Cp4.1LG01g12390.1 (mRNA) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g12390.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Protein PHYTOCHROME KINASE SUBSTRATE 1
Location	Cp4.1LG01 : 8753054 .. 8754292 (-)
Sequence length	1239

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAGAAGGGTGAGCTTGCCGCCGCCTGTTTGCGATACAAACCTCCCGCACCTTCGTGAAGCCTCTTTCTCTTCCTACTTGAACCATGCAGAGAAAGAATTTGTGCGTAAGCTTGCTGAATCAACTCGAGATCGCTCTAATTCTGTTACTACTCAGGAAGAACAGGATGGAGATATTGAAGTTTTTGGGGCTGAGAAATATTTCAATGCGGGTGCATTTGATACTCAAAAGCCCCTCAAATTCCCTCCCAAGAAGCCTCACAAAAGGATTCTTCACTCCAAGAAGCCAAGAACTAGTACTTCTAGTACTACTACTACTCGATCTGGAAGTCCAAGTGTTCGTTCTCAATCCAGTTGGAATAGCCAAAAGGCACTGTTGCAGAGTAGTACTGTAAACGCTGATTCCATGTCGTCTAAGGCGACAAAGAAGAGCAAATCCTCACAATTGGCGAAGGGGTTTCTCTATAGATGCTATTGCTGCGACAAGAACTTAACCAAATCCAAACCAAACCCCAAACGGAGACAAACAACCAATGCAGGTTCAAATTTCACGTTTGAAAGCTCTGTTCCAGTTGATCTGACGCCTAAAAACTCTGCCTCGGCCCTGAAAATGCAAATTCAAGTTGAAGAACAACAAGGGCAAAAGCCAATTGAGGTGTTTGAATCTTCTCTACCCAGTGTGGACTCTCTGAATGTAAACCACTTGGAGAAGAGGCTTTCGATGATGACATGGAACGACATCGTTCCAAAAGTGAAGGATTCTTCAAATTCTAATTCAAATAAATGCAGCCTAATCTACAACGATGATGCGGGAAGTGATGCAAGTTCGGATCTTTTCGAGATTGAGACGTTAACGGGGAACCCCAATTCGTTTCTCACAACACAACCCTCTGATTGCACGGATTGTGTAACACCCACCACTTGTTATGCACCAAGTGAGGCCAGCATCGAGTGGAGTGTCATCACCGCCAGCGCCACCGATTTCTCCGACGAACACCGCCTCTCCACCACCAGTCACGACGTGAAAGCGAGTCTGAGGCGGCGTTCGAATCATCTGATGGGTTGCAAGAATGAGAAGGCGGTGAGAGTGGCCGGAGATAAGTACGGTTCTCCGGAGGAAATCCAACGAAGATGGGAATCCTTTGGACGACTTACGAGGTTCGAAGCTCAGAGGCTTGCTGCAAATTCTGTTCCTCGTCAGTATTCACCCAAAATCTCCAATATTTTGTATGTTTAA

