Cp4.1LG01g18050.1 (mRNA) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g18050.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Copper-binding periplasmic protein
Location	Cp4.1LG01 : 15273792 .. 15274529 (-)
Sequence length	738

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGATTGAAGTTTGCTCTGAGATTTCCACTCTAGGAATCAGTCCGAGAATCTCGTTTTCGCATGATCTGAACCAGGCCGATTCGTTGCCTTCTTCTTCCGATTGCAACCGCGGTCGCTTGGATTTAACTCTTCCGGAATCCGATTTCGATTTCTGCATTGGCAATCTTCTTATGCAAGATCTCTCCTCTGCGGATCAGCTTTTCTGCAATGGAAAAATTCTCCCCGTCGAAATCAAGAAATCGATCGTTTCTAAACCTAACGAATCGACTCCTCCAATTCCGACAACTTCAGTCTCCTCCGAGAAGAAGAGCCTGAAAGAACTTCTATCCGCGAGTTTCGATGCGGAGGAGAAACCGCAATCCAAATCGTCGTTCTGGCAGTTCAAGCGAAGCAGTAGTCTCAATTGCGAAACCTCCAAGAGTAGAGGTTTCATACGATCCTTGCATTTTCTCTCCAGAAGCAACTCCACTGGTTCGGCTTTGAATTTGCAGAAACAGCCTTCGATTTCGAGTACAAAATCGTCGGTATCTTCTTGCTCCAACTCGTATTTCGCAAATTCCTGCTCTCAGAAGACTTCGACGAGGACGAATTTCGGGGCGAACAGTGGAAATGGAGTTCGAATAATGAGTCCTCTTCTCAACCTCCCTCCGCCATACATTTCCAAAGTAACTGTGAGTTTTTTTGGATTCGGTTCTCTGTTTTGCAATGGAAAGAACAAAAAGAAGAACAAATAA

mRNA sequence

ATGGCGATTGAAGTTTGCTCTGAGATTTCCACTCTAGGAATCAGTCCGAGAATCTCGTTTTCGCATGATCTGAACCAGGCCGATTCGTTGCCTTCTTCTTCCGATTGCAACCGCGGTCGCTTGGATTTAACTCTTCCGGAATCCGATTTCGATTTCTGCATTGGCAATCTTCTTATGCAAGATCTCTCCTCTGCGGATCAGCTTTTCTGCAATGGAAAAATTCTCCCCGTCGAAATCAAGAAATCGATCGTTTCTAAACCTAACGAATCGACTCCTCCAATTCCGACAACTTCAGTCTCCTCCGAGAAGAAGAGCCTGAAAGAACTTCTATCCGCGAGTTTCGATGCGGAGGAGAAACCGCAATCCAAATCGTCGTTCTGGCAGTTCAAGCGAAGCAGTAGTCTCAATTGCGAAACCTCCAAGAGTAGAGGTTTCATACGATCCTTGCATTTTCTCTCCAGAAGCAACTCCACTGGTTCGGCTTTGAATTTGCAGAAACAGCCTTCGATTTCGAGTACAAAATCGTCGGTATCTTCTTGCTCCAACTCGTATTTCGCAAATTCCTGCTCTCAGAAGACTTCGACGAGGACGAATTTCGGGGCGAACAGTGGAAATGGAGTTCGAATAATGAGTCCTCTTCTCAACCTCCCTCCGCCATACATTTCCAAAGTAACTGTGAGTTTTTTTGGATTCGGTTCTCTGTTTTGCAATGGAAAGAACAAAAAGAAGAACAAATAA

Coding sequence (CDS)

ATGGCGATTGAAGTTTGCTCTGAGATTTCCACTCTAGGAATCAGTCCGAGAATCTCGTTTTCGCATGATCTGAACCAGGCCGATTCGTTGCCTTCTTCTTCCGATTGCAACCGCGGTCGCTTGGATTTAACTCTTCCGGAATCCGATTTCGATTTCTGCATTGGCAATCTTCTTATGCAAGATCTCTCCTCTGCGGATCAGCTTTTCTGCAATGGAAAAATTCTCCCCGTCGAAATCAAGAAATCGATCGTTTCTAAACCTAACGAATCGACTCCTCCAATTCCGACAACTTCAGTCTCCTCCGAGAAGAAGAGCCTGAAAGAACTTCTATCCGCGAGTTTCGATGCGGAGGAGAAACCGCAATCCAAATCGTCGTTCTGGCAGTTCAAGCGAAGCAGTAGTCTCAATTGCGAAACCTCCAAGAGTAGAGGTTTCATACGATCCTTGCATTTTCTCTCCAGAAGCAACTCCACTGGTTCGGCTTTGAATTTGCAGAAACAGCCTTCGATTTCGAGTACAAAATCGTCGGTATCTTCTTGCTCCAACTCGTATTTCGCAAATTCCTGCTCTCAGAAGACTTCGACGAGGACGAATTTCGGGGCGAACAGTGGAAATGGAGTTCGAATAATGAGTCCTCTTCTCAACCTCCCTCCGCCATACATTTCCAAAGTAACTGTGAGTTTTTTTGGATTCGGTTCTCTGTTTTGCAATGGAAAGAACAAAAAGAAGAACAAATAA

