Cp4.1LG05g03580.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.CTTCTAGCTATTCTTGTCGTAATATTTGGGATATGGATGGGCACGCACCATGACGGCTGTCGAAAATCTCTTACTCTTCCTGTTATGGGACTTGGTGGATTCATCTTTGTGGTGTAAGTTTTCAATTCTTTTGAGGAATGCAATCTTGTTTAGTTCAGAGTATATTCTGTTTCACTCACCCAATATTGTTGCTATCAAAACTTTTGAACCAGGTCTATAGTTGGTTTTTTTGGTGCTCTTAAGAACAGTTCCATATTGCTGTGGATTGTATCCTTTTAAATGTTTTGTCTTAACATTTGATGTTAATTTTCCCAATATTTGCTCGACCTTGACCTTCTGCTTGTAGTATTTGATCATGCTGTGCATTACGTTGGTGGGGATTCTGGTGTTTACGGTGCTGGCGTAAGTATATGTTTCTGAAGTAGATTCATTATCAAACCCATGATTGCAACCCTTCTCATGTTTCTAAACTTTAACATATTGAAAAGAATTACATTGCTTTCTCACATGTCCTATTTGAATATGTTCTACTAGGTAAAATCGACTTATGTTTCTATGTTTTGTGTACTTGTCAAACGATTCCTTTGATGCATTATGTCGGGATGCCTTCTAAATAAGATTGAGATGAGTGAAAGAAGGAGCTGGTGTGAAAAGCATCAGTCTTTATTGAGTGGATGACATTGTTTCCCTTCAAGGTTTTGAAACGCGTTCTAGGAAAAGATTTCTATACGCTTATAAGGAATGTTTCGTTCCCCTCTCCAACCGATGTGGGATCTCACAATCCTCCCTCCTTAGGGGCCCAACATCCTCGCTAACACATTGCTCGGTGTCTAGTTCTGATACCATTTGTAATAGCCCAAGTCCACCACTAGCAGATATTGTCCTTTTTGGGCTTTCCTTTTCGAGCTTCCTCTCAAAGTTTTAAAACGTGTCTGCTAGGGAGAGGTTTCCACNTATGTTTGATGGGTTTTGCCTGCATTGCCTTTGAATTGTTTTCATATGTTCAATGAGTTTCATAATCCTTTTCTCTGTTGTGGGAGTTCATACGAGAATGAGTTTATGTAGCAGGGCTTTAAGCATTAGTTAACTATGTCTTAGCAAGACTACTTGGGTCTAGGATTGCCCATCTTGCAATAAAATCACTCTGTATCTTCATGTTACAGCTTCTAGCTATTCTTGTCGTAATATTTGGGATATGGATGGGCACGCACCATGACGGCTGTCGAAAATCTCTTACTCTTCCTGTTATGGGACTTGGTGGATTCATCTTTGTGGTGTAAGTTTTCAATTCTTTTGAGGAATGCAATCTTGTTTAGTTCAGAGTATATTCTGTTTCACTCACCCAATATTGTTGCTATCAAAACTTTTGAACCAGGTCTATAGTTGGTTTTTTTGGTGCTCTTAAGAACAGTTCCATATTGCTGTGGATTGTATCCTTTTAAATGTTTTGTCTTAACATTTGATGTTAATTTTCCCAATATTTGCTCGACCTTGACCTTCTGCTTGTAGTATTTGATCATGCTGTGCATTACGTTGGTGGGGATTCTGGTGTTTACGGTGCTGGCGTAAGTATATGTTTCTGAAGTAGATTCATTATCAAACCCATGATTGCAACCCTTCTCATGTTTCTAAACTTTAACATATTGAAAAAAATTACATTGCTTTCTCACATGTCCTATTTGAATATGTTCTACTAGGTAAAATTTACGACTTATGTTTCTATGTTTTGTGTACTTGTCAAACGATTCCTTTGATGCATTATGTCGGGATGCCTTCTAAATAAGATTGAGATGAGTGAAAGAAGGAGCTGGTGTGATCACGAGAGGCGATGCTTTTCAGTCTTTATTGAGTGGATGACATTGTTTCCCTTCAAGGTTTTGAAACGCGTTCTAGGAAAAGATTTCTATACGCTTATAAGGAATGTTTCGTTCCCCTCTCCAACCGATGTGGGATCTCACAATCCTCCCTCCTTAAGGGCCCAACATCCTCGCTGACACACTGCTCGGTGTCTAGTTATGATATCATTTGTAATAGCCCAAGTTCACCACTAGCAGATATTGTCCTCTTTGGGCTTTCTTTTTCGAGCTTCCTCTCAAAGTTTTAAAACGTGTCAGTTAGGGAGAGGTTTCCACACCCTTGTTTCGTTCTCCTTTCCAACCAATGTGGGATCTCACAAATGATAAAGTTAGACCATGAGATGAGAACTACGCTATACTTAAACCACGGTTTCACTTTCATTCATGGCTCACTCCTTTCATTTACTTTTATTTTCTTTGTTATCTTCACATGATCCCTTCAAGATATAAAAGGAAGTATCAAAGTGGACATCCTTAGTTATTCTCATCTTTTAGCCACCAAAATTACATGGCTCACACCTCCTCTTTGCGAATGCTTGAACCTTGCTTTGGTGTCTTCCCAGTTGGTATGTAGTTTGTATTGTTGTACTCTTCCTGAACCTAACGTAACTATTTGAATCCCTTTTAGGTTTATTGTTACAAACAATGGTTCAGGGCATTCTGTTGCTGGCTTGAGGTAAGTAACTTTGTTTTGAGGATGCTTAAGAGTAACTGGTGCTGATAATGCTCGAAGTTCGGTTCTTGTTGCATCGACACTGATATATTTTCCCCTTTCTTCCCATTGATGAGGTATAAGGAGTATCAACTACAAGATTATAGTACATGGTTTCTAAAACAGGTGAGTGCTATTTTAGTTTTTGTTGAGAGATTAAGATCATTTATTTCTGCTAATCTTGGCGCACCGTTACAGCTTAATGATACCGACAATTGGATGCGTTTGAAAAGCTGTCTCGTCAAATCCGAGGACTGTAATATTCTTTCAAAAAAATACAAGGTTCTTGTTTCGAGCTTGGACGATTTGAATATGAGACTATTTGAACTTTTTCATGAAGTCATTTTGTTTGGCAATTTCAGACTCTCAAGCAGTATAAGTTGGCAAAGCTGACGCCAATTGAAGCAGGTTGTTGCAGACCCCCATCCGAGTAGGTGTAACTTTCAAATTCCTTGTTCGTTTTCTTATGTTAATATCAGCAATAAACAAAAGAAGAAACTAAATTCATGTGCTTTTCGTAAGGCCGTAAGCTATGCATTTGAATTCTTGTGACTGATGCTATCTTTTGGGCATCCTGATATGAATGATAGGTGTGGTTATCCTGCTGTTAATGCATCATTTTATGACTTGAGTTTTCATCCTGTCAATTCAAACCATGACTGCAAACTATACAAGAATTCGAAGGCAGTCAAGTGTTACGATTGCGATTCGTGCAAGTAAATATCTCTTGTGACGTTATTCTTTCATTCATTCTCCGTTTCATCATCATTTGATTGTTTGATCATTCAGGGCCGGAGTCGCACAGTACATGAAAACGGAATGGCGATTGGTTGCGATCTTCAATGTCGTTCTATTTGTTATCTTGGTAAGACACTTTCTGCTAGCACTTCCAGATCTTTTCAATTCCCTTTCTTTATTTCTTAACTCTTAGTTCGATTTCCAGCTGATGATCTACTTAGTTGGATGCTGCGCGAGACGAAAAGCTGCAAGTAATCGGTCTAAAGGATAG CTTCTAGCTATTCTTGTCGTAATATTTGGGATATGGATGGGCACGCACCATGACGGCTGTCGAAAATCTCTTACTCTTCCTGTTATGGGACTTGGTGGATTCATCTTTGTGTTTTCAATTCTTTTGAGGAATGCAATCTTGTTTAGTTCAGAGTATATTCTGTTTCACTCACCCAATATTGTTGCTATCAAAACTTTTGAACCAGTATTTGATCATGCTGTGCATTACGTTGGTGGGGATTCTGGTGTTTACGGTGCTGGCCTTCTAGCTATTCTTGTCGTAATATTTGGGATATGGATGGGCACGCACCATGACGGCTGTCGAAAATCTCTTACTCTTCCTGTTATGGGACTTGGTGGATTCATCTTTGTGGTGTCTATAGTTGGTTTTTTTGGTGCTCTTAAGAACAGTTCCATATTGCTGTGGATTTATTTGATCATGCTGTGCATTACGTTGGTGGGGATTCTGGTGTTTACGGTGCTGGCGTTTATTGTTACAAACAATGGTTCAGGGCATTCTGTTGCTGGCTTGAGGTATAAGGAGTATCAACTACAAGATTATAGTACATGGTTTCTAAAACAGCTTAATGATACCGACAATTGGATGCGTTTGAAAAGCTGTCTCGTCAAATCCGAGGACTGTAATATTCTTTCAAAAAAATACAAGACTCTCAAGCAGTATAAGTTGGCAAAGCTGACGCCAATTGAAGCAGGTTGTTGCAGACCCCCATCCGAGTGTGGTTATCCTGCTGTTAATGCATCATTTTATGACTTGAGTTTTCATCCTGTCAATTCAAACCATGACTGCAAACTATACAAGAATTCGAAGGCAGTCAAGTGTTACGATTGCGATTCGTGCAAGGCCGGAGTCGCACAGTACATGAAAACGGAATGGCGATTGGTTGCGATCTTCAATGTCGTTCTATTTGTTATCTTGCTGATGATCTACTTAGTTGGATGCTGCGCGAGACGAAAAGCTGCAAGTAATCGGTCTAAAGGATAG