Cp4.1LG04g11660.1 (mRNA) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG04g11660.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Calmodulin
Location	Cp4.1LG04 : 8773999 .. 8776243 (+)
Sequence length	1264

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGCGCGCTATGTTCCTCGGCGGAGAGCGAATCTGACACGTGCGGCCTTCCCGATTTCCACAGCACTTCGTTTATGCGATTTTTTTTTATTCCATTTCTTTTCGCCAAAAATTATATCAGATCGACTTTTTCGCTTCGTTCTGGAAAACCCTCCGTGGATTGGATTCTCGTTGATTTTCTCTTCCTCTTACATCGACGACCATGGCCGAACAACTCACTGATGATCAGATCTCCGAGTTTAAGGAGGCGTTCAGCCTCTTCGACAAGGATGGCGATGGTCGATTTCTTTTTTATTTCTTCGTTTTTTTTTTTTTTGGATTATTCTTGGTTTGATGCGGTTTTGAGCTTTGTTTTCTTTAGATCTGACTGTTTGTTTTGTTGTGTTGGCGGTGTTTTGTGCTTGATCTAGAGTTTAGGTTGTTTTGGTTGCGGGATGGATTGGATTTTGCTACTGGTTTGGGTGACTTTTTAGTGAGGATTAAGTGTTGTGGATTTGGATCTGGTGTGATCTCGTTGTTGCGTGTTCGAGTGTGCTCTCTCTATTTGGTTGTTGATTATATTTGTTTTTTTGGAGCTCTTTTTGGATGGCGATCTTTTAATAATGTGTTGGAGAGTTGTTTTCATGAAATGATTCTCCACGGTTCGTGGCCGATGATGTTTGCGTTCTCTTGTTTGGTGTGCATGAACGAGTTTTTCTCGTGGTAATTAAGATGTGTGATGTGATACGGTAATTGGATTTTTTGGAATGAGAAAAAGTGTTGTTGCTCATTTTCGTTTGTTTCATAGTGATTTAACAGCTTGAACTGGAGTTTGTTTGAAAGATTAGTGTTGCATTCTAATTACTTGTCAACTCCGATGAGTTGATTTATTGATGGATGTGATTTTGCAACTGTTGTTGCTGGCGAAACTATTGCAAGAGGTTTGAGTGCACATTTATACCTGCCCTTGGTATGCTAGAAATGCCTATGGTGTTTAATTTAGGTTTGAATTTCAGTTATTTGCTGAATAATATAAATGGAAATGATACTTTTGATCTCCTTTGCTTTCTACAATCTTCGGAATTTCTTATTTGAACTTTGACTAGATTTATGTTTCATTCTTGTCAATCTCTTGAAACCAATTTCTTATCTAATAATTATCAACCCCTGTCCCTCTATGTTTTATAAATTTGTTCTTCCCCTTATCTTTCTTGGCTTCTTTTTAGGACATTTCGATCTGATCCTATGATATAAGATAATTTTACATTGGGATGATGCAGGCTGTATCACCACCAAGGAGCTTGGGACTGTGATGAGATCACTTGGCCAAAATCCTACTGAAGCTGAGCTGCAGGACATGATCAATGAGGTGGATGCTGATGGGAACGGAACCATCGACTTCCCCGAGTTCCTGAATCTGATGGCCCGTAAGATGAAAGACACTGACTCAGAGGAGGAACTGAAGGAAGCCTTCCGTGTGTTCGACAAGGACCAGAATGGTTTCATCTCTGCAGCTGAACTCCGCCATGTGATGACAAATCTCGGTGAGAAATTGACTGATGAAGAAGTCGATGAGATGATCCGCGAGGCTGACGTGGATGGCGATGGCCAGATTAACTACGAGGAATTCGTTAAAATCATGATGGCTAAGTGAGAGATTGACAACATGAAAAGGGAGGAACCTTATAGAGGCTAAGAACCGAGAGAGAGGTTAGCGCAAAAACTATATAATATCCTACTGGAGCAATTCAATCTAGGATGCTTCTTCTTCGTGATACTAGCTTTAGTTGGTTCTCTCTTGTTTGCAGAATTTATGGTACTGTATTCCGGTATTGTTTGCTGTGTCTTTTTTTTTTTCTCTTCTTTTCTTTCCTTTTTCAGTAGATTAGATAGTGGGGTCTTCTATCATTAATATTTGCTGTTTTCTTTGCTGTGTTCTTTTGTTCCCCAAGTTGTATTTCGACCTGTTGTTAATGCTTGAATATTTATTGGGTGGGATTTTCTTTGATCACATGGCTTCCCAAGATGTAACGTCCTCGAACATAGGGCTATATCGCCCCCATCTTCGAGGCATAAACTTGCAGGTGGCTAATATGCATCTTAAGTAGGCGACCATCATAACTTGAAACTACTCGTTTTACTACTTAGTGTTGATCTTGATATCAATATAGATTCAACTCTGTTATGGTACTTGCAAATATGAAAAGATAAATCACGATTCAATTCCTAATCCTCTTCATCTATGAGACAAAAAAGTTTGGTGTTGC