Protein sequence

MAIEVCSEISTLGISPRISFSHDLNQADSLPSSSDCNRGRLDLTLPESDFDFCIGNLLMQDLSSADQLFCNGKILPVEIKKSIVSKPNESTPPIPTTSVSSEKKSLKELLSASFDAEEKPQSKSSFWQFKRSSSLNCETSKSRGFIRSLHFLSRSNSTGSALNLQKQPSISSTKSSVSSCSNSYFANSCSQKTSTRTNFGANSGNGVRIMSPLLNLPPPYISKVTVSFFGFGSLFCNGKNKKKNK

Homology

[Close]

BLAST of Cp4.1LG01g18050.1 vs. TrEMBL
Match: A0A0A0KAS8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G027440 PE=4 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 1.3e-87
Identity = 198/274 (72.26%), Postives = 216/274 (78.83%), Query Frame = 1


Query: 1   MAIEVCSEISTLGISPRISFSHDLNQADSLPSSS-DCNRGRLDLTLPESDFDFCIGNLLM 60
           MAI+VCSEIST+GISPRISFSHDLNQ D LPSS+ D +R RLDL+L ESDFDFCIGNLL+
Sbjct: 3   MAIDVCSEISTVGISPRISFSHDLNQTDLLPSSNCDRDRDRLDLSLLESDFDFCIGNLLL 62

Query: 61  QDLSSADQLFCNGKILPVEIK--KSIVSKPNES---TPPIPT----TSVSSEKKSLKELL 120
           QDLSSAD+LF NGKILP  I+  + ++SKPN+S    PPIP      SVSSEKKSLKELL
Sbjct: 63  QDLSSADELFSNGKILPKSIQPNRQLLSKPNKSHRLIPPIPPDPSRNSVSSEKKSLKELL 122

Query: 121 SASFDAEEKPQSKSSFWQFKRSSSLNCETSKSRGFIRSLHFLSRSNSTGSALN------- 180
           SASFD +EKPQSKS FWQFKRSSSLNCE+SKSRG IRSLHFLSRSNSTGS LN       
Sbjct: 123 SASFDGDEKPQSKS-FWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSVLNPKQQSNS 182

Query: 181 -------LQKQPSISSTK-----SSVSSCSNSYFANSCSQKTSTRTNFGANSGNGVRIMS 240
                  LQKQ S SS++     SS SS SNSYFAN+CSQK S R NFG N+GNGV   S
Sbjct: 183 KDCQRPNLQKQGSSSSSRRSSSSSSSSSFSNSYFANTCSQKPSMRKNFGWNNGNGVGSSS 242

Query: 241 PLLNLPPPYISKVTVSFFGFGSLFCNGKNKKKNK 246
           PLLNLPPPYISKVTVSFFGFGSLFCNGK KKK K
Sbjct: 243 PLLNLPPPYISKVTVSFFGFGSLFCNGKTKKKKK 275

[Close]

BLAST of Cp4.1LG01g18050.1 vs. TrEMBL
Match: A0A061E523_THECC (Copper-binding periplasmic protein OS=Theobroma cacao GN=TCM_009634 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 7.9e-64
Identity = 160/270 (59.26%), Postives = 190/270 (70.37%), Query Frame = 1


Query: 1   MAIEVCSEISTLGISPRISFSHDLNQADSLPSSSDCNRGRLDLTLPES--DFDFCIGNLL 60
           MAIEVCSEIS+ GISPRISFSHDLNQ D   S  + ++ RLD +L +S  DFDFC GN  
Sbjct: 1   MAIEVCSEISSAGISPRISFSHDLNQKDDAESIEEHHQQRLDTSLLDSGSDFDFCFGNSF 60

Query: 61  MQDLSSADQLFCNGKILPVEIKKSIV---------SKPNESTPPIPTTSVSSEKKSLKEL 120
           +Q+L SAD+LF NGKILP+EIKK  +         S+P  S PP  TT+ +S KK LKE 
Sbjct: 61  VQELPSADELFSNGKILPIEIKKKPLLVAKHVHRQSQPVPS-PPRQTTTDNSGKKRLKEF 120

Query: 121 LSASFDAEEKPQSKSSFWQFKRSSSLNCETSKSRGFIRSLHFLSRSNSTGSALN------ 180
           LS S DA++KP SKS FWQFKRSSSLNCE+++S+  IRSL FLSRSNSTGSA N      
Sbjct: 121 LSMSIDADDKPASKS-FWQFKRSSSLNCESTRSKSLIRSLQFLSRSNSTGSAPNPKSTML 180

Query: 181 --------LQKQPSISSTKSSVSSCSNSYFANSCSQKTSTRTNFGANSGNGVRIMSPLLN 240
                   LQKQPS+ S KSSVSS S +++  S +QK   + N GA  GNGVR+ SP+LN
Sbjct: 181 SKETQKQHLQKQPSL-SRKSSVSSSSGAFYTYSSTQKPPLKKNCGA-YGNGVRV-SPVLN 240