CTTCTAGCTATTCTTGTCGTAATATTTGGGATATGGATGGGCACGCACCATGACGGCTGTCGAAAATCTCTTACTCTTCCTGTTATGGGACTTGGTGGATTCATCTTTGTGTTTTCAATTCTTTTGAGGAATGCAATCTTGTTTAGTTCAGAGTATATTCTGTTTCACTCACCCAATATTGTTGCTATCAAAACTTTTGAACCAGTATTTGATCATGCTGTGCATTACGTTGGTGGGGATTCTGGTGTTTACGGTGCTGGCCTTCTAGCTATTCTTGTCGTAATATTTGGGATATGGATGGGCACGCACCATGACGGCTGTCGAAAATCTCTTACTCTTCCTGTTATGGGACTTGGTGGATTCATCTTTGTGGTGTCTATAGTTGGTTTTTTTGGTGCTCTTAAGAACAGTTCCATATTGCTGTGGATTTATTTGATCATGCTGTGCATTACGTTGGTGGGGATTCTGGTGTTTACGGTGCTGGCGTTTATTGTTACAAACAATGGTTCAGGGCATTCTGTTGCTGGCTTGAGGTATAAGGAGTATCAACTACAAGATTATAGTACATGGTTTCTAAAACAGCTTAATGATACCGACAATTGGATGCGTTTGAAAAGCTGTCTCGTCAAATCCGAGGACTGTAATATTCTTTCAAAAAAATACAAGACTCTCAAGCAGTATAAGTTGGCAAAGCTGACGCCAATTGAAGCAGGTTGTTGCAGACCCCCATCCGAGTGTGGTTATCCTGCTGTTAATGCATCATTTTATGACTTGAGTTTTCATCCTGTCAATTCAAACCATGACTGCAAACTATACAAGAATTCGAAGGCAGTCAAGTGTTACGATTGCGATTCGTGCAAGGCCGGAGTCGCACAGTACATGAAAACGGAATGGCGATTGGTTGCGATCTTCAATGTCGTTCTATTTGTTATCTTGCTGATGATCTACTTAGTTGGATGCTGCGCGAGACGAAAAGCTGCAAGTAATCGGTCTAAAGGATAG LLAILVVIFGIWMGTHHDGCRKSLTLPVMGLGGFIFVFSILLRNAILFSSEYILFHSPNIVAIKTFEPVFDHAVHYVGGDSGVYGAGLLAILVVIFGIWMGTHHDGCRKSLTLPVMGLGGFIFVVSIVGFFGALKNSSILLWIYLIMLCITLVGILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQDYSTWFLKQLNDTDNWMRLKSCLVKSEDCNILSKKYKTLKQYKLAKLTPIEAGCCRPPSECGYPAVNASFYDLSFHPVNSNHDCKLYKNSKAVKCYDCDSCKAGVAQYMKTEWRLVAIFNVVLFVILLMIYLVGCCARRKAASNRSKG
BLAST of Cp4.1LG05g03580.1 vs. Swiss-Prot
Match: TET10_ARATH (Tetraspanin-10 OS=Arabidopsis thaliana GN=TET10 PE=2 SV=1) HSP 1 Score: 369.8 bits (948), Expect = 3.2e-101 Identity = 174/226 (76.99%), Postives = 200/226 (88.50%), Query Frame = 1
BLAST of Cp4.1LG05g03580.1 vs. Swiss-Prot
Match: TET8_ARATH (Tetraspanin-8 OS=Arabidopsis thaliana GN=TET8 PE=2 SV=1) HSP 1 Score: 191.0 bits (484), Expect = 2.0e-47 Identity = 95/240 (39.58%), Postives = 150/240 (62.50%), Query Frame = 1
