPSNGGGADS-----DNWDR-KSEGSRGRIGENGGGADSDSWGKRSEAARGGI-SER 306
             G  S GGG  S     DNW   K++ S    G    G + D W +    + GG+  ER
Sbjct: 244 GAGAGSGGGGGFSKADEVDNWAAGKAKSSTFGSGFRESGPEPDRWARGVLPSGGGVQEER 303

Query: 307 PRLNLQPRSLPLNNGNQEASGAAVKLKASNPFGNARPREQVLADKGQDWKKIDEKLESMK 366
            RL  +PR     +     +  AVK    +PFG ARPREQVLA+KG DWKK+D  +E+ K
Sbjct: 304 RRLVFEPRKA---DTEVSETPTAVKTSKPSPFGAARPREQVLAEKGLDWKKLDSDIEAKK 363

Query: 367 IKDTVVRAERSSGASFERKGFGSRNAWSPQDRSGSAWRRSESVESRPQSAEAVDVGPAE 409
                 +  R S A   R      +A S +  S +       V+ RP+     D  P E
Sbjct: 364 -----GQTSRPSSAQSSRPS----SAQSNRSESSALNNVENVVKPRPKVNPFGDAKPRE 373

[Close]

BLAST of Cp4.1LG05g13070.1 vs. Swiss-Prot
Match: IF4B1_ARATH (Eukaryotic translation initiation factor 4B1 OS=Arabidopsis thaliana GN=EIF4B1 PE=1 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.7e-24
Identity = 127/380 (33.42%), Postives = 181/380 (47.63%), Query Frame = 1


Query: 12  GAWALDAEEHEAELLKDQQEQSRSQSEPSADFPSL---AAAAATKPKKKKGQSIPLSEFH 71
           GAWA +AE  + E    Q  ++ + +  +  FPSL   AAA AT  K +K + + LSEF 
Sbjct: 11  GAWADEAERADEE----QAAEATAATADTQSFPSLREAAAATATSGKSRKMKKMSLSEFT 70

Query: 72  TYGGPKPSAQSSEPKGLTTEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQNS------- 131
           T     P  ++S   GLT ++++ LPTGPRQR+EEE+   RLGGGF S+G  S       
Sbjct: 71  TGAYTAPGGRNSV--GLTQQEILQLPTGPRQRSEEEMQPGRLGGGFSSYGGRSGGRIGRD 130

Query: 132 LYDRGNRYSNGEDSSNARRGSRVFDESRRSGDGSDREFGRESLPSRADEIDDWGAGKKPM 191
             D    +S G      R     FD+ RR       +F +   PSRADE+DDWG  KKP+
Sbjct: 131 RDDSDGSWSGGGGGGGRRPYGGGFDDDRRGNQSRVSDFPQ---PSRADEVDDWGKEKKPL 190

Query: 192 --MGNGFERRDRGGGGGFFDSHS-------------SKADESDSWVSNKSFSP---SDGR 251
                G + R  G GGGF    S             S+AD+ D+W + K  +P   S   
Sbjct: 191 PSFDQGRQGRYSGDGGGFGGGGSGFGGGGGGGGGGLSRADDVDNWGAGKRQAPVRSSTFG 250

Query: 252 RSGGRGGGFERERRVGFPS--NGGGADS----DNWDRKSEGSRGRIGENGGGADSDSWGK 311
            S G  G  ER R V  P     GG+++    +   + +     R  E+        W K
Sbjct: 251 SSFGDSGQEERRRLVLEPRKVESGGSETPPVVEKTSKPNPFGAARPREDVLAEKGLDWKK 310

Query: 312 ---RSEAARGGI-SERPRLNLQPRSLPLNNGNQEASGAAVKLKAS---NPFGNARPREQV 351
                EA +G   + RP      R     +   E+SG    +K     NPFG+A+PRE +
Sbjct: 311 IDSEIEAKKGSSQTSRPTSAHSSRPSSAQSNRSESSGLNNVVKPRPKVNPFGDAKPREVL 370

[Close]

BLAST of Cp4.1LG05g13070.1 vs. TrEMBL
Match: A0A0A0LJC8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G263980 PE=4 SV=1)

HSP 1 Score: 654.1 bits (1686), Expect = 1.2e-184
Identity = 345/411 (83.94%), Postives = 372/411 (90.51%), Query Frame = 1


Query: 1   MAATMSPWGKPGAWALDAEEHEAELLKDQQEQSRSQSEPSADFPSLAAAAATKPKKKKGQ 60
           MAAT+SPWGKPGAWALDAEEHEAELLKDQ+EQSR Q EPSADFPSLAAAAATKPKKKKGQ
Sbjct: 1   MAATVSPWGKPGAWALDAEEHEAELLKDQEEQSRHQEEPSADFPSLAAAAATKPKKKKGQ 60

Query: 61  SIPLSEFHTYGGPKPSAQSSEPKGLTTEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQN 120
           SIPLSEF TYGGPKPSAQSS+PKGLT EDLMMLPTGPRQRT EE+DRNRLGGGFKSWGQN
Sbjct: 61  SIPLSEFQTYGGPKPSAQSSDPKGLTAEDLMMLPTGPRQRTAEEMDRNRLGGGFKSWGQN 120

Query: 121 SLYDRGNRYSNGEDSSNARRGSRVFDESRRSGDGSDREFGRESLPSRADEIDDWGAGKKP 180
           SLYDRGNRYSN EDS N+RR SRVFDESRR+ DGSDREF RESLPSRADEIDDWGAGKKP
Sbjct: 121 SLYDRGNRYSNSEDSPNSRRSSRVFDESRRTNDGSDREFRRESLPSRADEIDDWGAGKKP 180

Query: 181 MMGNGFERRDRGGGGGFFDSHSSKADESDSWVSNKSFSPSDGRRSGGRGGGFERERRVGF 240
           M+GNGFERR+RGGGGGFFDSHSSKADESDSWVS+KSF+PS+GRRS    GGF+RERR GF
Sbjct: 181 MVGNGFERRERGGGGGFFDSHSSKADESDSWVSSKSFTPSEGRRS----GGFDRERRGGF 240

Query: 241 PSNGGGADSDNWDRKSEGSRGRIGENGGGADSDSWGKRSEAARGGISERPRLNLQPRSLP 300
           P++GGGADSDNW RK +G+RG IGENGG ADS++WGKRSE  R GI ERPRLNLQPRS+P
Sbjct: 241 PTSGGGADSDNWGRKPDGARGGIGENGGSADSENWGKRSEGVRSGIGERPRLNLQPRSIP 300