Query: 241 LPPPYISKVTVSFFGFGSLFCNGKNKKKNK 246
           LP P+IS  TVSFFGFGSLFCNGK KKK +
Sbjct: 241 LPQPFISNATVSFFGFGSLFCNGKVKKKKR 265

[Close]

BLAST of Cp4.1LG01g18050.1 vs. TrEMBL
Match: B9HJ45_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s12150g PE=4 SV=2)

HSP 1 Score: 247.3 bits (630), Expect = 2.0e-62
Identity = 155/266 (58.27%), Postives = 183/266 (68.80%), Query Frame = 1


Query: 1   MAIEVCSEISTLGISPRISFSHDLNQADSLPSSSDCNRGRLDLTLPESDFDFCIGNLLMQ 60
           MAI+VCSEIS+ GISPRISFSHDLNQ     S  D    RLD +L +SDFDFC GN  +Q
Sbjct: 1   MAIDVCSEISSAGISPRISFSHDLNQTTDAVSIEDHYHRRLDSSLLDSDFDFCFGNSFVQ 60

Query: 61  DLSSADQLFCNGKILPVEIKKSIVSKPNES------TPPIPTTSVSSEKKSLKELLSASF 120
           +LSSAD+LF NGKILPVEIKK I+S  +        + P   +S ++EKK LKE LS S 
Sbjct: 61  ELSSADELFSNGKILPVEIKKHIISSKDTDQLKSLISQPQRNSSETTEKKQLKEFLSMSL 120

Query: 121 DAEEKPQSKSSFWQFKRSSSLNCETSKSRGFIRSLHFLSRSNSTGSALN----------- 180
           DA+EKP SK SFWQFKRS+SLNC++++S+G IRSLHFLSRSNSTGSA N           
Sbjct: 121 DADEKPASK-SFWQFKRSNSLNCDSTRSKGLIRSLHFLSRSNSTGSAPNPPKQGMLSKET 180

Query: 181 ----LQKQPSISSTKSSVSSCSNSYFANSCSQKTSTRTNFGANSGNGVRIMSPLLNLPPP 240
               LQKQ S+ S KSSV S +  Y  NS  QK       G + GNGVRI SP+LN+PPP
Sbjct: 181 QKPQLQKQASVPSRKSSVPSSAAFYSYNS-QQKPPLLRKCG-SYGNGVRI-SPVLNIPPP 240

Query: 241 YISKVTVSFFGFGSLFCNGKNKKKNK 246
           YIS+ TV+ FG GSLFCNGK KKK +
Sbjct: 241 YISRGTVNLFGLGSLFCNGKVKKKKR 262

[Close]

BLAST of Cp4.1LG01g18050.1 vs. TrEMBL
Match: B9HWG2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s13270g PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 4.8e-61
Identity = 155/266 (58.27%), Postives = 186/266 (69.92%), Query Frame = 1


Query: 1   MAIEVCSEISTLGISPRISFSHDLNQADSLPSSSDCNRGRLDLTLPESDFDFCIGNLLMQ 60
           MAI+VCSEIS+ GISPRISFSHDLNQ     S  D +  RLD +L +SDFDFCIGN  +Q
Sbjct: 1   MAIDVCSEISSAGISPRISFSHDLNQTTDAVSIEDHHHRRLDSSLLDSDFDFCIGNSFVQ 60

Query: 61  DLSSADQLFCNGKILPVEIKK-SIVSKPNE-------STPPIPTTSVSSEKKSLKELLSA 120
           +LSSAD+LF NGKILPVEIKK SI SK N        S P   T++ ++EKK LKE LS 
Sbjct: 61  ELSSADELFSNGKILPVEIKKHSISSKGNNHQPKSLTSQPQHQTSTGTTEKKQLKEFLSE 120

Query: 121 SFDAEEKPQSKSSFWQFKRSSSLNCETSKSRGFIRSLHFLSRSNSTGSALN--------- 180
           S DA+EKP SK SFWQFKRSSSLNC++++S+G IRSLHFLSRSNSTGSA N         
Sbjct: 121 SLDADEKPASK-SFWQFKRSSSLNCDSTRSKGLIRSLHFLSRSNSTGSAPNPPKQAMLSK 180

Query: 181 ------LQKQPSISSTKSSVSSCSNSYFANSCSQKTSTRTNFGANSGNGVRIMSPLLNLP 240
                 LQKQ S+ S K SV S S ++++ +  QK       G++ GNG RI SP+LN+P
Sbjct: 181 ETQKPKLQKQASVPSRKPSVPS-SAAFYSYNPQQKPPLLRKCGSH-GNGFRI-SPVLNIP 240

Query: 241 PPYISKVTVSFFGFGSLFCNGKNKKK 244
           PPYIS+  V+ FG GSLFCNGK K+K
Sbjct: 241 PPYISRGAVNPFGLGSLFCNGKVKRK 262

[Close]

