Cp4.1LG04g12160.1 (mRNA) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG04g12160.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	mago nashi family protein
Location	Cp4.1LG04 : 8377390 .. 8380505 (+)
Sequence length	1140

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAATGGAAAAATCCCTAAAAACAACTCTCTCGTGACTCGCACGTGCTCCACGCACCTTCTTCCCCACGCCGTTACCTCCTCCGTTTCAGCAGCTCAGCGGCGCCATCGCCGTCGGCAATTCTCTTATATATAACGGATATATTCGAGTCGCTGAGGCTGCGCGGGAGAGAAAGAAGGTTTACTGCGGGTGCCATGGCGGCCGAGGATATGGAGAATGGTGAGTTTTACTTGAGATATTATGTAGGGCACAAAGGAAAATTTGGGCACGAGTTCTTGGAGTTCGAATTCCGACCTGATGGCAAGCTTCGCTACGCTAACAACTCCAATTACAAGAACGATACGATGATTCGCAAGGAAGTCTACCTCACTCCTGCTGTTCTCCGGGAATGCCGTCGAATAATCTCCGATAGCGAGGTTAGGGTTTCCTTTGCATAACCATTTTTAGGGTTTTCTTTTGTTTACTTTGAGATTATGTTTCTCTGCTGCATTGCTTCTGTTTATTTTGTGAATTCTTTTTCTCCTCTACTTTTGAAATACTCTATGAACATAGCAATATCGGCTTTTCATCTTCACCAGCCAACCCTGAACCCCCGTAGACTCTTCGGCTTTTCAATATCGACTACTTTTTTCCTTCATGAAATCCATTTGACAATAATGTTTCTTTAAGAAGAGATTCAGCTAATACCAAATGGTTACCCACCCAGCTTTGTTGAATTGACCTAGAATGTGGATATACATTATCTTCCACCTGTGCTAGCCGAAATCTAGTGTTCCACGTGCCATCGCAAATCTATCTTGGACATAAAAACTTCAATGGATTGGATTATGCATCAAATCAACCATGGATTTCTCAATCCAAATGAGATGGGCTAATTCAATAGGTAACGAATCTTTTCTATTCAGTTCCTCTATGGAAAAATGATCATTTTCAAACCATTTAAAGTAAATTTTATTCTGAATACAACAGTTGCTTAAATCCATAATGCTTGAACACAAAGAAACTTGGAAGAGCTGAACTGGAAAAAGGAAGGAAATACGCTTGAACACTTAATTGGTCAGAGTTGATCAGGGAGAAAATCCTTAAAGACTTAAAATATAATCACTCTGATGCAAAGATTCCTCATTTTTAACAGTGGTATAATGTTGTTTGACCTTAGGCTGAAGGGAAATTAAAAAGGATTCACAACTTTATGGAGATTGTTGAGCTTGATAGTATTGTCACTTGAAAAAGGAGCATGTTACTGACTAGTTGACGACGAGTGATGTGAATAGTGTCATTATCAACAATGATTCTTTAGAGGCTACCATCTCAGAAGCCTTTGTCAAGTGAACTATTTAGAGTAGCCACCTCTTAGGCAAAATGGAAGGCAAGGGGGTGCACCTTGCTTAAGACGTCTTGAAACTTTAATCTAAAACCTCTCAGCTTTCCATTACGGAAGAGCAAGAAAGTACTGCAATCCCATTAGAACGTGCTCTTTGATGCTGTTCCAATTCTTCAAGATTCCTCCAGTAGCCATTCAGGACGTGAATTTTGTCAAGGCCAAAACTATGAAGTGCGGCTTTCTTTCATGCCATAGGCACTCCAAACAAGGAATGGGCTCCATAGGTGAAAGGGATCCTTTTCTTATTATCATCAAGCATATGGGACAACTAATCTAATTAGATTTAAGGGGGGGGATATACTACTAAAGATATTTGGTTGCCTGTAGATTTGTAGCGAATTAGTTTTTAAATTGAAAGGCGTATGAACAGATTGGAAAATGATTCAAAGTGGTAAGAAGCATTCTTTCAACTCTTGGAAGATGAAGTTTGATATTCTGTGCTAGTTTAATAAAAAAAATCAGTTGATCCCTATTGTTGGTGACCAATTGAAATCACCATTTTATGAAGGGAGATCAATCAAAGAAAGGCCATCAATAAACTTATTGAAGTATCAACAATGCACCATCTACTAATAATGAAGATCTCTTGCGACTCCATCTAGTAATAATGAAGTCATCACCAATGCACCACACCTTGCACTATAGTTAGAAAGAGCCTCAAGCTGTCTCAAAAATAATATTTCAAAAGACTCTTACCTCATTAGACTAATTAAAAAAAAGTCTGATGTTCATATGTTGTCGCTGAATTCGGTTTCTCATAGATCTGATCTATCACCCCCCTTTCCCAAGCTATGCAAAAGAGGATGAGATTATTTTACTATTTGGATTTTGAACGTCTTCAATTATTTTCTTCCTTTCTGAATAAAATGTTACGTTCCCAATGCGATTGAGACGAGTCTTCTTTGGTTCCTCCCGTATTTTCTTTCTCCTTGATGTATTTGACAAAGAGTGTTTTGAAATTGAATCTGTTTGTCAGTTGCTTTATTTTATCTCCTTTTGGAACTTGTCTCTGTTCAGATTATGAAGGAAGATGACAATAATTGGCCAGAACCCGATCGGGTTGGACGACAGGAGCTGGAGATTGTGATGGGAAACGAGCATATCTCCTTTACTACATCTAAGATTGGATCTCTTGTTGATGTGCAAAGCAGCAAGGATCCTGAAGGATTGCGGATATTCTATTATCTTGTTCAGGTAAATCTTAATTCTCTGTGTAGATTACTTAAACATGGAAGGTTTCTATCTGTCTTTTAGGCCGTCTCTGTCTCTAGATTCTTGAGTATTATATGCATTATCAAGCTTAGATCATATGTGCGTTTTCTTTGGCTGTAGGATCTGAAATGCTTTGTATTTTCTCTCATTTCACTCCACTACAAGATCAAGCCAATTTAAAGACGGCCCAAAATTCCTAGTGTGCAATCTGAGGAACATGTACTTCTCCTAACTGTGAAATCTTTTTTTGGGCATTTTTTGAACTGCAAAATTCGGGATTCAGAATCGTTATTGTTTTTAGAGTTCTCTCTTCTGGATTTCATGTACATGCAGACGATGGGCGTTGTATGACCTTTATTTTAATTAGAATATCTCCTGGATAGATAGAATGCCGGCTGATGGCATGTGCATGCTTTCTTTTTTCAGCTTAGAATATGCTTTCCTTTCATGAAACTGTAATTAAATTTGAAGTTTCCTGATTAAAATTTGGATGATAGGTGTGATGTCACAATCACACTTTAG

