Cp4.1LG04g02970.1 (mRNA) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG04g02970.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Protein of unknown function (DUF640)
Location	Cp4.1LG04 : 7507586 .. 7509788 (+)
Sequence length	852

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAACCAAAGATTTCTCTGAAGGATCTTCATCAACCTCTTCCCCTCAGCCTGGTGGATCAATCCCAAGCCGATACGAGTCCCAAAAACGACGAGATTGGAACACATTTTGCCAATACTTGAAGAATCAAAGGCCCCCAGTTCCTCTTTCCCATTGTAGTTGTAACCATGTTTTGGAGTTTTTAAGGTACCTCGATCAGTTTGGCAAGACAAAAGTTCATGTTCAAGGTTGCATGTTCTACGGCCAGCCCGAGCCACCTGCCCCTTGTACTTGCCCTTTAAGACAAGCTTGGGGCAGTTTGGATGCCCTTATTGGGCGCTTGAGAGCTGCTTATGAAGAAAGTGGTGGCTCCCCGGAGACCAACCCCTTTGCTAGCGGTGCAATTAGGGTTTATCTTAGGGATGTCAGAGAGTGTCAAGCTAAAGCTAGAGGAATTCCTTACAAGAAGAAGAAGAAGAAGACTACTACCACTAATCAATCCAAAGGAGCTGAAGATTCAACCTCTATGATGCACTTTGTCCCTTGATCATTATGGTAACTTATTTCCCCTTTTCATTTCTCGTTCAAATTAAAACGTCTAACGATTAGGGTTTCTGTATACCGTTTTAATCATCTGGGTTATGCTCGACTTACTTAACCGGATCTCCTTTTCCTTAGAATTGCTTCTGAAACAACTACGTGTTATAAACGATTCTCGTATGAATCAGGTCAAATATAGACAACTCTGTCACTTAGAGCTAAACTATTAGTGATAATTCTAGCATCAAAATGTTGACTATGAGTGATGTTTTTTCACAAAGGGTTGAAAGAACATGATTAAGGTAAATTTCATGTCTCATGACAAAGATTATGTCCCAAATTATAATGTGTTTTCATGTTTTATTTTCTTATAATAACTTATAATATAAAGTCATATGATCATATCAAAACCTCTATTTGCATTATACGAGACACCATGGTATTTATTACTTTAATTTCTTAATTAAAGACCCACTTATTGCTTTTTTATTGTTTTTAAAAAACCAATTTTATTTTTTTAATTTAAATTTTATTATATAGTTTTAGCTTCGTAGTATATCTAGATTTGCTTCTTGTCCAATATTAGATTTTGTGGGACACTGAGTTATATTCCATCATCCAAATTTTTGGACTTGAAAATCTTTTTATATTCCCTATTTTCCCTCTCTTTTTTCCCCCAAAACTTAGCTTAAATTAATTTTCTTCATATTTTATACAAATTCGTATAAAAAAATAACTAGGGTTTGCTCCTTGTCGTGAAAATGTTAGCTCTCGACGTTACGTGAAGGTAGAAGATCGAACACTAACCTTTGAGTGAAGATATTATGCCTTACCTAGTCGAGTGATACTCGAGCTGACTCGTGGATCTTACTAAAAAAACACTAGATTATTGTCGTGTCTCAAAATGTAGATGGTGGGTAGGCATATTTATTGCAAATGGGATTTAGCTACATGCATAACCCGAGATTTTAGCTTAAATAGTCAGCACCGTAAAAGTGTCTATAACTCGGTGATAATTAGCGTATACCCTTCAACCAAAAAGGCCGACATTTTTCATTTGCAAATAGAAGTACATAACCTATCTACTGTTGGACGATGAAAGTTCTACATCGGCTAAGAGAATGATCATGGGTTTATAATCCAGGAATACTCTCTTCATTGGTATGAGACGTTTTGGGGAAGCCCAAAGCAAAGCCGTGAGAGATTATACTCAAAGTGGACAAATATCATACCATTGTGGAGAGTCGTGTTCGTCTAACATCTACTACGAGAATTAGAACCTTTTTTTATCTCAAAGACAGAAGTACATGTTGATTACCACCACTGAATTATGCTCGGTATATTTGCAGGAACTAAACGACGACGGGACAAAAAGAAAAAAGTGAAGGGTTTGTTGTTGATTGAGAGAAGAAATGAATAAGTTACATGTTATTGTTCTTGTTGGGAGAAGTTATATATATATATATATATATATATATATATATATATATATATATATATTGTGAAGAGGATTGAATGTGTATCAAATTTCATTAAAGCCATTAGTACTTTATGATATCAGAGAGTTTTCATTTCCTTTTGCCTTTTGAATTTTCAGCTTTTAAAATTACCTTTGGTATCACAAAACTGATCTAAATGTACGTAATTTGCTGAGCTTTGTAATATGTGTGTTGTGCTGTGCTGCA