BLAST of Cp4.1LG01g18050.1 vs. TrEMBL
Match: A0A067JZY0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18358 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 1.4e-60
Identity = 147/269 (54.65%), Postives = 183/269 (68.03%), Query Frame = 1


Query: 1   MAIEVCSEISTLGISPRISFSHDLNQADSLPSSSDCNRGRLDLTLPESDFDFCIGNLLMQ 60
           MAI+VCSEIS+ GISPRISFSHDLNQ     S  DC+R RLD +L +SDFDFCI    +Q
Sbjct: 1   MAIDVCSEISSAGISPRISFSHDLNQTTDSVSIEDCHR-RLDASLLDSDFDFCISTSFVQ 60

Query: 61  DLSSADQLFCNGKILPVEIKKSIVSKPNESTPPIP-------TTSVSSEKKSLKELLSAS 120
           +LSSAD+LF NGKILP++IKK  +    E+  P P       T+S ++EKK LKE LS S
Sbjct: 61  ELSSADELFSNGKILPIDIKKQFLVSSKETDHPKPVASRPLRTSSDTTEKKLLKEFLSMS 120

Query: 121 FDAEEKPQSKSSFWQFKRSSSLNCETSKSRGFIRSLHFLSRSNSTGSALN---------- 180
            D +EKP SKS FWQFKRS+SLNC++ KS+G IRSL FLSRSNSTGSA N          
Sbjct: 121 IDGDEKPASKS-FWQFKRSNSLNCDSYKSKGLIRSLQFLSRSNSTGSAPNPPKQAMLFSN 180

Query: 181 -------LQKQPSISSTKSSVSSCSNSYFANSCSQKTSTRTNFGANSGNGVRIMSPLLNL 240
                  LQKQ S+ S KS  ++   ++++ S  Q+  T    G+  GNG+RI SP+LN+
Sbjct: 181 KENPKPKLQKQHSVPSRKSPAAASYGAFYSYSSGQRPPTLRKCGSY-GNGIRI-SPVLNI 240

Query: 241 PPPYISKVTVSFFGFGSLFCNGKNKKKNK 246
           PPPYIS+ TV+ FG GSL CNGK+KKK +
Sbjct: 241 PPPYISRGTVNLFGLGSLLCNGKDKKKKR 265

[Close]

BLAST of Cp4.1LG01g18050.1 vs. TAIR10
Match: AT1G68330.1 (AT1G68330.1 unknown protein)

HSP 1 Score: 135.2 bits (339), Expect = 5.5e-32
Identity = 122/283 (43.11%), Postives = 155/283 (54.77%), Query Frame = 1


Query: 1   MAIEVC-SEISTLGISPRISFSHDLNQADSLPSSSDCNRGRLDLTLPE--SDFDFCIG-N 60
           MAI+VC SE S  GISPRISFS+DL+       S+D    RLD TL +  S+FDFC G +
Sbjct: 1   MAIDVCCSEASGSGISPRISFSYDLD-------STDDGEVRLDSTLLDSGSEFDFCFGSS 60

Query: 61  LLMQDLSSADQLFCNGKILPVEIKK----------------SIVSKPNESTPPIPTTSVS 120
             +Q++S AD+LF  GKILPV+IKK                S+ S  + S+    ++   
Sbjct: 61  CSVQEVSPADELFSEGKILPVQIKKEESLPQTVTFRVPRSASLSSSSSSSSSSSSSSRAP 120

Query: 121 SEKKSLKE-LLSASFDAEEKPQSKSSFWQFKRSSSLNCETSK-SRGFIRSLHFLSRSNST 180
            +K  LKE LL+   D E+KP  +  F QFKRS SLN + S+ S+G IRS HFLSRSNST
Sbjct: 121 EKKMRLKELLLNPESDFEDKP--RGLFLQFKRSISLNYDKSRNSKGLIRSFHFLSRSNST 180

Query: 181 GS---------------ALNLQKQPSISSTKSSVSSCSNSYFANSCSQKTSTRTNFGANS 240
            +                 NL K        SS+SS S  ++    S+K   R +FG N 
Sbjct: 181 PNPNLDLLPKETHHPHKTHNLPKHKPPLRRSSSLSSSSVPFY----SKKPLGRNSFG-NG 240

Query: 241 GNGVRIMSPLLNLPPP-YISKVTVSFFGFGSLFCNGKNKKKNK 246
             GVR+ SP+LN PPP +IS V   FF  GSL CNGK   K K
Sbjct: 241 NGGVRV-SPVLNFPPPAFISNVADGFFSIGSL-CNGKTNTKTK 267

[Close]

BLAST of Cp4.1LG01g18050.1 vs. TAIR10
Match: AT1G67050.1 (AT1G67050.1 unknown protein)

HSP 1 Score: 114.4 bits (285), Expect = 1.0e-25
Identity = 105/280 (37.50%), Postives = 150/280 (53.57%), Query Frame = 1


