Cp4.1LG05g00690.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATTAATATATTCTCAAAATATTATATAAATATCTTGACCGATTCAAACTAACAATATTCTTGCTCATCTTCTTCTTTTTCATCTTTTGTGTACGGATTATGAACTTGGGAGGCCTTCCAATTTATAATGGAAACAAGTTGTTGAGTGGTCCTTTTGCAGTTCATCGGCTTTAAATTTCTATGGTCCATTCTTCTCTGAAAAGAAATTGATAAATATACAAGGTTAAAAGGTAATATTGTTACATATTTTTGTATCATTTTTTTTTTTTTTTATATAGTTAGTCGAGAATTAATAGCATCCAAATTCACCGATATTCATTTTACTTTGAAATTTAAATGGAATTTGGATCGGTTGAGTTAATTGTTAGAGNTGGCTTTGTTGAGTTTGTTTTTGGTTCTTGTTTTTGTTTTAGAATATTTTGAAGAATTTGTAACCAAGATATTGAAAAGCTGGGTGGGCTGTTTTTATAAATCATGGAGGCAATAGATTCTTCATCGATTTCTTAATTGGGGGAAATTGCATCTCAAATTCTATTGAGATCGTCAATTTTCGATTTCGATTCGAATTTCTGTGCGATGGGCACGACGGGCAGTGATGTTGAAGCAGGGTTTGCGAAGCTTCAGGGCGAGGATTTCGAATACTATATGCAAACCTACTCCATAATCCTCGGCCGGAATTCCAAGAAATCCACCGTTGACGTCGACCTGTCCAGCCTCGGCGGCGGCATGAATATTTCCCGCCACCACGCTCGTATTTTCTACGATTTCACGAGGCGGCGATTTGCCCTAGAAGTGCTCGGAAAAAATGGCTGCCTCGTTGAAGGAGTTCTTCATCTGCCCGGAAACGCGCCGGTCAAGCTCGATTCTCAAGATCTTCTTCAGATTGGGGATAAGGAGTTCTATTTCTTGTTGCCGGTGAGGAATATTTTGGGTGCCTCGGTTGGGGCGAGGAGCCATTTAGGTCATTCCGGATCGGCGGGGGCGGGTCCTGCGGTGACCGGGGCGGTAGTGCCGCCGCATTCGCACTATAATTTTCATTTGGCTGGCTCTGGAGGAGGCGCTGCTGCAGGGACGACGGGGAAGAAAGGGAAAGGACGAGAGTATTATGAGGAGGGATATGAGGACGAGGATGATATTGGGGGAAGTAGCGGCAAGAAGTTCCGGCGGGATGGATATGGAGCTGGTGGTTCTGGTGGAAAAGTAGGATTTTCCGGCGGAATGGGTTAGCATCTTTCTTGTTCTTCGTTTTTGCATTGGTTGCTTGATTACTTTTAGAGGTTTAGAAATAATCTATGTTGAAGTTTCTGATAGTGTCGCTTTGATTTTCATTCTTAGACAATTGAATCCAGAATTGGGTAACTTTTGATCATGGTAGTGTTTACTTATAGTGCCAGATTTTAGTGTATACTGCCCGAAAGTCTGTCGTATTGTGGAGGTTCGTAGTTTCTAACATGGTATCAGAGTAATGTTCTTAACTTAGTCATGCTAATAGAATCCTCAAGTGTCAAATAAAATAGTTGTGGGTCTCGAATGTGTAGTCAAAGGTGCCTCAAGTGTCGAACAAAGGGTGCACTTTGTTCGAGAGCTCCGAGGAAGGAGTCTACCCTCGATTAAGGGGAGACTATTCGAGAGCTCTAGAGAAGGGGTATAGTCAAAGGTGACTCATGTGTCGAACAAAGGGTGTACTTTGTTTGAGGGCTCTAGGGAACGAGTCTAGATTCGATTAAGGGGAGGTTATTCGAGAGCTCTAAAGAAGGAGGTATAGTTAAAGTTGACTCAAGTGTCGAACAAAGGGGGAACTTTGTTCCAAGGCTCCAGGGAAGGAGTCGAGCCTCGGTTAAGGGGAGGTTGTTCGAGAGCTCCAGAGAAGGAGGCCTCAGGGGAGGCTCTATGTATACTTTCTTCGAGGGGAGGATTATTGACAGGAGTAGTCTCACATTAGCTAATTAAGAGGAAGATCATGTAAGTAAGGACCGCTATCTCTATTGGTATGAAACCTTTTGGAGAAACCAAAAGTAAAACCATAAGAGTTTATGCTCGAAGTAGACAATATCATACCTGTAGAGGTTCGTGGTTCCTAACAGTGTTGTGGATCGTAGATCGTGGACGGAGTATATGTGATGTTCATCTTTGTCTATATGTTTTTGTTGTCTCCTTCTCATTCTTGAGTATGGATCTTCTAAATTCTGTATATCTGTATGGCATAGATATTAAGATTTCTCTTGAACCATAATCTACAGTTTCCATGGACAAGAAGTTAGATGGAAGATCAAGAGTTGAACGAGAAGCTGATAATCAGCTCCTCCAGGAGGAAAAGGACGTCGTATCATCGGTAGCTACCGTGCTGTCTGATCTTTGTGGCCCGGGCGAATGGATGCCTATGGAGAAACTCCACTCTGAGGTATGTTTGATTAGGAAGGCTCCTCTTGAATCTTAAGTAAATGAAGGAGAAACTGAACCTATGATAGGCTGTTTATAAGGGTTGCTAGCTTTTGTAAGGCTCGACTTTTCTGTCATTCTCGACTTCTATTGTGGTCGACCTAAAAAGTTATGTTCACATGTGGGAGAACTGATTACTTGATGCTTTATTTGTCGTAGCTGGTCGAGAATTATGGCAGTGTTTGGCACCACAGTCGTGTAAGGAAGTACCTCAAATCAGAGGATCGGCACGGTTCTGAAGCCAAGGATAAACCATGGTATGGCCTGCTTATGTTGTTGAGAAAATACCCAGAACACTTTGTGATTAACACGAGATCCAAGGGCCGAGTAACGCTCGAGTTCGTCTCG