mRNA sequence

GGAACCAAAGATTTCTCTGAAGGATCTTCATCAACCTCTTCCCCTCAGCCTGGTGGATCAATCCCAAGCCGATACGAGTCCCAAAAACGACGAGATTGGAACACATTTTGCCAATACTTGAAGAATCAAAGGCCCCCAGTTCCTCTTTCCCATTGTAGTTGTAACCATGTTTTGGAGTTTTTAAGGTACCTCGATCAGTTTGGCAAGACAAAAGTTCATGTTCAAGGTTGCATGTTCTACGGCCAGCCCGAGCCACCTGCCCCTTGTACTTGCCCTTTAAGACAAGCTTGGGGCAGTTTGGATGCCCTTATTGGGCGCTTGAGAGCTGCTTATGAAGAAAGTGGTGGCTCCCCGGAGACCAACCCCTTTGCTAGCGGTGCAATTAGGGTTTATCTTAGGGATGTCAGAGAGTGTCAAGCTAAAGCTAGAGGAATTCCTTACAAGAAGAAGAAGAAGAAGACTACTACCACTAATCAATCCAAAGGAGCTGAAGATTCAACCTCTATGATGCACTTTGAACTAAACGACGACGGGACAAAAAGAAAAAAGTGAAGGGTTTGTTGTTGATTGAGAGAAGAAATGAATAAGTTACATGTTATTGTTCTTGTTGGGAGAAGTTATATATATATATATATATATATATATATATATATATATATATATATATTGTGAAGAGGATTGAATGTGTATCAAATTTCATTAAAGCCATTAGTACTTTATGATATCAGAGAGTTTTCATTTCCTTTTGCCTTTTGAATTTTCAGCTTTTAAAATTACCTTTGGTATCACAAAACTGATCTAAATGTACGTAATTTGCTGAGCTTTGTAATATGTGTGTTGTGCTGTGCTGCA

Coding sequence (CDS)

GGAACCAAAGATTTCTCTGAAGGATCTTCATCAACCTCTTCCCCTCAGCCTGGTGGATCAATCCCAAGCCGATACGAGTCCCAAAAACGACGAGATTGGAACACATTTTGCCAATACTTGAAGAATCAAAGGCCCCCAGTTCCTCTTTCCCATTGTAGTTGTAACCATGTTTTGGAGTTTTTAAGGTACCTCGATCAGTTTGGCAAGACAAAAGTTCATGTTCAAGGTTGCATGTTCTACGGCCAGCCCGAGCCACCTGCCCCTTGTACTTGCCCTTTAAGACAAGCTTGGGGCAGTTTGGATGCCCTTATTGGGCGCTTGAGAGCTGCTTATGAAGAAAGTGGTGGCTCCCCGGAGACCAACCCCTTTGCTAGCGGTGCAATTAGGGTTTATCTTAGGGATGTCAGAGAGTGTCAAGCTAAAGCTAGAGGAATTCCTTACAAGAAGAAGAAGAAGAAGACTACTACCACTAATCAATCCAAAGGAGCTGAAGATTCAACCTCTATGATGCACTTTGAACTAAACGACGACGGGACAAAAAGAAAAAAGTGA

Protein sequence

GTKDFSEGSSSTSSPQPGGSIPSRYESQKRRDWNTFCQYLKNQRPPVPLSHCSCNHVLEFLRYLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEESGGSPETNPFASGAIRVYLRDVRECQAKARGIPYKKKKKKTTTTNQSKGAEDSTSMMHFELNDDGTKRKK

Homology

[Close]

BLAST of Cp4.1LG04g02970.1 vs. Swiss-Prot
Match: LSH10_ARATH (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 OS=Arabidopsis thaliana GN=LSH10 PE=1 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 4.8e-75
Identity = 131/147 (89.12%), Postives = 136/147 (92.52%), Query Frame = 1


Query: 22  PSRYESQKRRDWNTFCQYLKNQRPPVPLSHCSCNHVLEFLRYLDQFGKTKVHVQGCMFYG 81
           PSRYESQKRRDWNTF QYLKNQRPPVP+SHCSCNHVL+FLRYLDQFGKTKVHV GCMFYG
Sbjct: 23  PSRYESQKRRDWNTFGQYLKNQRPPVPMSHCSCNHVLDFLRYLDQFGKTKVHVPGCMFYG 82

Query: 82  QPEPPAPCTCPLRQAWGSLDALIGRLRAAYEESGGSPETNPFASGAIRVYLRDVRECQAK 141
           QPEPPAPCTCPLRQAWGSLDALIGRLRAAYEE+GG PETNPFASGAIRVYLR+VRECQAK
Sbjct: 83  QPEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGPPETNPFASGAIRVYLREVRECQAK 142

Query: 142 ARGIPYKKKKKKTTTTNQSKGAEDSTS 169
           ARGIPYKKKKKK  T     G EDS+S
Sbjct: 143 ARGIPYKKKKKKKPTPEMGGGREDSSS 169

[Close]

BLAST of Cp4.1LG04g02970.1 vs. Swiss-Prot
Match: G1L7_ORYSI (Protein G1-like7 OS=Oryza sativa subsp. indica GN=OsI_10694 PE=3 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 4.7e-62
Identity = 112/156 (71.79%), Postives = 129/156 (82.69%), Query Frame = 1