mRNA sequence

ATGGGAAGAAGGGTGAGCTTGCCGCCGCCTGTTTGCGATACAAACCTCCCGCACCTTCGTGAAGCCTCTTTCTCTTCCTACTTGAACCATGCAGAGAAAGAATTTGTGCGTAAGCTTGCTGAATCAACTCGAGATCGCTCTAATTCTGTTACTACTCAGGAAGAACAGGATGGAGATATTGAAGTTTTTGGGGCTGAGAAATATTTCAATGCGGGTGCATTTGATACTCAAAAGCCCCTCAAATTCCCTCCCAAGAAGCCTCACAAAAGGATTCTTCACTCCAAGAAGCCAAGAACTAGTACTTCTAGTACTACTACTACTCGATCTGGAAGTCCAAGTGTTCGTTCTCAATCCAGTTGGAATAGCCAAAAGGCACTGTTGCAGAGTAGTACTGTAAACGCTGATTCCATGTCGTCTAAGGCGACAAAGAAGAGCAAATCCTCACAATTGGCGAAGGGGTTTCTCTATAGATGCTATTGCTGCGACAAGAACTTAACCAAATCCAAACCAAACCCCAAACGGAGACAAACAACCAATGCAGGTTCAAATTTCACGTTTGAAAGCTCTGTTCCAGTTGATCTGACGCCTAAAAACTCTGCCTCGGCCCTGAAAATGCAAATTCAAGTTGAAGAACAACAAGGGCAAAAGCCAATTGAGGTGTTTGAATCTTCTCTACCCAGTGTGGACTCTCTGAATGTAAACCACTTGGAGAAGAGGCTTTCGATGATGACATGGAACGACATCGTTCCAAAAGTGAAGGATTCTTCAAATTCTAATTCAAATAAATGCAGCCTAATCTACAACGATGATGCGGGAAGTGATGCAAGTTCGGATCTTTTCGAGATTGAGACGTTAACGGGGAACCCCAATTCGTTTCTCACAACACAACCCTCTGATTGCACGGATTGTGTAACACCCACCACTTGTTATGCACCAAGTGAGGCCAGCATCGAGTGGAGTGTCATCACCGCCAGCGCCACCGATTTCTCCGACGAACACCGCCTCTCCACCACCAGTCACGACGTGAAAGCGAGTCTGAGGCGGCGTTCGAATCATCTGATGGGTTGCAAGAATGAGAAGGCGGTGAGAGTGGCCGGAGATAAGTACGGTTCTCCGGAGGAAATCCAACGAAGATGGGAATCCTTTGGACGACTTACGAGGTTCGAAGCTCAGAGGCTTGCTGCAAATTCTGTTCCTCGTCAGTATTCACCCAAAATCTCCAATATTTTGTATGTTTAA

Coding sequence (CDS)

ATGGGAAGAAGGGTGAGCTTGCCGCCGCCTGTTTGCGATACAAACCTCCCGCACCTTCGTGAAGCCTCTTTCTCTTCCTACTTGAACCATGCAGAGAAAGAATTTGTGCGTAAGCTTGCTGAATCAACTCGAGATCGCTCTAATTCTGTTACTACTCAGGAAGAACAGGATGGAGATATTGAAGTTTTTGGGGCTGAGAAATATTTCAATGCGGGTGCATTTGATACTCAAAAGCCCCTCAAATTCCCTCCCAAGAAGCCTCACAAAAGGATTCTTCACTCCAAGAAGCCAAGAACTAGTACTTCTAGTACTACTACTACTCGATCTGGAAGTCCAAGTGTTCGTTCTCAATCCAGTTGGAATAGCCAAAAGGCACTGTTGCAGAGTAGTACTGTAAACGCTGATTCCATGTCGTCTAAGGCGACAAAGAAGAGCAAATCCTCACAATTGGCGAAGGGGTTTCTCTATAGATGCTATTGCTGCGACAAGAACTTAACCAAATCCAAACCAAACCCCAAACGGAGACAAACAACCAATGCAGGTTCAAATTTCACGTTTGAAAGCTCTGTTCCAGTTGATCTGACGCCTAAAAACTCTGCCTCGGCCCTGAAAATGCAAATTCAAGTTGAAGAACAACAAGGGCAAAAGCCAATTGAGGTGTTTGAATCTTCTCTACCCAGTGTGGACTCTCTGAATGTAAACCACTTGGAGAAGAGGCTTTCGATGATGACATGGAACGACATCGTTCCAAAAGTGAAGGATTCTTCAAATTCTAATTCAAATAAATGCAGCCTAATCTACAACGATGATGCGGGAAGTGATGCAAGTTCGGATCTTTTCGAGATTGAGACGTTAACGGGGAACCCCAATTCGTTTCTCACAACACAACCCTCTGATTGCACGGATTGTGTAACACCCACCACTTGTTATGCACCAAGTGAGGCCAGCATCGAGTGGAGTGTCATCACCGCCAGCGCCACCGATTTCTCCGACGAACACCGCCTCTCCACCACCAGTCACGACGTGAAAGCGAGTCTGAGGCGGCGTTCGAATCATCTGATGGGTTGCAAGAATGAGAAGGCGGTGAGAGTGGCCGGAGATAAGTACGGTTCTCCGGAGGAAATCCAACGAAGATGGGAATCCTTTGGACGACTTACGAGGTTCGAAGCTCAGAGGCTTGCTGCAAATTCTGTTCCTCGTCAGTATTCACCCAAAATCTCCAATATTTTGTATGTTTAA

