Cp4.1LG01g24240.1 (mRNA) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g24240.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Unknown protein
Location	Cp4.1LG01 : 19134543 .. 19135172 (-)
Sequence length	630

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCTGTGGAGAACAATTTGGAAGTTTTGGATCTGATCGACGACGATGCAGACGATCTCTCTCTCCGCGATTTTCCAATTCACGAACCAGATGATGTGGATACGCCATGTCGCTCTCCGTCCTACCACGATCTGTTTGAATTCTGCACCGATTTGAAGCAGAGAACAAGTTCCTCATCGCCGCCTAGTGAAATCGTTTTCTGCGGGAAGATATTGGACGCTGGATCTCTATCTCTCCGAGATAAAGATTCTGATGCGGAAGGGCGGAGTTTCCGAAGTAACTCGGAGTTGTTTATGCGAAACCAGAGCTTTCGGTCGAAATCGTTTTCATCGCCTGTAATCGGTGGTTTCGGATATCAGCGGAGTAGTTTGAGGAGGCCGATGGCGTTGATTGGATTAACGAGAACTCCGTCGAGAACAGAACTGAGCGAGATTCGGAGGAGACAGGCTCGGCTGGCACCGGCGCCGATGTTCCGCGTGGTTCCGGGGGAGGCGGCGGCAACTGTTGCCGCCGACGGTACCGGCGGAGAAATGAGTCCATGGAGCCTGATTAGGGCTCTCAGGTATAGGTCGGTTCTGGTTAGAGTGTTGGCTAAGGCGGCTTCTAGTTGTATAGCTCGTGCGTGA

mRNA sequence

ATGGCGTCTGTGGAGAACAATTTGGAAGTTTTGGATCTGATCGACGACGATGCAGACGATCTCTCTCTCCGCGATTTTCCAATTCACGAACCAGATGATGTGGATACGCCATGTCGCTCTCCGTCCTACCACGATCTGTTTGAATTCTGCACCGATTTGAAGCAGAGAACAAGTTCCTCATCGCCGCCTAGTGAAATCGTTTTCTGCGGGAAGATATTGGACGCTGGATCTCTATCTCTCCGAGATAAAGATTCTGATGCGGAAGGGCGGAGTTTCCGAAGTAACTCGGAGTTGTTTATGCGAAACCAGAGCTTTCGGTCGAAATCGTTTTCATCGCCTGTAATCGGTGGTTTCGGATATCAGCGGAGTAGTTTGAGGAGGCCGATGGCGTTGATTGGATTAACGAGAACTCCGTCGAGAACAGAACTGAGCGAGATTCGGAGGAGACAGGCTCGGCTGGCACCGGCGCCGATGTTCCGCGTGGTTCCGGGGGAGGCGGCGGCAACTGTTGCCGCCGACGGTACCGGCGGAGAAATGAGTCCATGGAGCCTGATTAGGGCTCTCAGGTATAGGTCGGTTCTGGTTAGAGTGTTGGCTAAGGCGGCTTCTAGTTGTATAGCTCGTGCGTGA

Coding sequence (CDS)

ATGGCGTCTGTGGAGAACAATTTGGAAGTTTTGGATCTGATCGACGACGATGCAGACGATCTCTCTCTCCGCGATTTTCCAATTCACGAACCAGATGATGTGGATACGCCATGTCGCTCTCCGTCCTACCACGATCTGTTTGAATTCTGCACCGATTTGAAGCAGAGAACAAGTTCCTCATCGCCGCCTAGTGAAATCGTTTTCTGCGGGAAGATATTGGACGCTGGATCTCTATCTCTCCGAGATAAAGATTCTGATGCGGAAGGGCGGAGTTTCCGAAGTAACTCGGAGTTGTTTATGCGAAACCAGAGCTTTCGGTCGAAATCGTTTTCATCGCCTGTAATCGGTGGTTTCGGATATCAGCGGAGTAGTTTGAGGAGGCCGATGGCGTTGATTGGATTAACGAGAACTCCGTCGAGAACAGAACTGAGCGAGATTCGGAGGAGACAGGCTCGGCTGGCACCGGCGCCGATGTTCCGCGTGGTTCCGGGGGAGGCGGCGGCAACTGTTGCCGCCGACGGTACCGGCGGAGAAATGAGTCCATGGAGCCTGATTAGGGCTCTCAGGTATAGGTCGGTTCTGGTTAGAGTGTTGGCTAAGGCGGCTTCTAGTTGTATAGCTCGTGCGTGA