mRNA sequence

TAATGGAAAAATCCCTAAAAACAACTCTCTCGTGACTCGCACGTGCTCCACGCACCTTCTTCCCCACGCCGTTACCTCCTCCGTTTCAGCAGCTCAGCGGCGCCATCGCCGTCGGCAATTCTCTTATATATAACGGATATATTCGAGTCGCTGAGGCTGCGCGGGAGAGAAAGAAGGTTTACTGCGGGTGCCATGGCGGCCGAGGATATGGAGAATGGTGAGTTTTACTTGAGATATTATGTAGGGCACAAAGGAAAATTTGGGCACGAGTTCTTGGAGTTCGAATTCCGACCTGATGGCAAGCTTCGCTACGCTAACAACTCCAATTACAAGAACGATACGATGATTCGCAAGGAAGTCTACCTCACTCCTGCTGTTCTCCGGGAATGCCGTCGAATAATCTCCGATAGCGAGATTCCTCCAGTAGCCATTCAGGACGTGAATTTTGTCAAGGCCAAAACTATGAAGTGCGGCTTTCTTTCATGCCATAGGCACTCCAAACAAGGAATGGGCTCCATAGTTGCTTTATTTTATCTCCTTTTGGAACTTGTCTCTGTTCAGATTATGAAGGAAGATGACAATAATTGGCCAGAACCCGATCGGGTTGGACGACAGGAGCTGGAGATTGTGATGGGAAACGAGCATATCTCCTTTACTACATCTAAGATTGGATCTCTTGTTGATGTGCAAAGCAGCAAGGATCCTGAAGGATTGCGGATATTCTATTATCTTGTTCAGGATCTGAAATGCTTTGTATTTTCTCTCATTTCACTCCACTACAAGATCAAGCCAATTTAAAGACGGCCCAAAATTCCTAGTGTGCAATCTGAGGAACATGTACTTCTCCTAACTGTGAAATCTTTTTTTGGGCATTTTTTGAACTGCAAAATTCGGGATTCAGAATCGTTATTGTTTTTAGAGTTCTCTCTTCTGGATTTCATGTACATGCAGACGATGGGCGTTGTATGACCTTTATTTTAATTAGAATATCTCCTGGATAGATAGAATGCCGGCTGATGGCATGTGCATGCTTTCTTTTTTCAGCTTAGAATATGCTTTCCTTTCATGAAACTGTAATTAAATTTGAAGTTTCCTGATTAAAATTTGGATGATAGGTGTGATGTCACAATCACACTTTAG

