Cp4.1LG02g07660.1 (mRNA) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG02g07660.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	P-loop containing nucleoside triphosphate hydrolases superfamily protein
Location	Cp4.1LG02 : 549336 .. 550455 (-)
Sequence length	621

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTAGTTTGTTGGAGCTGTAACAGCGTGGATGTTATATTTTGTTAGGCTGTTAATAGGATGATTTTGTGTATAAACATTCGCGTAATCTGGTTATTCATTAGGTAGAAAACCTGGAATTTTTTTACCCACTATCAACTTCCAAATATTCTGCGGGAACATGAAGCTCCATATGGCAGATTATTGGGGTTCAATCGATCTTAATCATCCTGCAATATTTGACACACCCGTGAACCCGGAAACTTAGAAGGCACTAATCGGCTATCTCAATAAGTTTGTTGGGAGGAAAGAGTACTATAAAAGAGTAGGAAAGGCTTGGAAACGTGAGCATTTGTTGTATGAACCAAGAGGTACAGGGAAGTCAAGCTTGGTCCCATGGCTAACTATCTGAACTTTGACATTTAGGATATGTGGGTCTTAGGGAAGTCCAATACATTCAGAGTTCAGAAGATTATTGATTGGCTCTGGAAGTCGTTCAATATTAGCAAATGAAGACATTGATTGCTCTATTGAGCTGCAAGATAGAAGTTCAGATTCAGAATATCGAACTAAATCGCAGAGGATGTAAAGGTAGGTCCCTAACCTGCACGAAATGTATCTAAAGTTTCATGAATTGTTTGGGCAGCTAACGAAGCTACTTATAAAATTGTTTGTTGCCCTCAGATTATTGTCTGGGTTATTGAACTTCATTGATGGCCTATGGTCGAGCTGAGGAGACTAGCGGATAGTGGTATTGAGCAGCTGGATACAGTCCAACCAGCCGCTCTACGTGGTTTGTGGTCAATAACACTATCCGCTAGACTCCTCTGCTCGACTCTAGGCCATCAATGAAGTTCAATAACCCAGACAATAATCTGAGTGCAACAAACAATTATAAGTAGCTTCGACTTCAGTGGTTCAAAGATACTGGCCTATAGTTACCTATTAATTCAGGAACACTCCCACTTAGAAATTGAAGAGCTATTAAATAAAGTTCAGGCAACACCTACTGAATTAGCTGGAGAGCTAATGAAGACTGACAACGTTACAAGTTCACTTCAAGGCCTTATTCAATTCCTCCACGGAAAGAGAGAGACGAGTCGAGCGCCAGACCGCAGAATAGATGCAGGAAAAGCTTAG

mRNA sequence

ATGGTTAGTAGAAAACCTGGAATTTTTTTACCCACTATCAACTTCCAAATATTCTGCGGGAACATGAAGCTCCATATGGCAGATTATTGGGGTTCAATCGATCTTAATCATCCTGCAATATTTGACACACCCGCACTAATCGGCTATCTCAATAAGTTTGTTGGGAGGAAAGAGTACTATAAAAGAGTAGGAAAGGCTTGGAAACGTGAGCATTTGTTGTATGAACCAAGAGGTACAGGGAAGTCAAGCTTGGGAAGTCCAATACATTCAGAGTTCAGAAGATTATTGATTGGCTCTGGAAGTCGTTCAATATTAGCAAATGAAGACATTGATTGCTCTATTGAGCTGCAAGATAGAAGTTCAGATTCAGAATATCGAACTAAATCGCAGAGGATTGGTTCAAAGATACTGGCCTATAGTTACCTATTAATTCAGGAACACTCCCACTTAGAAATTGAAGAGCTATTAAATAAAGTTCAGGCAACACCTACTGAATTAGCTGGAGAGCTAATGAAGACTGACAACGTTACAAGTTCACTTCAAGGCCTTATTCAATTCCTCCACGGAAAGAGAGAGACGAGTCGAGCGCCAGACCGCAGAATAGATGCAGGAAAAGCTTAG

Coding sequence (CDS)

ATGGTTAGTAGAAAACCTGGAATTTTTTTACCCACTATCAACTTCCAAATATTCTGCGGGAACATGAAGCTCCATATGGCAGATTATTGGGGTTCAATCGATCTTAATCATCCTGCAATATTTGACACACCCGCACTAATCGGCTATCTCAATAAGTTTGTTGGGAGGAAAGAGTACTATAAAAGAGTAGGAAAGGCTTGGAAACGTGAGCATTTGTTGTATGAACCAAGAGGTACAGGGAAGTCAAGCTTGGGAAGTCCAATACATTCAGAGTTCAGAAGATTATTGATTGGCTCTGGAAGTCGTTCAATATTAGCAAATGAAGACATTGATTGCTCTATTGAGCTGCAAGATAGAAGTTCAGATTCAGAATATCGAACTAAATCGCAGAGGATTGGTTCAAAGATACTGGCCTATAGTTACCTATTAATTCAGGAACACTCCCACTTAGAAATTGAAGAGCTATTAAATAAAGTTCAGGCAACACCTACTGAATTAGCTGGAGAGCTAATGAAGACTGACAACGTTACAAGTTCACTTCAAGGCCTTATTCAATTCCTCCACGGAAAGAGAGAGACGAGTCGAGCGCCAGACCGCAGAATAGATGCAGGAAAAGCTTAG

Protein sequence

MVSRKPGIFLPTINFQIFCGNMKLHMADYWGSIDLNHPAIFDTPALIGYLNKFVGRKEYYKRVGKAWKREHLLYEPRGTGKSSLGSPIHSEFRRLLIGSGSRSILANEDIDCSIELQDRSSDSEYRTKSQRIGSKILAYSYLLIQEHSHLEIEELLNKVQATPTELAGELMKTDNVTSSLQGLIQFLHGKRETSRAPDRRIDAGKA

Homology

[Close]

BLAST of Cp4.1LG02g07660.1 vs. Swiss-Prot
Match: HSR4_ARATH (Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana GN=HSR4 PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.2e-21
Identity = 61/132 (46.21%), Postives = 81/132 (61.36%), Query Frame = 1


Query: 21  NMKLHMADYWGSIDLNHPAIFDTPAL--------IGYLNKFVGRKEYYKRVGKAWKREHL 80
           NM  + +D W S+ L+HP+ F T A+        +  L+KFV R+++YKRVGKAWKR +L
Sbjct: 244 NMYGNYSDAWTSVTLDHPSTFKTLAMDSDVKTSVMEDLDKFVKRRDFYKRVGKAWKRGYL 303

Query: 81  LYEPRGTGKSSLGSPI------------------HSEFRRLLIGSGSRSILANEDIDCSI 127
           LY P GTGKSSL + +                  +SE RRLLI + +RSIL  EDIDCS+
Sbjct: 304 LYGPPGTGKSSLIAAMANHLNFDIYDLELTAVNNNSELRRLLIATANRSILIVEDIDCSL 363

[Close]

BLAST of Cp4.1LG02g07660.1 vs. Swiss-Prot
Match: AATPC_ARATH (AAA-ATPase At3g50940 OS=Arabidopsis thaliana GN=At3g50940 PE=2 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 8.5e-20
Identity = 58/121 (47.93%), Postives = 74/121 (61.16%), Query Frame = 1


Query: 30  WGSIDLNHPAIFDTPAL--------IGYLNKFVGRKEYYKRVGKAWKREHLLYEPRGTGK 89
           W S+ L+HP+ F T AL        +  L++FV RK +Y RVGKAWKR +LLY P GTGK
Sbjct: 201 WTSVTLDHPSTFRTLALDPEVKKNLVEDLDRFVQRKGFYGRVGKAWKRGYLLYGPPGTGK 260

Query: 90  SSLGSPI------------------HSEFRRLLIGSGSRSILANEDIDCSIELQDRSSDS 125
           SSL + I                  ++E RRLL+ + +RSIL  EDIDCSIEL+DRS+D 
Sbjct: 261 SSLIAAIANHLNFDIYDLDLTSLNNNAELRRLLMSTANRSILVVEDIDCSIELKDRSTDQ 320

[Close]

BLAST of Cp4.1LG02g07660.1 vs. Swiss-Prot
Match: AATPG_ARATH (AAA-ATPase At5g17740 OS=Arabidopsis thaliana GN=At5g17740 PE=3 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 7.2e-19
Identity = 53/121 (43.80%), Postives = 70/121 (57.85%), Query Frame = 1


Query: 25  HMADYWGSIDLNHPAIFDTPAL--------IGYLNKFVGRKEYYKRVGKAWKREHLLYEP 84
           HMA  W S++  HP+ FDT A+        I  L++FVGRK++YKRVGKAWKR +LLY P
Sbjct: 194 HMAQTWQSVNFKHPSTFDTMAMNDDLKRSMIEDLDRFVGRKDFYKRVGKAWKRGYLLYGP 253

