Cp4.1LG04g08580.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGTCTTTCTTTTTCTTTTTTCTCTCTCTACCTCTCGTATCTTCGCCGATCGACGGAACCCAGTCCACCGTCTTCTGCTGCAATCTCACGCCGCCACGCCAACCTCCGTCGTCGTCCGCAGTGCCTTCAACTCTTCTACGCTCGCCGTTGAGGTCTTTTCTTTCTTTTCTTTCTTTTCTTTCTTGTTTCTCTCTTTTTTCTGATTCAATCGATTTCCAAATAGCCTACATTTGTAAAGACTTCGATTGTGAGTTTGTAATCCTCCAAAATTTGACCTGTTCATATCCTGGACTGATTTTTAATTTTTATTTTTGGTTCGAAACAATTTTTAAATCATACTGGAGGTAGATGATTTCTCGTTCCTCCCAAATCTAGGAGTCCAAACAGAAAATGAAAGATTGGCTTCCGGGAGAACTTCTGATATTCCGTAGGGCTTGAACAGTTCTGTGTTTTGTGGTATTAGTTTGAATTTAAAGTGAATTAGGTGTTGGCAGGGTAGGAAGAGTATTTTGTTTTATTAAAAGAGATTTGGTGGAGTTTTTATTTTTTGAAGTATAGAATTAATTGGAATCCTTATCAGTTCGAACTAGATTTCCATTCAAAATATTGGAAGTTTTAAAAGTCCTTGGGTGATCTTGTTATTTCCATGAATGCAATGGATCAATTCAATGCTTCCATGCCCATTCTATTGAATATTTGTATGGAAAGAAGATATCAAAGGATCTTTGAAGTCAAATCTTCAGCTTGGTCGGATCATTTTAAGGTCATGAAATGTAAAGCTTTTAGATGGTATTCGCTGTCTACGTTCTTTTTTGGTAATTCCTTATGACATCATGGATCATCAGAGCAAAGCCCGCATCGACCTTTTATCTAATAAAAGCATCCCTTCCAAAAGTCGGGGTTTGTTTCACGTATTAGCTCTAGAATTACTATGGTTATCCGAGTAGCAAATACCATATAATTGATTTTGTGATGTCCCACATTGGTTGGGAAGGAGAACAAAGCACCCTTTATAAGGGTGTGGAAACCTTCCTCTAGCAGACGCGTTTTAAAGCATTGAGGGAAAGCCCAAAGAGGATAATATCTGCTAGCGGTGGATCTGGGTCGTTACAAATGGTATCAGAGCCAGACACCAGACTATGTGCCAGTGAGGAGGTTGTTCTCCAAAGGGGGTAGACATGAGATGGCAAGACGGTGTGCTAGTAGGGACGCTGGGCCCCAAAGGGGGTGGATTTGGCGGGGGTCCCACATCGATTGGAGAAAGGAAAGAGTGCCAGCGAGGATGTTGGGCCCCAAAGGGGGTGGATTGTGATGTCCCACATTGGTTGGGGAGGAGAACAAAACACCCTTTATAAGGGTGTGGAAACCTTCACCTAGCAGACGCGTTTTAAAGCCTTGAGGGAAAGCCCGAAAGGGAAAGCCCAAAGGAAGATAATATCTGCTAGCGATGGACTTGGGTCGTTACAAATTTAATGAGCCATTTGCAGTTTCACAATTTGAATGAGTTCATACTTAAACATGCATGACTTAAACTTAAAAACTTAAGACCTTCCTCCCTAGAAAAATTGCATCTGATTTGAAACTGATGGGTTTGTTGCAAATCAGATGGGTTTGTTGTCCACAGCAAGAAGAATGGCATGGAGGCAGATTACACTGCAACCATACTCAGCTCCTTTATTTGCTAGATTCTTTTCTAAATCTACCCCATATGTCGGTAAGTGTTTCCTTCACTCTTATTTTCTTTAAAAACTAATTCTCATCTGACCCAGGAATTGAGCCTTATACCTTATTTGTTATCTCTTTATTGAATGAATTTGATACCCAAAGAGGCAGAGCATGATTGTGTAGTAAAGGAAGTGTTCATATCTTCGTATGTCATCCATCATTGGTTTGCTATTATTATTTCCTTGTGAGTGTGTGATCAATAAGATGTAGATGTGCTTGATTTGTTGTCATTTGCGTTGTAGTAAAGGTGGGAATACCAGAGTTTTTAAACGGTGTTGGACATGGGGTTGAGTCACATGTGCCTAAACTTGAATCAGAGATTGGCGATTTCCAGAAGCTGCTTGTTACTCGCACACTTGAGCTAAAAAAACTTGGAATTCCATGCAAACATGTAAGTATTTCCTCAACTCAACATTATTCTTATTATTTGAATGATATGGATTAGCAAGACATAGACATGTTGCACCGCCAAAACAGCTCAAATGATAGCCATAGGCTTTGTATGCAATTATCAAAATGCTTCCATTCTTGTGGTATGTGGCAGAGGAAGCTGATATTGAAGTACACACATAAGTACAGGCTTGGACTATGGAGGCCCCGAGCTGATTTGGTGAAGGCCTGATGGTTTTAACAATGGGTTCATGAGGTGAATTGAATGATTTGGCTGATCCCTGGACCTCAGTTTGAATTGAATTGAATTGAATGATTCTTCATGTTACTGCTTTTTTAATTCTTTCTATGCTAATATAATATGTGCTCTATTCCTTGTCCTTCCTTGCTAATATTTAATCAGCAACTCTTTGTTGGGGTTACATATGTATATGCATACGATTTGATGGTGATCAAGTTGCGATGGTGAACTTAATTTCAAGATATAAGGCTTTCCTATTATAACAGGTTGTTCAAAAGGATTTCCCGTTCTTCTATCAAATATTCTGCTTTTTTTCGGGTACTCGGGTTCAAATACTTATGGACTCGCTGTTTGCTTATTGACTTCATATAATTCAGAAAAGATAATGCATCTAGCAAACTCCCCTCTAACCCGAATGAGCACTCAAATATCTGTCCTA CGTCTTTCTTTTTCTTTTTTCTCTCTCTACCTCTCGTATCTTCGCCGATCGACGGAACCCAGTCCACCGTCTTCTGCTGCAATCTCACGCCGCCACGCCAACCTCCGTCGTCGTCCGCAGTGCCTTCAACTCTTCTACGCTCGCCGTTGAGATGGGTTTGTTGTCCACAGCAAGAAGAATGGCATGGAGGCAGATTACACTGCAACCATACTCAGCTCCTTTATTTGCTAGATTCTTTTCTAAATCTACCCCATATGTCGTAAAGGTGGGAATACCAGAGTTTTTAAACGGTGTTGGACATGGGGTTGAGTCACATGTGCCTAAACTTGAATCAGAGATTGGCGATTTCCAGAAGCTGCTTGTTACTCGCACACTTGAGCTAAAAAAACTTGGAATTCCATGCAAACATAGGAAGCTGATATTGAAGTACACACATAAGTACAGGCTTGGACTATGGAGGCCCCGAGCTGATTTGGTGAAGGCCTGATGGTTTTAACAATGGGTTCATGAGGTGAATTGAATGATTTGGCTGATCCCTGGACCTCAGTTTGAATTGAATTGAATTGAATGATTCTTCATGTTACTGCTTTTTTAATTCTTTCTATGCTAATATAATATGTGCTCTATTCCTTGTCCTTCCTTGCTAATATTTAATCAGCAACTCTTTGTTGGGGTTACATATGTATATGCATACGATTTGATGGTGATCAAGTTGCGATGGTGAACTTAATTTCAAGATATAAGGCTTTCCTATTATAACAGGTTGTTCAAAAGGATTTCCCGTTCTTCTATCAAATATTCTGCTTTTTTTCGGGTACTCGGGTTCAAATACTTATGGACTCGCTGTTTGCTTATTGACTTCATATAATTCAGAAAAGATAATGCATCTAGCAAACTCCCCTCTAACCCGAATGAGCACTCAAATATCTGTCCTA ATGGGTTTGTTGTCCACAGCAAGAAGAATGGCATGGAGGCAGATTACACTGCAACCATACTCAGCTCCTTTATTTGCTAGATTCTTTTCTAAATCTACCCCATATGTCGTAAAGGTGGGAATACCAGAGTTTTTAAACGGTGTTGGACATGGGGTTGAGTCACATGTGCCTAAACTTGAATCAGAGATTGGCGATTTCCAGAAGCTGCTTGTTACTCGCACACTTGAGCTAAAAAAACTTGGAATTCCATGCAAACATAGGAAGCTGATATTGAAGTACACACATAAGTACAGGCTTGGACTATGGAGGCCCCGAGCTGATTTGGTGAAGGCCTGA MGLLSTARRMAWRQITLQPYSAPLFARFFSKSTPYVVKVGIPEFLNGVGHGVESHVPKLESEIGDFQKLLVTRTLELKKLGIPCKHRKLILKYTHKYRLGLWRPRADLVKA
BLAST of Cp4.1LG04g08580.1 vs. TrEMBL
Match: A0A0A0M1A4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G555610 PE=4 SV=1) HSP 1 Score: 186.4 bits (472), Expect = 1.9e-44 Identity = 91/108 (84.26%), Postives = 96/108 (88.89%), Query Frame = 1
BLAST of Cp4.1LG04g08580.1 vs. TrEMBL
Match: M5WR64_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012681mg PE=4 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 3.6e-40 Identity = 85/110 (77.27%), Postives = 94/110 (85.45%), Query Frame = 1
BLAST of Cp4.1LG04g08580.1 vs. TrEMBL
Match: A0A151U4Q1_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_006949 PE=4 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 5.8e-38 Identity = 83/109 (76.15%), Postives = 93/109 (85.32%), Query Frame = 1
