Cp4.1LG04g00510.1 (mRNA) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG04g00510.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Small rubber particle protein
Location	Cp4.1LG04 : 1579996 .. 1582153 (+)
Sequence length	1401

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCCGTATCGGATCCCTCGAAGTGAACGACGCGTAAGGGAGAGTCAATGTCTTCCATTTGACTTTCTAGATCTACGCTCCCATTAAGCTTCCAGTTTCCACCATGGCCGTCCGTTTCGACCGACTCTCAACCTGCGTTCTTCTCCCCTATAAATTCCCTTTCCTTCTCCTCTTCCTCTTCCATCGATTCTATCGCTAAGCATTTCGATTTCCCTACAAAATCAATCATCTAATCGCATCTTTCTTCCGTTTTCAATCTCAAGCTCCTCTGAATTTCCCCCACGTTTTTTCGCTATGGCTGATTCCAATCCTTCGTCGCAGCACCAAGAAATGGTACGATTCTCTCATCACTCGAATTTCTTGTGGTTTGTGTTATTGATTTAATTGGATTTGTCGATTTTGTGCGGAATTTCTGTTTTCTGAGATTGTGAGGATTGATTGATTGGATTTTGTGTAGGCGGCTAGGGCAGAGGAGGAGAGGCTGAAGTATTTGGAGTTTGTTCAAACGGCGGCGTTTCGAGCGACGGAGTGTTTCTTCAACGTTTATGGCTATGCGAAGAACCGGATTGGTCCACTGAGGCCCGGCGTTGAGACTGTCGAGGGCACTGTGAAGTCTGTTGTCGGTCCTTTGTACAATAAGTTCCACGGCGTTCCGATTGAGGTTCTTAAGTTCGTCGATCGCAAGGTTGGTTTTCTTTCTTCTGTTACTGTTCTATGCATGTTCTTCATATAAATTTCTCTTCGGTTTCTTCTCGGATTGATTTATCAGATGCCTTTGGTCAATTATCAATTTCAGCCTGTGGATTAAAACTTCTCAATTAAGTAATTCTATGGAAAGTCTAAATGAATTTCTGTGGAGATTAAATTCCTAATATACTGTAGACTTTTCGTTTTGGTCCTTGAACTCCAAACATACTTTCCCTTGGCATGGCTTCAAGTATCTTTGTTCAATATGGACATGTTACATGTATAAGGTTGAGTATTATTTGAGTTTATGCTAGAAGAATCGAAATGGATGTTTTCTAAAAAAGTTCCAAGGATCAAATGAAGATTATACCAATTTTGTAGTAGAAATATCAGAATGGAATTCAAATCAGTTTGTTCATACAAAGTTGATATGTTAGGTAGCATTTTGTGTGCATTTCGAATTCTAATGGAAGAACGTGATGAGAAAACTGAGAATTTACAGGATTGAGGTTGAGATTAGCAAAAAGGATTTTGTATTGTTAGTTCTTTCCCCTTGGAATGATGCAAAAGACCAAAAACGTTGAATGCTAAAACACTGAGAAACTTATGTTCTTTGATTGTTAATGTATAGGTTGACGAGTCGGTGACCAAGATCGATCGCCATGTACCGCCAACCATCAAGCAAGCCTCATCGCAGGCCATGTCTGCTGCACAGCAAGCGCCTGAAATTGCCCGAAATGTAGCCTTGGAGGTCAGACACACTGGCCTTAAAGACTCTGTCTCTGGCATTGTGAAATCTGTGTATGCCAAGTACGAGCCAACTGCTAAGCAACTCTACTCCAAATACGAGCCGAAGGCCGAGCAATGCGCAGCTTCGGCATGGCACAGACTCAACCAGCTCCCTGTTTTCCCCACTGTCGCACAAGCCATCTTGCCAACTGCAGTGTACTGCACCGAGAAATACAACGAGACCGTGCAAAGCACCTCCAAGAAGGGCTACAAGGTCTCTTCGTACCTTCCGTTGGTCCCTACTGAGAGGATTGCCAAAGTGTTCAGCAAGGACAGAATTGAGATGGAGCCCTTGGTGAATTGAGAGTCCTTGGATTTCCTGGTTTCGAAATAACACATTATGAATGTTTTTGTTGAATGGAGGCACACTTATATGTTGGTGGTTGTCATCCTCTCTGAGCCTTGTGTTGTTTTGGCTTCAGATATAGCTATGGCTTTTATGTTTCTTCTTTGATAAGAGATATTAGTTACACAGGTTTGATATTATATTTGAAGGCTTAATTAATTCCTGTAGTCTCTGTTTCAGATTAACTTTCTTCCTACTTAGGTATAATATTGGATGGGTGGACGAAATGTTTTTTATAAATATTTTTTATAAGGTGTGAAAGCTTATCATGAGGCTAATAGCCATATGTAACAGGTTGAAGTGGATAATATCGATGGTAGACTTTAGCTGTTACAAT