Query: 13  SSPQPGGSIPSRYESQKRRDWNTFCQYLKNQRPPVPLSHCSCNHVLEFLRYLDQFGKTKV 72
           ++PQP   + SRYESQKRRDWNTF QYL+N RPP+ L+ CS  HV+EFLRYLDQFGKTKV
Sbjct: 21  AAPQPPAQL-SRYESQKRRDWNTFLQYLRNHRPPLTLARCSGAHVIEFLRYLDQFGKTKV 80

Query: 73  HVQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEESGGSPETNPFASGAIRVYL 132
           H  GC FYGQP PP PC CPLRQAWGSLDALIGRLRAAYEESGG+PE+NPFA+ A+R+YL
Sbjct: 81  HASGCAFYGQPSPPGPCPCPLRQAWGSLDALIGRLRAAYEESGGTPESNPFAARAVRIYL 140

Query: 133 RDVRECQAKARGIPYKKKKKKTTTTNQSKGAEDSTS 169
           R+VR+ QAKARGIPY+KKK+K +   Q  G E S S
Sbjct: 141 REVRDSQAKARGIPYEKKKRKRSQAAQPAGVEPSGS 175

[Close]

BLAST of Cp4.1LG04g02970.1 vs. Swiss-Prot
Match: G1L7_ORYSJ (Protein G1-like7 OS=Oryza sativa subsp. japonica GN=G1L7 PE=1 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 4.7e-62
Identity = 112/156 (71.79%), Postives = 129/156 (82.69%), Query Frame = 1


Query: 13  SSPQPGGSIPSRYESQKRRDWNTFCQYLKNQRPPVPLSHCSCNHVLEFLRYLDQFGKTKV 72
           ++PQP   + SRYESQKRRDWNTF QYL+N RPP+ L+ CS  HV+EFLRYLDQFGKTKV
Sbjct: 21  AAPQPPAQL-SRYESQKRRDWNTFLQYLRNHRPPLTLARCSGAHVIEFLRYLDQFGKTKV 80

Query: 73  HVQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEESGGSPETNPFASGAIRVYL 132
           H  GC FYGQP PP PC CPLRQAWGSLDALIGRLRAAYEESGG+PE+NPFA+ A+R+YL
Sbjct: 81  HASGCAFYGQPSPPGPCPCPLRQAWGSLDALIGRLRAAYEESGGTPESNPFAARAVRIYL 140

Query: 133 RDVRECQAKARGIPYKKKKKKTTTTNQSKGAEDSTS 169
           R+VR+ QAKARGIPY+KKK+K +   Q  G E S S
Sbjct: 141 REVRDSQAKARGIPYEKKKRKRSQAAQPAGVEPSGS 175

[Close]

BLAST of Cp4.1LG04g02970.1 vs. Swiss-Prot
Match: G1L8_ORYSJ (Protein G1-like8 OS=Oryza sativa subsp. japonica GN=G1L8 PE=1 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 4.4e-60
Identity = 105/137 (76.64%), Postives = 119/137 (86.86%), Query Frame = 1


Query: 23  SRYESQKRRDWNTFCQYLKNQRPPVPLSHCSCNHVLEFLRYLDQFGKTKVHVQGCMFYGQ 82
           SRYESQKRRDWNTF QYLKN RPP+ L+ CS  HV+EFL+YLDQFGKTKVH  GC +YGQ
Sbjct: 29  SRYESQKRRDWNTFLQYLKNHRPPLTLARCSGAHVIEFLKYLDQFGKTKVHASGCAYYGQ 88

Query: 83  PEPPAPCTCPLRQAWGSLDALIGRLRAAYEESGGSPETNPFASGAIRVYLRDVRECQAKA 142
           P PPAPC CPLRQAWGSLDALIGRLRAAYEESG +PE+NPFA+ A+R+YLR+VR+ QAKA
Sbjct: 89  PSPPAPCPCPLRQAWGSLDALIGRLRAAYEESGHAPESNPFAARAVRIYLREVRDAQAKA 148

Query: 143 RGIPYKKKKKKTTTTNQ 160
           RGIPY+KKK+K T   Q
Sbjct: 149 RGIPYEKKKRKRTQQQQ 165

[Close]

BLAST of Cp4.1LG04g02970.1 vs. Swiss-Prot
Match: G1L8_ORYSI (Protein G1-like8 OS=Oryza sativa subsp. indica GN=OsI_20303 PE=3 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 3.7e-59
Identity = 108/161 (67.08%), Postives = 126/161 (78.26%), Query Frame = 1


Query: 8   GSSSTSSPQPGGSIP---------SRYESQKRRDWNTFCQYLKNQRPPVPLSHCSCNHVL 67
           G+ + +  QP    P         SRYESQKRRDWNTF QYL+N RPP+ L+ CS  HV+
Sbjct: 7   GADAQAQAQPVAQAPPAMQPMQQLSRYESQKRRDWNTFLQYLRNHRPPLTLARCSGAHVI 66

