Cp4.1LG03g15240.1 (mRNA) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG03g15240.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Protease inhibitor/seed storage/lipid transfer family protein
Location	Cp4.1LG03 : 7952404 .. 7952688 (-)
Sequence length	285

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAAAAGGCTTTGCCTTTTGGTGGCAGTGATGGCGATGGTGGTGCTGCTCACTGGAGCTGGAGTGGCAGAGGCGGTGAAATGCGATCCGATGGAGATGAGAGCATGTCTTCCTGCAATCAAATCCTCAGTGCCGCCGACAGCGGAATGCTGTGATAAAGTGAAGAAGCAAGAGGGATGCCTTTGTGAATACCTGAAAAGCCCAATATTGAAGCCTTACTTAGAGTCTCCCAATGCTAAAAAGATAGGTTCTTCCTGTGGCATTCCCATCCCCACCTGCTAG

mRNA sequence

ATGAAGAAAAGGCTTTGCCTTTTGGTGGCAGTGATGGCGATGGTGGTGCTGCTCACTGGAGCTGGAGTGGCAGAGGCGGTGAAATGCGATCCGATGGAGATGAGAGCATGTCTTCCTGCAATCAAATCCTCAGTGCCGCCGACAGCGGAATGCTGTGATAAAGTGAAGAAGCAAGAGGGATGCCTTTGTGAATACCTGAAAAGCCCAATATTGAAGCCTTACTTAGAGTCTCCCAATGCTAAAAAGATAGGTTCTTCCTGTGGCATTCCCATCCCCACCTGCTAG

Coding sequence (CDS)

ATGAAGAAAAGGCTTTGCCTTTTGGTGGCAGTGATGGCGATGGTGGTGCTGCTCACTGGAGCTGGAGTGGCAGAGGCGGTGAAATGCGATCCGATGGAGATGAGAGCATGTCTTCCTGCAATCAAATCCTCAGTGCCGCCGACAGCGGAATGCTGTGATAAAGTGAAGAAGCAAGAGGGATGCCTTTGTGAATACCTGAAAAGCCCAATATTGAAGCCTTACTTAGAGTCTCCCAATGCTAAAAAGATAGGTTCTTCCTGTGGCATTCCCATCCCCACCTGCTAG

Protein sequence

MKKRLCLLVAVMAMVVLLTGAGVAEAVKCDPMEMRACLPAIKSSVPPTAECCDKVKKQEGCLCEYLKSPILKPYLESPNAKKIGSSCGIPIPTC

Homology

[Close]

BLAST of Cp4.1LG03g15240.1 vs. Swiss-Prot
Match: NLTP_VIGUN (Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata PE=2 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 7.3e-19
Identity = 44/95 (46.32%), Postives = 64/95 (67.37%), Query Frame = 1


Query: 1  MKKRLCLLVAVMAMVVLLTGAG-VAEAVKCDPMEMRACLPAIKSSVPPTAECCDKVKKQE 60
          MK ++ ++ AV+ + + L   G VAEAV C+P E+ +C+PAI     P++ CC K+K QE
Sbjct: 5  MKMKMSVVCAVVVVALFLIDVGPVAEAVTCNPTELSSCVPAITGGSKPSSTCCSKLKVQE 64

Query: 61 GCLCEYLKSPILKPYLESPNAKKIGSSCGIPIPTC 95
           CLC Y+K+P LK Y+ SP AKK+ S+CG+  P C
Sbjct: 65 PCLCNYIKNPSLKQYVNSPGAKKVLSNCGVTYPNC 99

[Close]

BLAST of Cp4.1LG03g15240.1 vs. Swiss-Prot
Match: NLTP2_PRUAR (Non-specific lipid-transfer protein 2 OS=Prunus armeniaca PE=1 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 9.9e-16
Identity = 32/68 (47.06%), Postives = 46/68 (67.65%), Query Frame = 1


Query: 27 VKCDPMEMRACLPAIKSSVPPTAECCDKVKKQEGCLCEYLKSPILKPYLESPNAKKIGSS 86
          V C P+++  CL  I S  P    CC K+++Q  CLC YLK+P L+ Y+ SPNA+K+ S+
Sbjct: 1  VTCSPVQLSPCLGPINSGAPSPTTCCQKLREQRPCLCGYLKNPSLRQYVNSPNARKLASN 60

Query: 87 CGIPIPTC 95
          CG+P+P C
Sbjct: 61 CGVPVPQC 68

[Close]