Query: 85  RGTGKSSLGSPI------------------HSEFRRLLIGSGSRSILANEDIDCSIELQD 120
            GTGKSSL + +                   +  R LL+ + + SIL  EDIDCS++L  
Sbjct: 254 PGTGKSSLVAAMANYLKFDIYDLQLASVQGDAHLRSLLLATNNSSILLIEDIDCSVDLPT 313

[Close]

BLAST of Cp4.1LG02g07660.1 vs. Swiss-Prot
Match: AATP3_ARATH (AAA-ATPase At2g18193 OS=Arabidopsis thaliana GN=At2g18193 PE=2 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 9.4e-19
Identity = 52/121 (42.98%), Postives = 74/121 (61.16%), Query Frame = 1


Query: 30  WGSIDLNHPAIFDTPAL--------IGYLNKFVGRKEYYKRVGKAWKREHLLYEPRGTGK 89
           WG I+L HP+ FDT A+        I  L +F+ RKE+YKRVGKAWKR +LLY P GTGK
Sbjct: 197 WGCINLEHPSTFDTLAMDPNAKKKIIDDLERFLKRKEFYKRVGKAWKRGYLLYGPPGTGK 256

Query: 90  SSLGSPI------------------HSEFRRLLIGSGSRSILANEDIDCSIELQDRSSDS 125
           SSL + +                  + E +R+L+ + +RSIL  EDIDC+ E++DR +++
Sbjct: 257 SSLIAAMANYLKFDVFDLELSSIYDNGELKRVLLSTTNRSILVIEDIDCNAEVRDREAEN 316

[Close]

BLAST of Cp4.1LG02g07660.1 vs. Swiss-Prot
Match: AATPF_ARATH (AAA-ATPase At5g17730 OS=Arabidopsis thaliana GN=At5g17730 PE=3 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.2e-18
Identity = 56/140 (40.00%), Postives = 81/140 (57.86%), Query Frame = 1


Query: 30  WGSIDLNHPAIFDTPAL--------IGYLNKFVGRKEYYKRVGKAWKREHLLYEPRGTGK 89
           W S++L HP+ FDT A+        +G L++F+ RK++YKRVGK WKR +LLY P GTGK
Sbjct: 199 WQSVNLEHPSTFDTMAMNEELKRSVMGDLDRFIRRKDFYKRVGKPWKRGYLLYGPPGTGK 258

Query: 90  SSLGSPI------------------HSEFRRLLIGSGSRSILANEDIDCSIELQDRSSDS 144
           +SL + I                   ++ RRLL+G+ + SIL  EDIDC+++L  R    
Sbjct: 259 TSLVAAIANYLKFDIYDLQLASVREDADLRRLLLGTTNSSILLVEDIDCAVDLHTR---L 318

[Close]

BLAST of Cp4.1LG02g07660.1 vs. TrEMBL
Match: A0A0A0LG59_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G860250 PE=3 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 2.4e-29
Identity = 79/139 (56.83%), Postives = 91/139 (65.47%), Query Frame = 1


Query: 22  MKLHMADY-----WGSIDLNHPAIFDT--------PALIGYLNKFVGRKEYYKRVGKAWK 81
           MKLH  DY     WGSIDLNHPA FDT         ALI  LN F+ RKEYY+RVG+AWK
Sbjct: 188 MKLHTIDYNGTHYWGSIDLNHPATFDTIAMNPETKKALIDDLNTFIERKEYYRRVGRAWK 247

Query: 82  REHLLYEPRGTGKSSLGSPI------------------HSEFRRLLIGSGSRSILANEDI 130
           R +LLY P GTGKSSL + +                  +S+ RRLLIG+G+RSIL  EDI
Sbjct: 248 RGYLLYGPPGTGKSSLIAAMANYLKFDIYDMDLKEVQYNSDLRRLLIGTGNRSILVIEDI 307

[Close]

BLAST of Cp4.1LG02g07660.1 vs. TrEMBL
Match: A0A022QYB1_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a006796mg PE=3 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.3e-27
Identity = 93/231 (40.26%), Postives = 119/231 (51.52%), Query Frame = 1


Query: 28  DYWGSIDLNHPAIFDTPA--------LIGYLNKFVGRKEYYKRVGKAWKREHLLYEPRGT 87
           DYW S+ LNHPA F+T A        LIG L++F  RK+YY+RVGKAWKR +L Y P GT
Sbjct: 197 DYWSSVVLNHPATFETMAMDPDTKDDLIGDLDRFSRRKDYYRRVGKAWKRGYLFYGPPGT 256

