Cp4.1LG01g20580.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAACAAACAAAAGTCGATCTTATTTTAAAGTAAAATTGAAAGGCCTATTAGCTTAGTCGTGAAGTACTTTGCTAGTTGGGGTTTGGCGTGGAGTCGGAGTCCCTCCCATTATAAGTCGTCCATTGGCTCCTTCATCTTCCTAATCGAGTTGCAGAGCTATGGCGGATTCTAGGGTAGATACAATTTCGAGGTTAGCGCAATGGAGAATCGACAGCCTCGGCCCTTGCAACATCAAGAAATCCGATCCTTTCAAGGTCGGAATCTGGAATTGGTACTCTTCTCTCAACACTTCATTTCATTTTTACTCAGATTAGAAGAACATCATTAATTTTATGTTAATGGATTTATGTACTGGATTTGAGGCATTTGTCGGTTGACAAGAGTCGATATCTGTACATTCGTTTGTTCCCTGAGCCATCGAAGATCTCGAAGGAACAGCCTCCAATTGCTCGGTTTGTTATTCGAGTCTCTAGCGTTGGACCGAACCGTAGACCTGCTATATCTCCCAGTATGTGTTCTTATCCGCTTTCCTGATTCTTATGTTGCGTTTTTACTTTGAGCTTTGCATCCTGTGATTGAAAATTCTTGAAGCTGTATCCGCTGAGGAAAAGGATTGGGAATTTGGGGATGGAAGAACAGTGAGAGTAACTTTCTCTGTTTCTCTTCATGATTTTACCTTTTAGAACTTTTTTATTGACTTTTGTTGAAGTGCTAGTCAATAAGGTCACTTTTAGAATTGAAAATTACATATAGTTTCACAATATCAAAAAGAAAAAATGTAAAACCATTTAATAATTTTCAATAATTATTGAGTTTTTCATAAATTGTTCTGCAGAATTCATGAATCATTTTCTTAAATAATACACGTGAAGCAATCAACAACTTGTAAACTTCATCAACGAAACTGGATACTTAGTGCCATATTTCATTTGTTATACATCAATAATTTATCATTTATCATTTAAAGGTCATTGAGTAATCTATTTTCAAAGGAATTTAAATGACTGCAATTATTGTTAAATCTGTTAATATGTATAACTATTGGTTGTAAATTGTTATTTTTTCTCCTTATTGTTCTTAGCCATTTTACATGTAAGATACCCTTTCTACTGTTAGATGAACACGACTCTTCACAATAGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGGCTTTGCTTTGGGTTTCCCCAAAAGGCCTCACACCAATGGAGAGAGTATTCCTTGATTATAAATCCATGATCATTTCCTAAATTAGCGGATGTGGGACTTTCATTATCCAACATCTACTACTACCACTACTACTGATTCATTGAGGAAGCTCTGTGTAAGCTTTTGTTTTTCGGATGAGAAAATGCAACAAATCTAACGGGAAAATCTGTCAAAATCTCGTATCTAATTGATATATTTTTAGCCCTTTCTTTATGAGAAATCTGTTGCTTAGTTTAGACCACTTGGAGCCTTCGGCCCAACAATTATGTTCAAATCTTGTTCTTTTTTGGGTCAAATGGCTTGATGTTTTATGGTACTTGAATTACTTGGGCTTATTTATACAGTTGATGAACTGCTGTTTTCCTCCTGCAGTTAATGAGAGAGTTCTTCGAACTAGTGAAGACTTTGTTTGGGCTGTTGATTCCACCTTCCATGGTCGCTTCATTGTCGATGTCGAATTTCTTGATTTGAAGATCTGCCCTGTGAATGTGAGTTCCAAACTTCCAATACTCAGTTGTGTTTGATGCACTTAAGATGTCATCTTCTGCGATGGATTTAACTGAACTTCAATTCGACATTTCATTTGATGCCCATTTCTTATCATAAATTTATGGGAACTCTTTTGGCTCGGTCGAATCACCAATCGACCCAAAAGTTTAAGTTGATGAGTTATAAATAGTAAATTTCACTATTTTTATACTCGAATGTTGGATAGAAAATCGATATAGGGGTTTGAATATAAGATGTTCTGCTCTGATATATTATGTTAAATCACCGATCAACTTAATTTCGTGGGTTGCGGTAGATTTAACTATATCAATACTCTAATAGGCTCTAATCCTAATTCTTGAGTTAGTTTGAAAATCTGTCTATTCTTCATTCATGTAATCTTGACTGTTTTGATATGGATATATTTGCTAGCCACAGTTTATCTAACAGTTGAATCTAAAAGGGTTTAAAGGGAGGGGAACCGAATTCTATATGGCCAATGGAGGGAATGATGCAATCTGTATCGTCTCAAAGCACTCTTCAATGTCTCTCGCGCATGCTGGACGAGGCTATCCATGCCGATGTCACCATCAACACGATCGATGGCACTTTACGAGCTCACAAAGCCATTTTATCAGCAAGTTCTCCTGTATTCAAGAGCATGTTCCATCACAATCTCAAGGAAAAAGAGTCTTCCATCATCTACATAGAAGACATGTCTCTAGATGCCTGCATGACTATGTTACGTTACTTGTATGGAACCATAAAAGAAGAGGACTTCTGGAAGCATCGAGTGTCGCTTCTCGGGGCAGCAAACAAGTACGATATTGCAGACCTAAAAGATGCGTGCGAGGAAAGCCTCTTGGAAGACATAAACTCGGTGAACGTCCTCGAGAGACTGCAAGAAGCATGGCTTTATAAGCTGCATAAACTGAAGAAAGGATGCTTGGCATACTTGTTCGATTTCGGTAAGGTCTACGACATTGGCGACGAAATAAATAACTTCTTCAGGCAAGCGGACCGGGAACTGTTGGTCGAGATGTTCCAAGAAGTTCTTACAGTGTGGAAACCAGTTTAATAGGTGTAAGTTTTCATCCCCATCAAGTGGGAAGCTTTGCTCTTACACCTGATAAATATGTACACGTAAATGTATATATATGTGAAGGGTATTTGGAACCACTTTTCTTTTCTTTTTTTCTTTTTATTTTTAGTTTTTAGGGTGATGATATGATGGTGTTTCTACAAACTAGTCATTATGGTGTGATTTCATACCATGTGTATACTTTATGAGGTACATATTTTGTATAAATTTTTAATTACAAGGTTAGACGAACCCGACTCTCCACAATGGTATGATATTATCAACTTTTGCTTTGGGCTTCCAAAAGGCATCGTACCAATGGAGAGAGTATTCTTT AAACAAACAAAAGTCGATCTTATTTTAAAGTAAAATTGAAAGGCCTATTAGCTTAGTCGTGAAGTACTTTGCTAGTTGGGGTTTGGCGTGGAGTCGGAGTCCCTCCCATTATAAGTCGTCCATTGGCTCCTTCATCTTCCTAATCGAGTTGCAGAGCTATGGCGGATTCTAGGGTAGATACAATTTCGAGGTTAGCGCAATGGAGAATCGACAGCCTCGGCCCTTGCAACATCAAGAAATCCGATCCTTTCAAGGTCGGAATCTGGAATTGGCATTTGTCGGTTGACAAGAGTCGATATCTGTACATTCGTTTGTTCCCTGAGCCATCGAAGATCTCGAAGGAACAGCCTCCAATTGCTCGGTTTGTTATTCGAGTCTCTAGCGTTGGACCGAACCGTAGACCTGCTATATCTCCCATTAATGAGAGAGTTCTTCGAACTAGTGAAGACTTTGTTTGGGCTGTTGATTCCACCTTCCATGGTCGCTTCATTGTCGATGTCGAATTTCTTGATTTGAAGATCTGCCCTGTGAATGGAGGGGAACCGAATTCTATATGGCCAATGGAGGGAATGATGCAATCTGTATCGTCTCAAAGCACTCTTCAATGTCTCTCGCGCATGCTGGACGAGGCTATCCATGCCGATGTCACCATCAACACGATCGATGGCACTTTACGAGCTCACAAAGCCATTTTATCAGCAAGTTCTCCTGTATTCAAGAGCATGTTCCATCACAATCTCAAGGAAAAAGAGTCTTCCATCATCTACATAGAAGACATGTCTCTAGATGCCTGCATGACTATGTTACGTTACTTGTATGGAACCATAAAAGAAGAGGACTTCTGGAAGCATCGAGTGTCGCTTCTCGGGGCAGCAAACAAGTACGATATTGCAGACCTAAAAGATGCGTGCGAGGAAAGCCTCTTGGAAGACATAAACTCGGTGAACGTCCTCGAGAGACTGCAAGAAGCATGGCTTTATAAGCTGCATAAACTGAAGAAAGGATGCTTGGCATACTTGTTCGATTTCGGTAAGGTCTACGACATTGGCGACGAAATAAATAACTTCTTCAGGCAAGCGGACCGGGAACTGTTGGTCGAGATGTTCCAAGAAGTTCTTACAGTGTGGAAACCAGTTTAATAGGTGTAAGTTTTCATCCCCATCAAGTGGGAAGCTTTGCTCTTACACCTGATAAATATGTACACGTAAATGTATATATATGTGAAGGGTATTTGGAACCACTTTTCTTTTCTTTTTTTCTTTTTATTTTTAGTTTTTAGGGTGATGATATGATGGTGTTTCTACAAACTAGTCATTATGGTGTGATTTCATACCATGTGTATACTTTATGAGGTACATATTTTGTATAAATTTTTAATTACAAGGTTAGACGAACCCGACTCTCCACAATGGTATGATATTATCAACTTTTGCTTTGGGCTTCCAAAAGGCATCGTACCAATGGAGAGAGTATTCTTT