Protein sequence

MASVENNLEVLDLIDDDADDLSLRDFPIHEPDDVDTPCRSPSYHDLFEFCTDLKQRTSSSSPPSEIVFCGKILDAGSLSLRDKDSDAEGRSFRSNSELFMRNQSFRSKSFSSPVIGGFGYQRSSLRRPMALIGLTRTPSRTELSEIRRRQARLAPAPMFRVVPGEAAATVAADGTGGEMSPWSLIRALRYRSVLVRVLAKAASSCIARA

Homology

[Close]

BLAST of Cp4.1LG01g24240.1 vs. TrEMBL
Match: A0A0A0KNN4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G494420 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 4.9e-46
Identity = 127/217 (58.53%), Postives = 151/217 (69.59%), Query Frame = 1


Query: 1   MASVENNLEVLDLID--DDADDLSLRDFPIHEPDDV--DTPCRSPSYHDLFEFCTDLKQR 60
           M SV+ N ++LD++D  DD D LS RDFPI EP     D+        D FEF TDLK++
Sbjct: 1   MESVKYNPDLLDVLDVQDDEDTLSFRDFPILEPQSEAGDSCSDHDDRQDFFEFRTDLKRK 60

Query: 61  TSSSSPPSEIVFCGKILDAGSLSLRDKDSDAEGRSFRSNSELFMRNQSFR----SKSFSS 120
           TSS  PPSEIVFCG+ LD      RD+DS A  R+ RS S L +RNQSFR    S+ FSS
Sbjct: 61  TSSLLPPSEIVFCGRTLDI----FRDEDS-ASSRN-RSESSL-IRNQSFRYGNGSRPFSS 120

Query: 121 PVIGG-FGYQRSSLRRPMALIGLTRTPSRTELSEIRRRQARLAPAPMFRVVPGE-AAATV 180
             +GG F  QRS+ RRPMALIGLT+TPSR ELSEIR+RQARLAP PMF VVP E   + V
Sbjct: 121 SAVGGLFEIQRSNSRRPMALIGLTKTPSRIELSEIRKRQARLAPTPMFHVVPKETTVSVV 180

Query: 181 AADGTGGEMSPWSLIRALRYRSVLVRVLAKAASSCIA 208
            ADG    +SPW LI+ LRYRSV+VRVLAKAAS+C++
Sbjct: 181 TADGYESGISPWRLIKPLRYRSVVVRVLAKAASTCMS 210

[Close]

BLAST of Cp4.1LG01g24240.1 vs. TrEMBL
Match: M5X0J2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011401mg PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 8.4e-14
Identity = 73/200 (36.50%), Postives = 103/200 (51.50%), Query Frame = 1


Query: 17  DADDLSLRDFPIHEPDD--VDTPCRSPSYH--DLFEFCTDLKQRTSSSSPPSEIVFCGK- 76
           + D LSL D  +++  D  V+ P  SPS    D FEFC D          P ++VFCGK 
Sbjct: 14  EEDALSLCDLLLNDDGDESVEIPKASPSSDPADFFEFCVD----PICGYLPMDVVFCGKS 73

Query: 77  ILDAGSLSLRDKDSDAEGRS-FRSNSELFMRNQSFRSKSFSS--PVIGGFGYQRSSLRRP 136
           IL +  ++L   +S+ + ++ F S SE    +Q+  S + S   P  G      S+ R+ 
Sbjct: 74  ILCSKPITLPTPESEPQIKNPFFSRSESLRFSQASASPARSDLVPTTGKCRSPSSNSRKH 133

Query: 137 MALIGLTRTPSRTELSEIRRRQARLAPAPMFRVVPGEAAATVAADGTGGEMSPWSLIRAL 196
             LIGL +     +LSEIR+RQ+R APAPMF V+ G   + V    +G     W L+R L
Sbjct: 134 KVLIGLVKYQPEMDLSEIRKRQSRRAPAPMFPVINGGEQSAVTGGKSGSGKGHWGLMRPL 193