Query: 88  GKSSLGSPI------------------HSEFRRLLIGSGSRSILANEDIDCSIEL----- 147
           GKSSL + +                  +S+ RRLLIGS +RSIL  EDIDC+I L     
Sbjct: 257 GKSSLVAAMANYLKFDVYDLDLREVQCNSDLRRLLIGSANRSILVIEDIDCNITLSGLLN 316

Query: 148 ---------------------QDRSSDSEYRTKSQRI----------GSKILAYSYLLI- 191
                                ++R   +  R     +          G KILA +YL I 
Sbjct: 317 FIDGLWSSCGDERIIVFTTNHKNRLDPALLRPGRMDVQLEMGYCKFSGFKILASTYLRID 376

[Close]

BLAST of Cp4.1LG02g07660.1 vs. TrEMBL
Match: A0A166ERH0_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_007721 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.1e-26
Identity = 83/204 (40.69%), Postives = 114/204 (55.88%), Query Frame = 1


Query: 22  MKLHM-----ADYWGSIDLNHPAIFDTPALIGYLNK--------FVGRKEYYKRVGKAWK 81
           +KLH      +  W S+ L HP+ FD  A+   L K        F+ RKEYYKR+GKAWK
Sbjct: 186 LKLHSLVSRGSTIWSSVKLEHPSTFDKMAMDPKLKKEIIQDLDLFLQRKEYYKRMGKAWK 245

Query: 82  REHLLYEPRGTGKSSLGSPI------------------HSEFRRLLIGSGSRSILANEDI 141
           R +LL+ P GTGKSSL + +                   S  R+LL+ + ++SIL  EDI
Sbjct: 246 RGYLLHGPPGTGKSSLIAAMANYLKFDIYDLQLMNVKSDSCLRKLLLATRNKSILVVEDI 305

Query: 142 DCSIELQDRSSDSEYRTKSQRIGSKILAYSYLLIQEHSH---LEIEELLNKVQATPTELA 192
           DCS+EL D       RT  Q   S+ILA +YL I+  SH    EI+EL+   + TP E A
Sbjct: 306 DCSVELPD-------RTGQQPRSSQILASNYLGIKIESHSRYKEIKELMGSTEVTPAEAA 365

[Close]

BLAST of Cp4.1LG02g07660.1 vs. TrEMBL
Match: A0A118K5A6_CYNCS (AAA+ ATPase domain-containing protein OS=Cynara cardunculus var. scolymus GN=Ccrd_012816 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.0e-24
Identity = 81/236 (34.32%), Postives = 121/236 (51.27%), Query Frame = 1


Query: 15   FQIFCGNMKLHMADYWGSIDLNHPAIFDTPAL--------IGYLNKFVGRKEYYKRVGKA 74
            F +   NM       W S++L+HPA F T A+        +  L++F  R+EYY++VGKA
Sbjct: 981  FTVNTKNMYSGRPTAWTSVNLDHPANFSTLAMDPDVKEKMMKDLDRFAARREYYRKVGKA 1040

Query: 75   WKREHLLYEPRGTGKSSLGSPI------------------HSEFRRLLIGSGSRSILANE 134
            WKR +LLY P GTGKSSL + +                  +SE R LL+ + +RSIL  E
Sbjct: 1041 WKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDLELTAIKSNSELRNLLVSTANRSILVVE 1100

Query: 135  DIDCSIELQDRSSDSEYRTKSQR-----------------------IGSKILAYSYLLIQ 194
            DIDCS+EL DR + +  +  ++                         G ++LA +YL I 
Sbjct: 1101 DIDCSVELHDRVAVAAAKALARENHRRALLRPGRMDVHIHMSYCTSSGFRVLASNYLNIT 1160

Query: 195  EHSHLE-IEELLNKVQATPTELAGELMKTDNVTSSLQGLIQFLHGKRETSRAPDRR 201
            +H   E IE+L+ +V+ TP E+A +L+K D+   +L GL+ F   KR+ +     R
Sbjct: 1161 QHDLFEKIEDLIREVEITPAEVAEQLLKDDDPDIALGGLVGFFDVKRKENEEAKAR 1216

[Close]

BLAST of Cp4.1LG02g07660.1 vs. TrEMBL
Match: A0A061FD45_THECC (P-loop containing nucleoside triphosphate hydrolases superfamily protein, putative OS=Theobroma cacao GN=TCM_034094 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.8e-24
Identity = 87/223 (39.01%), Postives = 116/223 (52.02%), Query Frame = 1


