Cp4.1LG02g16580.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAGCCCAAACAATGCAAGCGATTTTCATAAACGGATCCACTTCTCATGAGCGCAGTCCATCGCCCAAAATCGAAGCCCATCAGATTCCTCAACTGCGATTTCATGGTTGCACCTATTCAGCGAGTCTAAAATCAATCCTTCTCGATCTCAGCTCATCCATTACAACCTTCTGCAAGAGACATTGTCACTGGTCGCAATTCAGAAGGGATAAGCATTTTCGCCTTGTCACCTGCAATAATGGCGTCCGAATCCGAGCACAAAGCTACAATAATCGACGGCAAACAAATTGCTCAGACTGTTAGATCTGAAATAGCGGAGGAAGTGAAAAAACTCTCTGAGAAATACGGAAAGGTTCAATTTCCTGTGCTTGAACGTTGTTTTTAGTATTTTGATCTATTATTGTGACAAATTATGCGTTATATCTGTCTGGTTTTAGTATTTTTCTTGTTCATTGTGGTGTGGGATTTGTGAAGGTTCCGGGGTTGGCGGTTGTGATTGTGGGGAGTAGAAAGGATTCGCAGAGTTATGTGAACATGAAGAGAAAGGCTTGCGCGGAAGTTGGAATCAAGTCCTTTGATTATGATCTTCCCGAGCAAGTGTCTGAGGCCGAATTGATCAGCAAGATCCATGAGTTGAATGCGAATCCTGAAGTGCATGGTTAATCTCTTCTGTGCTTTTATGCTTATGCTTACTTGATTTTTTAGTGCTACACTACAAATTTTATGGAGCATCCACTGTGTTTGAAATATCATAGTGAAATTGCATCTTTGATAGATAAACGTTACTTGGATTCATTTTTGTGATGTGTGAAAAAATGTTAATTAAAGTACAAGCACCCCTTTAGTGCTTGTAGAAGCATTTCAAGCATTTTAGGTGTTTATAGAAAATTTACAAAGTTACTCTTGTTTATGTGTCAACATTTGAAAAACTCTTCAAATTGCCTAAAAGTACTTTTTTAGTGTTCTAAGAGTAACTTACTGTTAATAATTTGTTCAAAATTTTAATGCTTAGAGTTTTGAATTTTGAATTTTTTTGCTTTCACAGGGATATTGGTTCAACTTCCTTTGCCAAAGCACATAAATGAGGAAAAAGTTTTATCTGAAATCAACATTGAGAAGGATGTAGATGGGTTTCATCCTCTGAACATTGGGAAACTTGCAATGAAAGGCAGAGATCCCTTATTCCTACCTTGCACTCCAAAGGCAATAACAAATGTTTAATCTTCTGTTAATTGGAAGAGCAATAGCTCCTTATTTAGCAATGTTCAAGATTTGGTTTTATGTACAGGGGTGTCTTGAGCTACTGTCACGAAGTGGAATAAGCATTAGGGGAAAGAAGGCAGTTGTTATGGGGCGAAGCAACATCGTTGGATTACCAGTTTCATTGCTGCTCCTTAAAGCAGATGCAACTGTGACGATTGTCCATTCCCGTTCTGTCAATCCAGAAAGTGTTATCCGCGAAGCTGACATTGTTATTGCTGCTGCAGGACAGGCACAAATGGTATGCTTGGCTTTACAATCACTTGTTTTCGCTTTCCCTATATTTCTATTTGAATATCTGTTTGGCTTCACCGAGAATATAGACTTTGATTCCTAAGTTTACTTGAAAGCAAACAATGCTATGAAATATGCTTTAGGTGCTAGAATAGTATTGGAAAAGAAAAAAAAGGGTTAGCATTGGAATATAATCCCTGAAGTTGGAGAATATAGACTTTGATTCCTAAGTTCTACCTATTTAAACTTTTCTTGATAAACACACTAAATCCATTTGGCCAATAAAAGGATGTTCCCCTTGGGAATGTCAAAAGGCGCCTGTTGGATGAAAGTCCCACATCGGCTAATTTAGGGAATGATCATGGATTTATAATCAAAGAATACTATCTCTTGGGGAATCCCAAAGCAAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATCATGGAAATCGTGTTTATCTAACGTGGTATCAGAGCCATGCCCTAAACTTAGCCATGTCAATAGAATCCTCAAAGGTCGAACAAAAGTATTGTGAGCCTTGAAGGCATAGTAAAAAATGACTAAGACTCCAAAAGAAAAGGAGTCGAGCCTCTATTAAGGGGAGGCGTACTTTGTTTGAGGGGAAGTGTTGGATGAAAGTCGCACATCGGCTAATTTAGGGAATGATCATGGGTTTATAATCAAAGAATACTATCTCTATTGGTATGAGGCCTTTTGGGGAAGCCCAAAGCAAAACCATGAGAGTTTATGCTCAAAGTAGACAGTATCATACCATTGTGGAGAGTCGTGTTCAATTAACAGCGCCAATCCTCCTTCAATAGGGGTTTGTATAATAGACCACCTCCTGGCTACCCTTTTTGTCAATGCCTCCCTTCCAAAGGAAAGTCTTACACAACTTCTCTATAGCTTTTGTGATTTTGGATAAGGGCGTGCCTTCCTCCTCCTGATATATGAGATGCCCTCCAATACTGCCACCGTTTCTCCATTTTTTCATTAATTGGCGCCCAAAAATTCAGAGTGCCAAATAGGTAGGAGGTCAGTAACCAACCTGGCAGCCAAAAGAAGATGTGACGAACTCAGCTCGCTGTGAATCTAACCCAACACCCAAAAGTTCCAATTTCTGACAATTAATATTTAGAGCCGAAGCTACCTCAAACTCATGGATGATATGGAAGAAGAATCGGAATTGAGGAGGTTGAGAAGAAGACTGGTGGGATTGTTGGGAAGACATGGCTGGTGGTGTAGGGTAGGAGAGAGGAAGTCGTGAGGAAACTTAAGCACAAGCATTAAACTCACCATATATCCACAAGTCCTCCAAGCTTGAGTACCATAAGTAATCATAATGCTTCCATTTGGATCCAAGCGATCATAACAATCTTTAAAGAGACCAAATGTGGTGGTCTGAACTCCACTGGAGCAGGCAAAAGAAGATGTTTGAAAGGTAATGCTTATCCTGTTTCAGCTACAATGCTGGTTGGGAGTGGGTGTTTTAAGTAGACAAAGTTACAAAGGAATGTTTGAAATTGGAAGTTCTTAAAAACCTAGATTTTGGAAGAAATGGCTAATGGGGATTTGAGTGAAGTTGAGTAAATGGGGGAAATAAAAATGGTGGGTTTTGTTGATAATTGCTACGTGTTTCTTCGGATTAATGAAACGAATGGTTTCTTCTATCGGAAGTGAGCTTGACTTTACTTTATCCAATTTTCTACCTTCTTCTATCTCTAGCTCCCACATAGTGTTGAATCAGCTCGTTCACCCAATAATCATACTGCCTCATTATTTAGTTAACAATATCGATAAAGCTAAATAGAATCATAAATCAAAGTTCAGGAACATAACAGAAAGATGTCGAAGTCGAAGAGATTAAATGCGCACACAAACCTTAAACTTTGCCAGAAGCATAAAGAAACAGGCATAGTCATTGCAGGCCAGTAATATCTGCTAGTAGAGAGCATTAGTTCTGTTAGCTTATTGATTTTGTTGGTTGATGTTAGATCAAGGGCAGTTGGATAAAACCAGGGGCTGCAGTGATTGATGTTGGTACAAACGCAGTTGATGATCCCACCCGAAAGTCGGGCTACCGGCTGGTTGGGGATGTAGATTTCCAGGAAGCTTGTAAAGTGGCTGGTTGGGTAACTCCTGTTCCCGGTGGTGTGGGTCCTATGACTGTTGCCATGCTGCTTAGGAACACTTTAGATGGAGCTAAGCGTGTGATCGAGCAGTGATACCATACCCATATCAAGTGGCTTCATTGTTGTGTTTCTAAGGTCTTGCAAATTTGGAGACAATTTTGTAGGGAAAATAAAAACCTTAATAATCGTGTGGATATCTTGAAGAATGAATAATTTTAGCTTGTTGAATGTTAATATGGATCCTTGTGGGACTTTCTTAGTAATTTATAAATAAATGTTCTACCTATTTTGTGCC TAGCCCAAACAATGCAAGCGATTTTCATAAACGGATCCACTTCTCATGAGCGCAGTCCATCGCCCAAAATCGAAGCCCATCAGATTCCTCAACTGCGATTTCATGGTTGCACCTATTCAGCGAGTCTAAAATCAATCCTTCTCGATCTCAGCTCATCCATTACAACCTTCTGCAAGAGACATTGTCACTGGTCGCAATTCAGAAGGGATAAGCATTTTCGCCTTGTCACCTGCAATAATGGCGTCCGAATCCGAGCACAAAGCTACAATAATCGACGGCAAACAAATTGCTCAGACTGTTAGATCTGAAATAGCGGAGGAAGTGAAAAAACTCTCTGAGAAATACGGAAAGGTTCCGGGGTTGGCGGTTGTGATTGTGGGGAGTAGAAAGGATTCGCAGAGTTATGTGAACATGAAGAGAAAGGCTTGCGCGGAAGTTGGAATCAAGTCCTTTGATTATGATCTTCCCGAGCAAGTGTCTGAGGCCGAATTGATCAGCAAGATCCATGAGTTGAATGCGAATCCTGAAGTGCATGGGATATTGGTTCAACTTCCTTTGCCAAAGCACATAAATGAGGAAAAAGTTTTATCTGAAATCAACATTGAGAAGGATGTAGATGGGTTTCATCCTCTGAACATTGGGAAACTTGCAATGAAAGGCAGAGATCCCTTATTCCTACCTTGCACTCCAAAGGCAATAACAAATGGGTGTCTTGAGCTACTGTCACGAAGTGGAATAAGCATTAGGGGAAAGAAGGCAGTTGTTATGGGGCGAAGCAACATCGTTGGATTACCAGTTTCATTGCTGCTCCTTAAAGCAGATGCAACTGTGACGATTGTCCATTCCCGTTCTGTCAATCCAGAAAGTGTTATCCGCGAAGCTGACATTGTTATTGCTGCTGCAGGACAGGCACAAATGATCAAGGGCAGTTGGATAAAACCAGGGGCTGCAGTGATTGATGTTGGTACAAACGCAGTTGATGATCCCACCCGAAAGTCGGGCTACCGGCTGGTTGGGGATGTAGATTTCCAGGAAGCTTGTAAAGTGGCTGGTTGGGTAACTCCTGTTCCCGGTGGTGTGGGTCCTATGACTGTTGCCATGCTGCTTAGGAACACTTTAGATGGAGCTAAGCGTGTGATCGAGCAGTGATACCATACCCATATCAAGTGGCTTCATTGTTGTGTTTCTAAGGTCTTGCAAATTTGGAGACAATTTTGTAGGGAAAATAAAAACCTTAATAATCGTGTGGATATCTTGAAGAATGAATAATTTTAGCTTGTTGAATGTTAATATGGATCCTTGTGGGACTTTCTTAGTAATTTATAAATAAATGTTCTACCTATTTTGTGCC ATGGCGTCCGAATCCGAGCACAAAGCTACAATAATCGACGGCAAACAAATTGCTCAGACTGTTAGATCTGAAATAGCGGAGGAAGTGAAAAAACTCTCTGAGAAATACGGAAAGGTTCCGGGGTTGGCGGTTGTGATTGTGGGGAGTAGAAAGGATTCGCAGAGTTATGTGAACATGAAGAGAAAGGCTTGCGCGGAAGTTGGAATCAAGTCCTTTGATTATGATCTTCCCGAGCAAGTGTCTGAGGCCGAATTGATCAGCAAGATCCATGAGTTGAATGCGAATCCTGAAGTGCATGGGATATTGGTTCAACTTCCTTTGCCAAAGCACATAAATGAGGAAAAAGTTTTATCTGAAATCAACATTGAGAAGGATGTAGATGGGTTTCATCCTCTGAACATTGGGAAACTTGCAATGAAAGGCAGAGATCCCTTATTCCTACCTTGCACTCCAAAGGCAATAACAAATGGGTGTCTTGAGCTACTGTCACGAAGTGGAATAAGCATTAGGGGAAAGAAGGCAGTTGTTATGGGGCGAAGCAACATCGTTGGATTACCAGTTTCATTGCTGCTCCTTAAAGCAGATGCAACTGTGACGATTGTCCATTCCCGTTCTGTCAATCCAGAAAGTGTTATCCGCGAAGCTGACATTGTTATTGCTGCTGCAGGACAGGCACAAATGATCAAGGGCAGTTGGATAAAACCAGGGGCTGCAGTGATTGATGTTGGTACAAACGCAGTTGATGATCCCACCCGAAAGTCGGGCTACCGGCTGGTTGGGGATGTAGATTTCCAGGAAGCTTGTAAAGTGGCTGGTTGGGTAACTCCTGTTCCCGGTGGTGTGGGTCCTATGACTGTTGCCATGCTGCTTAGGAACACTTTAGATGGAGCTAAGCGTGTGATCGAGCAGTGA MASESEHKATIIDGKQIAQTVRSEIAEEVKKLSEKYGKVPGLAVVIVGSRKDSQSYVNMKRKACAEVGIKSFDYDLPEQVSEAELISKIHELNANPEVHGILVQLPLPKHINEEKVLSEINIEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKAITNGCLELLSRSGISIRGKKAVVMGRSNIVGLPVSLLLLKADATVTIVHSRSVNPESVIREADIVIAAAGQAQMIKGSWIKPGAAVIDVGTNAVDDPTRKSGYRLVGDVDFQEACKVAGWVTPVPGGVGPMTVAMLLRNTLDGAKRVIEQ
BLAST of Cp4.1LG02g16580.1 vs. Swiss-Prot
Match: FOLD2_ARATH (Bifunctional protein FolD 2 OS=Arabidopsis thaliana GN=FOLD2 PE=2 SV=1) HSP 1 Score: 487.3 bits (1253), Expect = 1.2e-136 Identity = 245/300 (81.67%), Postives = 275/300 (91.67%), Query Frame = 1
BLAST of Cp4.1LG02g16580.1 vs. Swiss-Prot