Query: 1   MAIEVCSEISTLGISPRISFSHDLNQADSLP------SSSDCNRGRLDLTLPESDFDFCI 60
           MA+++ SE S +  SPRISFS D  Q+D++P       SS+     L+ ++   DFDFCI
Sbjct: 1   MAVDLLSENSNM--SPRISFSRDFCQSDAIPIEKRPLRSSNSKPSSLNSSI---DFDFCI 60

Query: 61  ------GNLLMQDLSSADQLFCNGKILPVEIKKSIVSKPNESTP-PIPTTSVSSEKKSLK 120
                 G    Q   SAD+LF NGKILP EIKK    +P +  P P P  S    +K  K
Sbjct: 61  PGGVNSGESFDQGSWSADELFSNGKILPTEIKKK--PEPGKKEPEPKPVKSKPDSRKQRK 120

Query: 121 ELLSASFD------AEEKPQSKSSFWQFKRSSSLNCETSKSRGFIRSLHFLSRSNSTGSA 180
           +      +       EEK  +KS FW FKRSSSLNC ++  R     L  L+RSNSTGS 
Sbjct: 121 QPNEEQQEDDVIITTEEKTNTKS-FWGFKRSSSLNCGSTYGRSLC-PLPLLNRSNSTGST 180

Query: 181 ---------------LNLQKQPSISSTKSSVSSCSNSYFANSCSQKTSTRTNFGANSGNG 240
                          + LQ+  S+SS+ S+ SS SN+ F+    +K+    ++G++ G G
Sbjct: 181 SSKQKQSSSRKHNEHVKLQQSSSLSSSSSASSSLSNNGFSKPPLKKSYGGYSYGSHGGGG 240

Query: 241 VRIMSPLLNLPPPYISKVTVSFFGFGSLFC-NGKNKKKNK 246
           +R+ SP++N+ P      + + FGFGS+F  NG++K K +
Sbjct: 241 IRV-SPVINVVP------SGNLFGFGSMFSGNGRDKNKKR 264

[Close]

BLAST of Cp4.1LG01g18050.1 vs. TAIR10
Match: AT1G48780.1 (AT1G48780.1 unknown protein)

HSP 1 Score: 77.4 bits (189), Expect = 1.4e-14
Identity = 91/255 (35.69%), Postives = 118/255 (46.27%), Query Frame = 1


Query: 17  RISFSHDLNQADSLPS-----SSDCNRGRLDLTLPESDFDFCIGNLLMQ-DLSSADQLFC 76
           RISFS DL Q+D  P      S    R    L    SDF+F I N     D S AD++F 
Sbjct: 9   RISFSSDLGQSDKAPPPVIEPSGLIRRDETLLDSSNSDFEFHISNSFDPGDSSPADEIFA 68

Query: 77  NGKILPVEIKK-SIVSK---------------PNESTP-PIPTTSVSSEKKSLKELLSAS 136
           +G ILP  +   S V K               P+  +P P+PT    SEK++      A+
Sbjct: 69  DGMILPFHVTAASTVPKRLYKYELPPITSSLSPSPLSPQPLPTKH--SEKETNGRASGAN 128

Query: 137 FDAEEKPQSKSSFWQFKRSSSLNCETSKSRGFIRSLHFLSRSNSTGSALNLQK---QPSI 196
            D+E +  SKS FW FKRSSSLNC+  KS   I S   L+RSNSTGS  N ++   +   
Sbjct: 129 SDSEAEKSSKS-FWSFKRSSSLNCDIKKS--LICSFPRLTRSNSTGSVTNSKRAMLRDVN 188

Query: 197 SSTKSSVSSCSNSYFANSCSQKTSTRTNFGANSGNGVRIMSPLLNLPPPYISKVTVSFFG 246
           +   SS SSC N+Y      Q    +       G G   + P+LN P         S FG
Sbjct: 189 NHRPSSRSSCCNAY------QFRPQKHTGKKGEGGGSFSVIPVLNGP---------STFG 243

[Close]

BLAST of Cp4.1LG01g18050.1 vs. TAIR10
Match: AT3G18300.1 (AT3G18300.1 unknown protein)

HSP 1 Score: 55.5 bits (132), Expect = 5.5e-08
Identity = 84/275 (30.55%), Postives = 113/275 (41.09%), Query Frame = 1


Query: 17  RISFSHDLNQADSLPSSSDCNRG--RLDLTLPES---DFDFCIG-NLLMQDLSSADQLFC 76
           R SF+ DL Q+D          G  R D TL +S   DF+F I  N    D S AD++F 
Sbjct: 10  RFSFAGDLGQSDKGTPMEQQPSGPVRRDTTLLDSSNSDFEFHISSNFDPGDSSPADEIFA 69

Query: 77  NGKILPV---EIKKS--------------IVSKPNEST--PPIPTT--------SVSSEK 136
           +G ILPV   ++  +              IVS P  S+  PP+P          SV   +
Sbjct: 70  DGMILPVLPFQVTATSTMPKRLYKYELPPIVSAPTLSSYLPPLPLPLPEHSRKYSVKETR 129

