Cp4.1LG04g01880.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTAATCGATGATGGTCACCCTTTTAGATCTTGACTCACACGTAGGATCAAGACTAATGATTTAATTATTTAAATTTATACGTATTTTGTACACTTAAATTTTTATTTATTAAATAAATAAGTTTTTTAATTTTATTTTAATTTTAAAAGAAGGGGCAAAAGGGAGATAAAATCGTAAAACTGAAATGAATCGTCGTCAGGTTTGAAGAATCGCGAACCAGAAAAACCTGAGGCGGAAATTCATGAGATCAATGGATAGAGTATTCTCCGTTGACGGAATCGCCGATCAGTTCTTGTCCTCGCCGCCGCGAGCAGTTCCTACAGAGCCGGAAGAATCGTCGAAATTGAACCGGAGCGCATCGGAATGGTCGTTCCGGCGGTTTCTTCAGGAAGCCTCTGTATCGGACTCCTCGACTTCTCCGCCTCCGCCGCCGGCTTCTCCCTCCCCCGACGATCGATCTGAGAATAAGGAATCTGGAGAAAATGCGAATCAGATTCTGCAGAAACAGAGCAATCGGAATGAAATATGTAGTAGTAGTAGTGCGACGTCGAGGATGGAGAAGATTAAGGCGGCGGAATCCGTCAAGATTGGACCGCCGTGTGTTCCATCGGACTCCGGTGACTATCAGGCGCTTCTGAAAAGCAAGCTCAATTTGGCGTGTGCCGCTGTAGCCTTGTGCCGAGTAAGATTTTATATTTACTTTTTACTTTTTACTTTTTACTTTTTACTTTTTACCTTTTCATTATTTGTAATTTTTACTTTAAAAACTACAAAATTTTATTTCAATAATATTTATAAATATATTTTCATGTGCTTAATCAATTTAAAATATATGTTTTTCTAGATAAATTTTTTAAAAATTTTCAAAAATAGCTTTAATTTTTTTAAAGAAATAAAAAATAAAACGTTTACAAATTTAAAAATTTTAAATTTAGTGGTTGGTGATTAATGTGAAATAGGGGTCTTATATGATGAAAGCTCAAGATTCATGTGCAAGTTCTCCTTTAGCGTCTCAATCTTCAAAAGGTTTGCAATTTTGTTAAGAATTATGCTCTGATACCATGTTAAGAATAAGAAATAGAATTGGGATCGAGAGTGCAGCAAACATTAGTGGGACTTTTGATCCTACCTATGTTTGTTGCACCCTCGATCTAATTTTCATTTTTGTCCACATTTTTACTGTACTTTTTTTTTCTCCTTAAGAGAATATTATTTTTGATGATCATGTTATAAAGATTAATGAACGTTTAGGAATTACTAGCTCACCTTGTGTGCAAAAAAAGGTCGGGATTCTTGGCAGCTCGGCAACTATATCGTCATCCATAGAGCAAACGACTGATGAAGAAGATGATGTCGTTGAAGGAGAAGATGGTACGAGTGAACGTAAGGATCCTGCTTATGCTAAACGTGTCAGGAGGTAAATATTATAACATTTTGACTCTGTTATATTTTATAATTCTATTTTAGTAGAGTAATAAATTGGATCTTTAATGGTCGTGTCTGTTTAGCTTTGTGCCAAATTAGTCCACTTGTCTAGTAAACATGTCACGTCGTCATTCAGTTTGTTTGTGATGGATAATCACGTTGATCAGGATCCATCAAAGGATAATATACAAAAAAGTGTAATAGTCCAAGCGTAACGCTAGCAAATATGTTCTCTTTGGACTTTCCATTCAATGGCTTCCCCTCAAGGTTTTAAAACGCGTCTTCTAGGGAGATATTTTCATACCCTTAATGTTTTGTTGTCCTCTCCAACCGAGGTGGGATTTCACAATCCAACCCTTTTGGGGGCCAGTGTCCTCGTTGGCACACCGTTCGGTGTCTCTAATACCATTTGTAACAACTCAAAGAAGACAATATCTACTAACGGTGGGCTTGAGATGTTACCGTACAACCATTTAAAATGTATGTGCTAGGTAATATGAATATTTGGTTGCACTCGTTTTGTTCGAGATGTCAATCCTCATCGTACCAAGTTAGATCCCAATTCCTTAAAATGCGTATTTCCACGGCGATTCTCATGTCCAAAAGGAATACTGAAGTTGTCCTAGTCTTACCAAGTATTTGTCTCTCTCGATCCAAAGAGATACTAAAATTTCGGTTGGAAAGTTGAGTTATCTGACAGTGACTCGACCAAATATCACTTATTCAACGAGCGTTATAAGTCACTATATGTCTTCACGATTACCAACATGAAGAACCCAATCAAACTCCAACAAAAACCGTTATCGTAGATACTAACACAATTATTTTCTTCAGAATGCTTTCTAACAGAGAATCAGCTAGACGTTCAAGAAAGAGAAAGCAAGCACATTTGACTGAGCTCGAGACACAGGTCAACATCGAACAATATCAAATCTATCTAATTCTAATAAGTCCGTTATAAACTCGATTCGATTCATTGTTGACAGGTTGCTGAATTAAGAGTTGAAAATTCTGCATTGCTGAAGCATTTCAATGATATAAGCCAGAAGTACAATGAATCAGCTGTTAATAACAGAGTTCTAAAAGCTGACCTTGAAACTTTGAAAGCAAAGGTAAGTACAAAGTACTAGCTCGTTCTTCATTCGTTCGGTGTTGATACGACGATGACGAGAACGATGACGTTTTCAGGTACAAATGGCTGAGGAAACCGTAAAGAGAATTACGGGTTCGAAACCGATGTTCTATGGCATGTCGTCGGAAGGATTGTCAATGAGCATGCAATCCTTTGATGGGAGCCCCTCAAAGACATCAAGAGATGCAGCTAGCAATCATGCTGCCGACATATCTTCTGCTGATACTCAGCTGAATTGTGTGGCAAAAGCAGCAACGGTGTCAGGGAAGAAGATGGTGAAAACAGGTTCGTTGCGTCGAGTGGCAAGTTTGGAGCGCCTTCAAAAGCGCATCCGGGGGAGCTCAGGGTGCTGTGAACCATCAGGAAAGGGAGATCACCAATAACAGTGTTGTTTGTTGTTCTTGTTTTAAGTGTATGAAAGGTTTATTCTGTCATATTCTTTGAATGAACCTGATTGTATGTTTGAGGTCAATATCCATCGTCATTCGAACTGAACCTAGATATGATATTGTCCACTGTGAGCATAAACTCTCGTGGTTTTGCTTTTGATTTTTCTAAATGGTCT GTAATCGATGATGGTCACCCTTTTAGATCTTGACTCACACGTAGGATCAAGACTAATGATTTAATTATTTAAATTTATACGTATTTTGTACACTTAAATTTTTATTTATTAAATAAATAAGTTTTTTAATTTTATTTTAATTTTAAAAGAAGGGGCAAAAGGGAGATAAAATCGTAAAACTGAAATGAATCGTCGTCAGGTTTGAAGAATCGCGAACCAGAAAAACCTGAGGCGGAAATTCATGAGATCAATGGATAGAGTATTCTCCGTTGACGGAATCGCCGATCAGTTCTTGTCCTCGCCGCCGCGAGCAGTTCCTACAGAGCCGGAAGAATCGTCGAAATTGAACCGGAGCGCATCGGAATGGTCGTTCCGGCGGTTTCTTCAGGAAGCCTCTGTATCGGACTCCTCGACTTCTCCGCCTCCGCCGCCGGCTTCTCCCTCCCCCGACGATCGATCTGAGAATAAGGAATCTGGAGAAAATGCGAATCAGATTCTGCAGAAACAGAGCAATCGGAATGAAATATGTAGTAGTAGTAGTGCGACGTCGAGGATGGAGAAGATTAAGGCGGCGGAATCCGTCAAGATTGGACCGCCGTGTGTTCCATCGGACTCCGGTGACTATCAGGCGCTTCTGAAAAGCAAGCTCAATTTGGCGTGTGCCGCTGTAGCCTTGTGCCGAGTCGGGATTCTTGGCAGCTCGGCAACTATATCGTCATCCATAGAGCAAACGACTGATGAAGAAGATGATGTCGTTGAAGGAGAAGATGGTACGAGTGAACGTAAGGATCCTGCTTATGCTAAACGTGTCAGGAGAATGCTTTCTAACAGAGAATCAGCTAGACGTTCAAGAAAGAGAAAGCAAGCACATTTGACTGAGCTCGAGACACAGGTACAAATGGCTGAGGAAACCGTAAAGAGAATTACGGGTTCGAAACCGATGTTCTATGGCATGTCGTCGGAAGGATTGTCAATGAGCATGCAATCCTTTGATGGGAGCCCCTCAAAGACATCAAGAGATGCAGCTAGCAATCATGCTGCCGACATATCTTCTGCTGATACTCAGCTGAATTGTGTGGCAAAAGCAGCAACGGTGTCAGGGAAGAAGATGGTGAAAACAGGTTCGTTGCGTCGAGTGGCAAGTTTGGAGCGCCTTCAAAAGCGCATCCGGGGGAGCTCAGGGTGCTGTGAACCATCAGGAAAGGGAGATCACCAATAACAGTGTTGTTTGTTGTTCTTGTTTTAAGTGTATGAAAGGTTTATTCTGTCATATTCTTTGAATGAACCTGATTGTATGTTTGAGGTCAATATCCATCGTCATTCGAACTGAACCTAGATATGATATTGTCCACTGTGAGCATAAACTCTCGTGGTTTTGCTTTTGATTTTTCTAAATGGTCT ATGAGATCAATGGATAGAGTATTCTCCGTTGACGGAATCGCCGATCAGTTCTTGTCCTCGCCGCCGCGAGCAGTTCCTACAGAGCCGGAAGAATCGTCGAAATTGAACCGGAGCGCATCGGAATGGTCGTTCCGGCGGTTTCTTCAGGAAGCCTCTGTATCGGACTCCTCGACTTCTCCGCCTCCGCCGCCGGCTTCTCCCTCCCCCGACGATCGATCTGAGAATAAGGAATCTGGAGAAAATGCGAATCAGATTCTGCAGAAACAGAGCAATCGGAATGAAATATGTAGTAGTAGTAGTGCGACGTCGAGGATGGAGAAGATTAAGGCGGCGGAATCCGTCAAGATTGGACCGCCGTGTGTTCCATCGGACTCCGGTGACTATCAGGCGCTTCTGAAAAGCAAGCTCAATTTGGCGTGTGCCGCTGTAGCCTTGTGCCGAGTCGGGATTCTTGGCAGCTCGGCAACTATATCGTCATCCATAGAGCAAACGACTGATGAAGAAGATGATGTCGTTGAAGGAGAAGATGGTACGAGTGAACGTAAGGATCCTGCTTATGCTAAACGTGTCAGGAGAATGCTTTCTAACAGAGAATCAGCTAGACGTTCAAGAAAGAGAAAGCAAGCACATTTGACTGAGCTCGAGACACAGGTACAAATGGCTGAGGAAACCGTAAAGAGAATTACGGGTTCGAAACCGATGTTCTATGGCATGTCGTCGGAAGGATTGTCAATGAGCATGCAATCCTTTGATGGGAGCCCCTCAAAGACATCAAGAGATGCAGCTAGCAATCATGCTGCCGACATATCTTCTGCTGATACTCAGCTGAATTGTGTGGCAAAAGCAGCAACGGTGTCAGGGAAGAAGATGGTGAAAACAGGTTCGTTGCGTCGAGTGGCAAGTTTGGAGCGCCTTCAAAAGCGCATCCGGGGGAGCTCAGGGTGCTGTGAACCATCAGGAAAGGGAGATCACCAATAA MRSMDRVFSVDGIADQFLSSPPRAVPTEPEESSKLNRSASEWSFRRFLQEASVSDSSTSPPPPPASPSPDDRSENKESGENANQILQKQSNRNEICSSSSATSRMEKIKAAESVKIGPPCVPSDSGDYQALLKSKLNLACAAVALCRVGILGSSATISSSIEQTTDEEDDVVEGEDGTSERKDPAYAKRVRRMLSNRESARRSRKRKQAHLTELETQVQMAEETVKRITGSKPMFYGMSSEGLSMSMQSFDGSPSKTSRDAASNHAADISSADTQLNCVAKAATVSGKKMVKTGSLRRVASLERLQKRIRGSSGCCEPSGKGDHQ
BLAST of Cp4.1LG04g01880.1 vs. Swiss-Prot
Match: CPRF2_PETCR (Light-inducible protein CPRF2 OS=Petroselinum crispum GN=CPRF2 PE=2 SV=2) HSP 1 Score: 98.6 bits (244), Expect = 1.3e-19 Identity = 94/252 (37.30%), Postives = 133/252 (52.78%), Query Frame = 1
BLAST of Cp4.1LG04g01880.1 vs. Swiss-Prot
Match: BZP63_ARATH (Basic leucine zipper 63 OS=Arabidopsis thaliana GN=BZIP63 PE=1 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 6.2e-09 Identity = 65/167 (38.92%), Postives = 82/167 (49.10%), Query Frame = 1
BLAST of Cp4.1LG04g01880.1 vs. Swiss-Prot
Match: BZP25_ARATH (Basic leucine zipper 25 OS=Arabidopsis thaliana GN=BZIP25 PE=1 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 1.3e-06 Identity = 84/266 (31.58%), Postives = 113/266 (42.48%), Query Frame = 1
BLAST of Cp4.1LG04g01880.1 vs. Swiss-Prot
Match: BZP10_ARATH (Basic leucine zipper 10 OS=Arabidopsis thaliana GN=BZIP10 PE=1 SV=2) HSP 1 Score: 53.5 bits (127), Expect = 4.9e-06 Identity = 70/254 (27.56%), Postives = 116/254 (45.67%), Query Frame = 1
BLAST of Cp4.1LG04g01880.1 vs. TrEMBL
Match: A0A0A0M1N8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G573650 PE=4 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 4.3e-41 Identity = 166/390 (42.56%), Postives = 199/390 (51.03%), Query Frame = 1
BLAST of Cp4.1LG04g01880.1 vs. TrEMBL
Match: B9SZ77_RICCO (Light-inducible protein CPRF-2, putative OS=Ricinus communis GN=RCOM_0484650 PE=4 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 4.8e-16 Identity = 75/180 (41.67%), Postives = 103/180 (57.22%), Query Frame = 1
BLAST of Cp4.1LG04g01880.1 vs. TrEMBL
Match: M5VZ41_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005585mg PE=4 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 8.2e-16 Identity = 67/155 (43.23%), Postives = 85/155 (54.84%), Query Frame = 1
BLAST of Cp4.1LG04g01880.1 vs. TrEMBL