Match: FOLD4_ARATH (Bifunctional protein FolD 4, chloroplastic OS=Arabidopsis thaliana GN=FOLD4 PE=1 SV=1) HSP 1 Score: 374.8 bits (961), Expect = 9.0e-103 Identity = 180/298 (60.40%), Postives = 233/298 (78.19%), Query Frame = 1
BLAST of Cp4.1LG02g16580.1 vs. Swiss-Prot
Match: FOLD1_ARATH (Bifunctional protein FolD 1, mitochondrial OS=Arabidopsis thaliana GN=FOLD1 PE=2 SV=1) HSP 1 Score: 356.3 bits (913), Expect = 3.3e-97 Identity = 175/297 (58.92%), Postives = 230/297 (77.44%), Query Frame = 1
BLAST of Cp4.1LG02g16580.1 vs. Swiss-Prot
Match: FOLD_MAGMM (Bifunctional protein FolD OS=Magnetococcus marinus (strain ATCC BAA-1437 / JCM 17883 / MC-1) GN=folD PE=3 SV=1) HSP 1 Score: 295.0 bits (754), Expect = 9.1e-79 Identity = 158/291 (54.30%), Postives = 203/291 (69.76%), Query Frame = 1
BLAST of Cp4.1LG02g16580.1 vs. Swiss-Prot
Match: FOLD_GEOUR (Bifunctional protein FolD OS=Geobacter uraniireducens (strain Rf4) GN=folD PE=3 SV=1) HSP 1 Score: 294.3 bits (752), Expect = 1.5e-78 Identity = 158/291 (54.30%), Postives = 205/291 (70.45%), Query Frame = 1
BLAST of Cp4.1LG02g16580.1 vs. TrEMBL
Match: A0A0A0KWH1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G001540 PE=3 SV=1) HSP 1 Score: 548.5 bits (1412), Expect = 5.1e-153 Identity = 279/303 (92.08%), Postives = 293/303 (96.70%), Query Frame = 1
BLAST of Cp4.1LG02g16580.1 vs. TrEMBL
Match: A0A067K8J8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13900 PE=3 SV=1) HSP 1 Score: 520.4 bits (1339), Expect = 1.5e-144 Identity = 258/303 (85.15%), Postives = 287/303 (94.72%), Query Frame = 1
BLAST of Cp4.1LG02g16580.1 vs. TrEMBL
Match: M5VKQ0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009269mg PE=3 SV=1) HSP 1 Score: 519.6 bits (1337), Expect = 2.5e-144 Identity = 263/303 (86.80%), Postives = 285/303 (94.06%), Query Frame = 1
BLAST of Cp4.1LG02g16580.1 vs. TrEMBL
Match: F6HZ29_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g00070 PE=3 SV=1) HSP 1 Score: 518.8 bits (1335), Expect = 4.3e-144 Identity = 262/303 (86.47%), Postives = 286/303 (94.39%), Query Frame = 1
BLAST of Cp4.1LG02g16580.1 vs. TrEMBL
Match: A0A068UM70_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00030020001 PE=3 SV=1) HSP 1 Score: 516.5 bits (1329), Expect = 2.1e-143 Identity = 260/310 (83.87%), Postives = 287/310 (92.58%), Query Frame = 1
BLAST of Cp4.1LG02g16580.1 vs. TAIR10