mRNA sequence

ATCCGTATCGGATCCCTCGAAGTGAACGACGCGTAAGGGAGAGTCAATGTCTTCCATTTGACTTTCTAGATCTACGCTCCCATTAAGCTTCCAGTTTCCACCATGGCCGTCCGTTTCGACCGACTCTCAACCTGCGTTCTTCTCCCCTATAAATTCCCTTTCCTTCTCCTCTTCCTCTTCCATCGATTCTATCGCTAAGCATTTCGATTTCCCTACAAAATCAATCATCTAATCGCATCTTTCTTCCGTTTTCAATCTCAAGCTCCTCTGAATTTCCCCCACGTTTTTTCGCTATGGCTGATTCCAATCCTTCGTCGCAGCACCAAGAAATGGCGGCTAGGGCAGAGGAGGAGAGGCTGAAGTATTTGGAGTTTGTTCAAACGGCGGCGTTTCGAGCGACGGAGTGTTTCTTCAACGTTTATGGCTATGCGAAGAACCGGATTGGTCCACTGAGGCCCGGCGTTGAGACTGTCGAGGGCACTGTGAAGTCTGTTGTCGGTCCTTTGTACAATAAGTTCCACGGCGTTCCGATTGAGGTTCTTAAGTTCGTCGATCGCAAGGTTGACGAGTCGGTGACCAAGATCGATCGCCATGTACCGCCAACCATCAAGCAAGCCTCATCGCAGGCCATGTCTGCTGCACAGCAAGCGCCTGAAATTGCCCGAAATGTAGCCTTGGAGGTCAGACACACTGGCCTTAAAGACTCTGTCTCTGGCATTGTGAAATCTGTGTATGCCAAGTACGAGCCAACTGCTAAGCAACTCTACTCCAAATACGAGCCGAAGGCCGAGCAATGCGCAGCTTCGGCATGGCACAGACTCAACCAGCTCCCTGTTTTCCCCACTGTCGCACAAGCCATCTTGCCAACTGCAGTGTACTGCACCGAGAAATACAACGAGACCGTGCAAAGCACCTCCAAGAAGGGCTACAAGGTCTCTTCGTACCTTCCGTTGGTCCCTACTGAGAGGATTGCCAAAGTGTTCAGCAAGGACAGAATTGAGATGGAGCCCTTGGTGAATTGAGAGTCCTTGGATTTCCTGGTTTCGAAATAACACATTATGAATGTTTTTGTTGAATGGAGGCACACTTATATGTTGGTGGTTGTCATCCTCTCTGAGCCTTGTGTTGTTTTGGCTTCAGATATAGCTATGGCTTTTATGTTTCTTCTTTGATAAGAGATATTAGTTACACAGGTTTGATATTATATTTGAAGGCTTAATTAATTCCTGTAGTCTCTGTTTCAGATTAACTTTCTTCCTACTTAGGTATAATATTGGATGGGTGGACGAAATGTTTTTTATAAATATTTTTTATAAGGTGTGAAAGCTTATCATGAGGCTAATAGCCATATGTAACAGGTTGAAGTGGATAATATCGATGGTAGACTTTAGCTGTTACAAT

Coding sequence (CDS)

ATGGCTGATTCCAATCCTTCGTCGCAGCACCAAGAAATGGCGGCTAGGGCAGAGGAGGAGAGGCTGAAGTATTTGGAGTTTGTTCAAACGGCGGCGTTTCGAGCGACGGAGTGTTTCTTCAACGTTTATGGCTATGCGAAGAACCGGATTGGTCCACTGAGGCCCGGCGTTGAGACTGTCGAGGGCACTGTGAAGTCTGTTGTCGGTCCTTTGTACAATAAGTTCCACGGCGTTCCGATTGAGGTTCTTAAGTTCGTCGATCGCAAGGTTGACGAGTCGGTGACCAAGATCGATCGCCATGTACCGCCAACCATCAAGCAAGCCTCATCGCAGGCCATGTCTGCTGCACAGCAAGCGCCTGAAATTGCCCGAAATGTAGCCTTGGAGGTCAGACACACTGGCCTTAAAGACTCTGTCTCTGGCATTGTGAAATCTGTGTATGCCAAGTACGAGCCAACTGCTAAGCAACTCTACTCCAAATACGAGCCGAAGGCCGAGCAATGCGCAGCTTCGGCATGGCACAGACTCAACCAGCTCCCTGTTTTCCCCACTGTCGCACAAGCCATCTTGCCAACTGCAGTGTACTGCACCGAGAAATACAACGAGACCGTGCAAAGCACCTCCAAGAAGGGCTACAAGGTCTCTTCGTACCTTCCGTTGGTCCCTACTGAGAGGATTGCCAAAGTGTTCAGCAAGGACAGAATTGAGATGGAGCCCTTGGTGAATTGA

Protein sequence

MADSNPSSQHQEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETVEGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAPEIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLPVFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPLVN

Homology

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BLAST of Cp4.1LG04g00510.1 vs. Swiss-Prot
Match: Y3550_ARATH (REF/SRPP-like protein At3g05500 OS=Arabidopsis thaliana GN=At3g05500 PE=1 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 3.0e-77
Identity = 140/240 (58.33%), Postives = 189/240 (78.75%), Query Frame = 1


Query: 1   MADSNPSSQHQEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV 60
           MA     +Q +    + E+ERLKYL+FVQ AA  A   F  +Y  AK++ GPL+PGVE+V
Sbjct: 1   MATQTDLAQPKLDMTKEEKERLKYLQFVQAAAVEALLRFALIYAKAKDKSGPLKPGVESV 60

Query: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAP 120
           EG VK+VVGP+Y K+H VP+EVLK++D+KVD SVT++DR VPP +KQ S+QA+SAAQ AP
Sbjct: 61  EGAVKTVVGPVYEKYHDVPVEVLKYMDQKVDMSVTELDRRVPPVVKQVSAQAISAAQIAP 120