Query: 301 LNNGNQEASGAAVKLKASNPFGNARPREQVLADKGQDWKKIDEKLESMKIKDTVVRAERS 360
           LNNGNQEASG AVK K SNPFGNARPRE+VLA+KGQDWKKIDE+LES+KIKDTV RAE S
Sbjct: 301 LNNGNQEASGVAVKPKGSNPFGNARPREEVLAEKGQDWKKIDEQLESVKIKDTVERAETS 360

Query: 361 SGASFER-KGFGSRNAWSPQDRSGSAWRRSESVESRPQSAEAVDVGPAEEN 411
           SGASFER KGFG+R+  SP   SG  WR+ ESVESRPQSAE V+ GPAEEN
Sbjct: 361 SGASFERKKGFGARSGRSPD--SGRTWRKPESVESRPQSAELVEDGPAEEN 405

[Close]

BLAST of Cp4.1LG05g13070.1 vs. TrEMBL
Match: E5GC13_CUCME (Translation initiation factor OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 651.4 bits (1679), Expect = 7.5e-184
Identity = 343/411 (83.45%), Postives = 372/411 (90.51%), Query Frame = 1


Query: 1   MAATMSPWGKPGAWALDAEEHEAELLKDQQEQSRSQSEPSADFPSLAAAAATKPKKKKGQ 60
           MAAT+SPWGKPGAWALDAEEHEAELLKDQQ+QSR QSEPSADFPSLAAAAATKPKKKKGQ
Sbjct: 1   MAATVSPWGKPGAWALDAEEHEAELLKDQQDQSRHQSEPSADFPSLAAAAATKPKKKKGQ 60

Query: 61  SIPLSEFHTYGGPKPSAQSSEPKGLTTEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQN 120
           SIPLSEF TYGGP+P+AQS++PKGLT EDLMMLPTGPRQRT EE+DRNRLGGGFKSWGQN
Sbjct: 61  SIPLSEFQTYGGPRPAAQSTDPKGLTAEDLMMLPTGPRQRTAEEMDRNRLGGGFKSWGQN 120

Query: 121 SLYDRGNRYSNGEDSSNARRGSRVFDESRRSGDGSDREFGRESLPSRADEIDDWGAGKKP 180
           SLYDRGNRYSN EDS N+RR SRVFDESRRS DGSDREF RESLPSRADEIDDWGAGKKP
Sbjct: 121 SLYDRGNRYSNSEDSPNSRRSSRVFDESRRSNDGSDREFRRESLPSRADEIDDWGAGKKP 180

Query: 181 MMGNGFERRDRGGGGGFFDSHSSKADESDSWVSNKSFSPSDGRRSGGRGGGFERERRVGF 240
           MMGNGFERR+RGGGGGFFDSHSSKADESDSWVS+KSF+PS+GRRS    GGF+RERR GF
Sbjct: 181 MMGNGFERRERGGGGGFFDSHSSKADESDSWVSSKSFTPSEGRRS----GGFDRERRGGF 240

Query: 241 PSNGGGADSDNWDRKSEGSRGRIGENGGGADSDSWGKRSEAARGGISERPRLNLQPRSLP 300
           P++GGGADSDNW RKS+G+R  +GENGGGADSD+WGK+SE  R GI ERPRLNLQPRS+P
Sbjct: 241 PTSGGGADSDNWGRKSDGARAGMGENGGGADSDNWGKKSEGVRSGIGERPRLNLQPRSIP 300

Query: 301 LNNGNQEASGAAVKLKASNPFGNARPREQVLADKGQDWKKIDEKLESMKIKDTVVRAERS 360
           LNNGNQEASG AVK K SNPFGNARPRE+VLA+KGQDWKKIDE+L SMKIKDTV RAE S
Sbjct: 301 LNNGNQEASGVAVKPKGSNPFGNARPREEVLAEKGQDWKKIDEQLGSMKIKDTVERAETS 360

Query: 361 SGASFE-RKGFGSRNAWSPQDRSGSAWRRSESVESRPQSAEAVDVGPAEEN 411
           SGASFE RKGFG R+  SP   SG +WR+ ES +SRPQSAE V+ GPAEEN
Sbjct: 361 SGASFERRKGFGVRSGRSPD--SGRSWRKPESADSRPQSAELVEDGPAEEN 405

[Close]

BLAST of Cp4.1LG05g13070.1 vs. TrEMBL
Match: F6I126_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0038g01950 PE=4 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 8.0e-101
Identity = 236/420 (56.19%), Postives = 284/420 (67.62%), Query Frame = 1


Query: 1   MAATMSPWGKPGAWALDAEEHEAELLKDQQE----------QSRSQSEPSADFPSLAAAA 60
           MAAT+SPWGK GAWALD+EEHE ELL+ Q++          + R   E SADFP+LA AA
Sbjct: 1   MAATVSPWGKAGAWALDSEEHEDELLQQQRDDKVNGEFSGGEGRQAPEASADFPTLATAA 60

Query: 61  ATKPKKKKGQSIPLSEFHTYGGPKPSAQSSEPKGLTTEDLMMLPTGPRQRTEEELDRNRL 120
           ATK KKKKGQ++ LSEF  +G  K SAQ S+ KGLT EDLMMLPTGPRQR+ EELDR RL
Sbjct: 61  ATKSKKKKGQTLSLSEFSAFGAGK-SAQPSQTKGLTHEDLMMLPTGPRQRSAEELDRGRL 120

Query: 121 GGGFKSWGQNSLYDRG-NRYSNGEDSSNARRGSRVFDESRRSGDGSDREFGRESLPSRAD 180
           GGGF+S+G N  Y+ G +RY  GEDS+N R G R  +E R+ G G  R+  RE  PSRAD
Sbjct: 121 GGGFRSYGSNGSYEGGRSRYGGGEDSANPRWGPRGSEERRQGGFG--RDSSRELAPSRAD 180

Query: 181 EIDDWGAGKKPMMGNGFERRDRGGGGGFFDSHSSKADESDSWVSNKSFSPSDGRRSGGRG 240
           EIDDWGA KK  +GNGFERRDRGG   FFDS S +ADES SWVSNKSF+PS+GRR GG G
Sbjct: 181 EIDDWGAAKKSTVGNGFERRDRGG---FFDSQS-RADESASWVSNKSFTPSEGRRFGG-G 240