Coding sequence (CDS)

ATGGCGGCCGAGGATATGGAGAATGGTGAGTTTTACTTGAGATATTATGTAGGGCACAAAGGAAAATTTGGGCACGAGTTCTTGGAGTTCGAATTCCGACCTGATGGCAAGCTTCGCTACGCTAACAACTCCAATTACAAGAACGATACGATGATTCGCAAGGAAGTCTACCTCACTCCTGCTGTTCTCCGGGAATGCCGTCGAATAATCTCCGATAGCGAGATTCCTCCAGTAGCCATTCAGGACGTGAATTTTGTCAAGGCCAAAACTATGAAGTGCGGCTTTCTTTCATGCCATAGGCACTCCAAACAAGGAATGGGCTCCATAGTTGCTTTATTTTATCTCCTTTTGGAACTTGTCTCTGTTCAGATTATGAAGGAAGATGACAATAATTGGCCAGAACCCGATCGGGTTGGACGACAGGAGCTGGAGATTGTGATGGGAAACGAGCATATCTCCTTTACTACATCTAAGATTGGATCTCTTGTTGATGTGCAAAGCAGCAAGGATCCTGAAGGATTGCGGATATTCTATTATCTTGTTCAGGATCTGAAATGCTTTGTATTTTCTCTCATTTCACTCCACTACAAGATCAAGCCAATTTAA

Protein sequence

MAAEDMENGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVYLTPAVLRECRRIISDSEIPPVAIQDVNFVKAKTMKCGFLSCHRHSKQGMGSIVALFYLLLELVSVQIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFSLISLHYKIKPI

Homology

[Close]

BLAST of Cp4.1LG04g12160.1 vs. Swiss-Prot
Match: MGN_ORYSJ (Protein mago nashi homolog OS=Oryza sativa subsp. japonica GN=Os12g0287200 PE=2 SV=2)

HSP 1 Score: 159.5 bits (402), Expect = 3.9e-38
Identity = 75/79 (94.94%), Postives = 79/79 (100.00%), Query Frame = 1


Query: 123 QIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQ 182
           +IMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQ+SKDPEGLRIFYYLVQ
Sbjct: 80  EIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQTSKDPEGLRIFYYLVQ 139

Query: 183 DLKCFVFSLISLHYKIKPI 202
           DLKCFVFSLI+LH+KIKPI
Sbjct: 140 DLKCFVFSLINLHFKIKPI 158

[Close]

BLAST of Cp4.1LG04g12160.1 vs. Swiss-Prot
Match: MGN_ARATH (Protein mago nashi homolog OS=Arabidopsis thaliana GN=At1g02140 PE=1 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 2.4e-35
Identity = 70/79 (88.61%), Postives = 75/79 (94.94%), Query Frame = 1


Query: 123 QIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQ 182
           +I+KEDDNNWPEPDRVG+QELEIV+GNEHISF TSKIGSLVD QSS DPEGLRIFYYLVQ
Sbjct: 72  EILKEDDNNWPEPDRVGKQELEIVLGNEHISFATSKIGSLVDCQSSNDPEGLRIFYYLVQ 131