BLAST of Cp4.1LG03g15240.1 vs. Swiss-Prot
Match: NLTP2_HORVU (Probable non-specific lipid-transfer protein OS=Hordeum vulgare GN=LTP2 PE=2 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 4.1e-14
Identity = 34/94 (36.17%), Postives = 53/94 (56.38%), Query Frame = 1


Query: 1   MKKRLCLLVAVMAMVVLLTGAGVAEAVKCDPMEMRACLPAIKSSVPPTAECCDKVKKQEG 60
           M+K   + V ++ +V L  GA       C+P ++  C  AI     P+ ECC  ++ Q+G
Sbjct: 9   MRKEAAVAVMMVMVVTLAAGADAGAGAACEPAQLAVCASAILGGTKPSGECCGNLRAQQG 68

Query: 61  CLCEYLKSPILKPYLESPNAKKIGSSCGIPIPTC 95
           CLC+Y+K P    Y+ SP+A+   + CGIP+P C
Sbjct: 69  CLCQYVKDPNYGHYVSSPHARDTLNLCGIPVPHC 102

[Close]

BLAST of Cp4.1LG03g15240.1 vs. Swiss-Prot
Match: NLTPX_ORYSI (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica GN=LTP-2 PE=3 SV=2)

HSP 1 Score: 78.6 bits (192), Expect = 4.1e-14
Identity = 40/95 (42.11%), Postives = 54/95 (56.84%), Query Frame = 1


Query: 1  MKKRLCLLVAVMAMVVLLTGAGVAEA-VKCDPMEMRACLPAIKSSVPPTAECCDKVKKQE 60
          M +RL +LV  +AMV    G  V  A   C+  ++  C  AI     PTA CC  ++ Q+
Sbjct: 1  MMRRLAVLVLAVAMVAACGGGVVGVAGASCNAGQLTVCAGAIAGGARPTAACCSSLRAQQ 60

Query: 61 GCLCEYLKSPILKPYLESPNAKKIGSSCGIPIPTC 95
          GC C++ K P    Y+ SPNA+K  SSCGI +PTC
Sbjct: 61 GCFCQFAKDPRYGRYVNSPNARKAVSSCGIALPTC 95

[Close]

BLAST of Cp4.1LG03g15240.1 vs. Swiss-Prot
Match: NLTP2_APIGA (Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.6e-13
Identity = 31/63 (49.21%), Postives = 44/63 (69.84%), Query Frame = 1


Query: 29 CDPMEMRACLPAIKSSVPPTAECCDKVKKQEGCLCEYLKSPILKPYLESPNAKKIGSSCG 88
          C  +++  CL AI  + PP+A CC+K+K+Q+ CLC YLK P LK Y+ SP A+K  SSCG
Sbjct: 3  CSAVQLSPCLAAITKNTPPSAACCNKLKEQKPCLCGYLKDPNLKNYVNSPGARKTASSCG 62

Query: 89 IPI 92
          + +
Sbjct: 63 VAL 65

[Close]

BLAST of Cp4.1LG03g15240.1 vs. TrEMBL
Match: A0A0A0KW09_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G141230 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 5.8e-31
Identity = 67/93 (72.04%), Postives = 80/93 (86.02%), Query Frame = 1


Query: 5   LCLLVAVMAMVV---LLTGAGVAEAVKCDPMEMRACLPAIKSSVPPTAECCDKVKKQEGC 64
           LCL V VMAMV+   L+TGAG+A+AV C+PMEMR CLPA++SSVPPTAECC+K+K+QE C
Sbjct: 10  LCLSVPVMAMVMVVALITGAGLADAVNCNPMEMRPCLPALESSVPPTAECCEKLKEQEPC 69

Query: 65  LCEYLKSPILKPYLESPNAKKIGSSCGIPIPTC 95
            C YLKSP+ KPYLESPNAKKI +SC +PIPTC
Sbjct: 70  FCAYLKSPVFKPYLESPNAKKIATSCRVPIPTC 102

[Close]

BLAST of Cp4.1LG03g15240.1 vs. TrEMBL
Match: B9H330_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s09510g PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 7.8e-20
Identity = 46/92 (50.00%), Postives = 67/92 (72.83%), Query Frame = 1