Query: 68  EFLRYLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEESGGSP 127
           EFL+YLDQFGKTKVH  GC +YGQP PPAPC CPLRQAWGSLDALIGRLRAAYEESG +P
Sbjct: 67  EFLKYLDQFGKTKVHASGCAYYGQPSPPAPCPCPLRQAWGSLDALIGRLRAAYEESGHAP 126

Query: 128 ETNPFASGAIRVYLRDVRECQAKARGIPYKKKKKKTTTTNQ 160
           E+NPFA+ A+R+YLR+VR+ QAKARGIPY+KKK+K T   Q
Sbjct: 127 ESNPFAARAVRIYLREVRDAQAKARGIPYEKKKRKRTQQQQ 167

[Close]

BLAST of Cp4.1LG04g02970.1 vs. TrEMBL
Match: A0A0A0K2D1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G048120 PE=4 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 2.9e-79
Identity = 150/180 (83.33%), Postives = 159/180 (88.33%), Query Frame = 1


Query: 2   TKDFSEGSSSTSS--PQPGGSIPSRYESQKRRDWNTFCQYLKNQRPPVPLSHCSCNHVLE 61
           +KDFSEGSSS+S      G + PSRYESQKRRDWNTFCQYLKNQRPPVPLSHC+CN VLE
Sbjct: 9   SKDFSEGSSSSSGGGSTHGSTTPSRYESQKRRDWNTFCQYLKNQRPPVPLSHCNCNQVLE 68

Query: 62  FLRYLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEESGGSPE 121
           FLRYLDQFGKTKVH+QGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEE+GGS E
Sbjct: 69  FLRYLDQFGKTKVHIQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGSQE 128

Query: 122 TNPFASGAIRVYLRDVRECQAKARGIPYKKKKKKTTTTNQSKGA-------EDSTSMMHF 173
           TNPFASGAIRVYLRDVRECQAKARGIPYKKKKKK TT +Q+KG+         STSMMHF
Sbjct: 129 TNPFASGAIRVYLRDVRECQAKARGIPYKKKKKK-TTISQTKGSGGHDDQDSSSTSMMHF 187

[Close]

BLAST of Cp4.1LG04g02970.1 vs. TrEMBL
Match: A0A0B2R823_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_007674 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 1.5e-75
Identity = 141/172 (81.98%), Postives = 154/172 (89.53%), Query Frame = 1


Query: 2   TKDFSEGSSS-TSSPQPGGSIPSRYESQKRRDWNTFCQYLKNQRPPVPLSHCSCNHVLEF 61
           +KDF EGSSS T + Q      SRYESQKRRDWNTF QYLKNQRPPVPLS C+CNHVL+F
Sbjct: 6   SKDFGEGSSSPTDNYQQSPGTLSRYESQKRRDWNTFGQYLKNQRPPVPLSQCNCNHVLDF 65

Query: 62  LRYLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEESGGSPET 121
           LRYLDQFGKTKVH+QGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEE+GGSPET
Sbjct: 66  LRYLDQFGKTKVHLQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGSPET 125

Query: 122 NPFASGAIRVYLRDVRECQAKARGIPYKKKKKKTTTTNQSKGAEDSTSMMHF 173
           NPFASG+IRVYL++VRECQAKARGIPYKKKKK    +NQSKG ++S+S MHF
Sbjct: 126 NPFASGSIRVYLKEVRECQAKARGIPYKKKKK---ASNQSKGNDESSSTMHF 174

[Close]

BLAST of Cp4.1LG04g02970.1 vs. TrEMBL
Match: I1LUM7_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_12G210800 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 1.5e-75
Identity = 141/172 (81.98%), Postives = 154/172 (89.53%), Query Frame = 1


Query: 2   TKDFSEGSSS-TSSPQPGGSIPSRYESQKRRDWNTFCQYLKNQRPPVPLSHCSCNHVLEF 61
           +KDF EGSSS T + Q      SRYESQKRRDWNTF QYLKNQRPPVPLS C+CNHVL+F
Sbjct: 6   SKDFGEGSSSPTDNYQQSPGTLSRYESQKRRDWNTFGQYLKNQRPPVPLSQCNCNHVLDF 65

Query: 62  LRYLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEESGGSPET 121
           LRYLDQFGKTKVH+QGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEE+GGSPET
Sbjct: 66  LRYLDQFGKTKVHLQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGSPET 125

Query: 122 NPFASGAIRVYLRDVRECQAKARGIPYKKKKKKTTTTNQSKGAEDSTSMMHF 173
           NPFASG+IRVYL++VRECQAKARGIPYKKKKK    +NQSKG ++S+S MHF
Sbjct: 126 NPFASGSIRVYLKEVRECQAKARGIPYKKKKK---ASNQSKGNDESSSTMHF 174

[Close]

BLAST of Cp4.1LG04g02970.1 vs. TrEMBL
Match: A0A067KTB1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11031 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 2.0e-75
Identity = 140/170 (82.35%), Postives = 152/170 (89.41%), Query Frame = 1


