Cp4.1LG01g23800.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGAAGCTCAGGTCAAAGAGGTTCTGCAGAAGCTCCACTTTCAGGTTTGGAAGCTTTGTCAGCAGCTGCAACAACAAGATCAAAGTCGCCGATGACCACGACGAGGACGACGGCAGCCTGACGGAAATCAAGTGGGAGCTCCGGCCCGGAGGCATGCTGGTGCAGAGGAGAGAGATCGCCGGTGGATCCACTTTGACCGGAGAAGAAACAATCACTATTAGAGTCTCAACTGTCTCGCAATTCCATCACATTTCGGTCGAACCCACCTCAACTTTTGGTGAGTTTCAATTCCACATTAACTAATTTAGGGAATAATCATCGGTTTAGGAATACATCTCAAGACTTTTTGGGAAAACCCAAAGCAAAATTATGAAAGCTTACGCTGAAAATAGACAATATCATACTATCGTGGAGATCTATGATTCTTAACGAACTCTGCTTGAATAAAAACCAAAACTTTGTGGTGAAAAATTTGATGGGTTTTGTTTGAATTTCAATAAAAATCAAAACTTTCTTGAAAATTTTGATGGGTTTTGTTTGAATTTCAATTTGGATTATAAAGTAATTGATGGGTTTAATTGTGTGATTTTTTCAGGGGAATTGAAGATGATTCTATCAATGGTGAGTGGGTTAGAACCAAGAGAGCAAAGATTGCTATTCAAAGGGAAAGAGAGAGAGGACGGTGAGTATCTACACATGGTTGGAGTGGGAGACAAAGACAAAGTTCTTCTTCTCCAAGATCCAGCGATCAAAGACAGGAAGCTTCATGGCTTGGCAGCAGGGCAGCCAATTAGTGTATAATAATAATACAATTAGTATTAATTAATCCAAAAACATGCATGTTTTTGATACCACTAACCCTCAGGAAAATGCCAAACTGTCTGTCCTTGAAGGCCTTTTGTTTTGTTTTTGTAAGAATTGTGGTGGTTTTTAAGTATAATGTTTGAGCTATAATACAAAATGGCTCGTCTGTAATGTGTTGATGCTTGTCTGAGTCATTATGTTTGTTGATTTTTGTATCCAAACAAAGATTGATTCTGAAAGAATGCATCTCCAGATCTCCTATACCTCTCTGTTCTTCTAACATCTCTCTCATGAAATTAATATTAAAATTTG ATGATGAAGCTCAGGTCAAAGAGGTTCTGCAGAAGCTCCACTTTCAGGTTTGGAAGCTTTGTCAGCAGCTGCAACAACAAGATCAAAGTCGCCGATGACCACGACGAGGACGACGGCAGCCTGACGGAAATCAAGTGGGAGCTCCGGCCCGGAGGCATGCTGGTGCAGAGGAGAGAGATCGCCGGGGAATTGAAGATGATTCTATCAATGGTGAGTGGGTTAGAACCAAGAGAGCAAAGATTGCTATTCAAAGGGAAAGAGAGAGAGGACGGTGAGTATCTACACATGGTTGGAGTGGGAGACAAAGACAAAGTTCTTCTTCTCCAAGATCCAGCGATCAAAGACAGGAAGCTTCATGGCTTGGCAGCAGGGCAGCCAATTAGTGTATAATAATAATACAATTAGTATTAATTAATCCAAAAACATGCATGTTTTTGATACCACTAACCCTCAGGAAAATGCCAAACTGTCTGTCCTTGAAGGCCTTTTGTTTTGTTTTTGTAAGAATTGTGGTGGTTTTTAAGTATAATGTTTGAGCTATAATACAAAATGGCTCGTCTGTAATGTGTTGATGCTTGTCTGAGTCATTATGTTTGTTGATTTTTGTATCCAAACAAAGATTGATTCTGAAAGAATGCATCTCCAGATCTCCTATACCTCTCTGTTCTTCTAACATCTCTCTCATGAAATTAATATTAAAATTTG ATGATGAAGCTCAGGTCAAAGAGGTTCTGCAGAAGCTCCACTTTCAGGTTTGGAAGCTTTGTCAGCAGCTGCAACAACAAGATCAAAGTCGCCGATGACCACGACGAGGACGACGGCAGCCTGACGGAAATCAAGTGGGAGCTCCGGCCCGGAGGCATGCTGGTGCAGAGGAGAGAGATCGCCGGGGAATTGAAGATGATTCTATCAATGGTGAGTGGGTTAGAACCAAGAGAGCAAAGATTGCTATTCAAAGGGAAAGAGAGAGAGGACGGTGAGTATCTACACATGGTTGGAGTGGGAGACAAAGACAAAGTTCTTCTTCTCCAAGATCCAGCGATCAAAGACAGGAAGCTTCATGGCTTGGCAGCAGGGCAGCCAATTAGTGTATAA MMKLRSKRFCRSSTFRFGSFVSSCNNKIKVADDHDEDDGSLTEIKWELRPGGMLVQRREIAGELKMILSMVSGLEPREQRLLFKGKEREDGEYLHMVGVGDKDKVLLLQDPAIKDRKLHGLAAGQPISV
BLAST of Cp4.1LG01g23800.1 vs. Swiss-Prot
Match: BAG2_ARATH (BAG family molecular chaperone regulator 2 OS=Arabidopsis thaliana GN=BAG2 PE=1 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.4e-07 Identity = 33/101 (32.67%), Postives = 56/101 (55.45%), Query Frame = 1
BLAST of Cp4.1LG01g23800.1 vs. Swiss-Prot
Match: BAG3_ARATH (BAG family molecular chaperone regulator 3 OS=Arabidopsis thaliana GN=BAG3 PE=1 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 3.0e-07 Identity = 35/109 (32.11%), Postives = 55/109 (50.46%), Query Frame = 1
BLAST of Cp4.1LG01g23800.1 vs. Swiss-Prot
Match: BAG1_ARATH (BAG family molecular chaperone regulator 1 OS=Arabidopsis thaliana GN=BAG1 PE=1 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 8.8e-07 Identity = 31/104 (29.81%), Postives = 53/104 (50.96%), Query Frame = 1
BLAST of Cp4.1LG01g23800.1 vs. TrEMBL
Match: A0A0A0KNY5_CUCSA (Protein binding protein OS=Cucumis sativus GN=Csa_5G517800 PE=4 SV=1) HSP 1 Score: 198.0 bits (502), Expect = 7.2e-48 Identity = 112/166 (67.47%), Postives = 119/166 (71.69%), Query Frame = 1
BLAST of Cp4.1LG01g23800.1 vs. TrEMBL