Query: 183 DLKCFVFSLISLHYKIKPI 202
           DLKC VFSLISLH+KIKPI
Sbjct: 132 DLKCLVFSLISLHFKIKPI 150

[Close]

BLAST of Cp4.1LG04g12160.1 vs. Swiss-Prot
Match: MGN_EUPLA (Protein mago nashi homolog OS=Euphorbia lagascae PE=2 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 3.1e-35
Identity = 72/79 (91.14%), Postives = 75/79 (94.94%), Query Frame = 1


Query: 123 QIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQ 182
           +IMKEDD NWP PDRVGRQELEIVMGNE+ISFTTSKIGSLVDVQ SKDPEGLRIFYYLV 
Sbjct: 71  EIMKEDDANWPGPDRVGRQELEIVMGNEYISFTTSKIGSLVDVQRSKDPEGLRIFYYLVH 130

Query: 183 DLKCFVFSLISLHYKIKPI 202
           DLKCFVFSLISLH+KIKPI
Sbjct: 131 DLKCFVFSLISLHFKIKPI 149

[Close]

BLAST of Cp4.1LG04g12160.1 vs. Swiss-Prot
Match: MGN2_MOUSE (Protein mago nashi homolog 2 OS=Mus musculus GN=Magohb PE=2 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 5.5e-32
Identity = 65/79 (82.28%), Postives = 71/79 (89.87%), Query Frame = 1


Query: 123 QIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQ 182
           +I KEDD  WP PDRVGRQELEIV+G+EHISFTTSKIGSL+DV  SKDPEGLR+FYYLVQ
Sbjct: 68  EITKEDDALWPPPDRVGRQELEIVIGDEHISFTTSKIGSLIDVNQSKDPEGLRVFYYLVQ 127

Query: 183 DLKCFVFSLISLHYKIKPI 202
           DLKC VFSLI LH+KIKPI
Sbjct: 128 DLKCLVFSLIGLHFKIKPI 146

[Close]

BLAST of Cp4.1LG04g12160.1 vs. Swiss-Prot
Match: MGN2_BOVIN (Protein mago nashi homolog 2 OS=Bos taurus GN=MAGOHB PE=2 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 5.5e-32
Identity = 65/79 (82.28%), Postives = 71/79 (89.87%), Query Frame = 1


Query: 123 QIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQ 182
           +I KEDD  WP PDRVGRQELEIV+G+EHISFTTSKIGSL+DV  SKDPEGLR+FYYLVQ
Sbjct: 70  EITKEDDALWPPPDRVGRQELEIVIGDEHISFTTSKIGSLIDVNQSKDPEGLRVFYYLVQ 129

Query: 183 DLKCFVFSLISLHYKIKPI 202
           DLKC VFSLI LH+KIKPI
Sbjct: 130 DLKCLVFSLIGLHFKIKPI 148

[Close]

BLAST of Cp4.1LG04g12160.1 vs. TrEMBL
Match: A0A078FS81_BRANA (BnaC05g00070D protein OS=Brassica napus GN=BnaC05g00070D PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 2.6e-57
Identity = 121/195 (62.05%), Postives = 134/195 (68.72%), Query Frame = 1


Query: 7   ENGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVYLTPAVLREC 66
           E  EFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEV          
Sbjct: 3   EANEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEV---------- 62

Query: 67  RRIISDSEIPPVAIQDVNFVKAKTMKCGFLSCHRHSKQGMGSIVALFYLLLELVSVQIMK 126
                   + P  +++   + +++                          + ++ + IMK
Sbjct: 63  -------FLTPAVLKECKRIVSESES------------------------IRVLCIYIMK 122

Query: 127 EDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKC 186
           EDD  WPEPDRVGRQELEIVMGNEHISF TSKIGSLVDVQSS DPEGLRIFYYLVQDLKC
Sbjct: 123 EDDFKWPEPDRVGRQELEIVMGNEHISFATSKIGSLVDVQSSDDPEGLRIFYYLVQDLKC 156

Query: 187 FVFSLISLHYKIKPI 202
            VFSLISLH+KIKPI
Sbjct: 183 LVFSLISLHFKIKPI 156

[Close]