Query: 137 KSLKELLSASFDAEEKPQSKSSFWQFKRSSSLNCETSKSRGFIRSLHFLSRSNSTGSALN 196
            SL    S +    E  +S  SFW FKRSSSLNC+  KS   I S   L+RSNSTGS   
Sbjct: 130 GSLNGRGSGANSDSEAEKSSKSFWSFKRSSSLNCDIKKS--LICSFPRLTRSNSTGSVAI 189

Query: 197 LQKQ---------------PSISSTKSSVSSCSNSYFANSCSQKTSTRTNFGANSGNGVR 244
            +++               P      SS     +S+  +S   +             G  
Sbjct: 190 SKREMLRDINKHSSQRHGVPRPGVNPSSHMRPPSSFCCSSYQFRPQKHAGKNGGGRGGSF 249

[Close]

BLAST of Cp4.1LG01g18050.1 vs. NCBI nr
Match: gi|449467567|ref|XP_004151494.1| (PREDICTED: uncharacterized protein LOC101215559 [Cucumis sativus])

HSP 1 Score: 330.9 bits (847), Expect = 1.9e-87
Identity = 198/274 (72.26%), Postives = 216/274 (78.83%), Query Frame = 1


Query: 1   MAIEVCSEISTLGISPRISFSHDLNQADSLPSSS-DCNRGRLDLTLPESDFDFCIGNLLM 60
           MAI+VCSEIST+GISPRISFSHDLNQ D LPSS+ D +R RLDL+L ESDFDFCIGNLL+
Sbjct: 3   MAIDVCSEISTVGISPRISFSHDLNQTDLLPSSNCDRDRDRLDLSLLESDFDFCIGNLLL 62

Query: 61  QDLSSADQLFCNGKILPVEIK--KSIVSKPNES---TPPIPT----TSVSSEKKSLKELL 120
           QDLSSAD+LF NGKILP  I+  + ++SKPN+S    PPIP      SVSSEKKSLKELL
Sbjct: 63  QDLSSADELFSNGKILPKSIQPNRQLLSKPNKSHRLIPPIPPDPSRNSVSSEKKSLKELL 122

Query: 121 SASFDAEEKPQSKSSFWQFKRSSSLNCETSKSRGFIRSLHFLSRSNSTGSALN------- 180
           SASFD +EKPQSKS FWQFKRSSSLNCE+SKSRG IRSLHFLSRSNSTGS LN       
Sbjct: 123 SASFDGDEKPQSKS-FWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSVLNPKQQSNS 182

Query: 181 -------LQKQPSISSTK-----SSVSSCSNSYFANSCSQKTSTRTNFGANSGNGVRIMS 240
                  LQKQ S SS++     SS SS SNSYFAN+CSQK S R NFG N+GNGV   S
Sbjct: 183 KDCQRPNLQKQGSSSSSRRSSSSSSSSSFSNSYFANTCSQKPSMRKNFGWNNGNGVGSSS 242

Query: 241 PLLNLPPPYISKVTVSFFGFGSLFCNGKNKKKNK 246
           PLLNLPPPYISKVTVSFFGFGSLFCNGK KKK K
Sbjct: 243 PLLNLPPPYISKVTVSFFGFGSLFCNGKTKKKKK 275

[Close]

BLAST of Cp4.1LG01g18050.1 vs. NCBI nr
Match: gi|659089671|ref|XP_008445637.1| (PREDICTED: uncharacterized protein DDB_G0271670-like [Cucumis melo])

HSP 1 Score: 326.6 bits (836), Expect = 3.6e-86
Identity = 198/276 (71.74%), Postives = 216/276 (78.26%), Query Frame = 1


Query: 1   MAIEVCSEISTLGISPRISFSHDLNQADSLPSSS-DCNRGRLDLTLPESDFDFCIGNLLM 60
           MAI+VCSEIST+GISPRISFSHDLNQ D LPSS+ D +R RLDL+L ESDFDFCIGNLL+
Sbjct: 3   MAIDVCSEISTVGISPRISFSHDLNQTDLLPSSNCDRDRDRLDLSLLESDFDFCIGNLLL 62

Query: 61  QDLSSADQLFCNGKILP--VEIKKSIVSKPNES---TPPIPT----TSVSSEKKSLKELL 120
           QDLSSAD+LF NGKILP  +E  + ++SKPN+S    PPIP      SVSSEKKSLKELL
Sbjct: 63  QDLSSADELFSNGKILPKSIEPNRQVLSKPNQSHRLIPPIPPDPSRNSVSSEKKSLKELL 122

Query: 121 SASFDAEEKPQSKSSFWQFKRSSSLNCETSKSRGFIRSLHFLSRSNSTGSAL-------- 180
           SASFD EEK QSKS FWQFKRSSSLNCE+SKSR  IRSLHFLSRSNSTGS L        
Sbjct: 123 SASFDGEEKQQSKS-FWQFKRSSSLNCESSKSRSLIRSLHFLSRSNSTGSVLNPKQQSNS 182

