Cp4.1LG04g07600.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CATCCATCATCCATCTCTCTTCCCTTTTTCGCTCTCCCTATCTCTCTCTCTCTCTCTCTGAAGAGCTTGAAAAAAGGCGACGGCCAAATTGGCGTTCTGATCTGCAGCGAAGAAGCCGAAGAAACGCGAAGCTTTCCCACATTGATTTTCTCAGGTTGATCGAAACCCTAGAACGAAGATACAGGAGAAAAGGAAGAGGAAGAAGAAGTTTTTGTCTCTCGAGCATTTTGGTTCGCGATGGGGTTGTGGGAAGCTTTTCTCAACTGGCTTCGAAGGTATGTTGGAACTGGCGATTGAAATTTTAGAGGAAATGGAAAGAAATTTGTCGAATTCTTTTTTATTGGTTGTTTATCTGATATCCGTTATGCTATATGAATATTATGCAATTGATAATATTCTTATCATTTAGATTAGTGAGCGAGAGGATTATGGAGGTGGAACCTGTTTTTGGTCTTCGTTTAGCTAATGGAAATTGATAATTTCCTCCCCTGGTTTCTAACGTCTCTGTTGTATGGAATTTAAGAATATTAATGGGCGAGAGGGCAACTTATTTTGGTTAAATTGGATAATAGATGATTTATCTCCTACTGTGTTCCGAAACTGATGGTTCATTAATTATACAAATGATGGCCATTTACTGCATCGATTCGTTACTTATTTCGTTTTTTTTTTTGGAACTTATGAAGTTTAGTGTTCTAATAATGCCTTGTGCTGTATTGTTCGGATTTGTTTTGTCTCGCTAAGATGTGTTTTGATTATCATTTTCCTTGTTACACTTCTGCAAGAACGTGGCCAACGTGGGAGGTGACGATTAGGTTTTCAATTTTGAATGAGTTCTGATTATAACCTAAAAAATGTAGTTATTTTGGTGGCTGCAATTCAGAACAATGAATGAACTGGTCAAATTGCGTTTGCAATGATGATATTTTCATTTTGTTAATTGTTTTGTTGATTAGAAGGTAATTTAGATTATTAGTTCTTAATTTTTGTTGATTATGATACGAAAATTTAGATTAGAATTAGATTTGGTTAAATTAGATGAGATGTTTGCTTTGGTTCTTCATGTGATGCCCATCTCTGTGGGGTAAGATACATTTGATCATATTCCTATTGCAGTCTCTTTTTCAAGCAAGAGATGGAATTATCTCTGATTGGGCTTCAGAATGCTGGAAAAACATCGCTTGTAAATGTTATTGCAGTAAGTAATTGTCCCTAACCAACCATGTGTTAAATATTCTTATATCGGCTACTGCTGATGGCTTATCTTTTCTCTTCCTGATTTTAATTTGCAGACGGGTGGATACAGTGAAGACATGATCCCAACGGTGTGTAATATTTTTGAAAGGAATTATACCATTCTCTTGATATTTGATTGTTTCTGTTGCCTTATTTTGTACCATAATAGCTTATTTTTGCATTTCTCTTCAAAGTATCCTTTCATCTGCAGGTAGGATTTAATATGAAGAAGGTGACAAAAGGCAATGTAACAATAAAGCTTTGGGATCTTGGAGGCCAACCAAGGTTCCGTAGTATGTGGGAAAGATATTGCCGTGCAGTCTCTGCAATTGTGTACGTTACCTATATTTGTTGTATACTTTATTGTTTCTGCAGTCTTGGATCTGTGATTCTTGTTTGTTTACTGGGAAGATTTCTTTACTTTGCTGGATTTCTGCTTAAACTTTCTTGCCTAACTCTTTAACTTGTTATGGTCTCTGCATTAATAACAAGGTCCATATAGAAATCGTAAGTTGCGAACGAACAATTCGGATGTATGATCTAGCATGGTGTTTGAAAATTTCGATATCCAGTGCTGAAAAAAGTTGGTTGAAGAGTACTCCTGACTTCTTGTCTTGCAGTTATGTTGTGGATGCTGCTGATTATGAGAACTTGTCTGTCTCAAAAAGTGAACTGCATGACTTGTTGAGTAAGCCTTCACTGAATGGAATCCCCTTGCTGGTATTGGGTAACAAGATTGACAAACAAGGAGCTCTGTCCAAGCAGGATCTCACAGAACGAATGTAAGTTGAATCTAAGAAACCTTGAACTAATAACAATGAGTTCGTTTGTTCTGCAATGATGTTGCTTGATCCCCACCTCAATATCAATCTCCATTGTTAAGTCAAATGAATGAACACGTATAAAGTAAAATGTCTATAAGTGCTTGTTTACAAGTAGTTTGTAGGCAGTTCCTGTGGTTTTCTAAAGACGATTCTTCACCTTGCAGGGGACTGAAGTCTATAACTGATAGAGAAGTCTGTTGCTTTATGATATCGTGCAAGAACTCCACCAATATTGACACTGTTATTGACTGGCTCATAAAGCATTCAAAGTCGAAAAACTAAGCTGCGGTGTCTGCAATATCAGGTTCCAACGTCTAATTGTAAGAGGCATATTTCTAGTTGTGCAAATATGTCAGTTGCCCATCTGAGCTTTGCTGATATCCAACTTCCATGTCCTGTTTTGTGTTTATACCTTGGCAGCACGTACCTATGTACATTGGTTTAGATTTGTATTTGAGGGTTGTGATTATTCTCTTGTTGTTGGGAGGGGAAAAGGGGGGGACTCAGAAACAGAGGTTGGTTTTGATTGTTGCTATAACTTCGATTTCACGATGTGATTTAAACATTTTTCCCATTGTATGATTCTATCTATCACTTGAACCAGTTTTTGAAAATCTCTGGCTAAAAATTGGACCAAAATAACTCACTTAGGAATCCCTACCCGGAATAGATAGGATGTAGATATATATATATATATGTATTCATGTTGGCTGTTCGAATATATTTGGTGATTTAGGTCCTAAGAAACGGTGTTGTTTAGCTTTGAAATGTAGGAAAAGTGATGTTCGAAGACAAATATTACAAATCACGTCTCAGTTTCCTATGTGGGATTGGTTGATGTAGACTTAGTACATGGCAGCCCACTAGCAAGGGAATAGCTCGGCAAGGTAACCACTTTTAAAGATGTTTGACTTGCTGTTTTAACAAGTTTTGGTTTACAAAGCATGTATATTAGTGTACTGGACACTCCAAGGTTAATGGATCATAGAACTTCAATTAGTGGAAATTGTTATGAAAAAAAATCTTGTAGGAAGGTAAAGACTTAATCGATTAATCAATTCTATTCATGTTTCATGTTTAAGCTTAGAATGGAACGTATGAAATGATATTAAGAACATTATCATCATAGTTTTAACGGCCTTAATATTTGTTTTTCTTCTTTTATCTTTGTGCCTTTAAAGTTATTAGCTTCTTACC CATCCATCATCCATCTCTCTTCCCTTTTTCGCTCTCCCTATCTCTCTCTCTCTCTCTCTGAAGAGCTTGAAAAAAGGCGACGGCCAAATTGGCGTTCTGATCTGCAGCGAAGAAGCCGAAGAAACGCGAAGCTTTCCCACATTGATTTTCTCAGGTTGATCGAAACCCTAGAACGAAGATACAGGAGAAAAGGAAGAGGAAGAAGAAGTTTTTGTCTCTCGAGCATTTTGGTTCGCGATGGGGTTGTGGGAAGCTTTTCTCAACTGGCTTCGAAGTCTCTTTTTCAAGCAAGAGATGGAATTATCTCTGATTGGGCTTCAGAATGCTGGAAAAACATCGCTTGTAAATGTTATTGCAACGGGTGGATACAGTGAAGACATGATCCCAACGGTAGGATTTAATATGAAGAAGGTGACAAAAGGCAATGTAACAATAAAGCTTTGGGATCTTGGAGGCCAACCAAGGTTCCGTAGTATGTGGGAAAGATATTGCCGTGCAGTCTCTGCAATTGTTTATGTTGTGGATGCTGCTGATTATGAGAACTTGTCTGTCTCAAAAAGTGAACTGCATGACTTGTTGAGTAAGCCTTCACTGAATGGAATCCCCTTGCTGGTATTGGGTAACAAGATTGACAAACAAGGAGCTCTGTCCAAGCAGGATCTCACAGAACGAATGGGACTGAAGTCTATAACTGATAGAGAAGTCTGTTGCTTTATGATATCGTGCAAGAACTCCACCAATATTGACACTGTTATTGACTGGCTCATAAAGCATTCAAAGTCGAAAAACTAAGCTGCGGTGTCTGCAATATCAGGTTCCAACGTCTAATTGTAAGAGGCATATTTCTAGTTGTGCAAATATGTCAGTTGCCCATCTGAGCTTTGCTGATATCCAACTTCCATGTCCTGTTTTGTGTTTATACCTTGGCAGCACGTACCTATGTACATTGGTTTAGATTTGTATTTGAGGGTTGTGATTATTCTCTTGTTGTTGGGAGGGGAAAAGGGGGGGACTCAGAAACAGAGGTTGGTTTTGATTGTTGCTATAACTTCGATTTCACGATGTGATTTAAACATTTTTCCCATTGTATGATTCTATCTATCACTTGAACCAGTTTTTGAAAATCTCTGGCTAAAAATTGGACCAAAATAACTCACTTAGGAATCCCTACCCGGAATAGATAGGATGTAGATATATATATATATATGTATTCATGTTGGCTGTTCGAATATATTTGGTGATTTAGGTCCTAAGAAACGGTGTTGTTTAGCTTTGAAATGTAGGAAAAGTGATGTTCGAAGACAAATATTACAAATCACGTCTCAGTTTCCTATGTGGGATTGGTTGATGTAGACTTAGTACATGGCAGCCCACTAGCAAGGGAATAGCTCGGCAAGGTAACCACTTTTAAAGATGTTTGACTTGCTGTTTTAACAAGTTTTGGTTTACAAAGCATGTATATTAGTGTACTGGACACTCCAAGGTTAATGGATCATAGAACTTCAATTAGTGGAAATTGTTATGAAAAAAAATCTTGTAGGAAGGTAAAGACTTAATCGATTAATCAATTCTATTCATGTTTCATGTTTAAGCTTAGAATGGAACGTATGAAATGATATTAAGAACATTATCATCATAGTTTTAACGGCCTTAATATTTGTTTTTCTTCTTTTATCTTTGTGCCTTTAAAGTTATTAGCTTCTTACC ATGGGGTTGTGGGAAGCTTTTCTCAACTGGCTTCGAAGTCTCTTTTTCAAGCAAGAGATGGAATTATCTCTGATTGGGCTTCAGAATGCTGGAAAAACATCGCTTGTAAATGTTATTGCAACGGGTGGATACAGTGAAGACATGATCCCAACGGTAGGATTTAATATGAAGAAGGTGACAAAAGGCAATGTAACAATAAAGCTTTGGGATCTTGGAGGCCAACCAAGGTTCCGTAGTATGTGGGAAAGATATTGCCGTGCAGTCTCTGCAATTGTTTATGTTGTGGATGCTGCTGATTATGAGAACTTGTCTGTCTCAAAAAGTGAACTGCATGACTTGTTGAGTAAGCCTTCACTGAATGGAATCCCCTTGCTGGTATTGGGTAACAAGATTGACAAACAAGGAGCTCTGTCCAAGCAGGATCTCACAGAACGAATGGGACTGAAGTCTATAACTGATAGAGAAGTCTGTTGCTTTATGATATCGTGCAAGAACTCCACCAATATTGACACTGTTATTGACTGGCTCATAAAGCATTCAAAGTCGAAAAACTAA MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMKKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYENLSVSKSELHDLLSKPSLNGIPLLVLGNKIDKQGALSKQDLTERMGLKSITDREVCCFMISCKNSTNIDTVIDWLIKHSKSKN
BLAST of Cp4.1LG04g07600.1 vs. Swiss-Prot
Match: ARL8A_CHICK (ADP-ribosylation factor-like protein 8A OS=Gallus gallus GN=ARL8A PE=2 SV=1) HSP 1 Score: 265.4 bits (677), Expect = 4.7e-70 Identity = 121/183 (66.12%), Postives = 152/183 (83.06%), Query Frame = 1
BLAST of Cp4.1LG04g07600.1 vs. Swiss-Prot
Match: ARL8A_HUMAN (ADP-ribosylation factor-like protein 8A OS=Homo sapiens GN=ARL8A PE=1 SV=1) HSP 1 Score: 263.8 bits (673), Expect = 1.4e-69 Identity = 120/183 (65.57%), Postives = 152/183 (83.06%), Query Frame = 1
BLAST of Cp4.1LG04g07600.1 vs. Swiss-Prot
Match: ARL8A_MOUSE (ADP-ribosylation factor-like protein 8A OS=Mus musculus GN=Arl8a PE=1 SV=1) HSP 1 Score: 263.8 bits (673), Expect = 1.4e-69 Identity = 120/183 (65.57%), Postives = 152/183 (83.06%), Query Frame = 1