Query: 3  KRLCLLVAVMAMVVLLTGAGVAEAVKCDPMEMRACLPAIKSSVPPTAECCDKVKKQEGCL 62
          K+  LLV ++ +V+LL  A V++AV C+P ++  CLPAI SS PP+  CC K+K+Q+ CL
Sbjct: 2  KKASLLVTMVVVVMLLAEAKVSQAVTCNPAQLSPCLPAISSSSPPSTTCCSKLKEQKPCL 61

Query: 63 CEYLKSPILKPYLESPNAKKIGSSCGIPIPTC 95
          C YLK P LK ++ SP A+K+ S+CG+P P+C
Sbjct: 62 CGYLKDPALKQFVSSPGARKVASACGVPYPSC 93

[Close]

BLAST of Cp4.1LG03g15240.1 vs. TrEMBL
Match: A0A0B2QIV0_GLYSO (Putative non-specific lipid-transfer protein AKCS9 OS=Glycine soja GN=glysoja_037194 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 1.7e-19
Identity = 47/95 (49.47%), Postives = 67/95 (70.53%), Query Frame = 1


Query: 1  MKKRLC-LLVAVMAMVVLLTGAGVAEAVKCDPMEMRACLPAIKSSVPPTAECCDKVKKQE 60
          M K++C   + VMA + L+  + +AEAV C P+E+  CL AI SS PP+  CC KV++Q 
Sbjct: 3  MMKKVCGFAIVVMAALFLVEMSPMAEAVTCSPVELSPCLGAITSSSPPSTTCCQKVREQR 62

Query: 61 GCLCEYLKSPILKPYLESPNAKKIGSSCGIPIPTC 95
           CLC YLK+P L+PY+ SP ++++ SSCG+P PTC
Sbjct: 63 PCLCGYLKNPSLRPYVNSPGSRRVASSCGVPFPTC 97

[Close]

BLAST of Cp4.1LG03g15240.1 vs. TrEMBL
Match: I1N5L5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_19G002300 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 1.7e-19
Identity = 47/95 (49.47%), Postives = 67/95 (70.53%), Query Frame = 1


Query: 1  MKKRLC-LLVAVMAMVVLLTGAGVAEAVKCDPMEMRACLPAIKSSVPPTAECCDKVKKQE 60
          M K++C   + VMA + L+  + +AEAV C P+E+  CL AI SS PP+  CC KV++Q 
Sbjct: 3  MMKKVCGFAIVVMAALFLVEMSPMAEAVTCSPVELSPCLGAITSSSPPSTTCCQKVREQR 62

Query: 61 GCLCEYLKSPILKPYLESPNAKKIGSSCGIPIPTC 95
           CLC YLK+P L+PY+ SP ++++ SSCG+P PTC
Sbjct: 63 PCLCGYLKNPSLRPYVNSPGSRRVASSCGVPFPTC 97

[Close]

BLAST of Cp4.1LG03g15240.1 vs. TrEMBL
Match: A5JUZ7_SESIN (Lipid transfer protein OS=Sesamum indicum GN=LTP1 PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 5.1e-19
Identity = 48/96 (50.00%), Postives = 68/96 (70.83%), Query Frame = 1


Query: 1  MKKRLCLLVAVMAMVVLLTGAGVAE--AVKCDPMEMRACLPAIKSSVPPTAECCDKVKKQ 60
          MKK    +  V+A+VV+L  A V E  A  C+P+E+  CL AI  S PP+AECC K+K+Q
Sbjct: 1  MKKGAAAVWWVVAIVVVLAVAEVHETGAAPCNPVELSPCLAAISGSQPPSAECCSKLKEQ 60

Query: 61 EGCLCEYLKSPILKPYLESPNAKKIGSSCGIPIPTC 95
            C C+Y+K+P+ KPY++SPNAKK+ ++CG+  PTC
Sbjct: 61 VPCFCDYVKNPVFKPYVDSPNAKKVAATCGVAFPTC 96

[Close]

BLAST of Cp4.1LG03g15240.1 vs. TAIR10
Match: AT1G48750.1 (AT1G48750.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 92.0 bits (227), Expect = 2.0e-19
Identity = 41/94 (43.62%), Postives = 63/94 (67.02%), Query Frame = 1


Query: 1  MKKRLCLLVAVMAMVVLLTGAGVAEAVKCDPMEMRACLPAIKSSVPPTAECCDKVKKQEG 60
          M K + + V  +A  +LL    VAE V C PM++ +C  A+ SS PP+  CC K+++Q+ 
Sbjct: 1  MVKVMWVSVLALAAAILLLTVPVAEGVTCSPMQLASCAAAMTSSSPPSEACCTKLREQQP 60