BLAST of Cp4.1LG04g12160.1 vs. TrEMBL
Match: A0A0M3IYB7_ANISI (Uncharacterized protein OS=Anisakis simplex PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 4.7e-54
Identity = 112/201 (55.72%), Postives = 134/201 (66.67%), Query Frame = 1


Query: 1   MAAEDMENGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVYLTP 60
           M +     G FYLRYYVGH+GKFGHEFLEFEFRPDGKLRYANNS YKNDT+IRKE Y++ 
Sbjct: 1   MPSSGDSEGGFYLRYYVGHRGKFGHEFLEFEFRPDGKLRYANNSQYKNDTLIRKEAYVSK 60

Query: 61  AVLRECRRIISDSEIPPVAIQDVNFVKAKTMKCGFLSCHRHSKQGMGSIVALFYLLLELV 120
            V+ E +RI+ DSEI   ++Q   F+     +  F +  R                    
Sbjct: 61  LVMDELKRIVEDSEILQASLQSY-FISNFPDEDNFNTISRDD------------------ 120

Query: 121 SVQIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYL 180
                 EDD +WPEPDR+GRQELEI+  + HISF TSKIGS  DV +S+DP+GLR FYYL
Sbjct: 121 -----DEDDASWPEPDRIGRQELEILYNDVHISFATSKIGSAADVSNSQDPDGLRSFYYL 177

Query: 181 VQDLKCFVFSLISLHYKIKPI 202
           VQDLKC VFSLI +H+KIKPI
Sbjct: 181 VQDLKCLVFSLIGMHFKIKPI 177

[Close]

BLAST of Cp4.1LG04g12160.1 vs. TrEMBL
Match: A0A0K9NUD9_ZOSMR (Protein mago nashi OS=Zostera marina GN=ZOSMA_5G02790 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 6.1e-54
Identity = 118/192 (61.46%), Postives = 128/192 (66.67%), Query Frame = 1


Query: 10  EFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVYLTPAVLRECRRI 69
           EFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKND                    
Sbjct: 27  EFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKND-------------------- 86

Query: 70  ISDSEIPPVAIQDVNFVKAKTMKCGFLSCHRHSKQGMGSIVALFYLLLELVSVQIMKEDD 129
                     I+   FV A  ++     C R   +                  +IM+EDD
Sbjct: 87  --------TIIRKEVFVTASVLR----ECRRVISES-----------------EIMREDD 146

Query: 130 NNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVF 189
           NNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQ+SKDPEGLRIFYYLVQDLKC VF
Sbjct: 147 NNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQTSKDPEGLRIFYYLVQDLKCLVF 169

Query: 190 SLISLHYKIKPI 202
           SLI+L++KIKPI
Sbjct: 207 SLIALNFKIKPI 169

[Close]

BLAST of Cp4.1LG04g12160.1 vs. TrEMBL
Match: B7FAC2_ORYSJ (Os08g0107900 protein OS=Oryza sativa subsp. japonica GN=Os08g0107900 PE=2 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 9.1e-50
Identity = 112/174 (64.37%), Postives = 118/174 (67.82%), Query Frame = 1


Query: 9   GEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVYLTPAVLRECRR 68
           GEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYK DTMIRKEV            
Sbjct: 13  GEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKKDTMIRKEV------------ 72

Query: 69  IISDSEIPPVAIQDVNFVKAKTMKCGFLSCHRHSKQGMGSIVALFYLLLELVSVQIMKED 128
                           FV    ++      H        S + L Y+L      QIMKED
Sbjct: 73  ----------------FVSPSVLREATRIIHE-------SEMGLVYIL------QIMKED 132

Query: 129 DNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQ 183
           D+NWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQ+SKDPEGLRIFYYLVQ
Sbjct: 133 DSNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQTSKDPEGLRIFYYLVQ 145

[Close]

BLAST of Cp4.1LG04g12160.1 vs. TrEMBL
Match: A0A0P6B4D7_9CRUS (Mago nashi (Fragment) OS=Daphnia magna PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 1.1e-47
Identity = 112/191 (58.64%), Postives = 128/191 (67.02%), Query Frame = 1


Query: 13  LRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVYLTPAVLRECRRIISD 72
           LRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKE Y+  +VL E +RII D
Sbjct: 3   LRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEAYVHQSVLNELKRIIED 62

Query: 73  SEIPPVAIQDVNFVKAKTMKCGFLSCHRHSKQGMGSIVALFYL--LLELVSVQIMKEDDN 132
           SEI    +Q+ + +     + G     +  +  MG     F    +  LV V   K+   
Sbjct: 63  SEI----LQEDDSLWPTPDRVG----RQELEIVMGDEHISFSTSKIGSLVDVNQSKDAXX 122

Query: 133 NWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFS 192
                       LEIVMG+EHISF+TSKIGSLVDV  SKD +GLR FYYLVQDLKC VFS
Sbjct: 123 XXXXXXXXXXXXLEIVMGDEHISFSTSKIGSLVDVNQSKDADGLRAFYYLVQDLKCLVFS 182

Query: 193 LISLHYKIKPI 202
           LI LH+KIKPI
Sbjct: 183 LIGLHFKIKPI 185

[Close]

BLAST of Cp4.1LG04g12160.1 vs. TAIR10
Match: AT1G02140.1 (AT1G02140.1 mago nashi family protein)

HSP 1 Score: 150.2 bits (378), Expect = 1.3e-36
Identity = 70/79 (88.61%), Postives = 75/79 (94.94%), Query Frame = 1


Query: 123 QIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQ 182
           +I+KEDDNNWPEPDRVG+QELEIV+GNEHISF TSKIGSLVD QSS DPEGLRIFYYLVQ
Sbjct: 72  EILKEDDNNWPEPDRVGKQELEIVLGNEHISFATSKIGSLVDCQSSNDPEGLRIFYYLVQ 131

Query: 183 DLKCFVFSLISLHYKIKPI 202
           DLKC VFSLISLH+KIKPI
Sbjct: 132 DLKCLVFSLISLHFKIKPI 150

[Close]

BLAST of Cp4.1LG04g12160.1 vs. NCBI nr
Match: gi|1002292506|ref|XP_015650604.1| (PREDICTED: protein mago nashi homolog isoform X1 [Oryza sativa Japonica Group])

HSP 1 Score: 240.0 bits (611), Expect = 3.7e-60
Identity = 129/193 (66.84%), Postives = 137/193 (70.98%), Query Frame = 1


Query: 9   GEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVYLTPAVLRECRR 68
           GEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYK DTMIRKEV            
Sbjct: 13  GEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKKDTMIRKEV------------ 72

Query: 69  IISDSEIPPVAIQDVNFVKAKTMKCGFLSCHRHSKQGMGSIVALFYLLLELVSVQIMKED 128
                           FV    ++      H        S + L Y+L      QIMKED
Sbjct: 73  ----------------FVSPSVLREATRIIHE-------SEMGLVYIL------QIMKED 132

Query: 129 DNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFV 188
           D+NWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQ+SKDPEGLRIFYYLVQDLKCFV
Sbjct: 133 DSNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQTSKDPEGLRIFYYLVQDLKCFV 164

Query: 189 FSLISLHYKIKPI 202
           FSLI+LH+KIKPI
Sbjct: 193 FSLINLHFKIKPI 164

[Close]

BLAST of Cp4.1LG04g12160.1 vs. NCBI nr
Match: gi|674917936|emb|CDY15128.1| (BnaC05g00070D [Brassica napus])

HSP 1 Score: 229.9 bits (585), Expect = 3.8e-57
Identity = 121/195 (62.05%), Postives = 134/195 (68.72%), Query Frame = 1


Query: 7   ENGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVYLTPAVLREC 66
           E  EFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEV          
Sbjct: 3   EANEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEV---------- 62

Query: 67  RRIISDSEIPPVAIQDVNFVKAKTMKCGFLSCHRHSKQGMGSIVALFYLLLELVSVQIMK 126
                   + P  +++   + +++                          + ++ + IMK
Sbjct: 63  -------FLTPAVLKECKRIVSESES------------------------IRVLCIYIMK 122

Query: 127 EDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKC 186
           EDD  WPEPDRVGRQELEIVMGNEHISF TSKIGSLVDVQSS DPEGLRIFYYLVQDLKC
Sbjct: 123 EDDFKWPEPDRVGRQELEIVMGNEHISFATSKIGSLVDVQSSDDPEGLRIFYYLVQDLKC 156