Query: 21  NMKLHMADY-----WGSIDLNHPAIFDTP-------ALIGYLNKFVGRKEYYKRVGKAWK 80
           ++KLH  DY     WG+I+L+HPA FD         ALI  L++F+ RKE+Y+RVGKAW 
Sbjct: 114 SLKLHTVDYNGTDYWGTINLDHPATFDMAMDPEVKKALIEDLDRFIRRKEFYRRVGKAWT 173

Query: 81  REHLLYEPRGTGKSSLGSPI------------------HSEFRRLLIGSG----SRSILA 140
             +LLY P GTGKSSL + +                  +S+ RRLLIG+G    S  +L 
Sbjct: 174 HGYLLYGPPGTGKSSLVAAMANHLKFDVYNLDLKEVQCNSDLRRLLIGTGYSLGSTELLD 233

Query: 141 N------------------EDIDCSIELQDRSSDSEYRTKSQRIGSKILAYSYLLIQEHS 191
                              + +D  +    R     + T     G + LA +YL IQ H 
Sbjct: 234 GLWSSCGDERIIVFTTNHKDSLDPVLLRPGRMDMHLHMTYCTFSGFRALASNYLQIQHHP 293

[Close]

BLAST of Cp4.1LG02g07660.1 vs. TAIR10
Match: AT3G50930.1 (AT3G50930.1 cytochrome BC1 synthesis)

HSP 1 Score: 104.8 bits (260), Expect = 6.7e-23
Identity = 61/132 (46.21%), Postives = 81/132 (61.36%), Query Frame = 1


Query: 21  NMKLHMADYWGSIDLNHPAIFDTPAL--------IGYLNKFVGRKEYYKRVGKAWKREHL 80
           NM  + +D W S+ L+HP+ F T A+        +  L+KFV R+++YKRVGKAWKR +L
Sbjct: 244 NMYGNYSDAWTSVTLDHPSTFKTLAMDSDVKTSVMEDLDKFVKRRDFYKRVGKAWKRGYL 303

Query: 81  LYEPRGTGKSSLGSPI------------------HSEFRRLLIGSGSRSILANEDIDCSI 127
           LY P GTGKSSL + +                  +SE RRLLI + +RSIL  EDIDCS+
Sbjct: 304 LYGPPGTGKSSLIAAMANHLNFDIYDLELTAVNNNSELRRLLIATANRSILIVEDIDCSL 363

[Close]

BLAST of Cp4.1LG02g07660.1 vs. TAIR10
Match: AT3G50940.1 (AT3G50940.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 98.6 bits (244), Expect = 4.8e-21
Identity = 58/121 (47.93%), Postives = 74/121 (61.16%), Query Frame = 1


Query: 30  WGSIDLNHPAIFDTPAL--------IGYLNKFVGRKEYYKRVGKAWKREHLLYEPRGTGK 89
           W S+ L+HP+ F T AL        +  L++FV RK +Y RVGKAWKR +LLY P GTGK
Sbjct: 201 WTSVTLDHPSTFRTLALDPEVKKNLVEDLDRFVQRKGFYGRVGKAWKRGYLLYGPPGTGK 260

Query: 90  SSLGSPI------------------HSEFRRLLIGSGSRSILANEDIDCSIELQDRSSDS 125
           SSL + I                  ++E RRLL+ + +RSIL  EDIDCSIEL+DRS+D 
Sbjct: 261 SSLIAAIANHLNFDIYDLDLTSLNNNAELRRLLMSTANRSILVVEDIDCSIELKDRSTDQ 320

[Close]

BLAST of Cp4.1LG02g07660.1 vs. TAIR10
Match: AT5G17740.1 (AT5G17740.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 95.5 bits (236), Expect = 4.0e-20
Identity = 53/121 (43.80%), Postives = 70/121 (57.85%), Query Frame = 1


Query: 25  HMADYWGSIDLNHPAIFDTPAL--------IGYLNKFVGRKEYYKRVGKAWKREHLLYEP 84
           HMA  W S++  HP+ FDT A+        I  L++FVGRK++YKRVGKAWKR +LLY P
Sbjct: 194 HMAQTWQSVNFKHPSTFDTMAMNDDLKRSMIEDLDRFVGRKDFYKRVGKAWKRGYLLYGP 253

Query: 85  RGTGKSSLGSPI------------------HSEFRRLLIGSGSRSILANEDIDCSIELQD 120
            GTGKSSL + +                   +  R LL+ + + SIL  EDIDCS++L  
Sbjct: 254 PGTGKSSLVAAMANYLKFDIYDLQLASVQGDAHLRSLLLATNNSSILLIEDIDCSVDLPT 313