Query: 121 EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 180
            +AR +A EVR  G+ ++ SG+ KSVY+KYEP AK+LY+ YEPKAEQCA SAW +LNQLP
Sbjct: 121 IVARALASEVRRAGVVETASGMAKSVYSKYEPAAKELYANYEPKAEQCAVSAWKKLNQLP 180

Query: 181 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 240
           +FP +AQ  +PTA +C+EKYN+TV   ++KGY+V+SY+PLVPTERI+K+F++++ E EPL
Sbjct: 181 LFPRLAQVAVPTAAFCSEKYNDTVVKAAEKGYRVTSYMPLVPTERISKIFAEEKAETEPL 240

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BLAST of Cp4.1LG04g00510.1 vs. Swiss-Prot
Match: SRP_VITRI (Stress-related protein OS=Vitis riparia GN=SRP PE=2 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 6.8e-69
Identity = 131/230 (56.96%), Postives = 174/230 (75.65%), Query Frame = 1


Query: 1   MADSNPSSQHQEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV 60
           MA+S    Q + +    EE+RLKYL+FVQ AA     CF ++Y YAK   GPL+PGV+TV
Sbjct: 1   MAESEAKQQPETV--HGEEKRLKYLDFVQVAAIYVIVCFSSLYEYAKENSGPLKPGVQTV 60

Query: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAP 120
           EGTVK+V+GP+Y KF+ VP E+L FVDRKV+ S+ +++RHVP  +K+AS QA++ AQ+AP
Sbjct: 61  EGTVKTVIGPVYEKFYDVPFELLMFVDRKVEASIYELERHVPSLVKRASCQAITVAQKAP 120

Query: 121 EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 180
           E+A  VA EV+  G+ D+   I K+VY+K EPTAK+L SKYEP AEQ A SAW  LN+LP
Sbjct: 121 ELALAVASEVQRPGVVDTAKNITKNVYSKCEPTAKELCSKYEPVAEQYAVSAWRSLNRLP 180

Query: 181 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVF 231
           +FP VAQ ++PTA Y +EKYN++V  T+++GY V+ YLPL+PTERIAKVF
Sbjct: 181 LFPQVAQVVVPTAAYWSEKYNQSVSYTAERGYTVALYLPLIPTERIAKVF 228

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BLAST of Cp4.1LG04g00510.1 vs. Swiss-Prot
Match: Y5513_ORYSI (REF/SRPP-like protein OsI_017815 OS=Oryza sativa subsp. indica GN=OsI_017815 PE=3 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 7.0e-58
Identity = 115/219 (52.51%), Postives = 154/219 (70.32%), Query Frame = 1


Query: 12  EMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETVEGTVKSVVGPL 71
           EM A AEEERL+YLEFVQ AA +        Y YAK   GPLRPGV+ VEGTVK+VVGP+
Sbjct: 25  EMEAAAEEERLRYLEFVQQAAAQVLVLAAAAYAYAKQGAGPLRPGVDHVEGTVKAVVGPV 84

Query: 72  YNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAPEIARNVALEVR 131
           Y++FHGVP+++LKF+DRKV ESV ++DR VPP +K           +AP +AR+ A EVR
Sbjct: 85  YDRFHGVPLDLLKFLDRKVGESVQELDRRVPPVVK-----------EAPGLARSAAAEVR 144

Query: 132 HTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLPVFPTVAQAILP 191
             GL  + +G+ KS  A+ EP A+ LY++YEP AE+ AA AW  LN+LP+ P+V +A+LP
Sbjct: 145 QAGLVGTATGLAKSAIARAEPRARDLYTRYEPVAERKAAEAWAALNRLPLVPSVTRAVLP 204

Query: 192 TAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVF 231
            A   + +YN  V   +K+G  V++YLPLVPTER+++VF
Sbjct: 205 AAASLSARYNTAVADGAKRGSAVATYLPLVPTERLSRVF 232

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BLAST of Cp4.1LG04g00510.1 vs. Swiss-Prot
Match: Y5513_ORYSJ (REF/SRPP-like protein Os05g0151300/LOC_Os05g05940 OS=Oryza sativa subsp. japonica GN=Os05g0151300 PE=2 SV=2)

HSP 1 Score: 225.3 bits (573), Expect = 7.0e-58
Identity = 115/219 (52.51%), Postives = 154/219 (70.32%), Query Frame = 1


Query: 12  EMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETVEGTVKSVVGPL 71
           EM A AEEERL+YLEFVQ AA +        Y YAK   GPLRPGV+ VEGTVK+VVGP+
Sbjct: 25  EMEAAAEEERLRYLEFVQQAAAQVLVLAAAAYAYAKQGAGPLRPGVDHVEGTVKAVVGPV 84

Query: 72  YNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAPEIARNVALEVR 131
           Y++FHGVP+++LKF+DRKV ESV ++DR VPP +K           +AP +AR+ A EVR
Sbjct: 85  YDRFHGVPLDLLKFLDRKVGESVQELDRRVPPVVK-----------EAPGLARSAAAEVR 144

Query: 132 HTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLPVFPTVAQAILP 191
             GL  + +G+ KS  A+ EP A+ LY++YEP AE+ AA AW  LN+LP+ P+V +A+LP
Sbjct: 145 QAGLVGTATGLAKSAIARAEPRARDLYTRYEPVAERKAAEAWAALNRLPLVPSVTRAVLP 204

Query: 192 TAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVF 231
            A   + +YN  V   +K+G  V++YLPLVPTER+++VF
Sbjct: 205 AAASLSARYNTAVADGAKRGSAVATYLPLVPTERLSRVF 232