Match: B9SLT0_RICCO (Protein binding protein, putative OS=Ricinus communis GN=RCOM_0531000 PE=4 SV=1) HSP 1 Score: 161.4 bits (407), Expect = 7.4e-37 Identity = 87/155 (56.13%), Postives = 104/155 (67.10%), Query Frame = 1
BLAST of Cp4.1LG01g23800.1 vs. TrEMBL
Match: A0A067E335_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031040mg PE=4 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 9.1e-35 Identity = 94/159 (59.12%), Postives = 101/159 (63.52%), Query Frame = 1
BLAST of Cp4.1LG01g23800.1 vs. TrEMBL
Match: A0A067LPC0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10204 PE=4 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 3.4e-34 Identity = 87/158 (55.06%), Postives = 104/158 (65.82%), Query Frame = 1
BLAST of Cp4.1LG01g23800.1 vs. TrEMBL
Match: V4TJ37_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016973mg PE=4 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 7.7e-34 Identity = 93/159 (58.49%), Postives = 101/159 (63.52%), Query Frame = 1
BLAST of Cp4.1LG01g23800.1 vs. TAIR10
Match: AT5G14360.1 (AT5G14360.1 Ubiquitin-like superfamily protein) HSP 1 Score: 124.8 bits (312), Expect = 3.9e-29 Identity = 76/153 (49.67%), Postives = 91/153 (59.48%), Query Frame = 1
BLAST of Cp4.1LG01g23800.1 vs. TAIR10
Match: AT5G40630.1 (AT5G40630.1 Ubiquitin-like superfamily protein) HSP 1 Score: 106.3 bits (264), Expect = 1.4e-23 Identity = 68/157 (43.31%), Postives = 86/157 (54.78%), Query Frame = 1
BLAST of Cp4.1LG01g23800.1 vs. TAIR10
Match: AT5G62100.1 (AT5G62100.1 BCL-2-associated athanogene 2) HSP 1 Score: 57.4 bits (137), Expect = 7.6e-09 Identity = 33/101 (32.67%), Postives = 56/101 (55.45%), Query Frame = 1
BLAST of Cp4.1LG01g23800.1 vs. TAIR10
Match: AT5G07220.1 (AT5G07220.1 BCL-2-associated athanogene 3) HSP 1 Score: 56.2 bits (134), Expect = 1.7e-08 Identity = 35/109 (32.11%), Postives = 55/109 (50.46%), Query Frame = 1
BLAST of Cp4.1LG01g23800.1 vs. TAIR10
Match: AT5G52060.1 (AT5G52060.1 BCL-2-associated athanogene 1) HSP 1 Score: 54.7 bits (130), Expect = 4.9e-08 Identity = 31/104 (29.81%), Postives = 53/104 (50.96%), Query Frame = 1
BLAST of Cp4.1LG01g23800.1 vs. NCBI nr
Match: gi|449450038|ref|XP_004142771.1| (PREDICTED: BAG family molecular chaperone regulator 2-like [Cucumis sativus]) HSP 1 Score: 198.0 bits (502), Expect = 1.0e-47 Identity = 112/166 (67.47%), Postives = 119/166 (71.69%), Query Frame = 1
BLAST of Cp4.1LG01g23800.1 vs. NCBI nr
Match: gi|659117910|ref|XP_008458851.1| (PREDICTED: BAG family molecular chaperone regulator 2-like [Cucumis melo]) HSP 1 Score: 193.7 bits (491), Expect = 1.9e-46 Identity = 109/166 (65.66%), Postives = 118/166 (71.08%), Query Frame = 1
BLAST of Cp4.1LG01g23800.1 vs. NCBI nr
Match: gi|255572016|ref|XP_002526949.1| (PREDICTED: BAG family molecular chaperone regulator 2 [Ricinus communis]) HSP 1 Score: 161.4 bits (407), Expect = 1.1e-36 Identity = 87/155 (56.13%), Postives = 104/155 (67.10%), Query Frame = 1
BLAST of Cp4.1LG01g23800.1 vs. NCBI nr
Match: gi|641826442|gb|KDO45662.1| (hypothetical protein CISIN_1g031040mg [Citrus sinensis]) HSP 1 Score: 154.5 bits (389), Expect = 1.3e-34 Identity = 94/159 (59.12%), Postives = 101/159 (63.52%), Query Frame = 1
BLAST of Cp4.1LG01g23800.1 vs. NCBI nr
Match: gi|802539533|ref|XP_012071469.1| (PREDICTED: BAG family molecular chaperone regulator 2-like [Jatropha curcas]) HSP 1 Score: 152.5 bits (384), Expect = 4.9e-34 Identity = 87/158 (55.06%), Postives = 104/158 (65.82%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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