Query: 3   KDFSEGSSSTSSPQPGGSIPSRYESQKRRDWNTFCQYLKNQRPPVPLSHCSCNHVLEFLR 62
           KD +EGS+  ++     + PSRYESQKRRDWNTF QYLKNQRPPVPLS C+CNHVL+FLR
Sbjct: 7   KDLAEGSNEQAA-----ATPSRYESQKRRDWNTFGQYLKNQRPPVPLSQCNCNHVLDFLR 66

Query: 63  YLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEESGGSPETNP 122
           YLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEE+GGSPETNP
Sbjct: 67  YLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGSPETNP 126

Query: 123 FASGAIRVYLRDVRECQAKARGIPYKKKKKKTTTTNQSKGAEDSTSMMHF 173
           FASGAIRVYLR+VR+CQAKARGIPYKKKKKK T    SKG ++STS MHF
Sbjct: 127 FASGAIRVYLREVRDCQAKARGIPYKKKKKKPT---PSKGIDESTSAMHF 168

[Close]

BLAST of Cp4.1LG04g02970.1 vs. TrEMBL
Match: V4UCN2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016699mg PE=4 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 1.3e-74
Identity = 138/170 (81.18%), Postives = 150/170 (88.24%), Query Frame = 1


Query: 3   KDFSEGSSSTSSPQPGGSIPSRYESQKRRDWNTFCQYLKNQRPPVPLSHCSCNHVLEFLR 62
           K+ +EGSS         + PSRYESQKRRDWNTF QYLKNQRPPVPLS CSCNHVL+FLR
Sbjct: 42  KEIAEGSSDHHHQLQQPATPSRYESQKRRDWNTFGQYLKNQRPPVPLSQCSCNHVLDFLR 101

Query: 63  YLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEESGGSPETNP 122
           YLDQFGKTKVH+QGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEE+GGSPETNP
Sbjct: 102 YLDQFGKTKVHLQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGSPETNP 161

Query: 123 FASGAIRVYLRDVRECQAKARGIPYKKKKKKTTTTNQSKGAEDSTSMMHF 173
           FASGAIRVYLR+VRECQAKARGIPYKKKKKK    +Q K +++S+S MHF
Sbjct: 162 FASGAIRVYLREVRECQAKARGIPYKKKKKK---PSQGKASDESSSAMHF 208

[Close]

BLAST of Cp4.1LG04g02970.1 vs. TAIR10
Match: AT2G42610.1 (AT2G42610.1 Protein of unknown function (DUF640))

HSP 1 Score: 282.0 bits (720), Expect = 2.7e-76
Identity = 131/147 (89.12%), Postives = 136/147 (92.52%), Query Frame = 1


Query: 22  PSRYESQKRRDWNTFCQYLKNQRPPVPLSHCSCNHVLEFLRYLDQFGKTKVHVQGCMFYG 81
           PSRYESQKRRDWNTF QYLKNQRPPVP+SHCSCNHVL+FLRYLDQFGKTKVHV GCMFYG
Sbjct: 23  PSRYESQKRRDWNTFGQYLKNQRPPVPMSHCSCNHVLDFLRYLDQFGKTKVHVPGCMFYG 82

Query: 82  QPEPPAPCTCPLRQAWGSLDALIGRLRAAYEESGGSPETNPFASGAIRVYLRDVRECQAK 141
           QPEPPAPCTCPLRQAWGSLDALIGRLRAAYEE+GG PETNPFASGAIRVYLR+VRECQAK
Sbjct: 83  QPEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGPPETNPFASGAIRVYLREVRECQAK 142

Query: 142 ARGIPYKKKKKKTTTTNQSKGAEDSTS 169
           ARGIPYKKKKKK  T     G EDS+S
Sbjct: 143 ARGIPYKKKKKKKPTPEMGGGREDSSS 169

[Close]

BLAST of Cp4.1LG04g02970.1 vs. TAIR10
Match: AT1G78815.1 (AT1G78815.1 Protein of unknown function (DUF640))

HSP 1 Score: 227.6 bits (579), Expect = 6.1e-60
Identity = 113/177 (63.84%), Postives = 133/177 (75.14%), Query Frame = 1


Query: 3   KDFSEGSSSTSS-PQPGGSIP---------SRYESQKRRDWNTFCQYLKNQRPPVPLSHC 62
           K  +EGSS   S PQP    P         SRYESQKRRDWNTFCQYL+NQ+PPV +S C
Sbjct: 9   KGIAEGSSQPQSQPQPQPHQPQSPPNPPALSRYESQKRRDWNTFCQYLRNQQPPVHISQC 68

Query: 63  SCNHVLEFLRYLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYE 122
             NH+L+FL+YLDQFGKTKVH+ GC+F+GQ EP   C CPL+QAWGSLDALIGRLRAA+E
Sbjct: 69  GSNHILDFLQYLDQFGKTKVHIHGCVFFGQVEPAGQCNCPLKQAWGSLDALIGRLRAAFE 128

Query: 123 ESGGSPETNPFASGAIRVYLRDVRECQAKARGIPYKK-KKKKTTTTNQSKGAEDSTS 169
           E+GG PE NPFA G IRV+LR+VR+ QAKARG+PYKK KK+K     +S   ED T+
Sbjct: 129 ENGGLPERNPFAGGGIRVFLREVRDSQAKARGVPYKKRKKRKKRNPMKSHDGEDGTT 185