Query: 197 RYRSVLVRVLAKAASSCIAR 209
           R  S L+  LAKA   C+ R
Sbjct: 194 RCPSHLLSALAKATLGCVPR 209

[Close]

BLAST of Cp4.1LG01g24240.1 vs. TrEMBL
Match: B9SUQ0_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0714620 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.5e-10
Identity = 72/208 (34.62%), Postives = 106/208 (50.96%), Query Frame = 1


Query: 4   VENNLEVLDLIDDDADDLSLRDFPIHEPDDVDTPCRSPSYH--DLFEFCTDLKQRTSSSS 63
           +ENN    + I++  D LSL DF + + +       SPS    D FEF T      S+S+
Sbjct: 1   MENN----NSIEEFEDALSLCDFALCDQESSIEHPDSPSSQEEDFFEFSTSSTSSVSNST 60

Query: 64  PPSEIVFCGKILDAGSLSLRDKDSDAEGRS---FRSNSELFMRNQS-FRSKSFSSPVIGG 123
             + I+FCGKI+   S    + D+D    +   F S+  L M N++   SK+ SS     
Sbjct: 61  ADN-IIFCGKII---SCKTENDDNDQRYNNPLCFSSSPSLRMVNRNKITSKNSSSKPALP 120

Query: 124 FGYQRSSLRRPMALIGLTRTPSRTELSEIRRRQAR--LAPAPMFRVVPGEAAATVAADGT 183
              + SS ++   +IGLTR PS+ ELS++R RQ R    P PMF  V G  AA V+  G+
Sbjct: 121 PPARSSSSKKHKVIIGLTRIPSKMELSDLRERQNRKLQTPPPMFPAVVGSEAAAVSGGGS 180

Query: 184 GGEMSPWSLIRALRYRSVLVRVLAKAAS 204
                 WSL+R  +Y   +V  L +++S
Sbjct: 181 SKRSRNWSLLRRAQY---MVSTLTRSSS 197

[Close]

BLAST of Cp4.1LG01g24240.1 vs. TrEMBL
Match: A0A061FUT8_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_043094 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 3.3e-10
Identity = 73/211 (34.60%), Postives = 98/211 (46.45%), Query Frame = 1


Query: 21  LSLRDFPIH----EPDDVDTPCRSPSYHDLFEFCTDLKQRTSSSSPPSEIVFCGKI---- 80
           LSL D P+     +P D   P  SPS H+LFEF   L    + S+   +IVFCGK+    
Sbjct: 39  LSLCDLPLENQVLDPFDHHPPT-SPS-HELFEFPFTLN---TFSNNKDDIVFCGKLIKEQ 98

Query: 81  --------------LDAGSLSLRDKDSDAEGRSFRSNSELFMRNQSFRSKSFSSPVIGGF 140
                         L +  L   DK         +S     +  + F+S+S SS      
Sbjct: 99  DFDDLDDQSRYLFPLSSARLLNSDKKDLGSLCLAKSKPNSALSTKFFKSQSCSSS----- 158

Query: 141 GYQRSSLRRPMALIGLTRTPSRTELSEIRRRQARLAPAPMF-RVVPGEAAATVAADGTGG 200
               SS R+   LIGL + P + ELS+I++RQ+R  P+PMF  V  G+     A DG GG
Sbjct: 159 ----SSSRKHKVLIGLAKIPPKMELSDIKKRQSRRNPSPMFPPVAAGDLEVVAAGDGCGG 218

Query: 201 EM--SPWSLIRALRYRSVLVRVLAKAASSCI 207
                 W L+R LR R+ L   LAKA+  CI
Sbjct: 219 RRRGHHWGLLRPLRCRANLATALAKASLGCI 235

[Close]

BLAST of Cp4.1LG01g24240.1 vs. TrEMBL
Match: A0A059BGZ2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G02810 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.6e-09
Identity = 72/210 (34.29%), Postives = 97/210 (46.19%), Query Frame = 1


