Cp4.1LG04g01740.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.CAAACACGCCGTACTCTTCACTACCACCACAATATTTCCTCCCGGGAGAGAGAATTCATCCTCAGCCTCATCTTCATCCTCATCATTCCCACCAAAAACCAATCAACAACAAGAAAAAAAAAGGAAGAAAATATCTCAATTTTCCGTTTCATCTTCGCTTCAAAATCCCTCCAAATTCCAGTTCCAAATCTCTAAAATCCATGGTTTCACCTTCATTGCTTGAACCCCATCCATTGAAATGGAACCGATTCCCAGTTCATTTCGTCCATTCTCCTTCTCCATCAACGAGTGGTCGCTGTCATCTCTACAGACCCTTTGTTCTACCCAAGAATTTGAGAATGGGTGGTTCTAGCTCTGTCAAATTCGGTGTTAGATGCTTCTTTTCCAAGGAGGGGGGGAAGAGTTTGACAACTTCGAATTCCAGGTTGGAGCGATTGGTCGATGGAGATAAACCCAAAAGGCCAATGGAGGTAATTGCCAATTCGATTATGAATGCTCTCAAGGCGTTGCGGAAGCCTGCGATTGCTGCGGTGTTGTTGGGATTGCTGTTGATGTACGATCCTAATTCTGCCTTAGCCGCTTCTGGTGGACGTGTTGGAGGAAGTTCGTTTTCGTCGCGCTCGTCTTCGTCTTCGAGGAGTTACTCAACTCCTTCGATGATTTCTGGTTATTCATATTCTGCGCCTTATAGTTCGCCGTCGTTGTTTGGCGGCGGCGGGATTTACGTTGGGCCGGCGGTTGGGGTCGGAGTCGGTGCCGGATCAAGTTTTTTCTTCATATTGGCTGGTTTCGCGGCGTTTCTTCTGGTTTCTGGATTTCTCTCCGATCGGTCCGATAGTAGTGTTCTCACTGCTTCTGAGAAAACTAGCGTGCTTAAACTTCAAGTATGACAAACCCTTCCCTCTCTGTATCTTGTTTTCTGATATATGGATTTTGTGTTACTGTTTACTCTCATTCGTCTTTTGAATCAACGGTTGAAATTCAAAACATGGCTGGGTGTTGTGCATATTCATTATGGATAAACAAGTCGTTTGTCAAGCAAGGATGTAGCCAGTGTTCTTGAAGGATAAAATGTAATGGCCCAAGCCCATGGTCCTCCTTGGGCTTTCCTTTCCGGCTTCCCATCAAGGCTTTCAAAACGCTTCGGCTAGGGAGAGGTTTTCACACCCTTATAAATAATGTTTCGTTCTCTTTCCCAAATGTGGGATCTCACATAAACAGTTGTAGGTTTCTATGTTTAAAATTTAGACCCTTTTGATGCAGACTGAATCTTTTTCGAAAACAACAATATGAACGGAGAATATGAAAAATAGAAGTATGGTTTCTTGCAGTTAACCCGAATGCCCTCATCACCTATGCTCATGGAGGTCATTCTTTTGAAAAGAAGATGATGATCTTGATGTCTGATGTTATAGCATTGCTAGTATTTGTTTTTAGGGTGGGGATGTTTCTTGTTGAAAAGAAATAGAACCTTCAAAGACGTTGAGAGCCCTATTTCTCTTTTTAACTATAGCTTGTCCTATCTTTATCTTAATTGGAAGAGATTTTGTAAATTCCATTTCCCTTGATTGATGCTCCCCTCTCCCTTTGTAGGTTTTTTAAATTATTTTAATGGAAAGTTCCTTTGGTTTCTTACGGCACAAAAAAGGTTGTAAAGTTCATTTCACGATTTGAAAAAAAAAATGTAATGATGTACTGGCACAGTGTAGAAAACTTGGTTTCTGTAGTCATGAATTATTGATTTTCTTGTAGGATAGATGAATGCAGATTCTAGAGTTACAATTTACTTTATGAAAAATTTCTACAAGTATGTCATCATTCTTAACTCATGGCACAACTCTCTCTCTCTCTCTCTCTAGGTTGGGTTGTTGGGCATGGGCCGGGGACTCCAAAGAGATCTAAATAGAATTGCTGAAAGTGCTGATACATCAACCCCTGAGGGTTTGAGCTATGTACTAACTGGTAAACTATTGATTTCTTCCTCTCGAGATTAATTACCTCGCTCACTGATTCCTTTAATAAAACAAGCAGTAAACTGGTACTGTTAGTCCCTGCATGTTAGAAGATACTATAGAAAAATAAAAGACCCTAATAACAATGATGCCATCTTACGTTTTCTGAAACTGTTTCCAGCAGGTGTCGTAAAACAAATTTTCTAAGTCAATATTGTTATTTGTTTCGGAACTGTTTAAAATTCTTCCAGAATGGTTTATAGAGATTTCTTTAAGCAGCAATCACATGCATACCCTTCTGTTGTGCAGTTAAAGTAACTTATTCTCTATGTAATTTTTGTTTTCCCCTTTGGGTTGCAGAAACGATTCTTGCGCTACTTCGACATCCTGATTATTGCATTTCAGGTTATTCATCTGTAAGTCCCACTATGTCCTTGGAGACTGCCTGATCTAGTTGCACAGAGTTAACACATGCATATTAATTATGTATTGAGGGTTGCTGGGTACTAGTGGTGATTGTTCATGCCTGTTTATGAATAGAACACATTGATAAGGCAGGGGAATGTAAAATGAGATACTTCAATAAACGAACATAGTACACAACAAAATCAATAGACTACGAACACCTTTACAATCAAGAACAGCCTGATGAGTTGAATCTTTGAATAGTTATACTAAACTTGCTCAAATGGCAAGAATATGTTATCAAGAAAGTTGTTTCTCAGATTTGTAGTCAACAAATTTTTAACTATATTAGATTCGGATCATGTTTTCACTGAAGAAATTTCATTTTTCAAAGGATCCCACTACCTTTCATTCTCTCTCACATCATGTTGATGATTGTGATGTTGCATTTGAAATTAGTTTGACTAGTATGGAATCTTTTAAGCTTATAAATGTAACTCTTCAGGTTTAGAATTCTGATTGAAAAGCTTGCTAAAAGAAAACTTTTGATATCTCCTAGAAATGGAATTTTAGTGCATGAACTTGCTAGGTCTTCAATGGATTAGTGGGGTGGACTTTGTATAAGCTGCTTAGCTATGTTATGCTCTTAATTAGTGGCATATATAGCCTCCCCATTTTGCCTACACGATATTGTGGTGGTGAAGTTTCTTCTCCTATTCTTGTTTCCAATGAGAATGCTTATTATCACATTCTTCTTTGAATTATTTCTCACAAGGCTTGCTAGCCTTAGTTGGTATTGGAAGCTTAATCTCACTCTTTTTGGAAAAAACTTAGATGGATCTGAAACGTAGTATAGAAGATGGAGAGAAGCGTTTCAATAAACTATCAATTGAAGAGCGAGGGAAATTTGATGAGGAAACTCTTGTCAACGTGAATAGCATCAAAAGACAGAGTACAAGCAGCCAGAGAACAAGTGGATTTAGCAATGAATACATTGTGGTTAGTTTCACTTGGCCTTGAGTTTTATGCAATGTATACTATTCTACATTATTTTTTGTCTTGATTTTTCTTGCTGTGCTGATTTAGACTATGTTTTTTGGTGTATTCTTTCTCTTGATTTTTGTGAGGTGTGTGTGGTAATATTGGAAAACCACTCATTTTAGAGAAAAAAAACGTGATGTTCCGTTTCTCTTATTCATAATTGAAGTTTTTTTCTCGATTAAAGCAGAACACTTCTGGAATGTAATTCAGATTTTATTTTGATGATTGGTTACTAAGAGGTGCATTCGTTTTGCTGGAATGATAATCTGATATTCATGAGAGAAAAGACCACGGTTTCCTTTCTTCTACCCTTTGATCACAATATTTTGAATATTAGATAACAATATTGGTGGCTGCTGAGGGAGTGCACAAGCTACCTGCTATCAATGGTAGTGGGGACTTGAAGGAAGCTTTGCAAAAACTAGCATCTATTCCTTCCAGCAAAATATTGGTAAGTTGGTATTTTAGGCCCAATAATCATTTCTATTTTAGCTTTTTTGTTTTTGAAAATTAAATTTGTTTTTTCCCAGTTTCTTCATAGTTGGTCCTACCTATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGGAAACCAAAATTCAAAAACAAAAATAAGACTTTAAAAACTACTTTTTTTAGTGTTCAAAAGTTGTTTGAGTTTTGAAAACATTGGTCAAAAGTAGATAACAAATTGAAGAATCTCATCTCATGGGAGTGATTTTGTAAGTTTCATTTTAAATGACTAAAAACCAAAAGCAAAAGTTCTGTTTATTCTTAGATCTCAAAGTCTATTCTGTTTGCATGCAGGCAGTTGAGGTTTTATGGACGCCGCAGAACGAGAACGACACGTTGTCCGAGCGTGAACTCCTGGAAGATTATCCACTTCTAAGGCCTCTATAA