[Close]

BLAST of Cp4.1LG04g02970.1 vs. TAIR10
Match: AT1G07090.1 (AT1G07090.1 Protein of unknown function (DUF640))

HSP 1 Score: 225.7 bits (574), Expect = 2.3e-59
Identity = 105/150 (70.00%), Postives = 125/150 (83.33%), Query Frame = 1


Query: 8   GSSSTSSPQPGGSIPSRYESQKRRDWNTFCQYLKNQRPPVPLSHCSCNHVLEFLRYLDQF 67
           G S  SSP    + PSRYESQKRRDWNTF QYLKN +PP+ LS CS  HV+EFL+YLDQF
Sbjct: 18  GPSFVSSPP---ATPSRYESQKRRDWNTFLQYLKNHKPPLALSRCSGAHVIEFLKYLDQF 77

Query: 68  GKTKVHVQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEESGGSPETNPFASGA 127
           GKTKVHV  C ++G  +PP+PC+CPL+QAWGSLDALIGRLRAAYEE+GG P++NPFA+ A
Sbjct: 78  GKTKVHVAACPYFGHQQPPSPCSCPLKQAWGSLDALIGRLRAAYEENGGRPDSNPFAARA 137

Query: 128 IRVYLRDVRECQAKARGIPYKKKKKKTTTT 158
           +R+YLR+VRE QAKARGIPY+KKK+K   T
Sbjct: 138 VRIYLREVRESQAKARGIPYEKKKRKRPPT 164

[Close]

BLAST of Cp4.1LG04g02970.1 vs. TAIR10
Match: AT3G23290.2 (AT3G23290.2 Protein of unknown function (DUF640))

HSP 1 Score: 224.9 bits (572), Expect = 3.9e-59
Identity = 108/152 (71.05%), Postives = 124/152 (81.58%), Query Frame = 1


Query: 2   TKDFSEGSSSTSSPQPGGSIPSRYESQKRRDWNTFCQYLKNQRPPVPLSHCSCNHVLEFL 61
           T   +  SSS+SS   G +  SRYE+QKRRDWNTF QYL+N RPP+ LS CS  HVLEFL
Sbjct: 26  TTTTTSSSSSSSSGGSGTNQLSRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFL 85

Query: 62  RYLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEESGGSPETN 121
           RYLDQFGKTKVH   C F+G P PPAPC CPLRQAWGSLDALIGRLRAA+EE+GGSPETN
Sbjct: 86  RYLDQFGKTKVHTHLCPFFGHPNPPAPCACPLRQAWGSLDALIGRLRAAFEENGGSPETN 145

Query: 122 PFASGAIRVYLRDVRECQAKARGIPYKKKKKK 154
           PF + A+R+YLR+VR+ QAKARGI Y+KKK+K
Sbjct: 146 PFGARAVRLYLREVRDSQAKARGISYEKKKRK 177

[Close]

BLAST of Cp4.1LG04g02970.1 vs. TAIR10
Match: AT4G18610.1 (AT4G18610.1 Protein of unknown function (DUF640))

HSP 1 Score: 224.2 bits (570), Expect = 6.7e-59
Identity = 112/162 (69.14%), Postives = 131/162 (80.86%), Query Frame = 1


Query: 2   TKDFSEGSSSTSS-------PQPGGSIPSRYESQKRRDWNTFCQYLKNQRPPVPLSHCSC 61
           TKD  +  SS+S+       PQP   + SRYESQKRRDWNTF QYLK+Q PP+ +S    
Sbjct: 9   TKDPPDHPSSSSNHHKQPLPPQPQQPL-SRYESQKRRDWNTFVQYLKSQNPPLMMSQFDY 68

Query: 62  NHVLEFLRYLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEE- 121
            HVL FLRYLDQFGKTKVH Q C+F+GQP+PP PCTCPL+QAWGSLDALIGRLRAAYEE 
Sbjct: 69  THVLSFLRYLDQFGKTKVHHQACVFFGQPDPPGPCTCPLKQAWGSLDALIGRLRAAYEEH 128

Query: 122 SGGSPETNPFASGAIRVYLRDVRECQAKARGIPYKKKKKKTT 156
            GGSP+TNPFA+G+IRV+LR+VRE QAKARGIPY+KKK++ T
Sbjct: 129 GGGSPDTNPFANGSIRVHLREVRESQAKARGIPYRKKKRRKT 169

[Close]

BLAST of Cp4.1LG04g02970.1 vs. NCBI nr
Match: gi|659110586|ref|XP_008455303.1| (PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 [Cucumis melo])

HSP 1 Score: 309.7 bits (792), Expect = 3.4e-81
Identity = 151/179 (84.36%), Postives = 159/179 (88.83%), Query Frame = 1


Query: 2   TKDFSEGSSSTSS--PQPGGSIPSRYESQKRRDWNTFCQYLKNQRPPVPLSHCSCNHVLE 61
           +KDFSEGSSS+S      G + PSRYESQKRRDWNTFCQYLKNQRPPVPLSHC+CN VLE
Sbjct: 8   SKDFSEGSSSSSGGGSTHGSTTPSRYESQKRRDWNTFCQYLKNQRPPVPLSHCNCNQVLE 67