mRNA sequence

TGGCGCGCTATGTTCCTCGGCGGAGAGCGAATCTGACACGTGCGGCCTTCCCGATTTCCACAGCACTTCGTTTATGCGATTTTTTTTTATTCCATTTCTTTTCGCCAAAAATTATATCAGATCGACTTTTTCGCTTCGTTCTGGAAAACCCTCCGTGGATTGGATTCTCGTTGATTTTCTCTTCCTCTTACATCGACGACCATGGCCGAACAACTCACTGATGATCAGATCTCCGAGTTTAAGGAGGCGTTCAGCCTCTTCGACAAGGATGGCGATGGCTGTATCACCACCAAGGAGCTTGGGACTGTGATGAGATCACTTGGCCAAAATCCTACTGAAGCTGAGCTGCAGGACATGATCAATGAGGTGGATGCTGATGGGAACGGAACCATCGACTTCCCCGAGTTCCTGAATCTGATGGCCCGTAAGATGAAAGACACTGACTCAGAGGAGGAACTGAAGGAAGCCTTCCGTGTGTTCGACAAGGACCAGAATGGTTTCATCTCTGCAGCTGAACTCCGCCATGTGATGACAAATCTCGGTGAGAAATTGACTGATGAAGAAGTCGATGAGATGATCCGCGAGGCTGACGTGGATGGCGATGGCCAGATTAACTACGAGGAATTCGTTAAAATCATGATGGCTAAGTGAGAGATTGACAACATGAAAAGGGAGGAACCTTATAGAGGCTAAGAACCGAGAGAGAGGTTAGCGCAAAAACTATATAATATCCTACTGGAGCAATTCAATCTAGGATGCTTCTTCTTCGTGATACTAGCTTTAGTTGGTTCTCTCTTGTTTGCAGAATTTATGGTACTGTATTCCGGTATTGTTTGCTGTGTCTTTTTTTTTTTCTCTTCTTTTCTTTCCTTTTTCAGTAGATTAGATAGTGGGGTCTTCTATCATTAATATTTGCTGTTTTCTTTGCTGTGTTCTTTTGTTCCCCAAGTTGTATTTCGACCTGTTGTTAATGCTTGAATATTTATTGGGTGGGATTTTCTTTGATCACATGGCTTCCCAAGATGTAACGTCCTCGAACATAGGGCTATATCGCCCCCATCTTCGAGGCATAAACTTGCAGGTGGCTAATATGCATCTTAAGTAGGCGACCATCATAACTTGAAACTACTCGTTTTACTACTTAGTGTTGATCTTGATATCAATATAGATTCAACTCTGTTATGGTACTTGCAAATATGAAAAGATAAATCACGATTCAATTCCTAATCCTCTTCATCTATGAGACAAAAAAGTTTGGTGTTGC

Coding sequence (CDS)