Query: 187 FVFSLISLHYKIKPI 202
            VFSLISLH+KIKPI
Sbjct: 183 LVFSLISLHFKIKPI 156

[Close]

BLAST of Cp4.1LG04g12160.1 vs. NCBI nr
Match: gi|901800161|gb|KMZ60411.1| (Protein mago nashi [Zostera marina])

HSP 1 Score: 218.8 bits (556), Expect = 8.8e-54
Identity = 118/192 (61.46%), Postives = 128/192 (66.67%), Query Frame = 1


Query: 10  EFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVYLTPAVLRECRRI 69
           EFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKND                    
Sbjct: 27  EFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKND-------------------- 86

Query: 70  ISDSEIPPVAIQDVNFVKAKTMKCGFLSCHRHSKQGMGSIVALFYLLLELVSVQIMKEDD 129
                     I+   FV A  ++     C R   +                  +IM+EDD
Sbjct: 87  --------TIIRKEVFVTASVLR----ECRRVISES-----------------EIMREDD 146

Query: 130 NNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVF 189
           NNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQ+SKDPEGLRIFYYLVQDLKC VF
Sbjct: 147 NNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQTSKDPEGLRIFYYLVQDLKCLVF 169

Query: 190 SLISLHYKIKPI 202
           SLI+L++KIKPI
Sbjct: 207 SLIALNFKIKPI 169

[Close]

BLAST of Cp4.1LG04g12160.1 vs. NCBI nr
Match: gi|215769341|dbj|BAH01570.1| (unnamed protein product [Oryza sativa Japonica Group])

HSP 1 Score: 204.9 bits (520), Expect = 1.3e-49
Identity = 112/174 (64.37%), Postives = 118/174 (67.82%), Query Frame = 1


Query: 9   GEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVYLTPAVLRECRR 68
           GEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYK DTMIRKEV            
Sbjct: 13  GEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKKDTMIRKEV------------ 72

Query: 69  IISDSEIPPVAIQDVNFVKAKTMKCGFLSCHRHSKQGMGSIVALFYLLLELVSVQIMKED 128
                           FV    ++      H        S + L Y+L      QIMKED
Sbjct: 73  ----------------FVSPSVLREATRIIHE-------SEMGLVYIL------QIMKED 132

Query: 129 DNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQ 183
           D+NWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQ+SKDPEGLRIFYYLVQ
Sbjct: 133 DSNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQTSKDPEGLRIFYYLVQ 145

[Close]

BLAST of Cp4.1LG04g12160.1 vs. NCBI nr
Match: gi|564351989|ref|XP_006238572.1| (PREDICTED: protein mago nashi homolog isoform X1 [Rattus norvegicus])

HSP 1 Score: 186.8 bits (473), Expect = 3.7e-44
Identity = 103/192 (53.65%), Postives = 122/192 (63.54%), Query Frame = 1


Query: 10  EFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVYLTPAVLRECRRI 69
           +FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYAN              Y    ++R+    
Sbjct: 4   DFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYAN-----------NSNYKNDVMIRK---- 63

Query: 70  ISDSEIPPVAIQDVNFVKAKTMKCGFLSCHRHSKQGMGSIVALFYLLLELVSVQIMKEDD 129
                       +V    +  +   F   + H      S++     +++    +I KEDD
Sbjct: 64  ------------EVQTFPSLRVSLLFHMAYVHK-----SVMEELKRIID--DSEITKEDD 123

Query: 130 NNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVF 189
             WP PDRVGRQELEIV+G+EHISFTTSKIGSL+DV  SKDPEGLR+FYYLVQDLKC VF
Sbjct: 124 ALWPPPDRVGRQELEIVIGDEHISFTTSKIGSLIDVNQSKDPEGLRVFYYLVQDLKCLVF 161