Query: 61 CLCEYLKSPILKPYLESPNAKKIGSSCGIPIPTC 95
          CLC Y+++P L+ Y+ SPNA+K+ +SC IP P+C
Sbjct: 61 CLCGYMRNPTLRQYVSSPNARKVSNSCKIPSPSC 94

[Close]

BLAST of Cp4.1LG03g15240.1 vs. TAIR10
Match: AT3G18280.1 (AT3G18280.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 89.4 bits (220), Expect = 1.3e-18
Identity = 42/94 (44.68%), Postives = 62/94 (65.96%), Query Frame = 1


Query: 1  MKKRLCLLVAVMAMVVLLTGAGVAEAVKCDPMEMRACLPAIKSSVPPTAECCDKVKKQEG 60
          M K   + +  +A V+L+  A  AEAV C PM++  C  AI SS PP+A CC K+K+Q  
Sbjct: 3  MIKTTMVSLFALAAVLLMILAPAAEAVTCSPMQLSPCATAITSSSPPSALCCAKLKEQRP 62

Query: 61 CLCEYLKSPILKPYLESPNAKKIGSSCGIPIPTC 95
          CLC Y+++P L+ ++ +PNA+K+  SC +PIP C
Sbjct: 63 CLCGYMRNPSLRRFVSTPNARKVSKSCKLPIPRC 96

[Close]

BLAST of Cp4.1LG03g15240.1 vs. TAIR10
Match: AT5G38160.1 (AT5G38160.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 77.0 bits (188), Expect = 6.8e-15
Identity = 34/86 (39.53%), Postives = 54/86 (62.79%), Query Frame = 1


Query: 9   VAVMAMVVLLTGAGVAEAVKCDPMEMRACLPAIKSSVPPTAECCDKVKKQEGCLCEYLKS 68
           V V A VV   G+G    V CD  ++ +C+ A+ +  PP+ +CC K+K+ E CLC Y+++
Sbjct: 20  VPVKARVV--KGSGEEVNVTCDATQLSSCVTAVSTGAPPSTDCCGKLKEHETCLCTYIQN 79

Query: 69  PILKPYLESPNAKKIGSSCGIPIPTC 95
           P+   Y+ SPNA+K  ++C +  PTC
Sbjct: 80  PLYSSYVTSPNARKTLAACDVAYPTC 103

[Close]

BLAST of Cp4.1LG03g15240.1 vs. TAIR10
Match: AT5G38170.1 (AT5G38170.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 77.0 bits (188), Expect = 6.8e-15
Identity = 37/86 (43.02%), Postives = 56/86 (65.12%), Query Frame = 1


Query: 9   VAVMAMVVLLTGAGVAEAVKCDPMEMRACLPAIKSSVPPTAECCDKVKKQEGCLCEYLKS 68
           V++ A  V L+G G A+ V CD +++ +C   + + VPP+ ECC K+K+Q+ C C Y+K 
Sbjct: 20  VSIRATEVKLSG-GEAD-VTCDAVQLSSCATPMLTGVPPSTECCGKLKEQQPCFCTYIKD 79

Query: 69  PILKPYLESPNAKKIGSSCGIPIPTC 95
           P    Y+ S NAKK  ++CG+P PTC
Sbjct: 80  PRYSQYVGSANAKKTLATCGVPYPTC 103

[Close]

BLAST of Cp4.1LG03g15240.1 vs. TAIR10
Match: AT1G07747.1 (AT1G07747.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 76.6 bits (187), Expect = 8.9e-15
Identity = 35/94 (37.23%), Postives = 56/94 (59.57%), Query Frame = 1


Query: 1  MKKRLCLLVAVMAMVVLLTGAGVAEAVKCDPMEMRACLPAIKSSVPPTAECCDKVKKQEG 60
          MK +   LV V  ++  +      E   C   +++ACLP I    PP+ +CC K+K ++ 
Sbjct: 1  MKMKFTTLVFVAFVLSSMAPTKAEEKAACVVTDLKACLPDIIGETPPSTKCCTKLKDKKS 60

Query: 61 CLCEYLKSPILKPYLESPNAKKIGSSCGIPIPTC 95
          C CEYLK+P++ PY+ S  AK++  +CG+P+P C
Sbjct: 61 CFCEYLKNPLIAPYMTS--AKQVLEACGVPVPVC 92

[Close]