ATGGCCGAACAACTCACTGATGATCAGATCTCCGAGTTTAAGGAGGCGTTCAGCCTCTTCGACAAGGATGGCGATGGCTGTATCACCACCAAGGAGCTTGGGACTGTGATGAGATCACTTGGCCAAAATCCTACTGAAGCTGAGCTGCAGGACATGATCAATGAGGTGGATGCTGATGGGAACGGAACCATCGACTTCCCCGAGTTCCTGAATCTGATGGCCCGTAAGATGAAAGACACTGACTCAGAGGAGGAACTGAAGGAAGCCTTCCGTGTGTTCGACAAGGACCAGAATGGTTTCATCTCTGCAGCTGAACTCCGCCATGTGATGACAAATCTCGGTGAGAAATTGACTGATGAAGAAGTCGATGAGATGATCCGCGAGGCTGACGTGGATGGCGATGGCCAGATTAACTACGAGGAATTCGTTAAAATCATGATGGCTAAGTGA

Protein sequence

MAEQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKIMMAK

Homology

[Close]

BLAST of Cp4.1LG04g11660.1 vs. Swiss-Prot
Match: CALM1_DAUCA (Calmodulin-1/11/16 OS=Daucus carota GN=CAM-1 PE=2 SV=2)

HSP 1 Score: 293.1 bits (749), Expect = 1.7e-78
Identity = 147/149 (98.66%), Postives = 149/149 (100.00%), Query Frame = 1


Query: 1   MAEQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MA+QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYEEFVKIMMAK 150
           EVDEMIREADVDGDGQINYEEFVK+MMAK
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149

[Close]

BLAST of Cp4.1LG04g11660.1 vs. Swiss-Prot
Match: CALM_LILLO (Calmodulin OS=Lilium longiflorum PE=2 SV=2)

HSP 1 Score: 293.1 bits (749), Expect = 1.7e-78
Identity = 147/149 (98.66%), Postives = 149/149 (100.00%), Query Frame = 1


Query: 1   MAEQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MA+QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYEEFVKIMMAK 150
           EVDEMIREADVDGDGQINYEEFVK+MMAK
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149

[Close]

BLAST of Cp4.1LG04g11660.1 vs. Swiss-Prot
Match: CALM1_PETHY (Calmodulin-1 OS=Petunia hybrida GN=CAM81 PE=1 SV=2)

HSP 1 Score: 293.1 bits (749), Expect = 1.7e-78
Identity = 147/149 (98.66%), Postives = 149/149 (100.00%), Query Frame = 1


Query: 1   MAEQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MA+QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYEEFVKIMMAK 150
           EVDEMIREADVDGDGQINYEEFVK+MMAK
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149

[Close]

BLAST of Cp4.1LG04g11660.1 vs. Swiss-Prot
Match: CALM_BRYDI (Calmodulin OS=Bryonia dioica PE=2 SV=2)

HSP 1 Score: 293.1 bits (749), Expect = 1.7e-78
Identity = 147/149 (98.66%), Postives = 149/149 (100.00%), Query Frame = 1


Query: 1   MAEQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MA+QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYEEFVKIMMAK 150
           EVDEMIREADVDGDGQINYEEFVK+MMAK
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149

[Close]

BLAST of Cp4.1LG04g11660.1 vs. Swiss-Prot
Match: CALM7_ARATH (Calmodulin-7 OS=Arabidopsis thaliana GN=CAM7 PE=1 SV=2)

HSP 1 Score: 293.1 bits (749), Expect = 1.7e-78
Identity = 147/149 (98.66%), Postives = 149/149 (100.00%), Query Frame = 1


Query: 1   MAEQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MA+QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYEEFVKIMMAK 150
           EVDEMIREADVDGDGQINYEEFVK+MMAK
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149

[Close]

BLAST of Cp4.1LG04g11660.1 vs. TrEMBL
Match: A0A0A0M2G5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G600260 PE=4 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 6.5e-77
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1


Query: 1   MAEQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MAEQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MAEQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYEEFVKIMMAK 150
           EVDEMIREADVDGDGQINYEEFVKIMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKIMMAK 149

[Close]

BLAST of Cp4.1LG04g11660.1 vs. TrEMBL
Match: A0A103YFF4_CYNCS (Calcium-binding EF-hand OS=Cynara cardunculus var. scolymus GN=Ccrd_013528 PE=4 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 1.4e-76
Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 1


Query: 1   MAEQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MA+QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYEEFVKIMMAK 150
           EVDEMIREADVDGDGQINYEEFVKIMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKIMMAK 149