Query: 241 GGFE--RERRVGFPSNGGGADSDNWDRKSEGSRGRIGENGGGADSDSWGKRSEA----AR 300
           GGFE  RERR GF S   G                    GGGADS+SWG++ E     A 
Sbjct: 241 GGFESLRERRGGFDSASDG--------------------GGGADSESWGRKKEEGSGNAN 300

Query: 301 GGISERPRLNLQPRSLPLNNGNQEASGAAVKLKASNPFGNARPREQVLADKGQDWKKIDE 360
           G    RP+L LQPR++P+N+G Q  SG+  K K  NPFG ARPRE+VLA+KGQDWK+I+E
Sbjct: 301 GSAGSRPKLILQPRTVPVNDGQQPGSGSVAKPKGPNPFGEARPREEVLAEKGQDWKEIEE 360

Query: 361 KLESMKIKDT-VVRAERSSGASFERKGFGSRNAWS--PQDRSGSAWRRSESVESRPQSAE 401
           KLES+K+KD       ++ G SF ++ FGS NA +  P+ RS  +WR+ ES + R    E
Sbjct: 361 KLESVKLKDVGSPGVGQTDGPSFGKRSFGSGNARASLPESRSEKSWRKPESEDVRAAKTE 392

[Close]

BLAST of Cp4.1LG05g13070.1 vs. TrEMBL
Match: A5BQN4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_029831 PE=4 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 3.0e-100
Identity = 234/415 (56.39%), Postives = 282/415 (67.95%), Query Frame = 1


Query: 1   MAATMSPWGKPGAWALDAEEHEAELLKDQQE----------QSRSQSEPSADFPSLAAAA 60
           MAAT+SPWGK GAWALD+EEHE ELL+ Q++          + R   E SADFP+LA AA
Sbjct: 1   MAATVSPWGKAGAWALDSEEHEDELLQQQRDDKVNGEFSGGEGRQAPEASADFPTLATAA 60

Query: 61  ATKPKKKKGQSIPLSEFHTYGGPKPSAQSSEPKGLTTEDLMMLPTGPRQRTEEELDRNRL 120
           ATK KKKKGQ++ LSEF  +G  K SAQ S+ KGLT EDLMMLPTGPRQR+ EELDR RL
Sbjct: 61  ATKSKKKKGQTLSLSEFSAFGAGK-SAQPSQTKGLTHEDLMMLPTGPRQRSAEELDRGRL 120

Query: 121 GGGFKSWGQNSLYDRG-NRYSNGEDSSNARRGSRVFDESRRSGDGSDREFGRESLPSRAD 180
           GGGF+S+G N  Y+ G +RY  GEDS+N R G R  +E R+ G G  R+  RE  PSRAD
Sbjct: 121 GGGFRSYGSNGSYEGGRSRYGGGEDSANPRWGPRGSEERRQGGFG--RDSSRELAPSRAD 180

Query: 181 EIDDWGAGKKPMMGNGFERRDRGGGGGFFDSHSSKADESDSWVSNKSFSPSDGRRSGGRG 240
           EIDDWGA KK  +GNGFERRDRGG   FFDS S +ADES SWVSNKSF+PS+GRR GG G
Sbjct: 181 EIDDWGAAKKSTVGNGFERRDRGG---FFDSQS-RADESASWVSNKSFTPSEGRRFGG-G 240

Query: 241 GGFE--RERRVGFPSNGGGADSDNWDRKSEGSRGRIGENGGGADSDSWGKRSEA----AR 300
           GGFE  RERR GF S   G                    GGGADS+SWG++ E     A 
Sbjct: 241 GGFESLRERRGGFDSASDG--------------------GGGADSESWGRKKEEGSGNAN 300

Query: 301 GGISERPRLNLQPRSLPLNNGNQEASGAAVKLKASNPFGNARPREQVLADKGQDWKKIDE 360
           G    RP+L LQPR++P+N+G Q  SG+  K K  NPFG ARPRE+VLA+KGQDWK+I+E
Sbjct: 301 GSAGSRPKLILQPRTVPVNDGQQPGSGSVAKPKGPNPFGEARPREEVLAEKGQDWKEIEE 360

Query: 361 KLESMKIKDT-VVRAERSSGASFERKGFGSRNAWS--PQDRSGSAWRRSESVESR 396
           KLES+K+KD       ++ G SF ++ FGS NA +  P+ R   +WR+ ES + R
Sbjct: 361 KLESVKLKDVGSPGVGQTDGPSFGKRSFGSGNARASLPESRXEKSWRKPESEDVR 387

[Close]

BLAST of Cp4.1LG05g13070.1 vs. TrEMBL
Match: A0A0A0K4M1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G009760 PE=4 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 5.7e-91
Identity = 218/409 (53.30%), Postives = 277/409 (67.73%), Query Frame = 1


Query: 2   AATMSPWGKPGAWALDAEEHEAELLKDQQEQSRSQSEPSADFPSLAAAAATKPKKKKGQS 61
           A   SPWGKPGAWALD+EEH+A+LLK+Q++Q   Q E S DFPSL  A ATK +KKK Q+
Sbjct: 3   AMVSSPWGKPGAWALDSEEHDAQLLKEQEQQK--QPELSLDFPSLNDALATK-QKKKAQT 62

Query: 62  IPLSEFHTYGGPKPSAQSSEPKGLTTEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQNS 121
           + L+EF+TY             G  +ED ++LPTGPRQRT EELDRNRLGGGF+++G N 
Sbjct: 63  LSLAEFNTYA----------TTGSRSEDFIVLPTGPRQRTAEELDRNRLGGGFRNYGSNG 122

Query: 122 LYDRGNRYSNGEDSSNARRG-SRVFDESRRSGDGSDREFGRESLPSRADEIDDWGAGKKP 181
            Y+R +RYSN +DSSN++ G SRV DE+RRS + +D    +E   SRADE+D+W   KKP
Sbjct: 123 SYERNSRYSNADDSSNSKWGSSRVSDENRRSSNRADS--SKEFTSSRADEVDNWALTKKP 182

