Cp4.1LG04g03900.1 (mRNA) Cucurbita pepo (Zucchini)

NameCp4.1LG04g03900.1
TypemRNA
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUnknown protein
LocationCp4.1LG04 : 6918406 .. 6919026 (-)
Sequence length535
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGGAAACCAATCACTCAAGTTCATCTCAAACCCACCATAGTTGTTGTTGAGTATAGTGATAAGAGATATCAACTAAAATGAGTGGTCGGAAGGGTTCAGTTCTTTTGGCTTTCTTGCTCTTCTTTTTCCTCTTCTCCTCCGAGCTGGCTGCTGCCCGGAAGCTGATGATGGCCGGAAACAACGGTGAGGTTCTTACATATTGTGCAGCCTACCGTTTTAGTTTTGCTCAAGTATATATAGTGAAAGCTTAAATTTGTTTGTGGATGCAGCAGCGGCCATACATGAAGACCCCACCGTTTTCAGCAGCCCCGCCACACAAAACCCCGACGAGCAAAATTGCTATTGTTATAGTGATTGCAACTCTTGCCTAACCTCGGTCTGCGATCCTTATACACAAGACTGCCCTCCGCGGAACTGAAGTGGACCCTAAGATCAAACACCATGGAAACTAAATAAACTAACCCACACCTACCTGGGTTTTTAATTACTATCTATCTTACCTTTGTTGTCTGTATTGAATCCTATTTATATGGTTATAAGTTTGGGAGATTCATGTTTTATGCCGATGATGCATGGGTATGATTCGTAACTCGATCAATAGTACATGTATGTCATGCTCTG

mRNA sequence

AGGAAACCAATCACTCAAGTTCATCTCAAACCCACCATAGTTGTTGTTGAGTATAGTGATAAGAGATATCAACTAAAATGAGTGGTCGGAAGGGTTCAGTTCTTTTGGCTTTCTTGCTCTTCTTTTTCCTCTTCTCCTCCGAGCTGGCTGCTGCCCGGAAGCTGATGATGGCCGGAAACAACGCAGCGGCCATACATGAAGACCCCACCGTTTTCAGCAGCCCCGCCACACAAAACCCCGACGAGCAAAATTGCTATTGTTATAGTGATTGCAACTCTTGCCTAACCTCGGTCTGCGATCCTTATACACAAGACTGCCCTCCGCGGAACTGAAGTGGACCCTAAGATCAAACACCATGGAAACTAAATAAACTAACCCACACCTACCTGGGTTTTTAATTACTATCTATCTTACCTTTGTTGTCTGTATTGAATCCTATTTATATGGTTATAAGTTTGGGAGATTCATGTTTTATGCCGATGATGCATGGGTATGATTCGTAACTCGATCAATAGTACATGTATGTCATGCTCTG

Coding sequence (CDS)

ATGAGTGGTCGGAAGGGTTCAGTTCTTTTGGCTTTCTTGCTCTTCTTTTTCCTCTTCTCCTCCGAGCTGGCTGCTGCCCGGAAGCTGATGATGGCCGGAAACAACGCAGCGGCCATACATGAAGACCCCACCGTTTTCAGCAGCCCCGCCACACAAAACCCCGACGAGCAAAATTGCTATTGTTATAGTGATTGCAACTCTTGCCTAACCTCGGTCTGCGATCCTTATACACAAGACTGCCCTCCGCGGAACTGA

Protein sequence

MSGRKGSVLLAFLLFFFLFSSELAAARKLMMAGNNAAAIHEDPTVFSSPATQNPDEQNCYCYSDCNSCLTSVCDPYTQDCPPRN
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cp4.1LG04g03900Cp4.1LG04g03900gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cp4.1LG04g03900.1:five_prime_utr:001Cp4.1LG04g03900.1:five_prime_utr:001five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cp4.1LG04g03900.1:cds:001Cp4.1LG04g03900.1:cds:001CDS
Cp4.1LG04g03900.1:cds:002Cp4.1LG04g03900.1:cds:002CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cp4.1LG04g03900.1:three_prime_utr:001Cp4.1LG04g03900.1:three_prime_utr:001three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cp4.1LG04g03900.1Cp4.1LG04g03900.1-proteinpolypeptide