BLAST of Cp4.1LG04g07600.1 vs. Swiss-Prot
Match: ARL8A_XENTR (ADP-ribosylation factor-like protein 8A OS=Xenopus tropicalis GN=arl8a PE=2 SV=1) HSP 1 Score: 260.8 bits (665), Expect = 1.2e-68 Identity = 119/183 (65.03%), Postives = 151/183 (82.51%), Query Frame = 1
BLAST of Cp4.1LG04g07600.1 vs. Swiss-Prot
Match: ARL8B_HUMAN (ADP-ribosylation factor-like protein 8B OS=Homo sapiens GN=ARL8B PE=1 SV=1) HSP 1 Score: 259.6 bits (662), Expect = 2.6e-68 Identity = 119/183 (65.03%), Postives = 149/183 (81.42%), Query Frame = 1
BLAST of Cp4.1LG04g07600.1 vs. TrEMBL
Match: A0A0A0K7Q5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G071350 PE=3 SV=1) HSP 1 Score: 368.2 bits (944), Expect = 5.7e-99 Identity = 180/184 (97.83%), Postives = 183/184 (99.46%), Query Frame = 1
BLAST of Cp4.1LG04g07600.1 vs. TrEMBL
Match: A0A067LJN8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16342 PE=3 SV=1) HSP 1 Score: 365.9 bits (938), Expect = 2.8e-98 Identity = 178/184 (96.74%), Postives = 183/184 (99.46%), Query Frame = 1
BLAST of Cp4.1LG04g07600.1 vs. TrEMBL
Match: B9T2F5_RICCO (ADP-ribosylation factor, putative OS=Ricinus communis GN=RCOM_0834710 PE=3 SV=1) HSP 1 Score: 358.6 bits (919), Expect = 4.5e-96 Identity = 174/184 (94.57%), Postives = 181/184 (98.37%), Query Frame = 1
BLAST of Cp4.1LG04g07600.1 vs. TrEMBL
Match: M5W6X4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012073mg PE=3 SV=1) HSP 1 Score: 356.7 bits (914), Expect = 1.7e-95 Identity = 174/184 (94.57%), Postives = 180/184 (97.83%), Query Frame = 1
BLAST of Cp4.1LG04g07600.1 vs. TrEMBL
Match: A9P8D9_POPTR (ADP-ribosylation factor family protein OS=Populus trichocarpa GN=POPTR_0009s09050g PE=2 SV=1) HSP 1 Score: 356.3 bits (913), Expect = 2.2e-95 Identity = 172/184 (93.48%), Postives = 181/184 (98.37%), Query Frame = 1
BLAST of Cp4.1LG04g07600.1 vs. TAIR10
Match: AT3G49870.1 (AT3G49870.1 ADP-ribosylation factor-like A1C) HSP 1 Score: 342.8 bits (878), Expect = 1.3e-94 Identity = 169/184 (91.85%), Postives = 176/184 (95.65%), Query Frame = 1
BLAST of Cp4.1LG04g07600.1 vs. TAIR10
Match: AT5G67560.1 (AT5G67560.1 ADP-ribosylation factor-like A1D) HSP 1 Score: 341.7 bits (875), Expect = 2.9e-94 Identity = 166/184 (90.22%), Postives = 176/184 (95.65%), Query Frame = 1