Query: 62  FLRYLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEESGGSPE 121
           FLRYLDQFGKTKVH+QGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEE+GGS E
Sbjct: 68  FLRYLDQFGKTKVHIQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGSQE 127

Query: 122 TNPFASGAIRVYLRDVRECQAKARGIPYKKKKKKTTTTNQSKGA------EDSTSMMHF 173
           TNPFASGAIRVYLRDVRECQAKARGIPYKKKKKKT+T NQ+KG         STSMMHF
Sbjct: 128 TNPFASGAIRVYLRDVRECQAKARGIPYKKKKKKTSTINQTKGGGHDDQDSSSTSMMHF 186

[Close]

BLAST of Cp4.1LG04g02970.1 vs. NCBI nr
Match: gi|449438107|ref|XP_004136831.1| (PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 [Cucumis sativus])

HSP 1 Score: 302.8 bits (774), Expect = 4.2e-79
Identity = 150/180 (83.33%), Postives = 159/180 (88.33%), Query Frame = 1


Query: 2   TKDFSEGSSSTSS--PQPGGSIPSRYESQKRRDWNTFCQYLKNQRPPVPLSHCSCNHVLE 61
           +KDFSEGSSS+S      G + PSRYESQKRRDWNTFCQYLKNQRPPVPLSHC+CN VLE
Sbjct: 9   SKDFSEGSSSSSGGGSTHGSTTPSRYESQKRRDWNTFCQYLKNQRPPVPLSHCNCNQVLE 68

Query: 62  FLRYLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEESGGSPE 121
           FLRYLDQFGKTKVH+QGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEE+GGS E
Sbjct: 69  FLRYLDQFGKTKVHIQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGSQE 128

Query: 122 TNPFASGAIRVYLRDVRECQAKARGIPYKKKKKKTTTTNQSKGA-------EDSTSMMHF 173
           TNPFASGAIRVYLRDVRECQAKARGIPYKKKKKK TT +Q+KG+         STSMMHF
Sbjct: 129 TNPFASGAIRVYLRDVRECQAKARGIPYKKKKKK-TTISQTKGSGGHDDQDSSSTSMMHF 187

[Close]

BLAST of Cp4.1LG04g02970.1 vs. NCBI nr
Match: gi|356543912|ref|XP_003540402.1| (PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Glycine max])

HSP 1 Score: 290.4 bits (742), Expect = 2.2e-75
Identity = 141/172 (81.98%), Postives = 154/172 (89.53%), Query Frame = 1


Query: 2   TKDFSEGSSS-TSSPQPGGSIPSRYESQKRRDWNTFCQYLKNQRPPVPLSHCSCNHVLEF 61
           +KDF EGSSS T + Q      SRYESQKRRDWNTF QYLKNQRPPVPLS C+CNHVL+F
Sbjct: 6   SKDFGEGSSSPTDNYQQSPGTLSRYESQKRRDWNTFGQYLKNQRPPVPLSQCNCNHVLDF 65

Query: 62  LRYLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEESGGSPET 121
           LRYLDQFGKTKVH+QGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEE+GGSPET
Sbjct: 66  LRYLDQFGKTKVHLQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGSPET 125

Query: 122 NPFASGAIRVYLRDVRECQAKARGIPYKKKKKKTTTTNQSKGAEDSTSMMHF 173
           NPFASG+IRVYL++VRECQAKARGIPYKKKKK    +NQSKG ++S+S MHF
Sbjct: 126 NPFASGSIRVYLKEVRECQAKARGIPYKKKKK---ASNQSKGNDESSSTMHF 174

[Close]

BLAST of Cp4.1LG04g02970.1 vs. NCBI nr
Match: gi|802619176|ref|XP_012075501.1| (PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Jatropha curcas])

HSP 1 Score: 290.0 bits (741), Expect = 2.8e-75
Identity = 140/170 (82.35%), Postives = 152/170 (89.41%), Query Frame = 1


Query: 3   KDFSEGSSSTSSPQPGGSIPSRYESQKRRDWNTFCQYLKNQRPPVPLSHCSCNHVLEFLR 62
           KD +EGS+  ++     + PSRYESQKRRDWNTF QYLKNQRPPVPLS C+CNHVL+FLR
Sbjct: 7   KDLAEGSNEQAA-----ATPSRYESQKRRDWNTFGQYLKNQRPPVPLSQCNCNHVLDFLR 66

Query: 63  YLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEESGGSPETNP 122
           YLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEE+GGSPETNP
Sbjct: 67  YLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGSPETNP 126

Query: 123 FASGAIRVYLRDVRECQAKARGIPYKKKKKKTTTTNQSKGAEDSTSMMHF 173
           FASGAIRVYLR+VR+CQAKARGIPYKKKKKK T    SKG ++STS MHF
Sbjct: 127 FASGAIRVYLREVRDCQAKARGIPYKKKKKKPT---PSKGIDESTSAMHF 168

[Close]