Query: 16  DDADDLSLRDFPIHEPDDVDTPCRSPSYHDLFEFCTDLKQRTSSSSPPSE-----IVFCG 75
           D+ D LS  D P+     +D P   P    L+    D      S+ PP+       +FCG
Sbjct: 14  DEDDALSFCDLPL--TTSLDQPRDGPPSPPLW----DAPDFEFSAGPPAASAVDAFLFCG 73

Query: 76  KILDAGSLSLRDKDSDAEGRSFRSNSELF-------MRNQSFR---SKSFSSPVIGGFGY 135
           + +          DS     SFR +           +R+ S R   S+S ++P       
Sbjct: 74  RSIPFDERERHRVDSFGRLDSFRRDGAKIRFAGGQLLRSNSLRMKRSRSSAAPAAASASA 133

Query: 136 QRSSLRRP-MALIGLTRTPSRTELSEIRRRQARLAPAPMFRVVPGEAAATVAADGTGGEM 195
             SS RR   ALIG+T+ P+R ELS+IR+RQ R APAP+F     E    V ADG+GG  
Sbjct: 134 GSSSFRRRHRALIGITKFPARMELSDIRKRQGRRAPAPLFPA--AEVGKQVVADGSGGG- 193

Query: 196 SPWSLIRALRYRSVLVRVLAKAASSCIARA 210
              SL+R LR RS     LA+A+  CI  A
Sbjct: 194 GHRSLLRPLRCRSHFANALARASLGCIPHA 214

[Close]

BLAST of Cp4.1LG01g24240.1 vs. NCBI nr
Match: gi|700196046|gb|KGN51223.1| (hypothetical protein Csa_5G494420 [Cucumis sativus])

HSP 1 Score: 192.6 bits (488), Expect = 7.0e-46
Identity = 127/217 (58.53%), Postives = 151/217 (69.59%), Query Frame = 1


Query: 1   MASVENNLEVLDLID--DDADDLSLRDFPIHEPDDV--DTPCRSPSYHDLFEFCTDLKQR 60
           M SV+ N ++LD++D  DD D LS RDFPI EP     D+        D FEF TDLK++
Sbjct: 1   MESVKYNPDLLDVLDVQDDEDTLSFRDFPILEPQSEAGDSCSDHDDRQDFFEFRTDLKRK 60

Query: 61  TSSSSPPSEIVFCGKILDAGSLSLRDKDSDAEGRSFRSNSELFMRNQSFR----SKSFSS 120
           TSS  PPSEIVFCG+ LD      RD+DS A  R+ RS S L +RNQSFR    S+ FSS
Sbjct: 61  TSSLLPPSEIVFCGRTLDI----FRDEDS-ASSRN-RSESSL-IRNQSFRYGNGSRPFSS 120

Query: 121 PVIGG-FGYQRSSLRRPMALIGLTRTPSRTELSEIRRRQARLAPAPMFRVVPGE-AAATV 180
             +GG F  QRS+ RRPMALIGLT+TPSR ELSEIR+RQARLAP PMF VVP E   + V
Sbjct: 121 SAVGGLFEIQRSNSRRPMALIGLTKTPSRIELSEIRKRQARLAPTPMFHVVPKETTVSVV 180

Query: 181 AADGTGGEMSPWSLIRALRYRSVLVRVLAKAASSCIA 208
            ADG    +SPW LI+ LRYRSV+VRVLAKAAS+C++
Sbjct: 181 TADGYESGISPWRLIKPLRYRSVVVRVLAKAASTCMS 210

[Close]

BLAST of Cp4.1LG01g24240.1 vs. NCBI nr
Match: gi|596005850|ref|XP_007218398.1| (hypothetical protein PRUPE_ppa011401mg [Prunus persica])

HSP 1 Score: 85.5 bits (210), Expect = 1.2e-13
Identity = 73/200 (36.50%), Postives = 103/200 (51.50%), Query Frame = 1


Query: 17  DADDLSLRDFPIHEPDD--VDTPCRSPSYH--DLFEFCTDLKQRTSSSSPPSEIVFCGK- 76
           + D LSL D  +++  D  V+ P  SPS    D FEFC D          P ++VFCGK 
Sbjct: 14  EEDALSLCDLLLNDDGDESVEIPKASPSSDPADFFEFCVD----PICGYLPMDVVFCGKS 73