Query: 181 ------NLQKQPSISSTK------SSVSSCSNSYFANSCSQKTSTRTNFGANSGNGVRI- 240
                 NLQKQ SISS++      SS +S SNSYFAN+CSQK S R NFG N+GNGV I 
Sbjct: 183 KDCQRPNLQKQASISSSRRSSSSSSSSTSFSNSYFANTCSQKHSMRKNFGWNNGNGVGIS 242

Query: 241 MSPLLNLPPPYISKVTVSFFGFGSLFCNGKNKKKNK 246
            SPLLNLPPPYISKVTVSFFGFGSLFCNGK KKK K
Sbjct: 243 SSPLLNLPPPYISKVTVSFFGFGSLFCNGKTKKKKK 277

[Close]

BLAST of Cp4.1LG01g18050.1 vs. NCBI nr
Match: gi|590693258|ref|XP_007044283.1| (Copper-binding periplasmic protein [Theobroma cacao])

HSP 1 Score: 251.9 bits (642), Expect = 1.1e-63
Identity = 160/270 (59.26%), Postives = 190/270 (70.37%), Query Frame = 1


Query: 1   MAIEVCSEISTLGISPRISFSHDLNQADSLPSSSDCNRGRLDLTLPES--DFDFCIGNLL 60
           MAIEVCSEIS+ GISPRISFSHDLNQ D   S  + ++ RLD +L +S  DFDFC GN  
Sbjct: 1   MAIEVCSEISSAGISPRISFSHDLNQKDDAESIEEHHQQRLDTSLLDSGSDFDFCFGNSF 60

Query: 61  MQDLSSADQLFCNGKILPVEIKKSIV---------SKPNESTPPIPTTSVSSEKKSLKEL 120
           +Q+L SAD+LF NGKILP+EIKK  +         S+P  S PP  TT+ +S KK LKE 
Sbjct: 61  VQELPSADELFSNGKILPIEIKKKPLLVAKHVHRQSQPVPS-PPRQTTTDNSGKKRLKEF 120

Query: 121 LSASFDAEEKPQSKSSFWQFKRSSSLNCETSKSRGFIRSLHFLSRSNSTGSALN------ 180
           LS S DA++KP SKS FWQFKRSSSLNCE+++S+  IRSL FLSRSNSTGSA N      
Sbjct: 121 LSMSIDADDKPASKS-FWQFKRSSSLNCESTRSKSLIRSLQFLSRSNSTGSAPNPKSTML 180

Query: 181 --------LQKQPSISSTKSSVSSCSNSYFANSCSQKTSTRTNFGANSGNGVRIMSPLLN 240
                   LQKQPS+ S KSSVSS S +++  S +QK   + N GA  GNGVR+ SP+LN
Sbjct: 181 SKETQKQHLQKQPSL-SRKSSVSSSSGAFYTYSSTQKPPLKKNCGA-YGNGVRV-SPVLN 240

Query: 241 LPPPYISKVTVSFFGFGSLFCNGKNKKKNK 246
           LP P+IS  TVSFFGFGSLFCNGK KKK +
Sbjct: 241 LPQPFISNATVSFFGFGSLFCNGKVKKKKR 265

[Close]

BLAST of Cp4.1LG01g18050.1 vs. NCBI nr
Match: gi|566183564|ref|XP_002311465.2| (hypothetical protein POPTR_0008s12150g [Populus trichocarpa])

HSP 1 Score: 247.3 bits (630), Expect = 2.8e-62
Identity = 155/266 (58.27%), Postives = 183/266 (68.80%), Query Frame = 1


Query: 1   MAIEVCSEISTLGISPRISFSHDLNQADSLPSSSDCNRGRLDLTLPESDFDFCIGNLLMQ 60
           MAI+VCSEIS+ GISPRISFSHDLNQ     S  D    RLD +L +SDFDFC GN  +Q
Sbjct: 1   MAIDVCSEISSAGISPRISFSHDLNQTTDAVSIEDHYHRRLDSSLLDSDFDFCFGNSFVQ 60

Query: 61  DLSSADQLFCNGKILPVEIKKSIVSKPNES------TPPIPTTSVSSEKKSLKELLSASF 120
           +LSSAD+LF NGKILPVEIKK I+S  +        + P   +S ++EKK LKE LS S 
Sbjct: 61  ELSSADELFSNGKILPVEIKKHIISSKDTDQLKSLISQPQRNSSETTEKKQLKEFLSMSL 120

Query: 121 DAEEKPQSKSSFWQFKRSSSLNCETSKSRGFIRSLHFLSRSNSTGSALN----------- 180
           DA+EKP SK SFWQFKRS+SLNC++++S+G IRSLHFLSRSNSTGSA N           
Sbjct: 121 DADEKPASK-SFWQFKRSNSLNCDSTRSKGLIRSLHFLSRSNSTGSAPNPPKQGMLSKET 180

Query: 181 ----LQKQPSISSTKSSVSSCSNSYFANSCSQKTSTRTNFGANSGNGVRIMSPLLNLPPP 240
               LQKQ S+ S KSSV S +  Y  NS  QK       G + GNGVRI SP+LN+PPP
Sbjct: 181 QKPQLQKQASVPSRKSSVPSSAAFYSYNS-QQKPPLLRKCG-SYGNGVRI-SPVLNIPPP 240