[Close]

BLAST of Cp4.1LG02g07660.1 vs. TAIR10
Match: AT2G18193.1 (AT2G18193.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 95.1 bits (235), Expect = 5.3e-20
Identity = 52/121 (42.98%), Postives = 74/121 (61.16%), Query Frame = 1


Query: 30  WGSIDLNHPAIFDTPAL--------IGYLNKFVGRKEYYKRVGKAWKREHLLYEPRGTGK 89
           WG I+L HP+ FDT A+        I  L +F+ RKE+YKRVGKAWKR +LLY P GTGK
Sbjct: 197 WGCINLEHPSTFDTLAMDPNAKKKIIDDLERFLKRKEFYKRVGKAWKRGYLLYGPPGTGK 256

Query: 90  SSLGSPI------------------HSEFRRLLIGSGSRSILANEDIDCSIELQDRSSDS 125
           SSL + +                  + E +R+L+ + +RSIL  EDIDC+ E++DR +++
Sbjct: 257 SSLIAAMANYLKFDVFDLELSSIYDNGELKRVLLSTTNRSILVIEDIDCNAEVRDREAEN 316

[Close]

BLAST of Cp4.1LG02g07660.1 vs. TAIR10
Match: AT5G17730.1 (AT5G17730.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 94.7 bits (234), Expect = 6.9e-20
Identity = 56/140 (40.00%), Postives = 81/140 (57.86%), Query Frame = 1


Query: 30  WGSIDLNHPAIFDTPAL--------IGYLNKFVGRKEYYKRVGKAWKREHLLYEPRGTGK 89
           W S++L HP+ FDT A+        +G L++F+ RK++YKRVGK WKR +LLY P GTGK
Sbjct: 199 WQSVNLEHPSTFDTMAMNEELKRSVMGDLDRFIRRKDFYKRVGKPWKRGYLLYGPPGTGK 258

Query: 90  SSLGSPI------------------HSEFRRLLIGSGSRSILANEDIDCSIELQDRSSDS 144
           +SL + I                   ++ RRLL+G+ + SIL  EDIDC+++L  R    
Sbjct: 259 TSLVAAIANYLKFDIYDLQLASVREDADLRRLLLGTTNSSILLVEDIDCAVDLHTR---L 318

[Close]

BLAST of Cp4.1LG02g07660.1 vs. NCBI nr
Match: gi|659133058|ref|XP_008466531.1| (PREDICTED: mitochondrial chaperone BCS1-like [Cucumis melo])

HSP 1 Score: 139.8 bits (351), Expect = 5.3e-30
Identity = 80/139 (57.55%), Postives = 91/139 (65.47%), Query Frame = 1


Query: 22  MKLHM-----ADYWGSIDLNHPAIFDT--------PALIGYLNKFVGRKEYYKRVGKAWK 81
           +KLH       DYWGSIDLNHPA FDT         ALI  LN F+ RKEYYKRVG+AWK
Sbjct: 189 VKLHTIDYSGTDYWGSIDLNHPATFDTIAMNPETKKALIDDLNTFIERKEYYKRVGRAWK 248

Query: 82  REHLLYEPRGTGKSSLGSPI------------------HSEFRRLLIGSGSRSILANEDI 130
           R +LLY P GTGKSSL + +                  +S+ RRLLIG+G+RSIL  EDI
Sbjct: 249 RGYLLYGPPGTGKSSLVAAVANYLKFDIYDMDLREVQCNSDLRRLLIGTGNRSILVIEDI 308

[Close]

BLAST of Cp4.1LG02g07660.1 vs. NCBI nr
Match: gi|700204856|gb|KGN59989.1| (hypothetical protein Csa_3G860250 [Cucumis sativus])

HSP 1 Score: 137.1 bits (344), Expect = 3.4e-29
Identity = 79/139 (56.83%), Postives = 91/139 (65.47%), Query Frame = 1


Query: 22  MKLHMADY-----WGSIDLNHPAIFDT--------PALIGYLNKFVGRKEYYKRVGKAWK 81
           MKLH  DY     WGSIDLNHPA FDT         ALI  LN F+ RKEYY+RVG+AWK
Sbjct: 188 MKLHTIDYNGTHYWGSIDLNHPATFDTIAMNPETKKALIDDLNTFIERKEYYRRVGRAWK 247