Query: 77  ILDAGSLSLRDKDSDAEGRS-FRSNSELFMRNQSFRSKSFSS--PVIGGFGYQRSSLRRP 136
           IL +  ++L   +S+ + ++ F S SE    +Q+  S + S   P  G      S+ R+ 
Sbjct: 74  ILCSKPITLPTPESEPQIKNPFFSRSESLRFSQASASPARSDLVPTTGKCRSPSSNSRKH 133

Query: 137 MALIGLTRTPSRTELSEIRRRQARLAPAPMFRVVPGEAAATVAADGTGGEMSPWSLIRAL 196
             LIGL +     +LSEIR+RQ+R APAPMF V+ G   + V    +G     W L+R L
Sbjct: 134 KVLIGLVKYQPEMDLSEIRKRQSRRAPAPMFPVINGGEQSAVTGGKSGSGKGHWGLMRPL 193

Query: 197 RYRSVLVRVLAKAASSCIAR 209
           R  S L+  LAKA   C+ R
Sbjct: 194 RCPSHLLSALAKATLGCVPR 209

[Close]

BLAST of Cp4.1LG01g24240.1 vs. NCBI nr
Match: gi|645255127|ref|XP_008233355.1| (PREDICTED: uncharacterized protein LOC103332396 [Prunus mume])

HSP 1 Score: 78.2 bits (191), Expect = 1.9e-11
Identity = 72/210 (34.29%), Postives = 100/210 (47.62%), Query Frame = 1


Query: 5   ENNLEVLDLIDDDADDLSLRDFPIHEPDDVDTPCRSPSYH--DLFEFCTDLKQRTSSSSP 64
           E+ L + DL+ DD  D           + V+TP  SPS    D FEFC D          
Sbjct: 16  EDALSLCDLLLDDDGD-----------ESVETPKASPSSDPADFFEFCVD----PICGYL 75

Query: 65  PSEIVFCGK-ILDAGSLSLRDKDSDAEGRSF-RSNSELFMRNQSFRSKSFSSPVIGGFGY 124
           P ++VFCGK IL +  ++L   +   +   F RS S  F +  +  ++S   P  G    
Sbjct: 76  PMDVVFCGKSILCSKPITLPTPEPQIKNPFFSRSESLRFSQASASPARSDPVPATGKCRS 135

Query: 125 QRSSLRRPMALIGLTRTPSRTELSEIRRRQARLAPAPMFRVVPGEAAATVAADGTGGEMS 184
             S+ R+   LIGL +     +LSEIR+RQ+R APAPMF V+ G   + V     G    
Sbjct: 136 PSSNSRKHKVLIGLVKYQPEMDLSEIRKRQSRRAPAPMFPVINGGEQSAVVGGKRGSGKG 195

Query: 185 PWS--LIRALRYRSVLVRVLAKAASSCIAR 209
            W   ++R LR  S L+  LAKA   C+ R
Sbjct: 196 HWGPRMMRQLRCPSHLLSALAKATLGCVPR 210

[Close]

BLAST of Cp4.1LG01g24240.1 vs. NCBI nr
Match: gi|223530821|gb|EEF32685.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 73.9 bits (180), Expect = 3.6e-10
Identity = 72/208 (34.62%), Postives = 106/208 (50.96%), Query Frame = 1


Query: 4   VENNLEVLDLIDDDADDLSLRDFPIHEPDDVDTPCRSPSYH--DLFEFCTDLKQRTSSSS 63
           +ENN    + I++  D LSL DF + + +       SPS    D FEF T      S+S+
Sbjct: 1   MENN----NSIEEFEDALSLCDFALCDQESSIEHPDSPSSQEEDFFEFSTSSTSSVSNST 60

Query: 64  PPSEIVFCGKILDAGSLSLRDKDSDAEGRS---FRSNSELFMRNQS-FRSKSFSSPVIGG 123
             + I+FCGKI+   S    + D+D    +   F S+  L M N++   SK+ SS     
Sbjct: 61  ADN-IIFCGKII---SCKTENDDNDQRYNNPLCFSSSPSLRMVNRNKITSKNSSSKPALP 120