CAAACACGCCGTACTCTTCACTACCACCACAATATTTCCTCCCGGGAGAGAGAATTCATCCTCAGCCTCATCTTCATCCTCATCATTCCCACCAAAAACCAATCAACAACAAGAAAAAAAAAGGAAGAAAATATCTCAATTTTCCGTTTCATCTTCGCTTCAAAATCCCTCCAAATTCCAGTTCCAAATCTCTAAAATCCATGGTTTCACCTTCATTGCTTGAACCCCATCCATTGAAATGGAACCGATTCCCAGTTCATTTCGTCCATTCTCCTTCTCCATCAACGAGTGGTCGCTGTCATCTCTACAGACCCTTTGTTCTACCCAAGAATTTGAGAATGGGTGGTTCTAGCTCTGTCAAATTCGGTGTTAGATGCTTCTTTTCCAAGGAGGGGGGGAAGAGTTTGACAACTTCGAATTCCAGGTTGGAGCGATTGGTCGATGGAGATAAACCCAAAAGGCCAATGGAGGTAATTGCCAATTCGATTATGAATGCTCTCAAGGCGTTGCGGAAGCCTGCGATTGCTGCGGTGTTGTTGGGATTGCTGTTGATGTACGATCCTAATTCTGCCTTAGCCGCTTCTGGTGGACGTGTTGGAGGAAGTTCGTTTTCGTCGCGCTCGTCTTCGTCTTCGAGGAGTTACTCAACTCCTTCGATGATTTCTGGTTATTCATATTCTGCGCCTTATAGTTCGCCGTCGTTGTTTGGCGGCGGCGGGATTTACGTTGGGCCGGCGGTTGGGGTCGGAGTCGGTGCCGGATCAAGTTTTTTCTTCATATTGGCTGGTTTCGCGGCGTTTCTTCTGGTTTCTGGATTTCTCTCCGATCGGTCCGATAGTAGTGTTCTCACTGCTTCTGAGAAAACTAGCGTGCTTAAACTTCAAGTTGGGTTGTTGGGCATGGGCCGGGGACTCCAAAGAGATCTAAATAGAATTGCTGAAAGTGCTGATACATCAACCCCTGAGGGTTTGAGCTATGTACTAACTGAAACGATTCTTGCGCTACTTCGACATCCTGATTATTGCATTTCAGGTTATTCATCTATGGATCTGAAACGTAGTATAGAAGATGGAGAGAAGCGTTTCAATAAACTATCAATTGAAGAGCGAGGGAAATTTGATGAGGAAACTCTTGTCAACGTGAATAGCATCAAAAGACAGAGTACAAGCAGCCAGAGAACAAGTGGATTTAGCAATGAATACATTGTGATAACAATATTGGTGGCTGCTGAGGGAGTGCACAAGCTACCTGCTATCAATGGTAGTGGGGACTTGAAGGAAGCTTTGCAAAAACTAGCATCTATTCCTTCCAGCAAAATATTGAACGAGAACGACACGTTGTCCGAGCGTGAACTCCTGGAAGATTATCCACTTCTAAGGCCTCTATAA ATGGTTTCACCTTCATTGCTTGAACCCCATCCATTGAAATGGAACCGATTCCCAGTTCATTTCGTCCATTCTCCTTCTCCATCAACGAGTGGTCGCTGTCATCTCTACAGACCCTTTGTTCTACCCAAGAATTTGAGAATGGGTGGTTCTAGCTCTGTCAAATTCGGTGTTAGATGCTTCTTTTCCAAGGAGGGGGGGAAGAGTTTGACAACTTCGAATTCCAGGTTGGAGCGATTGGTCGATGGAGATAAACCCAAAAGGCCAATGGAGGTAATTGCCAATTCGATTATGAATGCTCTCAAGGCGTTGCGGAAGCCTGCGATTGCTGCGGTGTTGTTGGGATTGCTGTTGATGTACGATCCTAATTCTGCCTTAGCCGCTTCTGGTGGACGTGTTGGAGGAAGTTCGTTTTCGTCGCGCTCGTCTTCGTCTTCGAGGAGTTACTCAACTCCTTCGATGATTTCTGGTTATTCATATTCTGCGCCTTATAGTTCGCCGTCGTTGTTTGGCGGCGGCGGGATTTACGTTGGGCCGGCGGTTGGGGTCGGAGTCGGTGCCGGATCAAGTTTTTTCTTCATATTGGCTGGTTTCGCGGCGTTTCTTCTGGTTTCTGGATTTCTCTCCGATCGGTCCGATAGTAGTGTTCTCACTGCTTCTGAGAAAACTAGCGTGCTTAAACTTCAAGTTGGGTTGTTGGGCATGGGCCGGGGACTCCAAAGAGATCTAAATAGAATTGCTGAAAGTGCTGATACATCAACCCCTGAGGGTTTGAGCTATGTACTAACTGAAACGATTCTTGCGCTACTTCGACATCCTGATTATTGCATTTCAGGTTATTCATCTATGGATCTGAAACGTAGTATAGAAGATGGAGAGAAGCGTTTCAATAAACTATCAATTGAAGAGCGAGGGAAATTTGATGAGGAAACTCTTGTCAACGTGAATAGCATCAAAAGACAGAGTACAAGCAGCCAGAGAACAAGTGGATTTAGCAATGAATACATTGTGATAACAATATTGGTGGCTGCTGAGGGAGTGCACAAGCTACCTGCTATCAATGGTAGTGGGGACTTGAAGGAAGCTTTGCAAAAACTAGCATCTATTCCTTCCAGCAAAATATTGAACGAGAACGACACGTTGTCCGAGCGTGAACTCCTGGAAGATTATCCACTTCTAAGGCCTCTATAA MVSPSLLEPHPLKWNRFPVHFVHSPSPSTSGRCHLYRPFVLPKNLRMGGSSSVKFGVRCFFSKEGGKSLTTSNSRLERLVDGDKPKRPMEVIANSIMNALKALRKPAIAAVLLGLLLMYDPNSALAASGGRVGGSSFSSRSSSSSRSYSTPSMISGYSYSAPYSSPSLFGGGGIYVGPAVGVGVGAGSSFFFILAGFAAFLLVSGFLSDRSDSSVLTASEKTSVLKLQVGLLGMGRGLQRDLNRIAESADTSTPEGLSYVLTETILALLRHPDYCISGYSSMDLKRSIEDGEKRFNKLSIEERGKFDEETLVNVNSIKRQSTSSQRTSGFSNEYIVITILVAAEGVHKLPAINGSGDLKEALQKLASIPSSKILNENDTLSERELLEDYPLLRPL
BLAST of Cp4.1LG04g01740.1 vs. TrEMBL
Match: W9R6R7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_006177 PE=4 SV=1) HSP 1 Score: 478.8 bits (1231), Expect = 6.4e-132 Identity = 285/409 (69.68%), Postives = 318/409 (77.75%), Query Frame = 1
BLAST of Cp4.1LG04g01740.1 vs. TrEMBL
Match: M5VZ21_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005402mg PE=4 SV=1) HSP 1 Score: 476.1 bits (1224), Expect = 4.2e-131 Identity = 285/413 (69.01%), Postives = 314/413 (76.03%), Query Frame = 1
BLAST of Cp4.1LG04g01740.1 vs. TrEMBL
Match: A0A067JUH0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23463 PE=4 SV=1) HSP 1 Score: 474.6 bits (1220), Expect = 1.2e-130 Identity = 280/410 (68.29%), Postives = 314/410 (76.59%), Query Frame = 1
BLAST of Cp4.1LG04g01740.1 vs. TrEMBL