ATGGCGGATTCTAGGGTAGATACAATTTCGAGGTTAGCGCAATGGAGAATCGACAGCCTCGGCCCTTGCAACATCAAGAAATCCGATCCTTTCAAGGTCGGAATCTGGAATTGGCATTTGTCGGTTGACAAGAGTCGATATCTGTACATTCGTTTGTTCCCTGAGCCATCGAAGATCTCGAAGGAACAGCCTCCAATTGCTCGGTTTGTTATTCGAGTCTCTAGCGTTGGACCGAACCGTAGACCTGCTATATCTCCCATTAATGAGAGAGTTCTTCGAACTAGTGAAGACTTTGTTTGGGCTGTTGATTCCACCTTCCATGGTCGCTTCATTGTCGATGTCGAATTTCTTGATTTGAAGATCTGCCCTGTGAATGGAGGGGAACCGAATTCTATATGGCCAATGGAGGGAATGATGCAATCTGTATCGTCTCAAAGCACTCTTCAATGTCTCTCGCGCATGCTGGACGAGGCTATCCATGCCGATGTCACCATCAACACGATCGATGGCACTTTACGAGCTCACAAAGCCATTTTATCAGCAAGTTCTCCTGTATTCAAGAGCATGTTCCATCACAATCTCAAGGAAAAAGAGTCTTCCATCATCTACATAGAAGACATGTCTCTAGATGCCTGCATGACTATGTTACGTTACTTGTATGGAACCATAAAAGAAGAGGACTTCTGGAAGCATCGAGTGTCGCTTCTCGGGGCAGCAAACAAGTACGATATTGCAGACCTAAAAGATGCGTGCGAGGAAAGCCTCTTGGAAGACATAAACTCGGTGAACGTCCTCGAGAGACTGCAAGAAGCATGGCTTTATAAGCTGCATAAACTGAAGAAAGGATGCTTGGCATACTTGTTCGATTTCGGTAAGGTCTACGACATTGGCGACGAAATAAATAACTTCTTCAGGCAAGCGGACCGGGAACTGTTGGTCGAGATGTTCCAAGAAGTTCTTACAGTGTGGAAACCAGTTTAA MADSRVDTISRLAQWRIDSLGPCNIKKSDPFKVGIWNWHLSVDKSRYLYIRLFPEPSKISKEQPPIARFVIRVSSVGPNRRPAISPINERVLRTSEDFVWAVDSTFHGRFIVDVEFLDLKICPVNGGEPNSIWPMEGMMQSVSSQSTLQCLSRMLDEAIHADVTINTIDGTLRAHKAILSASSPVFKSMFHHNLKEKESSIIYIEDMSLDACMTMLRYLYGTIKEEDFWKHRVSLLGAANKYDIADLKDACEESLLEDINSVNVLERLQEAWLYKLHKLKKGCLAYLFDFGKVYDIGDEINNFFRQADRELLVEMFQEVLTVWKPV
BLAST of Cp4.1LG01g20580.1 vs. Swiss-Prot
Match: Y1178_ARATH (BTB/POZ domain-containing protein At1g21780 OS=Arabidopsis thaliana GN=At1g21780 PE=1 SV=1) HSP 1 Score: 518.1 bits (1333), Expect = 7.1e-146 Identity = 237/326 (72.70%), Postives = 291/326 (89.26%), Query Frame = 1
BLAST of Cp4.1LG01g20580.1 vs. Swiss-Prot
Match: Y1576_ARATH (BTB/POZ domain-containing protein At1g55760 OS=Arabidopsis thaliana GN=At1g55760 PE=2 SV=1) HSP 1 Score: 348.2 bits (892), Expect = 9.7e-95 Identity = 172/328 (52.44%), Postives = 236/328 (71.95%), Query Frame = 1
BLAST of Cp4.1LG01g20580.1 vs. Swiss-Prot
Match: MEL26_CAEEL (Protein maternal effect lethal 26 OS=Caenorhabditis elegans GN=mel-26 PE=1 SV=2) HSP 1 Score: 90.9 bits (224), Expect = 2.8e-17 Identity = 53/146 (36.30%), Postives = 79/146 (54.11%), Query Frame = 1