BLAST of Cp4.1LG04g08580.1 vs. TrEMBL
Match: A0A061F3U0_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_026782 PE=4 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 7.5e-38 Identity = 82/107 (76.64%), Postives = 90/107 (84.11%), Query Frame = 1
BLAST of Cp4.1LG04g08580.1 vs. TrEMBL
Match: V7BHK7_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G202300g PE=4 SV=1) HSP 1 Score: 163.3 bits (412), Expect = 1.7e-37 Identity = 80/98 (81.63%), Postives = 88/98 (89.80%), Query Frame = 1
BLAST of Cp4.1LG04g08580.1 vs. TAIR10
Match: AT5G26800.1 (AT5G26800.1 FUNCTIONS IN: molecular_function unknown) HSP 1 Score: 146.0 bits (367), Expect = 1.4e-35 Identity = 75/113 (66.37%), Postives = 90/113 (79.65%), Query Frame = 1
BLAST of Cp4.1LG04g08580.1 vs. TAIR10
Match: AT3G05810.1 (AT3G05810.1 FUNCTIONS IN: molecular_function unknown) HSP 1 Score: 132.9 bits (333), Expect = 1.2e-31 Identity = 69/112 (61.61%), Postives = 78/112 (69.64%), Query Frame = 1
BLAST of Cp4.1LG04g08580.1 vs. NCBI nr
Match: gi|449435566|ref|XP_004135566.1| (PREDICTED: uncharacterized protein LOC101215337 [Cucumis sativus]) HSP 1 Score: 186.4 bits (472), Expect = 2.7e-44 Identity = 91/108 (84.26%), Postives = 96/108 (88.89%), Query Frame = 1
BLAST of Cp4.1LG04g08580.1 vs. NCBI nr
Match: gi|659099308|ref|XP_008450534.1| (PREDICTED: uncharacterized protein LOC103492108 [Cucumis melo]) HSP 1 Score: 183.0 bits (463), Expect = 2.9e-43 Identity = 89/108 (82.41%), Postives = 96/108 (88.89%), Query Frame = 1
BLAST of Cp4.1LG04g08580.1 vs. NCBI nr
Match: gi|645244513|ref|XP_008228458.1| (PREDICTED: uncharacterized protein LOC103327871 isoform X1 [Prunus mume]) HSP 1 Score: 172.2 bits (435), Expect = 5.2e-40 Identity = 85/114 (74.56%), Postives = 96/114 (84.21%), Query Frame = 1
BLAST of Cp4.1LG04g08580.1 vs. NCBI nr
Match: gi|595927750|ref|XP_007215093.1| (hypothetical protein PRUPE_ppa012681mg [Prunus persica]) HSP 1 Score: 172.2 bits (435), Expect = 5.2e-40 Identity = 85/110 (77.27%), Postives = 94/110 (85.45%), Query Frame = 1
BLAST of Cp4.1LG04g08580.1 vs. NCBI nr
Match: gi|645244516|ref|XP_008228459.1| (PREDICTED: uncharacterized protein LOC103327871 isoform X2 [Prunus mume]) HSP 1 Score: 169.5 bits (428), Expect = 3.4e-39 Identity = 84/108 (77.78%), Postives = 92/108 (85.19%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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