ATTAATATATTCTCAAAATATTATATAAATATCTTGACCGATTCAAACTAACAATATTCTTGCTCATCTTCTTCTTTTTCATCTTTTGTGTACGGATTATGAACTTGGGAGGCCTTCCAATTTATAATGGAAACAAGTTGTTGAGTGGTCCTTTTGCAGTTCATCGGCTTTAAATTTCTATGGTCCATTCTTCTCTGAAAAGAAATTGATAAATATACAAGGTTAAAAGAATATTTTGAAGAATTTGTAACCAAGATATTGAAAAGCTGGGTGGGCTGTTTTTATAAATCATGGAGGCAATAGATTCTTCATCGATTTCTTAATTGGGGGAAATTGCATCTCAAATTCTATTGAGATCGTCAATTTTCGATTTCGATTCGAATTTCTGTGCGATGGGCACGACGGGCAGTGATGTTGAAGCAGGGTTTGCGAAGCTTCAGGGCGAGGATTTCGAATACTATATGCAAACCTACTCCATAATCCTCGGCCGGAATTCCAAGAAATCCACCGTTGACGTCGACCTGTCCAGCCTCGGCGGCGGCATGAATATTTCCCGCCACCACGCTCGTATTTTCTACGATTTCACGAGGCGGCGATTTGCCCTAGAAGTGCTCGGAAAAAATGGCTGCCTCGTTGAAGGAGTTCTTCATCTGCCCGGAAACGCGCCGGTCAAGCTCGATTCTCAAGATCTTCTTCAGATTGGGGATAAGGAGTTCTATTTCTTGTTGCCGGTGAGGAATATTTTGGGTGCCTCGGTTGGGGCGAGGAGCCATTTAGGTCATTCCGGATCGGCGGGGGCGGGTCCTGCGGTGACCGGGGCGGTAGTGCCGCCGCATTCGCACTATAATTTTCATTTGGCTGGCTCTGGAGGAGGCGCTGCTGCAGGGACGACGGGGAAGAAAGGGAAAGGACGAGAGTATTATGAGGAGGGATATGAGGACGAGGATGATATTGGGGGAAGTAGCGGCAAGAAGTTCCGGCGGGATGGATATGGAGCTGGTGGTTCTGGTGGAAAAGTAGGATTTTCCGGCGGAATGGTTTCCATGGACAAGAAGTTAGATGGAAGATCAAGAGTTGAACGAGAAGCTGATAATCAGCTCCTCCAGGAGGAAAAGGACGTCGTATCATCGGTAGCTACCGTGCTGTCTGATCTTTGTGGCCCGGGCGAATGGATGCCTATGGAGAAACTCCACTCTGAGTACCTCAAATCAGAGGATCGGCACGGTTCTGAAGCCAAGGATAAACCATGGTATGGCCTGCTTATGTTGTTGAGAAAATACCCAGAACACTTTGTGATTAACACGAGATCCAAGGGCCGAGTAACGCTCGAGTTCGTCTCG ATGGGCACGACGGGCAGTGATGTTGAAGCAGGGTTTGCGAAGCTTCAGGGCGAGGATTTCGAATACTATATGCAAACCTACTCCATAATCCTCGGCCGGAATTCCAAGAAATCCACCGTTGACGTCGACCTGTCCAGCCTCGGCGGCGGCATGAATATTTCCCGCCACCACGCTCGTATTTTCTACGATTTCACGAGGCGGCGATTTGCCCTAGAAGTGCTCGGAAAAAATGGCTGCCTCGTTGAAGGAGTTCTTCATCTGCCCGGAAACGCGCCGGTCAAGCTCGATTCTCAAGATCTTCTTCAGATTGGGGATAAGGAGTTCTATTTCTTGTTGCCGGTGAGGAATATTTTGGGTGCCTCGGTTGGGGCGAGGAGCCATTTAGGTCATTCCGGATCGGCGGGGGCGGGTCCTGCGGTGACCGGGGCGGTAGTGCCGCCGCATTCGCACTATAATTTTCATTTGGCTGGCTCTGGAGGAGGCGCTGCTGCAGGGACGACGGGGAAGAAAGGGAAAGGACGAGAGTATTATGAGGAGGGATATGAGGACGAGGATGATATTGGGGGAAGTAGCGGCAAGAAGTTCCGGCGGGATGGATATGGAGCTGGTGGTTCTGGTGGAAAAGTAGGATTTTCCGGCGGAATGGTTTCCATGGACAAGAAGTTAGATGGAAGATCAAGAGTTGAACGAGAAGCTGATAATCAGCTCCTCCAGGAGGAAAAGGACGTCGTATCATCGGTAGCTACCGTGCTGTCTGATCTTTGTGGCCCGGGCGAATGGATGCCTATGGAGAAACTCCACTCTGAGTACCTCAAATCAGAGGATCGGCACGGTTCTGAAGCCAAGGATAAACCATGGTATGGCCTGCTTATGTTGTTGAGAAAATACCCAGAACACTTTGTGATTAACACGAGATCCAAGGGCCGAGTAACGCTCGAGTTCGTCTCG