[Close]

BLAST of Cp4.1LG04g11660.1 vs. TrEMBL
Match: M0RE63_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 1.4e-76
Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 1


Query: 1   MAEQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MAEQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MAEQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYEEFVKIMMAK 150
           EVDEMIREADVDGDGQINY+EFVKIMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYDEFVKIMMAK 149

[Close]

BLAST of Cp4.1LG04g11660.1 vs. TrEMBL
Match: M0S453_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 1.4e-76
Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 1


Query: 1   MAEQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MAEQLTDDQI+EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MAEQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYEEFVKIMMAK 150
           EVDEMIREADVDGDGQINYEEFVKIMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKIMMAK 149

[Close]

BLAST of Cp4.1LG04g11660.1 vs. TrEMBL
Match: G3MHB1_9ACAR (Uncharacterized protein (Fragment) OS=Amblyomma maculatum PE=2 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 1.9e-76
Identity = 147/149 (98.66%), Postives = 149/149 (100.00%), Query Frame = 1


Query: 1   MAEQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MA+QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 28  MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 87

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE
Sbjct: 88  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 147

Query: 121 EVDEMIREADVDGDGQINYEEFVKIMMAK 150
           EVDEMIREADVDGDGQINYEEFVK+MMAK
Sbjct: 148 EVDEMIREADVDGDGQINYEEFVKVMMAK 176

[Close]

BLAST of Cp4.1LG04g11660.1 vs. TAIR10
Match: AT3G43810.1 (AT3G43810.1 calmodulin 7)

HSP 1 Score: 293.1 bits (749), Expect = 9.6e-80
Identity = 147/149 (98.66%), Postives = 149/149 (100.00%), Query Frame = 1


Query: 1   MAEQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MA+QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYEEFVKIMMAK 150
           EVDEMIREADVDGDGQINYEEFVK+MMAK
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149

[Close]

BLAST of Cp4.1LG04g11660.1 vs. TAIR10
Match: AT2G27030.3 (AT2G27030.3 calmodulin 5)

HSP 1 Score: 292.0 bits (746), Expect = 2.1e-79
Identity = 146/149 (97.99%), Postives = 149/149 (100.00%), Query Frame = 1


Query: 1   MAEQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MA+QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYEEFVKIMMAK 150
           EVDEMI+EADVDGDGQINYEEFVK+MMAK
Sbjct: 121 EVDEMIKEADVDGDGQINYEEFVKVMMAK 149

[Close]

BLAST of Cp4.1LG04g11660.1 vs. TAIR10
Match: AT3G56800.1 (AT3G56800.1 calmodulin 3)

HSP 1 Score: 292.0 bits (746), Expect = 2.1e-79
Identity = 146/149 (97.99%), Postives = 149/149 (100.00%), Query Frame = 1


Query: 1   MAEQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MA+QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYEEFVKIMMAK 150
           EVDEMI+EADVDGDGQINYEEFVK+MMAK
Sbjct: 121 EVDEMIKEADVDGDGQINYEEFVKVMMAK 149

[Close]

BLAST of Cp4.1LG04g11660.1 vs. TAIR10
Match: AT5G21274.1 (AT5G21274.1 calmodulin 6)

HSP 1 Score: 291.6 bits (745), Expect = 2.8e-79
Identity = 146/149 (97.99%), Postives = 149/149 (100.00%), Query Frame = 1


Query: 1   MAEQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MA+QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKL+DE
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLSDE 120

Query: 121 EVDEMIREADVDGDGQINYEEFVKIMMAK 150
           EVDEMIREADVDGDGQINYEEFVK+MMAK
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149

[Close]

BLAST of Cp4.1LG04g11660.1 vs. TAIR10
Match: AT2G41110.2 (AT2G41110.2 calmodulin 2)

HSP 1 Score: 283.1 bits (723), Expect = 9.9e-77
Identity = 146/161 (90.68%), Postives = 149/161 (92.55%), Query Frame = 1