Query: 182 MMGNGFERRDRGGGGGFFDSHSSKADESDSWVSNKSFSPSDGRRSGGRGGGFERERRVGF 241
           M GNGFERR+R  G GF DS SSKADES+SWVSNKS  PSDGRR       F+RERR GF
Sbjct: 183 MAGNGFERRER--GLGFSDSQSSKADESESWVSNKSNIPSDGRR-------FDRERRGGF 242

Query: 242 PSNGGGADSDNWDRKSEGSRGRIGENGGGADSDSWGKRSEAARGGISERPRLNLQPRSLP 301
            ++GGGADSDNW RK E        N GG                IS RP+L+LQPR+LP
Sbjct: 243 TASGGGADSDNWGRKKEEG------NAGGV---------------ISSRPKLSLQPRTLP 302

Query: 302 LNNG-NQEASGAAVKLKASNPFGNARPREQVLADKGQDWKKIDEKLESMKIKDTVV--RA 361
           + +G + E S  A + K+SNPFG ARPRE+VLA+KG DWKK+DE+LES KIK+  V  + 
Sbjct: 303 VVDGKSSEISATAARSKSSNPFGAARPREEVLAEKGHDWKKLDEQLES-KIKEVSVEEKT 362

Query: 362 ERSSGASFERKGFGSRNAWSPQDRSGSAWRRSES------VESRPQSAE 401
           E+S+   F ++ FG+ N+ + +DR+  +WR+ ES       ESRP+S E
Sbjct: 363 EKSNPIFFRKRSFGNGNSRAAEDRTERSWRKPESPPPQEYPESRPESGE 365

[Close]

BLAST of Cp4.1LG05g13070.1 vs. TAIR10
Match: AT4G38710.2 (AT4G38710.2 glycine-rich protein)

HSP 1 Score: 293.5 bits (750), Expect = 2.0e-79
Identity = 206/412 (50.00%), Postives = 260/412 (63.11%), Query Frame = 1


Query: 2   AATMSPWGKPGAWALDAEEHEAELLKDQQEQS-RSQSEPSADFPSLAAAAATKPKKKKGQ 61
           AA  S W KPGAWAL+AEEHEAEL +     + +S +E S+DFPSLAAAA TK KKKKGQ
Sbjct: 3   AAVSSVWAKPGAWALEAEEHEAELKQQPSPTNQKSSAEDSSDFPSLAAAATTKTKKKKGQ 62

Query: 62  SIPLSEFHTYGGPKPSAQSSEPKGLTTEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQN 121
           +I L+EF TYG  K +  + + + LT  +L+ LPTGPR+R+ EELDR++LGGGF+S+G  
Sbjct: 63  TISLAEFATYGTAK-AKPAPQTERLTQAELVALPTGPRERSAEELDRSKLGGGFRSYG-- 122

Query: 122 SLYDRGNRYSNGEDSSNARRGS-RVFDESRRSGDG--SDREFGRESLPSRADEIDDWGAG 181
                G RY  G++SS++R GS RV ++  R G G   DRE  R+S PSRADE D+W A 
Sbjct: 123 -----GGRY--GDESSSSRWGSSRVSEDGERRGGGFNRDREPSRDSGPSRADEDDNWAAA 182

Query: 182 KKPMMGNGFERRDRGGGGGFFDSHS-SKADESDSWVSNKSFSPSDGRR--SGGRGGGFER 241
           KKP+ GNGFERR+RG GGGFF+S S SKADE DSWVS K   PS+ RR  S   GGG   
Sbjct: 183 KKPISGNGFERRERGSGGGFFESQSQSKADEVDSWVSTK---PSEPRRFVSSNGGGGDRF 242

Query: 242 ERRVGFPSNGGGADSDNWDRKSEGSRGRIGENGGGADSDSWGKRSE---AARGGI----S 301
           E+R  F S     DS                 GGG++SD+WG+R E   AA G       
Sbjct: 243 EKRGSFESLSRNRDSQYG-------------GGGGSESDTWGRRREESGAANGSPPPSGG 302

Query: 302 ERPRLNLQPRSLPLNNGNQEASGAAV-----KLKASNPFGNARPREQVLADKGQDWKKID 361
            RPRL LQPR+LP+         + V     K K +NPFGNARPRE+VLA+KGQDWK+ID
Sbjct: 303 SRPRLVLQPRTLPVAVVEVVKPESPVLVIVEKPKGANPFGNARPREEVLAEKGQDWKEID 362

Query: 362 EKLESMKIKDTVVRAERSSGASFERKGFGSRNAWSPQDRSGSAWRRSESVES 395
           EKLE+ K+KD     E+ +  S  + GFG  N    ++R   +WR+S S+ S
Sbjct: 363 EKLEAEKLKDIAAAMEKPNEKSTGKMGFGLGNGRKDEERIERSWRKSFSLHS 388

[Close]

BLAST of Cp4.1LG05g13070.1 vs. TAIR10
Match: AT1G13020.1 (AT1G13020.1 eukaryotic initiation factor 4B2)

HSP 1 Score: 132.5 bits (332), Expect = 5.9e-31
Identity = 146/419 (34.84%), Postives = 188/419 (44.87%), Query Frame = 1


Query: 7   PWGKPGAWALDAEEHEAELLKDQQEQSRSQSEPSADFPSLAAAAATKPKKKKGQSIPLSE 66
           PWG  GAWA +AE  + E    Q  ++ + +  S  FPSL  AA  K  KKK + + LSE
Sbjct: 4   PWGGIGAWADEAERADEE----QAAEATATAADSQSFPSLKEAATAKSSKKK-KKMTLSE 63

Query: 67  FHTYGGPKPSAQSSEPKGLTTEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQNSLYDRG 126
           F       PS+      GLT E ++ LPTGPRQR+E+E+   RLGGGF S+G        
Sbjct: 64  FTKGAYTAPSSA-----GLTREQMLQLPTGPRQRSEDEMQPGRLGGGFSSYGGGRSSGPP 123

Query: 127 NRYSNGEDSSNA--------RRGSRVFDESRRSGDGSDREFGRESLPSRADEIDDWGAGK 186
            R S   + S+         RR    FD+ +R   GS+         SRADE DDWG GK
Sbjct: 124 GRMSRDREDSDGSWGGGGGGRRSYGGFDDDQR---GSNSRVSDFPQVSRADEDDDWGKGK 183