[Close]

BLAST of Cp4.1LG04g00510.1 vs. Swiss-Prot
Match: SRPP_HEVBR (Small rubber particle protein OS=Hevea brasiliensis GN=SRPP PE=1 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 7.5e-52
Identity = 110/221 (49.77%), Postives = 146/221 (66.06%), Query Frame = 1


Query: 13  MAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETVEGTVKSVVGPLY 72
           MA   EEERLKYL+FV+ A   A + F  +Y YAK+  GPL+PGV+T+E  VK+VV P+Y
Sbjct: 1   MAEEVEEERLKYLDFVRAAGVYAVDSFSTLYLYAKDISGPLKPGVDTIENVVKTVVTPVY 60

Query: 73  NKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAPEIARNVALEVRH 132
                +P+E +KFVD+ VD SVT +D  VPP IKQ S+Q  S AQ AP I  +VA  V +
Sbjct: 61  Y----IPLEAVKFVDKTVDVSVTSLDGVVPPVIKQVSAQTYSVAQDAPRIVLDVASSVFN 120

Query: 133 TGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLPVFPTVAQAILPT 192
           TG+++                AK LY+  EPKAEQ A   W  LN+LP+ P VA  ++PT
Sbjct: 121 TGVQEG---------------AKALYANLEPKAEQYAVITWRALNKLPLVPQVANVVVPT 180

Query: 193 AVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKD 234
           AVY +EKYN+ V+ T+++GY+VSSYLPL+PTE+I KVF  +
Sbjct: 181 AVYFSEKYNDVVRGTTEQGYRVSSYLPLLPTEKITKVFGDE 202

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BLAST of Cp4.1LG04g00510.1 vs. TrEMBL
Match: A0A0A0M1J0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G569430 PE=4 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 3.7e-114
Identity = 211/242 (87.19%), Postives = 228/242 (94.21%), Query Frame = 1


Query: 1   MADSNPSSQHQEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV 60
           MADS+ SSQ Q+M  RA++  LKYLEFVQTAAFRATECFFNVYGYAK+R GPL+PGVETV
Sbjct: 1   MADSDLSSQRQDMPVRADQGSLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV 60

Query: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAP 120
           EGTVKSVV PLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPT+KQASSQAM AAQQAP
Sbjct: 61  EGTVKSVVAPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMFAAQQAP 120

Query: 121 EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 180
           E+AR+VA EVR  GLKDSVSGIVKSVYAKYEP+AKQLYSKYEPKAEQCAASAWH+LNQLP
Sbjct: 121 EVARSVASEVRRAGLKDSVSGIVKSVYAKYEPSAKQLYSKYEPKAEQCAASAWHKLNQLP 180

Query: 181 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 240
           VFPTVAQAILPTA YCTEKYNETV++++KKGYKVSSYLPLVPTERIAKVFSK+ +EMEPL
Sbjct: 181 VFPTVAQAILPTAAYCTEKYNETVRTSAKKGYKVSSYLPLVPTERIAKVFSKNGVEMEPL 240

Query: 241 VN 243
           VN
Sbjct: 241 VN 242

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BLAST of Cp4.1LG04g00510.1 vs. TrEMBL
Match: A0A0B0Q0B4_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_12676 PE=4 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 1.2e-85
Identity = 159/236 (67.37%), Postives = 193/236 (81.78%), Query Frame = 1


Query: 7   SSQHQEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETVEGTVKS 66
           S+  Q+MA   EE+RLKYLEFVQ AA  A  CF N+Y YAK R GPL+P VETVEGTVK 
Sbjct: 6   SNFQQDMAKEEEEQRLKYLEFVQVAAVHAALCFTNLYLYAKERSGPLKPSVETVEGTVKC 65

Query: 67  VVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAPEIARNV 126
           VVGP+Y+K+H VP+E LKFVD KV ESVTK+DR VPP IKQ S++A+SAAQ+APE+AR V
Sbjct: 66  VVGPVYDKYHDVPVEFLKFVDSKVGESVTKLDRRVPPVIKQVSTEAISAAQKAPEVARGV 125

Query: 127 ALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLPVFPTVA 186
           A EV   G+ ++ SG+ KSVY KYEPTAKQLY+KYEPKAEQCA SAW +LN+LP+FP VA
Sbjct: 126 ASEVHRAGVVNTASGLAKSVYTKYEPTAKQLYAKYEPKAEQCAVSAWRKLNKLPLFPQVA 185

Query: 187 QAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPLVN 243
             ++PTA YC++KYNETV S+++KGYKV+SYLPLVPTE+IAKVF +   EMEPLV+
Sbjct: 186 SVVVPTAAYCSDKYNETVVSSAEKGYKVASYLPLVPTEKIAKVFGEQTTEMEPLVS 241

[Close]

BLAST of Cp4.1LG04g00510.1 vs. TrEMBL
Match: A0A0D2PGY1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G300000 PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 3.6e-85
Identity = 157/236 (66.53%), Postives = 193/236 (81.78%), Query Frame = 1


Query: 7   SSQHQEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETVEGTVKS 66
           S+  Q+MA   EE+RLKYLEFVQ AA  A  CF N+Y YAK R+GPL+P VETVEGTVKS
Sbjct: 6   SNFQQDMAKEEEEQRLKYLEFVQVAAVHAALCFTNLYLYAKERLGPLKPSVETVEGTVKS 65