BLAST of Cp4.1LG01g20580.1 vs. Swiss-Prot
Match: RDX_DROME (Protein roadkill OS=Drosophila melanogaster GN=rdx PE=1 SV=2) HSP 1 Score: 74.3 bits (181), Expect = 2.7e-12 Identity = 46/137 (33.58%), Postives = 75/137 (54.74%), Query Frame = 1
BLAST of Cp4.1LG01g20580.1 vs. Swiss-Prot
Match: TDPZ2_MOUSE (TD and POZ domain-containing protein 2 OS=Mus musculus GN=Tdpoz2 PE=2 SV=2) HSP 1 Score: 73.2 bits (178), Expect = 6.0e-12 Identity = 42/139 (30.22%), Postives = 75/139 (53.96%), Query Frame = 1
BLAST of Cp4.1LG01g20580.1 vs. TrEMBL
Match: A0A0A0KH49_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G385060 PE=4 SV=1) HSP 1 Score: 596.3 bits (1536), Expect = 2.3e-167 Identity = 287/329 (87.23%), Postives = 312/329 (94.83%), Query Frame = 1
BLAST of Cp4.1LG01g20580.1 vs. TrEMBL
Match: B9RJ33_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1030620 PE=4 SV=1) HSP 1 Score: 570.1 bits (1468), Expect = 1.7e-159 Identity = 264/326 (80.98%), Postives = 305/326 (93.56%), Query Frame = 1
BLAST of Cp4.1LG01g20580.1 vs. TrEMBL
Match: B9H7F4_POPTR (BTB/POZ domain-containing family protein OS=Populus trichocarpa GN=POPTR_0005s20070g PE=4 SV=2) HSP 1 Score: 567.8 bits (1462), Expect = 8.7e-159 Identity = 266/327 (81.35%), Postives = 306/327 (93.58%), Query Frame = 1
BLAST of Cp4.1LG01g20580.1 vs. TrEMBL
Match: A0A067KCT6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12100 PE=4 SV=1) HSP 1 Score: 567.8 bits (1462), Expect = 8.7e-159 Identity = 264/326 (80.98%), Postives = 305/326 (93.56%), Query Frame = 1
BLAST of Cp4.1LG01g20580.1 vs. TrEMBL
Match: E0CR58_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g02680 PE=4 SV=1) HSP 1 Score: 558.5 bits (1438), Expect = 5.3e-156 Identity = 259/325 (79.69%), Postives = 301/325 (92.62%), Query Frame = 1
BLAST of Cp4.1LG01g20580.1 vs. TAIR10
Match: AT1G21780.1 (AT1G21780.1 BTB/POZ domain-containing protein) HSP 1 Score: 518.1 bits (1333), Expect = 4.0e-147 Identity = 237/326 (72.70%), Postives = 291/326 (89.26%), Query Frame = 1
BLAST of Cp4.1LG01g20580.1 vs. TAIR10
Match: AT1G55760.1 (AT1G55760.1 BTB/POZ domain-containing protein) HSP 1 Score: 348.2 bits (892), Expect = 5.5e-96 Identity = 172/328 (52.44%), Postives = 236/328 (71.95%), Query Frame = 1