Query: 187 K--PMMGNGFERRDRGGGGGFFDSHSSKADESDSWVSNKSFSPSDGRRSGGRGGGFERER 246
           K  P    G +    GGGGG                   SF    G  +G  GGG     
Sbjct: 184 KSLPSFDQGRQGSRYGGGGG-------------------SFGGGGGGGAGSYGGG----- 243

Query: 247 RVGFPSNGGGADS-----DNWDR-KSEGSRGRIGENGGGADSDSWGKRSEAARGGI-SER 306
             G  S GGG  S     DNW   K++ S    G    G + D W +    + GG+  ER
Sbjct: 244 GAGAGSGGGGGFSKADEVDNWAAGKAKSSTFGSGFRESGPEPDRWARGVLPSGGGVQEER 303

Query: 307 PRLNLQPRSLPLNNGNQEASGAAVKLKASNPFGNARPREQVLADKGQDWKKIDEKLESMK 366
            RL  +PR     +     +  AVK    +PFG ARPREQVLA+KG DWKK+D  +E+ K
Sbjct: 304 RRLVFEPRKA---DTEVSETPTAVKTSKPSPFGAARPREQVLAEKGLDWKKLDSDIEAKK 363

Query: 367 IKDTVVRAERSSGASFERKGFGSRNAWSPQDRSGSAWRRSESVESRPQSAEAVDVGPAE 409
                 +  R S A   R      +A S +  S +       V+ RP+     D  P E
Sbjct: 364 -----GQTSRPSSAQSSRPS----SAQSNRSESSALNNVENVVKPRPKVNPFGDAKPRE 373

[Close]

BLAST of Cp4.1LG05g13070.1 vs. TAIR10
Match: AT3G26400.1 (AT3G26400.1 eukaryotic translation initiation factor 4B1)

HSP 1 Score: 115.2 bits (287), Expect = 9.8e-26
Identity = 127/380 (33.42%), Postives = 181/380 (47.63%), Query Frame = 1


Query: 12  GAWALDAEEHEAELLKDQQEQSRSQSEPSADFPSL---AAAAATKPKKKKGQSIPLSEFH 71
           GAWA +AE  + E    Q  ++ + +  +  FPSL   AAA AT  K +K + + LSEF 
Sbjct: 11  GAWADEAERADEE----QAAEATAATADTQSFPSLREAAAATATSGKSRKMKKMSLSEFT 70

Query: 72  TYGGPKPSAQSSEPKGLTTEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQNS------- 131
           T     P  ++S   GLT ++++ LPTGPRQR+EEE+   RLGGGF S+G  S       
Sbjct: 71  TGAYTAPGGRNSV--GLTQQEILQLPTGPRQRSEEEMQPGRLGGGFSSYGGRSGGRIGRD 130

Query: 132 LYDRGNRYSNGEDSSNARRGSRVFDESRRSGDGSDREFGRESLPSRADEIDDWGAGKKPM 191
             D    +S G      R     FD+ RR       +F +   PSRADE+DDWG  KKP+
Sbjct: 131 RDDSDGSWSGGGGGGGRRPYGGGFDDDRRGNQSRVSDFPQ---PSRADEVDDWGKEKKPL 190

Query: 192 --MGNGFERRDRGGGGGFFDSHS-------------SKADESDSWVSNKSFSP---SDGR 251
                G + R  G GGGF    S             S+AD+ D+W + K  +P   S   
Sbjct: 191 PSFDQGRQGRYSGDGGGFGGGGSGFGGGGGGGGGGLSRADDVDNWGAGKRQAPVRSSTFG 250

Query: 252 RSGGRGGGFERERRVGFPS--NGGGADS----DNWDRKSEGSRGRIGENGGGADSDSWGK 311
            S G  G  ER R V  P     GG+++    +   + +     R  E+        W K
Sbjct: 251 SSFGDSGQEERRRLVLEPRKVESGGSETPPVVEKTSKPNPFGAARPREDVLAEKGLDWKK 310

Query: 312 ---RSEAARGGI-SERPRLNLQPRSLPLNNGNQEASGAAVKLKAS---NPFGNARPREQV 351
                EA +G   + RP      R     +   E+SG    +K     NPFG+A+PRE +
Sbjct: 311 IDSEIEAKKGSSQTSRPTSAHSSRPSSAQSNRSESSGLNNVVKPRPKVNPFGDAKPREVL 370

[Close]

BLAST of Cp4.1LG05g13070.1 vs. NCBI nr
Match: gi|449458574|ref|XP_004147022.1| (PREDICTED: eukaryotic translation initiation factor 4B-like [Cucumis sativus])

HSP 1 Score: 654.1 bits (1686), Expect = 1.7e-184
Identity = 345/411 (83.94%), Postives = 372/411 (90.51%), Query Frame = 1


Query: 1   MAATMSPWGKPGAWALDAEEHEAELLKDQQEQSRSQSEPSADFPSLAAAAATKPKKKKGQ 60
           MAAT+SPWGKPGAWALDAEEHEAELLKDQ+EQSR Q EPSADFPSLAAAAATKPKKKKGQ
Sbjct: 1   MAATVSPWGKPGAWALDAEEHEAELLKDQEEQSRHQEEPSADFPSLAAAAATKPKKKKGQ 60

Query: 61  SIPLSEFHTYGGPKPSAQSSEPKGLTTEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQN 120
           SIPLSEF TYGGPKPSAQSS+PKGLT EDLMMLPTGPRQRT EE+DRNRLGGGFKSWGQN
Sbjct: 61  SIPLSEFQTYGGPKPSAQSSDPKGLTAEDLMMLPTGPRQRTAEEMDRNRLGGGFKSWGQN 120

Query: 121 SLYDRGNRYSNGEDSSNARRGSRVFDESRRSGDGSDREFGRESLPSRADEIDDWGAGKKP 180
           SLYDRGNRYSN EDS N+RR SRVFDESRR+ DGSDREF RESLPSRADEIDDWGAGKKP
Sbjct: 121 SLYDRGNRYSNSEDSPNSRRSSRVFDESRRTNDGSDREFRRESLPSRADEIDDWGAGKKP 180

Query: 181 MMGNGFERRDRGGGGGFFDSHSSKADESDSWVSNKSFSPSDGRRSGGRGGGFERERRVGF 240
           M+GNGFERR+RGGGGGFFDSHSSKADESDSWVS+KSF+PS+GRRS    GGF+RERR GF
Sbjct: 181 MVGNGFERRERGGGGGFFDSHSSKADESDSWVSSKSFTPSEGRRS----GGFDRERRGGF 240