MGTTGSDVEAGFAKLQGEDFEYYMQTYSIILGRNSKKSTVDVDLSSLGGGMNISRHHARIFYDFTRRRFALEVLGKNGCLVEGVLHLPGNAPVKLDSQDLLQIGDKEFYFLLPVRNILGASVGARSHLGHSGSAGAGPAVTGAVVPPHSHYNFHLAGSGGGAAAGTTGKKGKGREYYEEGYEDEDDIGGSSGKKFRRDGYGAGGSGGKVGFSGGMVSMDKKLDGRSRVEREADNQLLQEEKDVVSSVATVLSDLCGPGEWMPMEKLHSEYLKSEDRHGSEAKDKPWYGLLMLLRKYPEHFVINTRSKGRVTLEFVS
BLAST of Cp4.1LG05g00690.1 vs. Swiss-Prot
Match: FHA2_ARATH (FHA domain-containing protein FHA2 OS=Arabidopsis thaliana GN=FHA2 PE=1 SV=1) HSP 1 Score: 383.6 bits (984), Expect = 2.0e-105 Identity = 223/337 (66.17%), Postives = 246/337 (73.00%), Query Frame = 1
BLAST of Cp4.1LG05g00690.1 vs. Swiss-Prot
Match: FHA1_ARATH (FHA domain-containing protein FHA1 OS=Arabidopsis thaliana GN=FHA1 PE=2 SV=1) HSP 1 Score: 254.2 bits (648), Expect = 1.9e-66 Identity = 148/233 (63.52%), Postives = 170/233 (72.96%), Query Frame = 1
BLAST of Cp4.1LG05g00690.1 vs. Swiss-Prot
Match: FHA1_TOBAC (Transcriptional activator FHA1 OS=Nicotiana tabacum GN=FHA1 PE=1 SV=1) HSP 1 Score: 248.4 bits (633), Expect = 1.0e-64 Identity = 140/223 (62.78%), Postives = 154/223 (69.06%), Query Frame = 1
BLAST of Cp4.1LG05g00690.1 vs. Swiss-Prot
Match: FHL1_CANAL (Fork-head transcriptional regulator FHL1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=FHL1 PE=1 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 4.8e-14 Identity = 44/108 (40.74%), Postives = 64/108 (59.26%), Query Frame = 1
BLAST of Cp4.1LG05g00690.1 vs. Swiss-Prot
Match: FHL1_SCHPO (Fork head transcription factor 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=fhl1 PE=3 SV=2) HSP 1 Score: 79.0 bits (193), Expect = 1.1e-13 Identity = 44/102 (43.14%), Postives = 61/102 (59.80%), Query Frame = 1
BLAST of Cp4.1LG05g00690.1 vs. TrEMBL
Match: A0A0A0LE48_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G630270 PE=4 SV=1) HSP 1 Score: 577.4 bits (1487), Expect = 1.1e-161 Identity = 290/332 (87.35%), Postives = 298/332 (89.76%), Query Frame = 1
BLAST of Cp4.1LG05g00690.1 vs. TrEMBL
Match: W9RN77_9ROSA (Fork head transcription factor 1 OS=Morus notabilis GN=L484_007013 PE=4 SV=1) HSP 1 Score: 455.3 bits (1170), Expect = 6.1e-125 Identity = 249/343 (72.59%), Postives = 272/343 (79.30%), Query Frame = 1
BLAST of Cp4.1LG05g00690.1 vs. TrEMBL
Match: A0A067JQX2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17514 PE=4 SV=1) HSP 1 Score: 454.1 bits (1167), Expect = 1.4e-124 Identity = 248/342 (72.51%), Postives = 269/342 (78.65%), Query Frame = 1