Query: 1   MAEQLTDDQISEFKEAFSLFDKDGD------------GCITTKELGTVMRSLGQNPTEAE 60
           MA+QLTDDQISEFKEAFSLFDKDGD            GCITTKELGTVMRSLGQNPTEAE
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGMLHPPFPSIIVGCITTKELGTVMRSLGQNPTEAE 60

Query: 61  LQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRH 120
           LQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRH
Sbjct: 61  LQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRH 120

Query: 121 VMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKIMMAK 150
           VMTNLGEKLTDEEVDEMI+EADVDGDGQINYEEFVK+MMAK
Sbjct: 121 VMTNLGEKLTDEEVDEMIKEADVDGDGQINYEEFVKVMMAK 161

[Close]

BLAST of Cp4.1LG04g11660.1 vs. NCBI nr
Match: gi|449452704|ref|XP_004144099.1| (PREDICTED: calmodulin-7-like [Cucumis sativus])

HSP 1 Score: 294.7 bits (753), Expect = 9.3e-77
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1


Query: 1   MAEQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MAEQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MAEQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYEEFVKIMMAK 150
           EVDEMIREADVDGDGQINYEEFVKIMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKIMMAK 149

[Close]

BLAST of Cp4.1LG04g11660.1 vs. NCBI nr
Match: gi|729298752|ref|XP_010551920.1| (PREDICTED: calmodulin-7-like [Tarenaya hassleriana])

HSP 1 Score: 293.5 bits (750), Expect = 2.1e-76
Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 1


Query: 1   MAEQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MA+QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYEEFVKIMMAK 150
           EVDEMIREADVDGDGQINYEEFVKIMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKIMMAK 149

[Close]

BLAST of Cp4.1LG04g11660.1 vs. NCBI nr
Match: gi|695062437|ref|XP_009419686.1| (PREDICTED: calmodulin-like [Musa acuminata subsp. malaccensis])

HSP 1 Score: 293.5 bits (750), Expect = 2.1e-76
Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 1


Query: 1   MAEQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MAEQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MAEQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYEEFVKIMMAK 150
           EVDEMIREADVDGDGQINY+EFVKIMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYDEFVKIMMAK 149

[Close]

BLAST of Cp4.1LG04g11660.1 vs. NCBI nr
Match: gi|695002524|ref|XP_009380569.1| (PREDICTED: calmodulin-like [Musa acuminata subsp. malaccensis])

HSP 1 Score: 293.5 bits (750), Expect = 2.1e-76
Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 1


Query: 1   MAEQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MAEQLTDDQI+EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 46  MAEQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 105

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE
Sbjct: 106 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 165

Query: 121 EVDEMIREADVDGDGQINYEEFVKIMMAK 150
           EVDEMIREADVDGDGQINYEEFVKIMMAK
Sbjct: 166 EVDEMIREADVDGDGQINYEEFVKIMMAK 194

[Close]

BLAST of Cp4.1LG04g11660.1 vs. NCBI nr
Match: gi|34304715|gb|AAQ63461.1| (calmodulin 4 [Daucus carota])

HSP 1 Score: 293.1 bits (749), Expect = 2.7e-76
Identity = 147/149 (98.66%), Postives = 149/149 (100.00%), Query Frame = 1


Query: 1   MAEQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MA+QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYEEFVKIMMAK 150
           EVDEMIREADVDGDGQINYEEFVK+MMAK
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g11660.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CALM1_DAUCA	1.7e-78	98.66	Calmodulin-1/11/16 OS=Daucus carota GN=CAM-1 PE=2 SV=2	[more]
CALM_LILLO	1.7e-78	98.66	Calmodulin OS=Lilium longiflorum PE=2 SV=2	[more]
CALM1_PETHY	1.7e-78	98.66	Calmodulin-1 OS=Petunia hybrida GN=CAM81 PE=1 SV=2	[more]
CALM_BRYDI	1.7e-78	98.66	Calmodulin OS=Bryonia dioica PE=2 SV=2	[more]
CALM7_ARATH	1.7e-78	98.66	Calmodulin-7 OS=Arabidopsis thaliana GN=CAM7 PE=1 SV=2	[more]