Query: 241 PSNGGGADSDNWDRKSEGSRGRIGENGGGADSDSWGKRSEAARGGISERPRLNLQPRSLP 300
           P++GGGADSDNW RK +G+RG IGENGG ADS++WGKRSE  R GI ERPRLNLQPRS+P
Sbjct: 241 PTSGGGADSDNWGRKPDGARGGIGENGGSADSENWGKRSEGVRSGIGERPRLNLQPRSIP 300

Query: 301 LNNGNQEASGAAVKLKASNPFGNARPREQVLADKGQDWKKIDEKLESMKIKDTVVRAERS 360
           LNNGNQEASG AVK K SNPFGNARPRE+VLA+KGQDWKKIDE+LES+KIKDTV RAE S
Sbjct: 301 LNNGNQEASGVAVKPKGSNPFGNARPREEVLAEKGQDWKKIDEQLESVKIKDTVERAETS 360

Query: 361 SGASFER-KGFGSRNAWSPQDRSGSAWRRSESVESRPQSAEAVDVGPAEEN 411
           SGASFER KGFG+R+  SP   SG  WR+ ESVESRPQSAE V+ GPAEEN
Sbjct: 361 SGASFERKKGFGARSGRSPD--SGRTWRKPESVESRPQSAELVEDGPAEEN 405

[Close]

BLAST of Cp4.1LG05g13070.1 vs. NCBI nr
Match: gi|307136170|gb|ADN34011.1| (translation initiation factor [Cucumis melo subsp. melo])

HSP 1 Score: 651.4 bits (1679), Expect = 1.1e-183
Identity = 343/411 (83.45%), Postives = 372/411 (90.51%), Query Frame = 1


Query: 1   MAATMSPWGKPGAWALDAEEHEAELLKDQQEQSRSQSEPSADFPSLAAAAATKPKKKKGQ 60
           MAAT+SPWGKPGAWALDAEEHEAELLKDQQ+QSR QSEPSADFPSLAAAAATKPKKKKGQ
Sbjct: 1   MAATVSPWGKPGAWALDAEEHEAELLKDQQDQSRHQSEPSADFPSLAAAAATKPKKKKGQ 60

Query: 61  SIPLSEFHTYGGPKPSAQSSEPKGLTTEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQN 120
           SIPLSEF TYGGP+P+AQS++PKGLT EDLMMLPTGPRQRT EE+DRNRLGGGFKSWGQN
Sbjct: 61  SIPLSEFQTYGGPRPAAQSTDPKGLTAEDLMMLPTGPRQRTAEEMDRNRLGGGFKSWGQN 120

Query: 121 SLYDRGNRYSNGEDSSNARRGSRVFDESRRSGDGSDREFGRESLPSRADEIDDWGAGKKP 180
           SLYDRGNRYSN EDS N+RR SRVFDESRRS DGSDREF RESLPSRADEIDDWGAGKKP
Sbjct: 121 SLYDRGNRYSNSEDSPNSRRSSRVFDESRRSNDGSDREFRRESLPSRADEIDDWGAGKKP 180

Query: 181 MMGNGFERRDRGGGGGFFDSHSSKADESDSWVSNKSFSPSDGRRSGGRGGGFERERRVGF 240
           MMGNGFERR+RGGGGGFFDSHSSKADESDSWVS+KSF+PS+GRRS    GGF+RERR GF
Sbjct: 181 MMGNGFERRERGGGGGFFDSHSSKADESDSWVSSKSFTPSEGRRS----GGFDRERRGGF 240

Query: 241 PSNGGGADSDNWDRKSEGSRGRIGENGGGADSDSWGKRSEAARGGISERPRLNLQPRSLP 300
           P++GGGADSDNW RKS+G+R  +GENGGGADSD+WGK+SE  R GI ERPRLNLQPRS+P
Sbjct: 241 PTSGGGADSDNWGRKSDGARAGMGENGGGADSDNWGKKSEGVRSGIGERPRLNLQPRSIP 300

Query: 301 LNNGNQEASGAAVKLKASNPFGNARPREQVLADKGQDWKKIDEKLESMKIKDTVVRAERS 360
           LNNGNQEASG AVK K SNPFGNARPRE+VLA+KGQDWKKIDE+L SMKIKDTV RAE S
Sbjct: 301 LNNGNQEASGVAVKPKGSNPFGNARPREEVLAEKGQDWKKIDEQLGSMKIKDTVERAETS 360

Query: 361 SGASFE-RKGFGSRNAWSPQDRSGSAWRRSESVESRPQSAEAVDVGPAEEN 411
           SGASFE RKGFG R+  SP   SG +WR+ ES +SRPQSAE V+ GPAEEN
Sbjct: 361 SGASFERRKGFGVRSGRSPD--SGRSWRKPESADSRPQSAELVEDGPAEEN 405

[Close]

BLAST of Cp4.1LG05g13070.1 vs. NCBI nr
Match: gi|659115635|ref|XP_008457655.1| (PREDICTED: eukaryotic translation initiation factor 4B-like [Cucumis melo])

HSP 1 Score: 634.8 bits (1636), Expect = 1.0e-178
Identity = 333/398 (83.67%), Postives = 361/398 (90.70%), Query Frame = 1


Query: 1   MAATMSPWGKPGAWALDAEEHEAELLKDQQEQSRSQSEPSADFPSLAAAAATKPKKKKGQ 60
           MAAT+SPWGKPGAWALDAEEHEAELLKDQQ+QSR QSEPSADFPSLAAAAATKPKKKKGQ
Sbjct: 1   MAATVSPWGKPGAWALDAEEHEAELLKDQQDQSRHQSEPSADFPSLAAAAATKPKKKKGQ 60

Query: 61  SIPLSEFHTYGGPKPSAQSSEPKGLTTEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQN 120
           SIPLSEF TYGGP+P+AQS++PKGLT EDLMMLPTGPRQRT EE+DRNRLGGGFKSWGQN
Sbjct: 61  SIPLSEFQTYGGPRPAAQSTDPKGLTAEDLMMLPTGPRQRTAEEMDRNRLGGGFKSWGQN 120