Query: 241 YISKVTVSFFGFGSLFCNGKNKKKNK 246
           YIS+ TV+ FG GSLFCNGK KKK +
Sbjct: 241 YISRGTVNLFGLGSLFCNGKVKKKKR 262

[Close]

BLAST of Cp4.1LG01g18050.1 vs. NCBI nr
Match: gi|743784403|ref|XP_011022303.1| (PREDICTED: uncharacterized protein LOC105124123 [Populus euphratica])

HSP 1 Score: 245.4 bits (625), Expect = 1.1e-61
Identity = 153/266 (57.52%), Postives = 182/266 (68.42%), Query Frame = 1


Query: 1   MAIEVCSEISTLGISPRISFSHDLNQADSLPSSSDCNRGRLDLTLPESDFDFCIGNLLMQ 60
           MAI+VCSEIS+ GISPRISFSHD+NQ     S  D    RLD +L +SDFDFC GN  +Q
Sbjct: 1   MAIDVCSEISSAGISPRISFSHDINQTTDAVSIEDHYHRRLDSSLLDSDFDFCFGNRFVQ 60

Query: 61  DLSSADQLFCNGKILPVEIKKSIVSKPNES------TPPIPTTSVSSEKKSLKELLSASF 120
           +LSSAD+LF NGKILPVEIKK I+S  +        + P   +S ++EKK LKE LS S 
Sbjct: 61  ELSSADELFSNGKILPVEIKKHIISSKDTDQLKSLISQPQQNSSETTEKKQLKEFLSMSL 120

Query: 121 DAEEKPQSKSSFWQFKRSSSLNCETSKSRGFIRSLHFLSRSNSTGSALN----------- 180
           DA+EKP SK SFWQFKRS+SLNC++++S+G IRSLHFLSRSNSTGSA N           
Sbjct: 121 DADEKPASK-SFWQFKRSNSLNCDSTRSKGLIRSLHFLSRSNSTGSAPNPPKQAMLSKET 180

Query: 181 ----LQKQPSISSTKSSVSSCSNSYFANSCSQKTSTRTNFGANSGNGVRIMSPLLNLPPP 240
               LQKQ S+ S KSS  S +  Y  NS  QK       G + GNGVRI SP+LN+PPP
Sbjct: 181 QKPQLQKQASVPSRKSSAPSSAAFYSYNS-QQKPPLLRKCG-SYGNGVRI-SPVLNIPPP 240

Query: 241 YISKVTVSFFGFGSLFCNGKNKKKNK 246
           YIS+ TV+ FG GSLFCNGK KKK +
Sbjct: 241 YISRGTVNLFGLGSLFCNGKVKKKKR 262

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g18050.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG01g18050.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KAS8_CUCSA	1.3e-87	72.26	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G027440 PE=4 SV=1	[more]
A0A061E523_THECC	7.9e-64	59.26	Copper-binding periplasmic protein OS=Theobroma cacao GN=TCM_009634 PE=4 SV=1	[more]
B9HJ45_POPTR	2.0e-62	58.27	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s12150g PE=4 SV=2	[more]
B9HWG2_POPTR	4.8e-61	58.27	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s13270g PE=4 SV=1	[more]
A0A067JZY0_JATCU	1.4e-60	54.65	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18358 PE=4 SV=1	[more]

BLAST of Cp4.1LG01g18050.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G68330.1	5.5e-32	43.11	unknown protein	[more]
AT1G67050.1	1.0e-25	37.50	unknown protein	[more]
AT1G48780.1	1.4e-14	35.69	unknown protein	[more]
AT3G18300.1	5.5e-08	30.55	unknown protein	[more]

BLAST of Cp4.1LG01g18050.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449467567\|ref\|XP_004151494.1\|	1.9e-87	72.26	PREDICTED: uncharacterized protein LOC101215559 [Cucumis sativus]	[more]
gi\|659089671\|ref\|XP_008445637.1\|	3.6e-86	71.74	PREDICTED: uncharacterized protein DDB_G0271670-like [Cucumis melo]	[more]
gi\|590693258\|ref\|XP_007044283.1\|	1.1e-63	59.26	Copper-binding periplasmic protein [Theobroma cacao]	[more]
gi\|566183564\|ref\|XP_002311465.2\|	2.8e-62	58.27	hypothetical protein POPTR_0008s12150g [Populus trichocarpa]	[more]
gi\|743784403\|ref\|XP_011022303.1\|	1.1e-61	57.52	PREDICTED: uncharacterized protein LOC105124123 [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG01g18050	Cp4.1LG01g18050	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG01g18050.1:cds:001	Cp4.1LG01g18050.1:cds:001	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG01g18050.1	Cp4.1LG01g18050.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31722	FAMILY NOT NAMED	coord: 1..245 score: 1.8
None	No IPR available	PANTHER	PTHR31722:SF9	SUBFAMILY NOT NAMED	coord: 1..245 score: 1.8