Match: A0A0D2R3Q8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G246700 PE=4 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 8.2e-16 Identity = 92/261 (35.25%), Postives = 130/261 (49.81%), Query Frame = 1
BLAST of Cp4.1LG04g01880.1 vs. TrEMBL
Match: A0A0D2S5L8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G246700 PE=4 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 8.2e-16 Identity = 92/261 (35.25%), Postives = 130/261 (49.81%), Query Frame = 1
BLAST of Cp4.1LG04g01880.1 vs. TAIR10
Match: AT5G28770.2 (AT5G28770.2 bZIP transcription factor family protein) HSP 1 Score: 63.2 bits (152), Expect = 3.5e-10 Identity = 65/167 (38.92%), Postives = 82/167 (49.10%), Query Frame = 1
BLAST of Cp4.1LG04g01880.1 vs. TAIR10
Match: AT3G54620.1 (AT3G54620.1 basic leucine zipper 25) HSP 1 Score: 55.5 bits (132), Expect = 7.3e-08 Identity = 84/266 (31.58%), Postives = 113/266 (42.48%), Query Frame = 1
BLAST of Cp4.1LG04g01880.1 vs. TAIR10
Match: AT5G24800.1 (AT5G24800.1 basic leucine zipper 9) HSP 1 Score: 50.8 bits (120), Expect = 1.8e-06 Identity = 37/68 (54.41%), Postives = 44/68 (64.71%), Query Frame = 1
BLAST of Cp4.1LG04g01880.1 vs. NCBI nr
Match: gi|449435740|ref|XP_004135652.1| (PREDICTED: light-inducible protein CPRF2-like [Cucumis sativus]) HSP 1 Score: 176.8 bits (447), Expect = 6.2e-41 Identity = 166/390 (42.56%), Postives = 199/390 (51.03%), Query Frame = 1
BLAST of Cp4.1LG04g01880.1 vs. NCBI nr
Match: gi|659099717|ref|XP_008450742.1| (PREDICTED: light-inducible protein CPRF2-like [Cucumis melo]) HSP 1 Score: 117.9 bits (294), Expect = 3.4e-23 Identity = 78/128 (60.94%), Postives = 93/128 (72.66%), Query Frame = 1
BLAST of Cp4.1LG04g01880.1 vs. NCBI nr
Match: gi|672125325|ref|XP_008786079.1| (PREDICTED: light-inducible protein CPRF2-like isoform X3 [Phoenix dactylifera]) HSP 1 Score: 115.5 bits (288), Expect = 1.7e-22 Identity = 111/285 (38.95%), Postives = 149/285 (52.28%), Query Frame = 1
BLAST of Cp4.1LG04g01880.1 vs. NCBI nr
Match: gi|1009117647|ref|XP_015875429.1| (PREDICTED: light-inducible protein CPRF2 [Ziziphus jujuba]) HSP 1 Score: 103.6 bits (257), Expect = 6.6e-19 Identity = 73/147 (49.66%), Postives = 91/147 (61.90%), Query Frame = 1
BLAST of Cp4.1LG04g01880.1 vs. NCBI nr
Match: gi|971569122|ref|XP_015169057.1| (PREDICTED: light-inducible protein CPRF2-like isoform X1 [Solanum tuberosum]) HSP 1 Score: 101.3 bits (251), Expect = 3.3e-18 Identity = 97/267 (36.33%), Postives = 133/267 (49.81%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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