BLAST of Cp4.1LG05g03580.1 vs. Swiss-Prot
Match: TET7_ARATH (Tetraspanin-7 OS=Arabidopsis thaliana GN=TET7 PE=2 SV=1) HSP 1 Score: 176.4 bits (446), Expect = 5.2e-43 Identity = 88/240 (36.67%), Postives = 143/240 (59.58%), Query Frame = 1
BLAST of Cp4.1LG05g03580.1 vs. Swiss-Prot
Match: TET3_ARATH (Tetraspanin-3 OS=Arabidopsis thaliana GN=TET3 PE=2 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 4.4e-42 Identity = 83/243 (34.16%), Postives = 146/243 (60.08%), Query Frame = 1
BLAST of Cp4.1LG05g03580.1 vs. Swiss-Prot
Match: TET9_ARATH (Tetraspanin-9 OS=Arabidopsis thaliana GN=TET9 PE=2 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 8.3e-41 Identity = 84/246 (34.15%), Postives = 148/246 (60.16%), Query Frame = 1
BLAST of Cp4.1LG05g03580.1 vs. TrEMBL
Match: A0A0A0KNY7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G154840 PE=3 SV=1) HSP 1 Score: 477.2 bits (1227), Expect = 1.6e-131 Identity = 230/245 (93.88%), Postives = 241/245 (98.37%), Query Frame = 1
BLAST of Cp4.1LG05g03580.1 vs. TrEMBL
Match: D7TW33_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0025g03960 PE=3 SV=1) HSP 1 Score: 436.4 bits (1121), Expect = 3.1e-119 Identity = 206/245 (84.08%), Postives = 229/245 (93.47%), Query Frame = 1
BLAST of Cp4.1LG05g03580.1 vs. TrEMBL
Match: A0A067K0Z1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20625 PE=3 SV=1) HSP 1 Score: 434.1 bits (1115), Expect = 1.5e-118 Identity = 204/245 (83.27%), Postives = 227/245 (92.65%), Query Frame = 1
BLAST of Cp4.1LG05g03580.1 vs. TrEMBL
Match: A0A061G4C3_THECC (Tetraspanin10 OS=Theobroma cacao GN=TCM_016216 PE=3 SV=1) HSP 1 Score: 427.6 bits (1098), Expect = 1.4e-116 Identity = 200/245 (81.63%), Postives = 228/245 (93.06%), Query Frame = 1
BLAST of Cp4.1LG05g03580.1 vs. TrEMBL
Match: A0A0B0PYQ5_GOSAR (CD63 antigen OS=Gossypium arboreum GN=F383_15036 PE=3 SV=1) HSP 1 Score: 424.9 bits (1091), Expect = 9.3e-116 Identity = 199/243 (81.89%), Postives = 224/243 (92.18%), Query Frame = 1
BLAST of Cp4.1LG05g03580.1 vs. TAIR10
Match: AT1G63260.1 (AT1G63260.1 tetraspanin10) HSP 1 Score: 369.8 bits (948), Expect = 1.8e-102 Identity = 174/226 (76.99%), Postives = 200/226 (88.50%), Query Frame = 1