BLAST of Cp4.1LG01g20580.1 vs. TAIR10
Match: AT2G39760.1 (AT2G39760.1 BTB/POZ/MATH-domains containing protein) HSP 1 Score: 68.6 bits (166), Expect = 8.4e-12 Identity = 47/150 (31.33%), Postives = 69/150 (46.00%), Query Frame = 1
BLAST of Cp4.1LG01g20580.1 vs. TAIR10
Match: AT2G40450.1 (AT2G40450.1 BTB/POZ domain-containing protein) HSP 1 Score: 59.7 bits (143), Expect = 3.9e-09 Identity = 41/144 (28.47%), Postives = 68/144 (47.22%), Query Frame = 1
BLAST of Cp4.1LG01g20580.1 vs. TAIR10
Match: AT1G01640.1 (AT1G01640.1 BTB/POZ domain-containing protein) HSP 1 Score: 59.3 bits (142), Expect = 5.1e-09 Identity = 39/118 (33.05%), Postives = 65/118 (55.08%), Query Frame = 1
BLAST of Cp4.1LG01g20580.1 vs. NCBI nr
Match: gi|778715675|ref|XP_011657433.1| (PREDICTED: BTB/POZ domain-containing protein At1g21780 [Cucumis sativus]) HSP 1 Score: 596.3 bits (1536), Expect = 3.3e-167 Identity = 287/329 (87.23%), Postives = 312/329 (94.83%), Query Frame = 1
BLAST of Cp4.1LG01g20580.1 vs. NCBI nr
Match: gi|659133411|ref|XP_008466717.1| (PREDICTED: BTB/POZ domain-containing protein At1g21780 [Cucumis melo]) HSP 1 Score: 594.7 bits (1532), Expect = 9.5e-167 Identity = 286/329 (86.93%), Postives = 309/329 (93.92%), Query Frame = 1
BLAST of Cp4.1LG01g20580.1 vs. NCBI nr
Match: gi|255545384|ref|XP_002513752.1| (PREDICTED: BTB/POZ domain-containing protein At1g21780 [Ricinus communis]) HSP 1 Score: 570.1 bits (1468), Expect = 2.5e-159 Identity = 264/326 (80.98%), Postives = 305/326 (93.56%), Query Frame = 1
BLAST of Cp4.1LG01g20580.1 vs. NCBI nr
Match: gi|802636219|ref|XP_012078254.1| (PREDICTED: BTB/POZ domain-containing protein At1g21780 isoform X2 [Jatropha curcas]) HSP 1 Score: 567.8 bits (1462), Expect = 1.2e-158 Identity = 264/326 (80.98%), Postives = 305/326 (93.56%), Query Frame = 1
BLAST of Cp4.1LG01g20580.1 vs. NCBI nr
Match: gi|566172293|ref|XP_002307437.2| (BTB/POZ domain-containing family protein [Populus trichocarpa]) HSP 1 Score: 567.8 bits (1462), Expect = 1.2e-158 Identity = 266/327 (81.35%), Postives = 306/327 (93.58%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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