BLAST of Cp4.1LG04g02970.1 vs. NCBI nr
Match: gi|1009128447|ref|XP_015881235.1| (PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 [Ziziphus jujuba])

HSP 1 Score: 289.3 bits (739), Expect = 4.8e-75
Identity = 141/179 (78.77%), Postives = 155/179 (86.59%), Query Frame = 1


Query: 3   KDFSEGSSST---------SSPQPGGSIPSRYESQKRRDWNTFCQYLKNQRPPVPLSHCS 62
           KDF+EGSSS+         +      + PSRYESQKRRDWNTF QYLKNQRPPVPLS C+
Sbjct: 7   KDFAEGSSSSPTDHHHQQQNQQSSSSATPSRYESQKRRDWNTFGQYLKNQRPPVPLSQCN 66

Query: 63  CNHVLEFLRYLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEE 122
           CNHVL+FLRYLDQFGKTKVH+QGCMF+GQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEE
Sbjct: 67  CNHVLDFLRYLDQFGKTKVHLQGCMFFGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEE 126

Query: 123 SGGSPETNPFASGAIRVYLRDVRECQAKARGIPYKKKKKKTTTTNQSKGAEDSTSMMHF 173
           +GGSPETNPFASGAIRVYLR+VRECQAKARGIPYKKKKKK   TNQSKG ++S+S + F
Sbjct: 127 NGGSPETNPFASGAIRVYLREVRECQAKARGIPYKKKKKK---TNQSKGNDESSSTIQF 182

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g02970.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
LSH10_ARATH	4.8e-75	89.12	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 OS=Arabidopsis thaliana GN=LSH10 PE=...	[more]
G1L7_ORYSI	4.7e-62	71.79	Protein G1-like7 OS=Oryza sativa subsp. indica GN=OsI_10694 PE=3 SV=1	[more]
G1L7_ORYSJ	4.7e-62	71.79	Protein G1-like7 OS=Oryza sativa subsp. japonica GN=G1L7 PE=1 SV=1	[more]
G1L8_ORYSJ	4.4e-60	76.64	Protein G1-like8 OS=Oryza sativa subsp. japonica GN=G1L8 PE=1 SV=1	[more]
G1L8_ORYSI	3.7e-59	67.08	Protein G1-like8 OS=Oryza sativa subsp. indica GN=OsI_20303 PE=3 SV=1	[more]

BLAST of Cp4.1LG04g02970.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K2D1_CUCSA	2.9e-79	83.33	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G048120 PE=4 SV=1	[more]
A0A0B2R823_GLYSO	1.5e-75	81.98	Uncharacterized protein OS=Glycine soja GN=glysoja_007674 PE=4 SV=1	[more]
I1LUM7_SOYBN	1.5e-75	81.98	Uncharacterized protein OS=Glycine max GN=GLYMA_12G210800 PE=4 SV=1	[more]
A0A067KTB1_JATCU	2.0e-75	82.35	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11031 PE=4 SV=1	[more]
V4UCN2_9ROSI	1.3e-74	81.18	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016699mg PE=4 SV=1	[more]

BLAST of Cp4.1LG04g02970.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G42610.1	2.7e-76	89.12	Protein of unknown function (DUF640)	[more]
AT1G78815.1	6.1e-60	63.84	Protein of unknown function (DUF640)	[more]
AT1G07090.1	2.3e-59	70.00	Protein of unknown function (DUF640)	[more]
AT3G23290.2	3.9e-59	71.05	Protein of unknown function (DUF640)	[more]
AT4G18610.1	6.7e-59	69.14	Protein of unknown function (DUF640)	[more]

BLAST of Cp4.1LG04g02970.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659110586\|ref\|XP_008455303.1\|	3.4e-81	84.36	PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 [Cucumis melo]	[more]
gi\|449438107\|ref\|XP_004136831.1\|	4.2e-79	83.33	PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 [Cucumis sativus]	[more]
gi\|356543912\|ref\|XP_003540402.1\|	2.2e-75	81.98	PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Glycine max]	[more]
gi\|802619176\|ref\|XP_012075501.1\|	2.8e-75	82.35	PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Jatropha curcas]	[more]
gi\|1009128447\|ref\|XP_015881235.1\|	4.8e-75	78.77	PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR006936	ALOG_dom

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG04g02970	Cp4.1LG04g02970	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG04g02970.1:cds:002	Cp4.1LG04g02970.1:cds:002	CDS
Cp4.1LG04g02970.1:cds:001	Cp4.1LG04g02970.1:cds:001	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG04g02970.1:three_prime_utr:001	Cp4.1LG04g02970.1:three_prime_utr:001	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG04g02970.1	Cp4.1LG04g02970.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006936	ALOG domain	PFAM	PF04852	DUF640	coord: 20..137 score: 8.1
IPR006936	ALOG domain	PROFILE	PS51697	ALOG	coord: 24..151 score: 80
None	No IPR available	PANTHER	PTHR31165	FAMILY NOT NAMED	coord: 1..177 score: 1.1E
None	No IPR available	PANTHER	PTHR31165:SF10	PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-RELATED	coord: 1..177 score: 1.1E