BLAST of Cp4.1LG03g15240.1 vs. NCBI nr
Match: gi|700198657|gb|KGN53815.1| (hypothetical protein Csa_4G141230 [Cucumis sativus])

HSP 1 Score: 141.4 bits (355), Expect = 8.3e-31
Identity = 67/93 (72.04%), Postives = 80/93 (86.02%), Query Frame = 1


Query: 5   LCLLVAVMAMVV---LLTGAGVAEAVKCDPMEMRACLPAIKSSVPPTAECCDKVKKQEGC 64
           LCL V VMAMV+   L+TGAG+A+AV C+PMEMR CLPA++SSVPPTAECC+K+K+QE C
Sbjct: 10  LCLSVPVMAMVMVVALITGAGLADAVNCNPMEMRPCLPALESSVPPTAECCEKLKEQEPC 69

Query: 65  LCEYLKSPILKPYLESPNAKKIGSSCGIPIPTC 95
            C YLKSP+ KPYLESPNAKKI +SC +PIPTC
Sbjct: 70  FCAYLKSPVFKPYLESPNAKKIATSCRVPIPTC 102

[Close]

BLAST of Cp4.1LG03g15240.1 vs. NCBI nr
Match: gi|659086709|ref|XP_008444077.1| (PREDICTED: non-specific lipid-transfer protein 2-like [Cucumis melo])

HSP 1 Score: 136.0 bits (341), Expect = 3.5e-29
Identity = 66/93 (70.97%), Postives = 78/93 (83.87%), Query Frame = 1


Query: 5   LCLLVAVMA---MVVLLTGAGVAEAVKCDPMEMRACLPAIKSSVPPTAECCDKVKKQEGC 64
           LCL  ++MA   +V L+TGA +A+AV C+P EMR CLPA++SSVPPTAECC+K+K+QE C
Sbjct: 10  LCLSASMMATVMVVALITGARLADAVNCNPTEMRPCLPALESSVPPTAECCEKLKEQEPC 69

Query: 65  LCEYLKSPILKPYLESPNAKKIGSSCGIPIPTC 95
            CEYLKSPI K YLESPNAKKI SSCGIPIPTC
Sbjct: 70  FCEYLKSPIFKRYLESPNAKKIASSCGIPIPTC 102

[Close]

BLAST of Cp4.1LG03g15240.1 vs. NCBI nr
Match: gi|694439405|ref|XP_009346593.1| (PREDICTED: non-specific lipid-transfer protein 2-like [Pyrus x bretschneideri])

HSP 1 Score: 110.2 bits (274), Expect = 2.1e-21
Identity = 47/89 (52.81%), Postives = 67/89 (75.28%), Query Frame = 1


Query: 6  CLLVAVMAMVVLLTGAGVAEAVKCDPMEMRACLPAIKSSVPPTAECCDKVKKQEGCLCEY 65
          CL+VA++  V L   A   EAV C P+E+  CL AI+S  PP+A CC+K+K+Q+ C CEY
Sbjct: 11 CLMVAMV--VALCDEARTVEAVTCSPLELSPCLEAIRSGAPPSATCCEKLKEQQPCFCEY 70

Query: 66 LKSPILKPYLESPNAKKIGSSCGIPIPTC 95
          +K+P+LKPY+++PNAKK+ S+CG+P P C
Sbjct: 71 IKNPVLKPYIDNPNAKKVASACGVPFPQC 97

[Close]

BLAST of Cp4.1LG03g15240.1 vs. NCBI nr
Match: gi|658053478|ref|XP_008362493.1| (PREDICTED: non-specific lipid-transfer protein 2-like [Malus domestica])

HSP 1 Score: 105.9 bits (263), Expect = 3.9e-20
Identity = 47/89 (52.81%), Postives = 63/89 (70.79%), Query Frame = 1


Query: 6  CLLVAVMAMVVLLTGAGVAEAVKCDPMEMRACLPAIKSSVPPTAECCDKVKKQEGCLCEY 65
          CL+VAV   V L       EAV C P+E+  CL AI+S  PP+A CC+K+K+Q+ CLCEY
Sbjct: 11 CLMVAVX--VALCDEVRTTEAVTCSPLELSPCLEAIRSXTPPSATCCEKLKEQQPCLCEY 70

Query: 66 LKSPILKPYLESPNAKKIGSSCGIPIPTC 95
          +K+P LKPY+ +PNAKK+  +CG+P P C
Sbjct: 71 IKNPALKPYINNPNAKKVAXACGVPFPQC 97