Query: 67  VVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAPEIARNV 126
           VVGP+Y+K+H VP+E LKFVD KV ESVTK+DR VPP IKQ S++A+ AAQ+APE+AR V
Sbjct: 66  VVGPVYDKYHDVPVEFLKFVDSKVGESVTKLDRQVPPVIKQVSTEAILAAQKAPEVARGV 125

Query: 127 ALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLPVFPTVA 186
           A EV   G+ ++ SG+ KSVY KYEPTAK+LY+KYEPKAEQCA SAW +LN LP+FP VA
Sbjct: 126 ASEVHRAGVVNTASGLAKSVYTKYEPTAKELYAKYEPKAEQCAVSAWRKLNMLPLFPQVA 185

Query: 187 QAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPLVN 243
             ++PTA YC++KYNETV S+++KGYKV+SYLPLVPTE+IAKVF +   EM+PLV+
Sbjct: 186 SVVVPTAAYCSDKYNETVVSSAEKGYKVASYLPLVPTEKIAKVFGEQTTEMQPLVS 241

[Close]

BLAST of Cp4.1LG04g00510.1 vs. TrEMBL
Match: B9RFA8_RICCO (Rubber elongation factor protein, putative OS=Ricinus communis GN=RCOM_1433280 PE=4 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 1.2e-83
Identity = 159/242 (65.70%), Postives = 195/242 (80.58%), Query Frame = 1


Query: 1   MADSNPSSQHQEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV 60
           MA+ N + Q Q   A+  EERLKYLEFVQ AA  A   F N+Y YAK++ GPL+PGVETV
Sbjct: 1   MAEQNVNLQQQ--MAKENEERLKYLEFVQVAALHAVMTFANLYVYAKDKAGPLKPGVETV 60

Query: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAP 120
           EGTVKSVVGP+Y+KFH VPIEVLKFVDRKVDESVTK+DR VPP +KQ S+QA S A++AP
Sbjct: 61  EGTVKSVVGPVYDKFHDVPIEVLKFVDRKVDESVTKLDRRVPPVVKQVSAQAYSVAREAP 120

Query: 121 EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 180
             AR VA EV+ TG+K++ SG+ K++YA YEP AK+LYSKYEPKAEQCA SAW +LNQLP
Sbjct: 121 VAARAVASEVQRTGVKETASGLAKTLYAMYEPKAKELYSKYEPKAEQCAVSAWRKLNQLP 180

Query: 181 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 240
           +FP VAQ  +PTA YC+EKYN+TV ST++KGY+VSSYLPLVPT++IA+VF  +  E  P+
Sbjct: 181 LFPQVAQVFVPTAAYCSEKYNQTVVSTAEKGYRVSSYLPLVPTQKIAQVFRNEVPESAPI 240

Query: 241 VN 243
            +
Sbjct: 241 AS 240

[Close]

BLAST of Cp4.1LG04g00510.1 vs. TrEMBL
Match: V4V442_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10003772mg PE=4 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 9.8e-83
Identity = 151/225 (67.11%), Postives = 185/225 (82.22%), Query Frame = 1


Query: 18  EEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETVEGTVKSVVGPLYNKFHG 77
           EE+RLKYLEFVQ A      CF N+YGYAK + GPL+PGVE+VEGTVK+VVGP+Y+K+HG
Sbjct: 81  EEQRLKYLEFVQVATIHVLLCFHNLYGYAKAKSGPLKPGVESVEGTVKNVVGPVYDKYHG 140

Query: 78  VPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAPEIARNVALEVRHTGLKD 137
           +PIE+LKF+DRKVDESVTK+D  VPP +KQ  +QA+SAAQ AP +AR+VA EV+  G+  
Sbjct: 141 LPIELLKFIDRKVDESVTKLDCRVPPVLKQVPAQALSAAQMAPVVARSVASEVKTAGVAG 200

Query: 138 SVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLPVFPTVAQAILPTAVYCT 197
           + SG+ KSVY KYEP AK+LYSKYEPKAEQ A SAW +LNQ+P+FP VAQ ++PTA YC+
Sbjct: 201 TASGMAKSVYTKYEPAAKELYSKYEPKAEQYAVSAWRKLNQMPLFPQVAQVVVPTAAYCS 260

Query: 198 EKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPLVN 243
           EKYN+TV S + KGYKVSSYLPLVPTERIAKVFS   +E +PL +
Sbjct: 261 EKYNQTVVSAADKGYKVSSYLPLVPTERIAKVFSNGVVESQPLAS 305

[Close]

BLAST of Cp4.1LG04g00510.1 vs. TAIR10
Match: AT3G05500.1 (AT3G05500.1 Rubber elongation factor protein (REF))

HSP 1 Score: 289.7 bits (740), Expect = 1.7e-78
Identity = 140/240 (58.33%), Postives = 189/240 (78.75%), Query Frame = 1


Query: 1   MADSNPSSQHQEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV 60
           MA     +Q +    + E+ERLKYL+FVQ AA  A   F  +Y  AK++ GPL+PGVE+V
Sbjct: 1   MATQTDLAQPKLDMTKEEKERLKYLQFVQAAAVEALLRFALIYAKAKDKSGPLKPGVESV 60

Query: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAP 120
           EG VK+VVGP+Y K+H VP+EVLK++D+KVD SVT++DR VPP +KQ S+QA+SAAQ AP
Sbjct: 61  EGAVKTVVGPVYEKYHDVPVEVLKYMDQKVDMSVTELDRRVPPVVKQVSAQAISAAQIAP 120