Protein sequence

MGRRVSLPPPVCDTNLPHLREASFSSYLNHAEKEFVRKLAESTRDRSNSVTTQEEQDGDIEVFGAEKYFNAGAFDTQKPLKFPPKKPHKRILHSKKPRTSTSSTTTTRSGSPSVRSQSSWNSQKALLQSSTVNADSMSSKATKKSKSSQLAKGFLYRCYCCDKNLTKSKPNPKRRQTTNAGSNFTFESSVPVDLTPKNSASALKMQIQVEEQQGQKPIEVFESSLPSVDSLNVNHLEKRLSMMTWNDIVPKVKDSSNSNSNKCSLIYNDDAGSDASSDLFEIETLTGNPNSFLTTQPSDCTDCVTPTTCYAPSEASIEWSVITASATDFSDEHRLSTTSHDVKASLRRRSNHLMGCKNEKAVRVAGDKYGSPEEIQRRWESFGRLTRFEAQRLAANSVPRQYSPKISNILYV

Homology

[Close]

BLAST of Cp4.1LG01g12390.1 vs. Swiss-Prot
Match: PKS1_ARATH (Protein PHYTOCHROME KINASE SUBSTRATE 1 OS=Arabidopsis thaliana GN=PKS1 PE=1 SV=2)

HSP 1 Score: 122.1 bits (305), Expect = 1.4e-26
Identity = 133/394 (33.76%), Postives = 186/394 (47.21%), Query Frame = 1


Query: 23  SFSSYLNHAEKEFV--RKLAESTRDRSNSVTTQEEQDGD-------------IEVFGAEK 82
           S SSYL+  E   V  +KL E ++  + S+  ++E+ GD             I VFGAEK
Sbjct: 31  SSSSYLSSKEDALVTTKKLMEPSKTLNMSINPKQEEFGDEKKMVKKAPEDPEIGVFGAEK 90

Query: 83  YFNAGAFDTQ--KPLKFPPKKPHKRILHSKKPRTSTSSTTTTRSGSPSVRSQSSWNSQKA 142
           YFN      Q    L     +  + ++ SK+    ++       G+PSVRS+SSWNSQ  
Sbjct: 91  YFNGDMDSDQGSSVLSLTNPEVERTVVDSKQSAKKST-------GTPSVRSESSWNSQSV 150

Query: 143 LLQSSTVNADSMSSKATKKS-----KSSQLAKGFLY----RCYCCDKNLT--KSKPNPKR 202
           LLQ+  VN+ + S K  K S     K +   K FL     +C C D +    + K + KR
Sbjct: 151 LLQNKLVNSCNSSFKEKKNSNGQIQKVTNNKKSFLANLGCKCACSDGDSVDVEEKTSVKR 210

Query: 203 RQTTNAGSNFTFESSVPVDLTPKNSASALKMQIQVEEQQGQKPIEVFESSLPSVDSLNVN 262
               N  S  T  SS  ++         +K+Q Q EE   +K +EVF S +         
Sbjct: 211 SADPNI-SVITMRSSADMN------TELIKIQKQ-EELSQRKSLEVFGSPVA-------- 270