Query: 121 SLYDRGNRYSNGEDSSNARRGSRVFDESRRSGDGSDREFGRESLPSRADEIDDWGAGKKP 180
           SLYDRGNRYSN EDS N+RR SRVFDESRRS DGSDREF RESLPSRADEIDDWGAGKKP
Sbjct: 121 SLYDRGNRYSNSEDSPNSRRSSRVFDESRRSNDGSDREFRRESLPSRADEIDDWGAGKKP 180

Query: 181 MMGNGFERRDRGGGGGFFDSHSSKADESDSWVSNKSFSPSDGRRSGGRGGGFERERRVGF 240
           MMGNGFERR+RGGGGGFFDSHSSKADESDSWVS+KSF+PS+GRRS    GGF+RERR GF
Sbjct: 181 MMGNGFERRERGGGGGFFDSHSSKADESDSWVSSKSFTPSEGRRS----GGFDRERRGGF 240

Query: 241 PSNGGGADSDNWDRKSEGSRGRIGENGGGADSDSWGKRSEAARGGISERPRLNLQPRSLP 300
           P++GGGADSDNW RKS+G+R  +GENGGGADSD+WGK+SE  R GI ERPRLNLQPRS+P
Sbjct: 241 PTSGGGADSDNWGRKSDGARAGMGENGGGADSDNWGKKSEGVRSGIGERPRLNLQPRSIP 300

Query: 301 LNNGNQEASGAAVKLKASNPFGNARPREQVLADKGQDWKKIDEKLESMKIKDTVVRAERS 360
           LNNGNQEASG AVK K SNPFGNARPRE+VLA+KGQDWKKIDE+L SMKIKDTV RAE S
Sbjct: 301 LNNGNQEASGVAVKPKGSNPFGNARPREEVLAEKGQDWKKIDEQLGSMKIKDTVERAETS 360

Query: 361 SGASFE-RKGFGSRNAWSPQDRSGSAWRRSESVESRPQ 398
           SGASFE RKGFG R+  SP   SG +WR+ ES +SRPQ
Sbjct: 361 SGASFERRKGFGVRSGRSPD--SGRSWRKPESADSRPQ 392

[Close]

BLAST of Cp4.1LG05g13070.1 vs. NCBI nr
Match: gi|1009151201|ref|XP_015893428.1| (PREDICTED: eukaryotic translation initiation factor 4B3 [Ziziphus jujuba])

HSP 1 Score: 407.9 bits (1047), Expect = 2.1e-110
Identity = 249/414 (60.14%), Postives = 293/414 (70.77%), Query Frame = 1


Query: 1   MAATMSPWGKPGAWALDAEEHEAELLKDQQEQSRSQSEPSADFPSLAAAAATKPKKKKGQ 60
           MAATMSPWGKPGAWALD+EEHEAEL   QQ + +  +EP  DFPSLAAAA TKPKKKKGQ
Sbjct: 1   MAATMSPWGKPGAWALDSEEHEAEL---QQLKEKEAAEPLPDFPSLAAAATTKPKKKKGQ 60

Query: 61  SIPLSEFHTYGGPKPSAQSS-EPKGLTTEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQ 120
           +I L+EF TYGG KP+A ++ EPKGLT ED + LPTGPR+R+ EELDRNRLGGGF+ +G 
Sbjct: 61  TITLAEFTTYGGAKPAAANNIEPKGLTHEDRLKLPTGPRERSAEELDRNRLGGGFRGYGS 120

Query: 121 NSLYDRGNRYSNGEDSSNARRGSRVFDESRRSGDGSDREFGRESLPSRADEIDDWGAGKK 180
           N  YDR NRYSNG++SSN+R GS    E R  G G  R+  RES PSRADEID+W A KK
Sbjct: 121 NGSYDRNNRYSNGDESSNSRWGSSRGSE-RNGGGGFGRDANRESGPSRADEIDNWAAAKK 180

Query: 181 PMMGNGFERRDRGGGGGFFDSHSSKADESDSWVSNKSFSPSDGRRSGGRGGGFERERRVG 240
               NGFER+DRGG   FFDS  SKADESDSWVSNKSF PS+GRR G  GGGFERERRV 
Sbjct: 181 SPTRNGFERKDRGG---FFDSQ-SKADESDSWVSNKSFVPSEGRRFGSSGGGFERERRVS 240

Query: 241 FPSNGGGADSDNWDRKSEGSRGRIGENGGGADSDSWGKRSEAARGGISERPRLNLQPRSL 300
           F SNGGGADSDNW +K E S G    NG                   S RPRLNLQPR+L
Sbjct: 241 FTSNGGGADSDNWGKKREESYGVTTVNGTE-----------------SGRPRLNLQPRTL 300

Query: 301 PLNNGNQEASGAAV--KLKASNPFGNARPREQVLADKGQDWKKIDEKLESMKIKDTVVRA 360
           P+++G  + S   V  K K SNPFG+ARPRE+VLA+KGQDWKKIDE+LES K+K T  +A
Sbjct: 301 PVSDGGSQGSATVVVAKTKGSNPFGDARPREEVLAEKGQDWKKIDEQLES-KVKHTNDKA 360

Query: 361 ERSSGASFERKGFGSRN--AWSPQDRSGSAWRRSESVESRPQSAEAVDVGPAEE 410
               G+SF ++ FG  N  A S  D +   WR+ +  ++RP SAE ++ G +EE
Sbjct: 361 -ADGGSSFGKRSFGIGNGRAGSSSDSAEKTWRKPDGSDARPTSAEKIENGNSEE 387

[Close]

BLAST of Cp4.1LG05g13070.1 vs. NCBI nr
Match: gi|694405646|ref|XP_009377666.1| (PREDICTED: eukaryotic translation initiation factor 4B-like [Pyrus x bretschneideri])

HSP 1 Score: 391.3 bits (1004), Expect = 2.0e-105
Identity = 248/415 (59.76%), Postives = 293/415 (70.60%), Query Frame = 1


Query: 1   MAATMSPWGKPGAWALDAEEHEAELLKD-QQEQSRSQSEPSADFPSLAAAAATKPKKKKG 60
           MAAT+SPW KPGAWAL AEE EAEL +  ++EQ R+   PSADFPSL+AAAATKPKKKK 
Sbjct: 1   MAATVSPWAKPGAWALAAEEQEAELEQQAKEEQQRAVEPPSADFPSLSAAAATKPKKKK- 60