Query: 121 EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 180
            +AR +A EVR  G+ ++ SG+ KSVY+KYEP AK+LY+ YEPKAEQCA SAW +LNQLP
Sbjct: 121 IVARALASEVRRAGVVETASGMAKSVYSKYEPAAKELYANYEPKAEQCAVSAWKKLNQLP 180

Query: 181 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 240
           +FP +AQ  +PTA +C+EKYN+TV   ++KGY+V+SY+PLVPTERI+K+F++++ E EPL
Sbjct: 181 LFPRLAQVAVPTAAFCSEKYNDTVVKAAEKGYRVTSYMPLVPTERISKIFAEEKAETEPL 240

[Close]

BLAST of Cp4.1LG04g00510.1 vs. TAIR10
Match: AT2G47780.1 (AT2G47780.1 Rubber elongation factor protein (REF))

HSP 1 Score: 177.2 bits (448), Expect = 1.2e-44
Identity = 93/217 (42.86%), Postives = 133/217 (61.29%), Query Frame = 1


Query: 18  EEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETVEGTVKSVVGPLYNKFHG 77
           +E +LK+LEF+Q AA     CF  +Y  AK+  GPL+ GVE +E  V++V+ PLY KFH 
Sbjct: 37  DEMKLKHLEFIQVAAVYFAACFSTLYELAKDNAGPLKLGVENIEDCVRTVLAPLYEKFHD 96

Query: 78  VPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAPEIARNVALEVRHTGLKD 137
           VP ++L FVDRKVD+    ++ +VP  +KQASSQA++           VA EV+ TG+ D
Sbjct: 97  VPFKLLLFVDRKVDDVFFDVETYVPSLVKQASSQALT-----------VATEVQRTGVVD 156

Query: 138 SVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLPVFPTVAQAILPTAVYCT 197
           +   I +SV             KYEP AE  AA+ W  LNQLP+FP VA  ++PTA Y +
Sbjct: 157 TTKSIARSV-----------RDKYEPAAEYYAATLWRLLNQLPLFPEVAHLVIPTAFYWS 216

Query: 198 EKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDR 235
           EKYN+ V+    + Y  + YLP++P E+I+ +  +D+
Sbjct: 217 EKYNDAVRYVGDRDYFGAEYLPMIPIEKISDILEQDQ 231

[Close]

BLAST of Cp4.1LG04g00510.1 vs. TAIR10
Match: AT1G67360.2 (AT1G67360.2 Rubber elongation factor protein (REF))

HSP 1 Score: 118.2 bits (295), Expect = 6.8e-27
Identity = 75/217 (34.56%), Postives = 105/217 (48.39%), Query Frame = 1


Query: 17  AEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETVEGTVKSVVGPLYNKFH 76
           ++E  LK+L FV+ A         N+Y YAK   GPL+  VE VEG V +VV P+Y KF 
Sbjct: 8   SKEVALKHLAFVRIATIHILASVSNLYEYAKQNSGPLKSAVEKVEGAVTTVVTPVYQKFK 67

Query: 77  GVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAPEIARNVALEVRHTGLK 136
            VP  +L F+D KV E   K D H PP  K+  +QA     +A E A++   E R  G K
Sbjct: 68  DVPDSLLVFLDHKVGEVSYKFDEHAPPMAKKVVNQAHVLIYKATEKAQSFVKEARTGGPK 127

Query: 137 DSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLPVFPTVAQAILPTAVYC 196
            + +      YA  E         Y+      +   W +LNQ      +    LP A + 
Sbjct: 128 AAFN------YAATE---------YKFFVVTNSVKVWAKLNQYKPIHAMGDKALPVAAHF 187

Query: 197 TEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKD 234
           + +YN+ V   +  GY +  YLPLVP + I K + K+
Sbjct: 188 SSRYNDLVTDMTNMGYSLVGYLPLVPVDDIVKAYEKE 209

[Close]

BLAST of Cp4.1LG04g00510.1 vs. NCBI nr
Match: gi|659099505|ref|XP_008450634.1| (PREDICTED: REF/SRPP-like protein At3g05500 [Cucumis melo])

HSP 1 Score: 427.9 bits (1099), Expect = 1.1e-116
Identity = 215/242 (88.84%), Postives = 232/242 (95.87%), Query Frame = 1


Query: 1   MADSNPSSQHQEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV 60
           MADS+ SSQ Q+MA RA+E+RLKYLEFVQTAAFRATECFFNVYGYAK+R GPL+PGVETV
Sbjct: 1   MADSDHSSQRQDMAVRADEDRLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV 60

Query: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAP 120
           EGTVKSVVGPL NKFHGVPIEVLKFVDRKVDESVTKIDRHVPPT+K ASSQAMSAAQQAP
Sbjct: 61  EGTVKSVVGPLCNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKHASSQAMSAAQQAP 120

Query: 121 EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 180
           E+ARNVA EVR +GLKDSVSGIVKSVYAKYEP+AKQLYSKYEPKAEQCAASAWH+LNQLP
Sbjct: 121 EVARNVASEVRRSGLKDSVSGIVKSVYAKYEPSAKQLYSKYEPKAEQCAASAWHKLNQLP 180

Query: 181 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 240
           VFPTVAQAILPTA YCTEKYNETV++++KKGYKVSSYLPLVPTERIAKVFSK+ +EMEPL
Sbjct: 181 VFPTVAQAILPTAAYCTEKYNETVRTSAKKGYKVSSYLPLVPTERIAKVFSKNGVEMEPL 240

Query: 241 VN 243
           VN
Sbjct: 241 VN 242

[Close]