Query: 263 HLEKRLSMMTWNDIVPKVKDSSNSNSNKCSLIYNDDAGSDASSDLFEIETLTGNPNSFLT 322
            +EK+ S++     +P  K  +  +  K         GSD+SSDLFEIE LTGNP  FLT
Sbjct: 271 -IEKKSSVVQKKLPLPPWKSRTEEDDTKSE-------GSDSSSDLFEIEGLTGNPKPFLT 330

Query: 323 TQPSDCTDCVTPTTCYAPSEASIEWSVITASATDFSDEHRLSTT-------------SHD 368
            Q SD        TCYAPSE S+EWS++TASA DFS     +T+                
Sbjct: 331 RQGSD----PASPTCYAPSEVSVEWSIVTASAADFSVMSECATSPVRRNRPTQIPRIPIT 389

[Close]

BLAST of Cp4.1LG01g12390.1 vs. Swiss-Prot
Match: PKS2_ARATH (Protein PHYTOCHROME KINASE SUBSTRATE 2 OS=Arabidopsis thaliana GN=PKS2 PE=1 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 7.6e-20
Identity = 134/436 (30.73%), Postives = 190/436 (43.58%), Query Frame = 1


Query: 17  PHLREASFSSYLNHAEKEFVRK-LAESTRDRSNSVTTQEEQDGDIEVFGAEKYFNAGAFD 76
           P    ++  SYL   E    +K L     +    +  +  +D +I VFGAEKYFN     
Sbjct: 31  PFSSSSTSFSYLTSKEDALTQKNLMSGITNDVLGINKKASEDLEISVFGAEKYFNGDMDS 90

Query: 77  TQKP-LKFP---PKKPHKRILHSKKPRTSTSSTTTTRSGSPSVRSQSSWNSQKALLQSST 136
              P L  P   P+ P +RI    K  +  SS T      PS+RS+SSWNSQ  LLQS  
Sbjct: 91  DHSPRLVSPLPDPEVPIERIFVGPKQSSKNSSET------PSLRSESSWNSQSLLLQSKY 150

Query: 137 VNA-------DSMSSKATKKSKSSQLA----KGFLYR--CYCCDKNLTKSKPNPKRRQTT 196
           V          S +S   +K  SS       K FL    C C   N +       +R+++
Sbjct: 151 VEKKKNIKKNSSCNSYFQEKDMSSNHKVSNKKSFLATLGCRCVCSNWSSVDVVDDKRRSS 210

Query: 197 NAGSNFTFESSVPVDLTPKNSASALKMQIQVEEQQGQKPIEVFESSLPSVDSLNVNHLEK 256
                 T + S   DL+ +      + +  +E++   K +E+F S L          +EK
Sbjct: 211 GLKKIKT-QLSFSGDLSSEMKIHQQQQEAMLEQR---KSLEIFGSPL----------IEK 270

Query: 257 RL--SMMTWNDIVPKVKDSSNSNSNKCSLIYN---DDAGSDASSDLFEIETLTGNPNSFL 316
           R+      W     +   S+    +  S+ Y    D + SD S+DLFEIE+LTG  N FL
Sbjct: 271 RIIQKKFPW-----EYSSSAKKEEHGFSVKYEEEEDGSVSDVSTDLFEIESLTGKANPFL 330

Query: 317 TTQPSDCTDCVTPTTCYAPSEASIEWSVITASATDFSDEHRLSTT--------------- 376
             Q S   D       YAPSE SI+WSV+TAS  DFS     +T+               
Sbjct: 331 ARQGSSDPDSPDG---YAPSEVSIQWSVVTASVADFSVMSECATSPVKKNRSFQIPRIPI 390

Query: 377 ---SHDVKASLRRRSNH---LMGCKNEKAVRVAGDKYGS----PEEIQRRWESFGRLTRF 405
              S+   A  RR+S+    LMGCK+ K+VRV+GD Y S    P  + R        +  
Sbjct: 391 MAKSNREIAPQRRKSSSSGLLMGCKSHKSVRVSGDSYTSMNRTPSYVPRFPVEANPTSTE 438