Query: 190 SLISLHYKIKPI 202
           SLI LH+KIKPI
Sbjct: 184 SLIGLHFKIKPI 161

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g12160.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MGN_ORYSJ	3.9e-38	94.94	Protein mago nashi homolog OS=Oryza sativa subsp. japonica GN=Os12g0287200 PE=2 ...	[more]
MGN_ARATH	2.4e-35	88.61	Protein mago nashi homolog OS=Arabidopsis thaliana GN=At1g02140 PE=1 SV=1	[more]
MGN_EUPLA	3.1e-35	91.14	Protein mago nashi homolog OS=Euphorbia lagascae PE=2 SV=1	[more]
MGN2_MOUSE	5.5e-32	82.28	Protein mago nashi homolog 2 OS=Mus musculus GN=Magohb PE=2 SV=1	[more]
MGN2_BOVIN	5.5e-32	82.28	Protein mago nashi homolog 2 OS=Bos taurus GN=MAGOHB PE=2 SV=1	[more]

BLAST of Cp4.1LG04g12160.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A078FS81_BRANA	2.6e-57	62.05	BnaC05g00070D protein OS=Brassica napus GN=BnaC05g00070D PE=4 SV=1	[more]
A0A0M3IYB7_ANISI	4.7e-54	55.72	Uncharacterized protein OS=Anisakis simplex PE=4 SV=1	[more]
A0A0K9NUD9_ZOSMR	6.1e-54	61.46	Protein mago nashi OS=Zostera marina GN=ZOSMA_5G02790 PE=4 SV=1	[more]
B7FAC2_ORYSJ	9.1e-50	64.37	Os08g0107900 protein OS=Oryza sativa subsp. japonica GN=Os08g0107900 PE=2 SV=1	[more]
A0A0P6B4D7_9CRUS	1.1e-47	58.64	Mago nashi (Fragment) OS=Daphnia magna PE=4 SV=1	[more]

BLAST of Cp4.1LG04g12160.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G02140.1	1.3e-36	88.61	mago nashi family protein	[more]

BLAST of Cp4.1LG04g12160.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|1002292506\|ref\|XP_015650604.1\|	3.7e-60	66.84	PREDICTED: protein mago nashi homolog isoform X1 [Oryza sativa Japonica Group]	[more]
gi\|674917936\|emb\|CDY15128.1\|	3.8e-57	62.05	BnaC05g00070D [Brassica napus]	[more]
gi\|901800161\|gb\|KMZ60411.1\|	8.8e-54	61.46	Protein mago nashi [Zostera marina]	[more]
gi\|215769341\|dbj\|BAH01570.1\|	1.3e-49	64.37	unnamed protein product [Oryza sativa Japonica Group]	[more]
gi\|564351989\|ref\|XP_006238572.1\|	3.7e-44	53.65	PREDICTED: protein mago nashi homolog isoform X1 [Rattus norvegicus]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **INTERPRO**
Term	Definition
IPR004023	Mago_nashi

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048856	anatomical structure development
biological_process	GO:0003006	developmental process involved in reproduction
biological_process	GO:0032501	multicellular organismal process
biological_process	GO:0044699	single-organism process
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005654	nucleoplasm
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG04g12160	Cp4.1LG04g12160	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG04g12160.1	Cp4.1LG04g12160.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG04g12160.1:five_prime_utr:001	Cp4.1LG04g12160.1:five_prime_utr:001	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG04g12160.1:cds:004	Cp4.1LG04g12160.1:cds:004	CDS
Cp4.1LG04g12160.1:cds:003	Cp4.1LG04g12160.1:cds:003	CDS
Cp4.1LG04g12160.1:cds:002	Cp4.1LG04g12160.1:cds:002	CDS
Cp4.1LG04g12160.1:cds:001	Cp4.1LG04g12160.1:cds:001	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG04g12160.1:three_prime_utr:001	Cp4.1LG04g12160.1:three_prime_utr:001	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004023	Mago nashi protein	GENE3D	G3DSA:3.30.1560.10		coord: 8..75 score: 1.7E-34coord: 122..201 score: 1.2
IPR004023	Mago nashi protein	PANTHER	PTHR12638	FAMILY NOT NAMED	coord: 127..201 score: 4.9E-124coord: 1..77 score: 4.9E
IPR004023	Mago nashi protein	PFAM	PF02792	Mago_nashi	coord: 11..76 score: 2.8E-33coord: 121..201 score: 6.0
IPR004023	Mago nashi protein	unknown	SSF89817	Mago nashi protein	coord: 9..76 score: 2.22E-32coord: 121..201 score: 9.94