BLAST of Cp4.1LG04g00510.1 vs. NCBI nr
Match: gi|449435657|ref|XP_004135611.1| (PREDICTED: REF/SRPP-like protein At3g05500 [Cucumis sativus])

HSP 1 Score: 419.1 bits (1076), Expect = 5.3e-114
Identity = 211/242 (87.19%), Postives = 228/242 (94.21%), Query Frame = 1


Query: 1   MADSNPSSQHQEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV 60
           MADS+ SSQ Q+M  RA++  LKYLEFVQTAAFRATECFFNVYGYAK+R GPL+PGVETV
Sbjct: 1   MADSDLSSQRQDMPVRADQGSLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV 60

Query: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAP 120
           EGTVKSVV PLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPT+KQASSQAM AAQQAP
Sbjct: 61  EGTVKSVVAPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMFAAQQAP 120

Query: 121 EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 180
           E+AR+VA EVR  GLKDSVSGIVKSVYAKYEP+AKQLYSKYEPKAEQCAASAWH+LNQLP
Sbjct: 121 EVARSVASEVRRAGLKDSVSGIVKSVYAKYEPSAKQLYSKYEPKAEQCAASAWHKLNQLP 180

Query: 181 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 240
           VFPTVAQAILPTA YCTEKYNETV++++KKGYKVSSYLPLVPTERIAKVFSK+ +EMEPL
Sbjct: 181 VFPTVAQAILPTAAYCTEKYNETVRTSAKKGYKVSSYLPLVPTERIAKVFSKNGVEMEPL 240

Query: 241 VN 243
           VN
Sbjct: 241 VN 242

[Close]

BLAST of Cp4.1LG04g00510.1 vs. NCBI nr
Match: gi|728850786|gb|KHG30229.1| (hypothetical protein F383_12676 [Gossypium arboreum])

HSP 1 Score: 324.3 bits (830), Expect = 1.8e-85
Identity = 159/236 (67.37%), Postives = 193/236 (81.78%), Query Frame = 1


Query: 7   SSQHQEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETVEGTVKS 66
           S+  Q+MA   EE+RLKYLEFVQ AA  A  CF N+Y YAK R GPL+P VETVEGTVK 
Sbjct: 6   SNFQQDMAKEEEEQRLKYLEFVQVAAVHAALCFTNLYLYAKERSGPLKPSVETVEGTVKC 65

Query: 67  VVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAPEIARNV 126
           VVGP+Y+K+H VP+E LKFVD KV ESVTK+DR VPP IKQ S++A+SAAQ+APE+AR V
Sbjct: 66  VVGPVYDKYHDVPVEFLKFVDSKVGESVTKLDRRVPPVIKQVSTEAISAAQKAPEVARGV 125

Query: 127 ALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLPVFPTVA 186
           A EV   G+ ++ SG+ KSVY KYEPTAKQLY+KYEPKAEQCA SAW +LN+LP+FP VA
Sbjct: 126 ASEVHRAGVVNTASGLAKSVYTKYEPTAKQLYAKYEPKAEQCAVSAWRKLNKLPLFPQVA 185

Query: 187 QAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPLVN 243
             ++PTA YC++KYNETV S+++KGYKV+SYLPLVPTE+IAKVF +   EMEPLV+
Sbjct: 186 SVVVPTAAYCSDKYNETVVSSAEKGYKVASYLPLVPTEKIAKVFGEQTTEMEPLVS 241

[Close]

BLAST of Cp4.1LG04g00510.1 vs. NCBI nr
Match: gi|823197092|ref|XP_012434168.1| (PREDICTED: REF/SRPP-like protein At3g05500 [Gossypium raimondii])

HSP 1 Score: 322.8 bits (826), Expect = 5.2e-85
Identity = 157/236 (66.53%), Postives = 193/236 (81.78%), Query Frame = 1


Query: 7   SSQHQEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETVEGTVKS 66
           S+  Q+MA   EE+RLKYLEFVQ AA  A  CF N+Y YAK R+GPL+P VETVEGTVKS
Sbjct: 6   SNFQQDMAKEEEEQRLKYLEFVQVAAVHAALCFTNLYLYAKERLGPLKPSVETVEGTVKS 65

Query: 67  VVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAPEIARNV 126
           VVGP+Y+K+H VP+E LKFVD KV ESVTK+DR VPP IKQ S++A+ AAQ+APE+AR V
Sbjct: 66  VVGPVYDKYHDVPVEFLKFVDSKVGESVTKLDRQVPPVIKQVSTEAILAAQKAPEVARGV 125

Query: 127 ALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLPVFPTVA 186
           A EV   G+ ++ SG+ KSVY KYEPTAK+LY+KYEPKAEQCA SAW +LN LP+FP VA
Sbjct: 126 ASEVHRAGVVNTASGLAKSVYTKYEPTAKELYAKYEPKAEQCAVSAWRKLNMLPLFPQVA 185

Query: 187 QAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPLVN 243
             ++PTA YC++KYNETV S+++KGYKV+SYLPLVPTE+IAKVF +   EM+PLV+
Sbjct: 186 SVVVPTAAYCSDKYNETVVSSAEKGYKVASYLPLVPTEKIAKVFGEQTTEMQPLVS 241

[Close]

BLAST of Cp4.1LG04g00510.1 vs. NCBI nr
Match: gi|255542728|ref|XP_002512427.1| (PREDICTED: REF/SRPP-like protein At3g05500 [Ricinus communis])