[Close]

BLAST of Cp4.1LG03g15240.1 vs. NCBI nr
Match: gi|224079367|ref|XP_002305838.1| (hypothetical protein POPTR_0004s09510g [Populus trichocarpa])

HSP 1 Score: 104.4 bits (259), Expect = 1.1e-19
Identity = 46/92 (50.00%), Postives = 67/92 (72.83%), Query Frame = 1


Query: 3  KRLCLLVAVMAMVVLLTGAGVAEAVKCDPMEMRACLPAIKSSVPPTAECCDKVKKQEGCL 62
          K+  LLV ++ +V+LL  A V++AV C+P ++  CLPAI SS PP+  CC K+K+Q+ CL
Sbjct: 2  KKASLLVTMVVVVMLLAEAKVSQAVTCNPAQLSPCLPAISSSSPPSTTCCSKLKEQKPCL 61

Query: 63 CEYLKSPILKPYLESPNAKKIGSSCGIPIPTC 95
          C YLK P LK ++ SP A+K+ S+CG+P P+C
Sbjct: 62 CGYLKDPALKQFVSSPGARKVASACGVPYPSC 93

The following BLAST results are available for this feature:

BLAST of Cp4.1LG03g15240.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NLTP_VIGUN	7.3e-19	46.32	Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata PE=2 SV=...	[more]
NLTP2_PRUAR	9.9e-16	47.06	Non-specific lipid-transfer protein 2 OS=Prunus armeniaca PE=1 SV=1	[more]
NLTP2_HORVU	4.1e-14	36.17	Probable non-specific lipid-transfer protein OS=Hordeum vulgare GN=LTP2 PE=2 SV=...	[more]
NLTPX_ORYSI	4.1e-14	42.11	Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica GN=LTP-2 PE=...	[more]
NLTP2_APIGA	1.6e-13	49.21	Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum PE=1 SV=...	[more]

BLAST of Cp4.1LG03g15240.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KW09_CUCSA	5.8e-31	72.04	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G141230 PE=4 SV=1	[more]
B9H330_POPTR	7.8e-20	50.00	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s09510g PE=4 SV=1	[more]
A0A0B2QIV0_GLYSO	1.7e-19	49.47	Putative non-specific lipid-transfer protein AKCS9 OS=Glycine soja GN=glysoja_03...	[more]
I1N5L5_SOYBN	1.7e-19	49.47	Uncharacterized protein OS=Glycine max GN=GLYMA_19G002300 PE=4 SV=1	[more]
A5JUZ7_SESIN	5.1e-19	50.00	Lipid transfer protein OS=Sesamum indicum GN=LTP1 PE=2 SV=1	[more]

BLAST of Cp4.1LG03g15240.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G48750.1	2.0e-19	43.62	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT3G18280.1	1.3e-18	44.68	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT5G38160.1	6.8e-15	39.53	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT5G38170.1	6.8e-15	43.02	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT1G07747.1	8.9e-15	37.23	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]

BLAST of Cp4.1LG03g15240.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700198657\|gb\|KGN53815.1\|	8.3e-31	72.04	hypothetical protein Csa_4G141230 [Cucumis sativus]	[more]
gi\|659086709\|ref\|XP_008444077.1\|	3.5e-29	70.97	PREDICTED: non-specific lipid-transfer protein 2-like [Cucumis melo]	[more]
gi\|694439405\|ref\|XP_009346593.1\|	2.1e-21	52.81	PREDICTED: non-specific lipid-transfer protein 2-like [Pyrus x bretschneideri]	[more]
gi\|658053478\|ref\|XP_008362493.1\|	3.9e-20	52.81	PREDICTED: non-specific lipid-transfer protein 2-like [Malus domestica]	[more]
gi\|224079367\|ref\|XP_002305838.1\|	1.1e-19	50.00	hypothetical protein POPTR_0004s09510g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR016140	Bifunc_inhib/LTP/seed_store

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG03g15240	Cp4.1LG03g15240	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG03g15240.1:cds:001	Cp4.1LG03g15240.1:cds:001	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG03g15240.1	Cp4.1LG03g15240.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 11..92 score: 6.
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 29..94 score: 0.
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	unknown	SSF47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 28..94 score: 4.46
None	No IPR available	GENE3D	G3DSA:1.10.110.10		coord: 28..94 score: 3.0
None	No IPR available	PANTHER	PTHR33214	FAMILY NOT NAMED	coord: 1..94 score: 2.0