BLAST of Cp4.1LG04g07600.1 vs. TAIR10
Match: AT5G37680.1 (AT5G37680.1 ADP-ribosylation factor-like A1A) HSP 1 Score: 313.2 bits (801), Expect = 1.1e-85 Identity = 146/182 (80.22%), Postives = 170/182 (93.41%), Query Frame = 1
BLAST of Cp4.1LG04g07600.1 vs. TAIR10
Match: AT3G49860.1 (AT3G49860.1 ADP-ribosylation factor-like A1B) HSP 1 Score: 275.8 bits (704), Expect = 1.9e-74 Identity = 135/167 (80.84%), Postives = 146/167 (87.43%), Query Frame = 1
BLAST of Cp4.1LG04g07600.1 vs. TAIR10
Match: AT2G24765.1 (AT2G24765.1 ADP-ribosylation factor 3) HSP 1 Score: 114.0 bits (284), Expect = 9.8e-26 Identity = 60/176 (34.09%), Postives = 91/176 (51.70%), Query Frame = 1
BLAST of Cp4.1LG04g07600.1 vs. NCBI nr
Match: gi|449438319|ref|XP_004136936.1| (PREDICTED: ADP-ribosylation factor-like protein 8A [Cucumis sativus]) HSP 1 Score: 368.2 bits (944), Expect = 8.2e-99 Identity = 180/184 (97.83%), Postives = 183/184 (99.46%), Query Frame = 1
BLAST of Cp4.1LG04g07600.1 vs. NCBI nr
Match: gi|802550717|ref|XP_012093133.1| (PREDICTED: ADP-ribosylation factor-like protein 8A [Jatropha curcas]) HSP 1 Score: 365.9 bits (938), Expect = 4.1e-98 Identity = 178/184 (96.74%), Postives = 183/184 (99.46%), Query Frame = 1
BLAST of Cp4.1LG04g07600.1 vs. NCBI nr
Match: gi|1009149923|ref|XP_015892740.1| (PREDICTED: ADP-ribosylation factor-like protein 8A isoform X1 [Ziziphus jujuba]) HSP 1 Score: 360.5 bits (924), Expect = 1.7e-96 Identity = 176/184 (95.65%), Postives = 181/184 (98.37%), Query Frame = 1
BLAST of Cp4.1LG04g07600.1 vs. NCBI nr
Match: gi|255583323|ref|XP_002532424.1| (PREDICTED: ADP-ribosylation factor-like protein 8A [Ricinus communis]) HSP 1 Score: 358.6 bits (919), Expect = 6.5e-96 Identity = 174/184 (94.57%), Postives = 181/184 (98.37%), Query Frame = 1
BLAST of Cp4.1LG04g07600.1 vs. NCBI nr
Match: gi|595798185|ref|XP_007201361.1| (hypothetical protein PRUPE_ppa012073mg [Prunus persica]) HSP 1 Score: 356.7 bits (914), Expect = 2.5e-95 Identity = 174/184 (94.57%), Postives = 180/184 (97.83%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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