HSP 1 Score: 317.8 bits (813), Expect = 1.7e-83
Identity = 159/242 (65.70%), Postives = 195/242 (80.58%), Query Frame = 1


Query: 1   MADSNPSSQHQEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV 60
           MA+ N + Q Q   A+  EERLKYLEFVQ AA  A   F N+Y YAK++ GPL+PGVETV
Sbjct: 1   MAEQNVNLQQQ--MAKENEERLKYLEFVQVAALHAVMTFANLYVYAKDKAGPLKPGVETV 60

Query: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAP 120
           EGTVKSVVGP+Y+KFH VPIEVLKFVDRKVDESVTK+DR VPP +KQ S+QA S A++AP
Sbjct: 61  EGTVKSVVGPVYDKFHDVPIEVLKFVDRKVDESVTKLDRRVPPVVKQVSAQAYSVAREAP 120

Query: 121 EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 180
             AR VA EV+ TG+K++ SG+ K++YA YEP AK+LYSKYEPKAEQCA SAW +LNQLP
Sbjct: 121 VAARAVASEVQRTGVKETASGLAKTLYAMYEPKAKELYSKYEPKAEQCAVSAWRKLNQLP 180

Query: 181 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 240
           +FP VAQ  +PTA YC+EKYN+TV ST++KGY+VSSYLPLVPT++IA+VF  +  E  P+
Sbjct: 181 LFPQVAQVFVPTAAYCSEKYNQTVVSTAEKGYRVSSYLPLVPTQKIAQVFRNEVPESAPI 240

Query: 241 VN 243
            +
Sbjct: 241 AS 240

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g00510.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y3550_ARATH	3.0e-77	58.33	REF/SRPP-like protein At3g05500 OS=Arabidopsis thaliana GN=At3g05500 PE=1 SV=1	[more]
SRP_VITRI	6.8e-69	56.96	Stress-related protein OS=Vitis riparia GN=SRP PE=2 SV=1	[more]
Y5513_ORYSI	7.0e-58	52.51	REF/SRPP-like protein OsI_017815 OS=Oryza sativa subsp. indica GN=OsI_017815 PE=...	[more]
Y5513_ORYSJ	7.0e-58	52.51	REF/SRPP-like protein Os05g0151300/LOC_Os05g05940 OS=Oryza sativa subsp. japonic...	[more]
SRPP_HEVBR	7.5e-52	49.77	Small rubber particle protein OS=Hevea brasiliensis GN=SRPP PE=1 SV=1	[more]

BLAST of Cp4.1LG04g00510.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M1J0_CUCSA	3.7e-114	87.19	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G569430 PE=4 SV=1	[more]
A0A0B0Q0B4_GOSAR	1.2e-85	67.37	Uncharacterized protein OS=Gossypium arboreum GN=F383_12676 PE=4 SV=1	[more]
A0A0D2PGY1_GOSRA	3.6e-85	66.53	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G300000 PE=4 SV=1	[more]
B9RFA8_RICCO	1.2e-83	65.70	Rubber elongation factor protein, putative OS=Ricinus communis GN=RCOM_1433280 P...	[more]
V4V442_9ROSI	9.8e-83	67.11	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10003772mg PE=4 SV=1	[more]

BLAST of Cp4.1LG04g00510.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G05500.1	1.7e-78	58.33	Rubber elongation factor protein (REF)	[more]
AT2G47780.1	1.2e-44	42.86	Rubber elongation factor protein (REF)	[more]
AT1G67360.2	6.8e-27	34.56	Rubber elongation factor protein (REF)	[more]

BLAST of Cp4.1LG04g00510.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659099505\|ref\|XP_008450634.1\|	1.1e-116	88.84	PREDICTED: REF/SRPP-like protein At3g05500 [Cucumis melo]	[more]
gi\|449435657\|ref\|XP_004135611.1\|	5.3e-114	87.19	PREDICTED: REF/SRPP-like protein At3g05500 [Cucumis sativus]	[more]
gi\|728850786\|gb\|KHG30229.1\|	1.8e-85	67.37	hypothetical protein F383_12676 [Gossypium arboreum]	[more]
gi\|823197092\|ref\|XP_012434168.1\|	5.2e-85	66.53	PREDICTED: REF/SRPP-like protein At3g05500 [Gossypium raimondii]	[more]
gi\|255542728\|ref\|XP_002512427.1\|	1.7e-83	65.70	PREDICTED: REF/SRPP-like protein At3g05500 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR008802	REF

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051179	localization
cellular_component	GO:0043229	intracellular organelle
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG04g00510	Cp4.1LG04g00510	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG04g00510.1:five_prime_utr:001	Cp4.1LG04g00510.1:five_prime_utr:001	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG04g00510.1:cds:003	Cp4.1LG04g00510.1:cds:003	CDS
Cp4.1LG04g00510.1:cds:002	Cp4.1LG04g00510.1:cds:002	CDS
Cp4.1LG04g00510.1:cds:001	Cp4.1LG04g00510.1:cds:001	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG04g00510.1:three_prime_utr:001	Cp4.1LG04g00510.1:three_prime_utr:001	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG04g00510.1	Cp4.1LG04g00510.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008802	Rubber elongation factor	PFAM	PF05755	REF	coord: 17..231 score: 5.6
None	No IPR available	PANTHER	PTHR33732	FAMILY NOT NAMED	coord: 1..240 score: 8.6E
None	No IPR available	PANTHER	PTHR33732:SF3	SUBFAMILY NOT NAMED	coord: 1..240 score: 8.6E