Query: 124 FGYQRSSLRRPMALIGLTRTPSRTELSEIRRRQAR--LAPAPMFRVVPGEAAATVAADGT 183
              + SS ++   +IGLTR PS+ ELS++R RQ R    P PMF  V G  AA V+  G+
Sbjct: 121 PPARSSSSKKHKVIIGLTRIPSKMELSDLRERQNRKLQTPPPMFPAVVGSEAAAVSGGGS 180

Query: 184 GGEMSPWSLIRALRYRSVLVRVLAKAAS 204
                 WSL+R  +Y   +V  L +++S
Sbjct: 181 SKRSRNWSLLRRAQY---MVSTLTRSSS 197

[Close]

BLAST of Cp4.1LG01g24240.1 vs. NCBI nr
Match: gi|590564785|ref|XP_007009764.1| (Uncharacterized protein TCM_043094 [Theobroma cacao])

HSP 1 Score: 73.6 bits (179), Expect = 4.7e-10
Identity = 73/211 (34.60%), Postives = 98/211 (46.45%), Query Frame = 1


Query: 21  LSLRDFPIH----EPDDVDTPCRSPSYHDLFEFCTDLKQRTSSSSPPSEIVFCGKI---- 80
           LSL D P+     +P D   P  SPS H+LFEF   L    + S+   +IVFCGK+    
Sbjct: 39  LSLCDLPLENQVLDPFDHHPPT-SPS-HELFEFPFTLN---TFSNNKDDIVFCGKLIKEQ 98

Query: 81  --------------LDAGSLSLRDKDSDAEGRSFRSNSELFMRNQSFRSKSFSSPVIGGF 140
                         L +  L   DK         +S     +  + F+S+S SS      
Sbjct: 99  DFDDLDDQSRYLFPLSSARLLNSDKKDLGSLCLAKSKPNSALSTKFFKSQSCSSS----- 158

Query: 141 GYQRSSLRRPMALIGLTRTPSRTELSEIRRRQARLAPAPMF-RVVPGEAAATVAADGTGG 200
               SS R+   LIGL + P + ELS+I++RQ+R  P+PMF  V  G+     A DG GG
Sbjct: 159 ----SSSRKHKVLIGLAKIPPKMELSDIKKRQSRRNPSPMFPPVAAGDLEVVAAGDGCGG 218

Query: 201 EM--SPWSLIRALRYRSVLVRVLAKAASSCI 207
                 W L+R LR R+ L   LAKA+  CI
Sbjct: 219 RRRGHHWGLLRPLRCRANLATALAKASLGCI 235

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g24240.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG01g24240.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KNN4_CUCSA	4.9e-46	58.53	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G494420 PE=4 SV=1	[more]
M5X0J2_PRUPE	8.4e-14	36.50	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011401mg PE=4 SV=1	[more]
B9SUQ0_RICCO	2.5e-10	34.62	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0714620 PE=4 SV=1	[more]
A0A061FUT8_THECC	3.3e-10	34.60	Uncharacterized protein OS=Theobroma cacao GN=TCM_043094 PE=4 SV=1	[more]
A0A059BGZ2_EUCGR	1.6e-09	34.29	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G02810 PE=4 SV=1	[more]

BLAST of Cp4.1LG01g24240.1 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG01g24240.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700196046\|gb\|KGN51223.1\|	7.0e-46	58.53	hypothetical protein Csa_5G494420 [Cucumis sativus]	[more]
gi\|596005850\|ref\|XP_007218398.1\|	1.2e-13	36.50	hypothetical protein PRUPE_ppa011401mg [Prunus persica]	[more]
gi\|645255127\|ref\|XP_008233355.1\|	1.9e-11	34.29	PREDICTED: uncharacterized protein LOC103332396 [Prunus mume]	[more]
gi\|223530821\|gb\|EEF32685.1\|	3.6e-10	34.62	conserved hypothetical protein [Ricinus communis]	[more]
gi\|590564785\|ref\|XP_007009764.1\|	4.7e-10	34.60	Uncharacterized protein TCM_043094 [Theobroma cacao]	[more]

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG01g24240	Cp4.1LG01g24240	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG01g24240.1:cds:001	Cp4.1LG01g24240.1:cds:001	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG01g24240.1	Cp4.1LG01g24240.1-protein	polypeptide