BLAST of Cp4.1LG05g00690.1 vs. TrEMBL
Match: A0A0D2Q370_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G231500 PE=4 SV=1) HSP 1 Score: 441.0 bits (1133), Expect = 1.2e-120 Identity = 240/343 (69.97%), Postives = 270/343 (78.72%), Query Frame = 1
BLAST of Cp4.1LG05g00690.1 vs. TrEMBL
Match: A0A061DN57_THECC (Transcriptional activator, putative isoform 1 OS=Theobroma cacao GN=TCM_002843 PE=4 SV=1) HSP 1 Score: 440.3 bits (1131), Expect = 2.0e-120 Identity = 242/348 (69.54%), Postives = 270/348 (77.59%), Query Frame = 1
BLAST of Cp4.1LG05g00690.1 vs. TAIR10
Match: AT3G07220.1 (AT3G07220.1 SMAD/FHA domain-containing protein ) HSP 1 Score: 383.6 bits (984), Expect = 1.1e-106 Identity = 223/337 (66.17%), Postives = 246/337 (73.00%), Query Frame = 1
BLAST of Cp4.1LG05g00690.1 vs. TAIR10
Match: AT3G07260.1 (AT3G07260.1 SMAD/FHA domain-containing protein ) HSP 1 Score: 254.2 bits (648), Expect = 1.0e-67 Identity = 148/233 (63.52%), Postives = 170/233 (72.96%), Query Frame = 1
BLAST of Cp4.1LG05g00690.1 vs. NCBI nr
Match: gi|449453286|ref|XP_004144389.1| (PREDICTED: uncharacterized protein LOC101214494 [Cucumis sativus]) HSP 1 Score: 577.4 bits (1487), Expect = 1.5e-161 Identity = 290/332 (87.35%), Postives = 298/332 (89.76%), Query Frame = 1
BLAST of Cp4.1LG05g00690.1 vs. NCBI nr
Match: gi|659120839|ref|XP_008460374.1| (PREDICTED: uncharacterized protein LOC103499215 [Cucumis melo]) HSP 1 Score: 570.1 bits (1468), Expect = 2.4e-159 Identity = 286/332 (86.14%), Postives = 294/332 (88.55%), Query Frame = 1
BLAST of Cp4.1LG05g00690.1 vs. NCBI nr
Match: gi|703128743|ref|XP_010104173.1| (Fork head transcription factor 1 [Morus notabilis]) HSP 1 Score: 455.3 bits (1170), Expect = 8.7e-125 Identity = 249/343 (72.59%), Postives = 272/343 (79.30%), Query Frame = 1
BLAST of Cp4.1LG05g00690.1 vs. NCBI nr
Match: gi|802716606|ref|XP_012085062.1| (PREDICTED: uncharacterized protein LOC105644363 [Jatropha curcas]) HSP 1 Score: 454.1 bits (1167), Expect = 1.9e-124 Identity = 248/342 (72.51%), Postives = 269/342 (78.65%), Query Frame = 1
BLAST of Cp4.1LG05g00690.1 vs. NCBI nr
Match: gi|823127101|ref|XP_012492566.1| (PREDICTED: uncharacterized protein LOC105804472 [Gossypium raimondii]) HSP 1 Score: 441.0 bits (1133), Expect = 1.7e-120 Identity = 240/343 (69.97%), Postives = 270/343 (78.72%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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