BLAST of Cp4.1LG04g11660.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M2G5_CUCSA	6.5e-77	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G600260 PE=4 SV=1	[more]
A0A103YFF4_CYNCS	1.4e-76	99.33	Calcium-binding EF-hand OS=Cynara cardunculus var. scolymus GN=Ccrd_013528 PE=4 ...	[more]
M0RE63_MUSAM	1.4e-76	99.33	Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1	[more]
M0S453_MUSAM	1.4e-76	99.33	Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1	[more]
G3MHB1_9ACAR	1.9e-76	98.66	Uncharacterized protein (Fragment) OS=Amblyomma maculatum PE=2 SV=1	[more]

BLAST of Cp4.1LG04g11660.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G43810.1	9.6e-80	98.66	calmodulin 7	[more]
AT2G27030.3	2.1e-79	97.99	calmodulin 5	[more]
AT3G56800.1	2.1e-79	97.99	calmodulin 3	[more]
AT5G21274.1	2.8e-79	97.99	calmodulin 6	[more]
AT2G41110.2	9.9e-77	90.68	calmodulin 2	[more]

BLAST of Cp4.1LG04g11660.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449452704\|ref\|XP_004144099.1\|	9.3e-77	100.00	PREDICTED: calmodulin-7-like [Cucumis sativus]	[more]
gi\|729298752\|ref\|XP_010551920.1\|	2.1e-76	99.33	PREDICTED: calmodulin-7-like [Tarenaya hassleriana]	[more]
gi\|695062437\|ref\|XP_009419686.1\|	2.1e-76	99.33	PREDICTED: calmodulin-like [Musa acuminata subsp. malaccensis]	[more]
gi\|695002524\|ref\|XP_009380569.1\|	2.1e-76	99.33	PREDICTED: calmodulin-like [Musa acuminata subsp. malaccensis]	[more]
gi\|34304715\|gb\|AAQ63461.1\|	2.7e-76	98.66	calmodulin 4 [Daucus carota]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005509	calcium ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR018247	EF_Hand_1_Ca_BS
IPR011992	EF-hand-dom_pair
IPR002048	EF_hand_dom

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006084	acetyl-CoA metabolic process
biological_process	GO:0019722	calcium-mediated signaling
biological_process	GO:0005513	detection of calcium ion
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0010099	regulation of photomorphogenesis
biological_process	GO:0009612	response to mechanical stimulus
cellular_component	GO:0005622	intracellular
molecular_function	GO:0005509	calcium ion binding
molecular_function	GO:0032440	2-alkenal reductase [NAD(P)] activity
molecular_function	GO:0005515	protein binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG04g11660	Cp4.1LG04g11660	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG04g11660.1:five_prime_utr:001	Cp4.1LG04g11660.1:five_prime_utr:001	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG04g11660.1:cds:002	Cp4.1LG04g11660.1:cds:002	CDS
Cp4.1LG04g11660.1:cds:001	Cp4.1LG04g11660.1:cds:001	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG04g11660.1:three_prime_utr:001	Cp4.1LG04g11660.1:three_prime_utr:001	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG04g11660.1	Cp4.1LG04g11660.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 12..73 score: 1.9E-15coord: 83..146 score: 2.6
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 48..76 score: 2.5E-8coord: 12..40 score: 6.9E-8coord: 85..113 score: 3.1E-8coord: 121..149 score: 2.
IPR002048	EF-hand domain	PROFILE	PS50222	EF_HAND_2	coord: 44..79 score: 14.541coord: 81..116 score: 17.554coord: 8..43 score: 16.661coord: 117..149 score: 15
IPR011992	EF-hand domain pair	GENE3D	G3DSA:1.10.238.10		coord: 4..68 score: 4.9E-42coord: 69..147 score: 6.2
IPR011992	EF-hand domain pair	unknown	SSF47473	EF-hand	coord: 2..147 score: 5.59
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 94..106 score: -coord: 21..33 score: -coord: 130..142 score: -coord: 57..69 scor
None	No IPR available	PANTHER	PTHR23050	CALCIUM BINDING PROTEIN	coord: 1..149 score: 4.2E
None	No IPR available	PANTHER	PTHR23050:SF153	CALMODULIN-1-RELATED	coord: 1..149 score: 4.2E