Query: 82  REHLLYEPRGTGKSSLGSPI------------------HSEFRRLLIGSGSRSILANEDI 130
           R +LLY P GTGKSSL + +                  +S+ RRLLIG+G+RSIL  EDI
Sbjct: 248 RGYLLYGPPGTGKSSLIAAMANYLKFDIYDMDLKEVQYNSDLRRLLIGTGNRSILVIEDI 307

[Close]

BLAST of Cp4.1LG02g07660.1 vs. NCBI nr
Match: gi|778686647|ref|XP_004147876.2| (PREDICTED: probable mitochondrial chaperone BCS1-A [Cucumis sativus])

HSP 1 Score: 137.1 bits (344), Expect = 3.4e-29
Identity = 79/139 (56.83%), Postives = 91/139 (65.47%), Query Frame = 1


Query: 22  MKLHMADY-----WGSIDLNHPAIFDT--------PALIGYLNKFVGRKEYYKRVGKAWK 81
           MKLH  DY     WGSIDLNHPA FDT         ALI  LN F+ RKEYY+RVG+AWK
Sbjct: 206 MKLHTIDYNGTHYWGSIDLNHPATFDTIAMNPETKKALIDDLNTFIERKEYYRRVGRAWK 265

Query: 82  REHLLYEPRGTGKSSLGSPI------------------HSEFRRLLIGSGSRSILANEDI 130
           R +LLY P GTGKSSL + +                  +S+ RRLLIG+G+RSIL  EDI
Sbjct: 266 RGYLLYGPPGTGKSSLIAAMANYLKFDIYDMDLKEVQYNSDLRRLLIGTGNRSILVIEDI 325

[Close]

BLAST of Cp4.1LG02g07660.1 vs. NCBI nr
Match: gi|604326912|gb|EYU32906.1| (hypothetical protein MIMGU_mgv1a006796mg [Erythranthe guttata])

HSP 1 Score: 131.3 bits (329), Expect = 1.9e-27
Identity = 93/231 (40.26%), Postives = 119/231 (51.52%), Query Frame = 1


Query: 28  DYWGSIDLNHPAIFDTPA--------LIGYLNKFVGRKEYYKRVGKAWKREHLLYEPRGT 87
           DYW S+ LNHPA F+T A        LIG L++F  RK+YY+RVGKAWKR +L Y P GT
Sbjct: 197 DYWSSVVLNHPATFETMAMDPDTKDDLIGDLDRFSRRKDYYRRVGKAWKRGYLFYGPPGT 256

Query: 88  GKSSLGSPI------------------HSEFRRLLIGSGSRSILANEDIDCSIEL----- 147
           GKSSL + +                  +S+ RRLLIGS +RSIL  EDIDC+I L     
Sbjct: 257 GKSSLVAAMANYLKFDVYDLDLREVQCNSDLRRLLIGSANRSILVIEDIDCNITLSGLLN 316

Query: 148 ---------------------QDRSSDSEYRTKSQRI----------GSKILAYSYLLI- 191
                                ++R   +  R     +          G KILA +YL I 
Sbjct: 317 FIDGLWSSCGDERIIVFTTNHKNRLDPALLRPGRMDVQLEMGYCKFSGFKILASTYLRID 376

[Close]

BLAST of Cp4.1LG02g07660.1 vs. NCBI nr
Match: gi|1021049104|gb|KZN06884.1| (hypothetical protein DCAR_007721 [Daucus carota subsp. sativus])

HSP 1 Score: 128.3 bits (321), Expect = 1.6e-26
Identity = 83/204 (40.69%), Postives = 114/204 (55.88%), Query Frame = 1


Query: 22  MKLHM-----ADYWGSIDLNHPAIFDTPALIGYLNK--------FVGRKEYYKRVGKAWK 81
           +KLH      +  W S+ L HP+ FD  A+   L K        F+ RKEYYKR+GKAWK
Sbjct: 186 LKLHSLVSRGSTIWSSVKLEHPSTFDKMAMDPKLKKEIIQDLDLFLQRKEYYKRMGKAWK 245

Query: 82  REHLLYEPRGTGKSSLGSPI------------------HSEFRRLLIGSGSRSILANEDI 141
           R +LL+ P GTGKSSL + +                   S  R+LL+ + ++SIL  EDI
Sbjct: 246 RGYLLHGPPGTGKSSLIAAMANYLKFDIYDLQLMNVKSDSCLRKLLLATRNKSILVVEDI 305