Query: 61  QSIPLSEFHTYGGPKPSAQSSEPKGLTTEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQ 120
           Q+I L+EF+ +G PKP   +  P GLT ED M+LPTGPR+RT EELDRNRLGGGF+S+G 
Sbjct: 61  QTISLAEFNNFGAPKPKP-AEHPVGLTHEDRMLLPTGPRERTAEELDRNRLGGGFRSYGG 120

Query: 121 NSLYDRGN-RYSNGEDSSNARRGSRVFDESRRSGDGSDREFGRESLPSRADEIDDWGAGK 180
               DRGN RYSNG++SS ++ GS      +R   G  RE  R+  PSRADE+DDWGA K
Sbjct: 121 ----DRGNSRYSNGDESSESKWGS-----GQRKEGGFGRESNRDE-PSRADEVDDWGAKK 180

Query: 181 KPMMGNGFERRDRGG-GGGFFDSHSSKADESDSWVSNKSFSPSDGRRSGGRGGGFERERR 240
           K M G GFERR+RGG GG FF    SKADES+SWVSNKS   S+GRR GG G GF+RER+
Sbjct: 181 KSMPGTGFERRERGGPGGSFFGGSQSKADESNSWVSNKSSMQSEGRRFGGGGSGFDRERK 240

Query: 241 VGFPSNGGGADSDNWDRKSEGSRGRIG----------ENGGGADSDSWGKRSEAARGGIS 300
           VGFPSN GGADSDNW RK E + G  G           NGGGADSD WGK+ E + GG+S
Sbjct: 241 VGFPSN-GGADSDNWGRKKEETNGGSGFDRERKVGFVSNGGGADSDVWGKKREESNGGLS 300

Query: 301 E---RPRLNLQPRSLPLNNGNQEASGAAVKLKASNPFGNARPREQVLADKGQDWKKIDEK 360
           E   RPRLNLQPRSLP++N     S    K K SNPFG ARPRE+VLA+KG+DWK+IDE+
Sbjct: 301 ESTARPRLNLQPRSLPVSNETSPGSTTPPKPKGSNPFGAARPREEVLAEKGKDWKEIDEQ 360

Query: 361 LESMKIKDTVVRAERSSGASFERKGFGSRNAWSPQDRSGSAWRRSESVESRPQSA 400
           LES KIK+     E ++  SF R  FG  N     DR+  AWR+ +S +SRPQSA
Sbjct: 361 LESAKIKEV---KEIANSESFGR-SFGMGNG-RAGDRTERAWRKPDSADSRPQSA 397

The following BLAST results are available for this feature:

BLAST of Cp4.1LG05g13070.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
IF4B3_ARATH	1.0e-77	48.95	Eukaryotic translation initiation factor 4B3 OS=Arabidopsis thaliana GN=EIF4B3 P...	[more]
IF4B1_WHEAT	2.9e-35	36.32	Eukaryotic translation initiation factor 4B1 OS=Triticum aestivum GN=EIF4B PE=1 ...	[more]
IF4B2_ARATH	1.1e-29	34.84	Eukaryotic translation initiation factor 4B2 OS=Arabidopsis thaliana GN=EIF4B2 P...	[more]
IF4B1_ARATH	1.7e-24	33.42	Eukaryotic translation initiation factor 4B1 OS=Arabidopsis thaliana GN=EIF4B1 P...	[more]

BLAST of Cp4.1LG05g13070.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJC8_CUCSA	1.2e-184	83.94	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G263980 PE=4 SV=1	[more]
E5GC13_CUCME	7.5e-184	83.45	Translation initiation factor OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
F6I126_VITVI	8.0e-101	56.19	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0038g01950 PE=4 SV=...	[more]
A5BQN4_VITVI	3.0e-100	56.39	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_029831 PE=4 SV=1	[more]
A0A0A0K4M1_CUCSA	5.7e-91	53.30	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G009760 PE=4 SV=1	[more]

BLAST of Cp4.1LG05g13070.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G38710.2	2.0e-79	50.00	glycine-rich protein	[more]
AT1G13020.1	5.9e-31	34.84	eukaryotic initiation factor 4B2	[more]
AT3G26400.1	9.8e-26	33.42	eukaryotic translation initiation factor 4B1	[more]

BLAST of Cp4.1LG05g13070.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449458574\|ref\|XP_004147022.1\|	1.7e-184	83.94	PREDICTED: eukaryotic translation initiation factor 4B-like [Cucumis sativus]	[more]
gi\|307136170\|gb\|ADN34011.1\|	1.1e-183	83.45	translation initiation factor [Cucumis melo subsp. melo]	[more]
gi\|659115635\|ref\|XP_008457655.1\|	1.0e-178	83.67	PREDICTED: eukaryotic translation initiation factor 4B-like [Cucumis melo]	[more]
gi\|1009151201\|ref\|XP_015893428.1\|	2.1e-110	60.14	PREDICTED: eukaryotic translation initiation factor 4B3 [Ziziphus jujuba]	[more]
gi\|694405646\|ref\|XP_009377666.1\|	2.0e-105	59.76	PREDICTED: eukaryotic translation initiation factor 4B-like [Pyrus x bretschneid...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003743	translation initiation factor activity

Vocabulary: **INTERPRO**
Term	Definition
IPR010433	EIF-4B_pln

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006446	regulation of translational initiation
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003743	translation initiation factor activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG05g13070	Cp4.1LG05g13070	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG05g13070.1:five_prime_utr:001	Cp4.1LG05g13070.1:five_prime_utr:001	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG05g13070.1:cds:001	Cp4.1LG05g13070.1:cds:001	CDS
Cp4.1LG05g13070.1:cds:002	Cp4.1LG05g13070.1:cds:002	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG05g13070.1:three_prime_utr:001	Cp4.1LG05g13070.1:three_prime_utr:001	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG05g13070.1	Cp4.1LG05g13070.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010433	Plant specific eukaryotic initiation factor 4B	PFAM	PF06273	eIF-4B	coord: 238..368 score: 2.0E-15coord: 7..233 score: 1.9
None	No IPR available	unknown	Coil	Coil	coord: 16..36 scor
None	No IPR available	PANTHER	PTHR32091	FAMILY NOT NAMED	coord: 2..402 score: 6.0E
None	No IPR available	PANTHER	PTHR32091:SF5	GLYCINE-RICH PROTEIN	coord: 2..402 score: 6.0E