Match: AT3G12290.1 (AT3G12290.1 Amino acid dehydrogenase family protein) HSP 1 Score: 487.3 bits (1253), Expect = 7.0e-138 Identity = 245/300 (81.67%), Postives = 275/300 (91.67%), Query Frame = 1
BLAST of Cp4.1LG02g16580.1 vs. TAIR10
Match: AT4G00620.1 (AT4G00620.1 Amino acid dehydrogenase family protein) HSP 1 Score: 374.8 bits (961), Expect = 5.1e-104 Identity = 180/298 (60.40%), Postives = 233/298 (78.19%), Query Frame = 1
BLAST of Cp4.1LG02g16580.1 vs. TAIR10
Match: AT2G38660.1 (AT2G38660.1 Amino acid dehydrogenase family protein) HSP 1 Score: 356.3 bits (913), Expect = 1.9e-98 Identity = 175/297 (58.92%), Postives = 230/297 (77.44%), Query Frame = 1
BLAST of Cp4.1LG02g16580.1 vs. TAIR10
Match: AT4G00600.1 (AT4G00600.1 Amino acid dehydrogenase family protein) HSP 1 Score: 285.0 bits (728), Expect = 5.3e-77 Identity = 134/223 (60.09%), Postives = 176/223 (78.92%), Query Frame = 1
BLAST of Cp4.1LG02g16580.1 vs. NCBI nr
Match: gi|659108749|ref|XP_008454369.1| (PREDICTED: bifunctional protein FolD 2 isoform X1 [Cucumis melo]) HSP 1 Score: 550.4 bits (1417), Expect = 1.9e-153 Identity = 281/303 (92.74%), Postives = 293/303 (96.70%), Query Frame = 1
BLAST of Cp4.1LG02g16580.1 vs. NCBI nr
Match: gi|449469104|ref|XP_004152261.1| (PREDICTED: bifunctional protein FolD 2 isoform X1 [Cucumis sativus]) HSP 1 Score: 548.5 bits (1412), Expect = 7.3e-153 Identity = 279/303 (92.08%), Postives = 293/303 (96.70%), Query Frame = 1
BLAST of Cp4.1LG02g16580.1 vs. NCBI nr
Match: gi|700197629|gb|KGN52787.1| (hypothetical protein Csa_4G001540 [Cucumis sativus]) HSP 1 Score: 548.5 bits (1412), Expect = 7.3e-153 Identity = 279/303 (92.08%), Postives = 293/303 (96.70%), Query Frame = 1
BLAST of Cp4.1LG02g16580.1 vs. NCBI nr
Match: gi|802688671|ref|XP_012082722.1| (PREDICTED: bifunctional protein FolD 2 [Jatropha curcas]) HSP 1 Score: 520.4 bits (1339), Expect = 2.1e-144 Identity = 258/303 (85.15%), Postives = 287/303 (94.72%), Query Frame = 1
BLAST of Cp4.1LG02g16580.1 vs. NCBI nr
Match: gi|645258763|ref|XP_008235037.1| (PREDICTED: bifunctional protein FolD 2-like [Prunus mume]) HSP 1 Score: 520.0 bits (1338), Expect = 2.8e-144 Identity = 262/303 (86.47%), Postives = 286/303 (94.39%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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