Match: A0A061F284_THECC (Myelin-associated oligodendrocyte basic protein isoform 1 OS=Theobroma cacao GN=TCM_026403 PE=4 SV=1) HSP 1 Score: 471.5 bits (1212), Expect = 1.0e-129 Identity = 290/410 (70.73%), Postives = 316/410 (77.07%), Query Frame = 1
BLAST of Cp4.1LG04g01740.1 vs. TrEMBL
Match: A9PJ10_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1) HSP 1 Score: 465.7 bits (1197), Expect = 5.6e-128 Identity = 270/421 (64.13%), Postives = 315/421 (74.82%), Query Frame = 1
BLAST of Cp4.1LG04g01740.1 vs. TAIR10
Match: AT1G54520.1 (AT1G54520.1 unknown protein) HSP 1 Score: 404.4 bits (1038), Expect = 7.8e-113 Identity = 252/411 (61.31%), Postives = 289/411 (70.32%), Query Frame = 1
BLAST of Cp4.1LG04g01740.1 vs. NCBI nr
Match: gi|449449537|ref|XP_004142521.1| (PREDICTED: uncharacterized protein LOC101210275 [Cucumis sativus]) HSP 1 Score: 637.1 bits (1642), Expect = 2.0e-179 Identity = 347/406 (85.47%), Postives = 371/406 (91.38%), Query Frame = 1
BLAST of Cp4.1LG04g01740.1 vs. NCBI nr
Match: gi|823196285|ref|XP_012492877.1| (PREDICTED: uncharacterized protein LOC105804719 isoform X1 [Gossypium raimondii]) HSP 1 Score: 486.1 bits (1250), Expect = 5.8e-134 Identity = 287/407 (70.52%), Postives = 318/407 (78.13%), Query Frame = 1
BLAST of Cp4.1LG04g01740.1 vs. NCBI nr
Match: gi|1009117523|ref|XP_015875363.1| (PREDICTED: uncharacterized protein LOC107412168 [Ziziphus jujuba]) HSP 1 Score: 486.1 bits (1250), Expect = 5.8e-134 Identity = 286/411 (69.59%), Postives = 315/411 (76.64%), Query Frame = 1
BLAST of Cp4.1LG04g01740.1 vs. NCBI nr
Match: gi|703076158|ref|XP_010090270.1| (hypothetical protein L484_006177 [Morus notabilis]) HSP 1 Score: 478.8 bits (1231), Expect = 9.2e-132 Identity = 285/409 (69.68%), Postives = 318/409 (77.75%), Query Frame = 1
BLAST of Cp4.1LG04g01740.1 vs. NCBI nr
Match: gi|470132290|ref|XP_004302018.1| (PREDICTED: uncharacterized protein LOC101293892 [Fragaria vesca subsp. vesca]) HSP 1 Score: 478.8 bits (1231), Expect = 9.2e-132 Identity = 284/413 (68.77%), Postives = 324/413 (78.45%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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