BLAST of Cp4.1LG05g03580.1 vs. TAIR10
Match: AT2G23810.1 (AT2G23810.1 tetraspanin8) HSP 1 Score: 191.0 bits (484), Expect = 1.1e-48 Identity = 95/240 (39.58%), Postives = 150/240 (62.50%), Query Frame = 1
BLAST of Cp4.1LG05g03580.1 vs. TAIR10
Match: AT4G28050.1 (AT4G28050.1 tetraspanin7) HSP 1 Score: 176.4 bits (446), Expect = 2.9e-44 Identity = 88/240 (36.67%), Postives = 143/240 (59.58%), Query Frame = 1
BLAST of Cp4.1LG05g03580.1 vs. TAIR10
Match: AT3G45600.1 (AT3G45600.1 tetraspanin3) HSP 1 Score: 173.3 bits (438), Expect = 2.5e-43 Identity = 83/243 (34.16%), Postives = 146/243 (60.08%), Query Frame = 1
BLAST of Cp4.1LG05g03580.1 vs. TAIR10
Match: AT4G30430.1 (AT4G30430.1 tetraspanin9) HSP 1 Score: 169.1 bits (427), Expect = 4.6e-42 Identity = 84/246 (34.15%), Postives = 148/246 (60.16%), Query Frame = 1
BLAST of Cp4.1LG05g03580.1 vs. NCBI nr
Match: gi|449452354|ref|XP_004143924.1| (PREDICTED: tetraspanin-10 [Cucumis sativus]) HSP 1 Score: 477.2 bits (1227), Expect = 2.3e-131 Identity = 230/245 (93.88%), Postives = 241/245 (98.37%), Query Frame = 1
BLAST of Cp4.1LG05g03580.1 vs. NCBI nr
Match: gi|225426866|ref|XP_002283515.1| (PREDICTED: tetraspanin-10 isoform X1 [Vitis vinifera]) HSP 1 Score: 436.4 bits (1121), Expect = 4.4e-119 Identity = 206/245 (84.08%), Postives = 229/245 (93.47%), Query Frame = 1
BLAST of Cp4.1LG05g03580.1 vs. NCBI nr
Match: gi|731379424|ref|XP_010661014.1| (PREDICTED: tetraspanin-10 isoform X2 [Vitis vinifera]) HSP 1 Score: 436.4 bits (1121), Expect = 4.4e-119 Identity = 206/245 (84.08%), Postives = 229/245 (93.47%), Query Frame = 1
BLAST of Cp4.1LG05g03580.1 vs. NCBI nr
Match: gi|802740808|ref|XP_012086951.1| (PREDICTED: tetraspanin-10 [Jatropha curcas]) HSP 1 Score: 434.1 bits (1115), Expect = 2.2e-118 Identity = 204/245 (83.27%), Postives = 227/245 (92.65%), Query Frame = 1
BLAST of Cp4.1LG05g03580.1 vs. NCBI nr
Match: gi|590677991|ref|XP_007040174.1| (Tetraspanin10 [Theobroma cacao]) HSP 1 Score: 427.6 bits (1098), Expect = 2.1e-116 Identity = 200/245 (81.63%), Postives = 228/245 (93.06%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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