Query: 142 DCSIELQDRSSDSEYRTKSQRIGSKILAYSYLLIQEHSH---LEIEELLNKVQATPTELA 192
           DCS+EL D       RT  Q   S+ILA +YL I+  SH    EI+EL+   + TP E A
Sbjct: 306 DCSVELPD-------RTGQQPRSSQILASNYLGIKIESHSRYKEIKELMGSTEVTPAEAA 365

The following BLAST results are available for this feature:

BLAST of Cp4.1LG02g07660.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
HSR4_ARATH	1.2e-21	46.21	Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana GN=HSR4 PE=2 SV=1	[more]
AATPC_ARATH	8.5e-20	47.93	AAA-ATPase At3g50940 OS=Arabidopsis thaliana GN=At3g50940 PE=2 SV=1	[more]
AATPG_ARATH	7.2e-19	43.80	AAA-ATPase At5g17740 OS=Arabidopsis thaliana GN=At5g17740 PE=3 SV=1	[more]
AATP3_ARATH	9.4e-19	42.98	AAA-ATPase At2g18193 OS=Arabidopsis thaliana GN=At2g18193 PE=2 SV=1	[more]
AATPF_ARATH	1.2e-18	40.00	AAA-ATPase At5g17730 OS=Arabidopsis thaliana GN=At5g17730 PE=3 SV=1	[more]

BLAST of Cp4.1LG02g07660.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LG59_CUCSA	2.4e-29	56.83	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G860250 PE=3 SV=1	[more]
A0A022QYB1_ERYGU	1.3e-27	40.26	Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a006796mg PE=3 SV=1	[more]
A0A166ERH0_DAUCA	1.1e-26	40.69	Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_007721 PE=4 SV=1	[more]
A0A118K5A6_CYNCS	1.0e-24	34.32	AAA+ ATPase domain-containing protein OS=Cynara cardunculus var. scolymus GN=Ccr...	[more]
A0A061FD45_THECC	1.8e-24	39.01	P-loop containing nucleoside triphosphate hydrolases superfamily protein, putati...	[more]

BLAST of Cp4.1LG02g07660.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G50930.1	6.7e-23	46.21	cytochrome BC1 synthesis	[more]
AT3G50940.1	4.8e-21	47.93	P-loop containing nucleoside triphosphate hydrolases superfamily pro...	[more]
AT5G17740.1	4.0e-20	43.80	P-loop containing nucleoside triphosphate hydrolases superfamily pro...	[more]
AT2G18193.1	5.3e-20	42.98	P-loop containing nucleoside triphosphate hydrolases superfamily pro...	[more]
AT5G17730.1	6.9e-20	40.00	P-loop containing nucleoside triphosphate hydrolases superfamily pro...	[more]

BLAST of Cp4.1LG02g07660.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659133058\|ref\|XP_008466531.1\|	5.3e-30	57.55	PREDICTED: mitochondrial chaperone BCS1-like [Cucumis melo]	[more]
gi\|700204856\|gb\|KGN59989.1\|	3.4e-29	56.83	hypothetical protein Csa_3G860250 [Cucumis sativus]	[more]
gi\|778686647\|ref\|XP_004147876.2\|	3.4e-29	56.83	PREDICTED: probable mitochondrial chaperone BCS1-A [Cucumis sativus]	[more]
gi\|604326912\|gb\|EYU32906.1\|	1.9e-27	40.26	hypothetical protein MIMGU_mgv1a006796mg [Erythranthe guttata]	[more]
gi\|1021049104\|gb\|KZN06884.1\|	1.6e-26	40.69	hypothetical protein DCAR_007721 [Daucus carota subsp. sativus]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG02g07660	Cp4.1LG02g07660	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG02g07660.1:cds:001	Cp4.1LG02g07660.1:cds:001	CDS
Cp4.1LG02g07660.1:cds:002	Cp4.1LG02g07660.1:cds:002	CDS
Cp4.1LG02g07660.1:cds:003	Cp4.1LG02g07660.1:cds:003	CDS
Cp4.1LG02g07660.1:cds:004	Cp4.1LG02g07660.1:cds:004	CDS
Cp4.1LG02g07660.1:cds:005	Cp4.1LG02g07660.1:cds:005	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG02g07660.1	Cp4.1LG02g07660.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 45..93 score: 2.
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 27..92 score: 2.7
None	No IPR available	PANTHER	PTHR23070	BCS1 AAA-TYPE ATPASE	coord: 22..202 score: 4.5
None	No IPR available	PANTHER	PTHR23070:SF30	SUBFAMILY NOT NAMED	coord: 22..202 score: 4.5