[Close]

BLAST of Cp4.1LG01g12390.1 vs. Swiss-Prot
Match: PKS3_ARATH (Protein PHYTOCHROME KINASE SUBSTRATE 3 OS=Arabidopsis thaliana GN=PKS3 PE=2 SV=2)

HSP 1 Score: 71.6 bits (174), Expect = 2.2e-11
Identity = 106/354 (29.94%), Postives = 157/354 (44.35%), Query Frame = 1


Query: 31  AEKEFVRKL--AESTRDRSNSVTTQEEQDGDIEVFGAEKYFNAGAFDTQKPLKFPPKKPH 90
           AEK F  KL   +ST D    +T Q E++            N        P   P   PH
Sbjct: 53  AEKYFSMKLDHVDSTAD----ITKQHEKE------------NTHDHPNANPNPNPNPHPH 112

Query: 91  KRILHSKKPRTSTSSTTTTRSGSPSVRSQSSWNSQKALLQSSTVNADSMSSKATKKSKSS 150
               H +  +T++S + T+R G+PSVRS+SS NSQ  L++ +  N     +K  K + +S
Sbjct: 113 P---HPQLTKTTSSRSKTSRHGTPSVRSESSCNSQTFLMRINNHN----ENKQRKMNDTS 172

Query: 151 QLAKGFLYRCYCCDKNLTKSKPNPKRR-QTTNAGSNFTFESSVPVDLTPKNSASALKMQI 210
               GF  RCY     +     +PK   ++ N+  +F     V  D    N    L  + 
Sbjct: 173 ISFGGF--RCYGPCSGVKTVHTDPKNSCKSRNSDRDF-----VAYDARKHNDKPRLHFEA 232

Query: 211 QVEEQQGQKPIEVFESSLPSVDSLNVNHLEKRLSMMTWNDIVPKV---KDSSNSNSNKCS 270
           +  +   Q+ I     SLP   S    +LE++LS++TW+ I  ++    ++ N+N N  S
Sbjct: 233 KKADFHAQEKI-----SLPIQRSDIAMNLERKLSLLTWDAIPNQLSTKNNNHNNNGNNSS 292

Query: 271 LIYN---DDAGSDASSDLFEIETLTGNPNSFLTTQPSDCTDCVTPTTCYAPSEASIEWSV 330
           +  N   ++  S ASSDLFEIE +T                    ++ Y PSEASI WSV
Sbjct: 293 MSSNTQEEETASVASSDLFEIENIT--------------------SSVYEPSEASIGWSV 351

Query: 331 ITAS------ATDFSDEHRLSTTSHDVK-----ASLRRRSNHLMGCKNEKAVRV 365
           +T S       +DF    R++     VK         R +  L GCK+ KAV V
Sbjct: 353 VTGSMADQSVISDFDMMKRVTRNGPVVKTKPVIGEKVRSAGFLSGCKSHKAVSV 351

[Close]

BLAST of Cp4.1LG01g12390.1 vs. TrEMBL
Match: A0A0A0KSN7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G605030 PE=4 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 1.8e-121
Identity = 284/465 (61.08%), Postives = 323/465 (69.46%), Query Frame = 1


Query: 4   RVSLPPPVCDTNLP--------------HLREASFSSYLNHAEKEFVRKLAESTRD--RS 63
           RVSLPPPVCDTNL               HLREASFSSYLNHAEKEFVRKLAESTRD  RS
Sbjct: 3   RVSLPPPVCDTNLSQRLSFENNNNNNNYHLREASFSSYLNHAEKEFVRKLAESTRDHHRS 62

Query: 64  NSVTTQEEQDGDIEVFGAEKYFNAGAFDTQ-KPLKFPPKKPHKR---ILHSKKPRTSTSS 123
           NS  TQE+ DGDIEVFGAEKYFN   F+T  KPLKF PKK  ++   ILH+  P+T    
Sbjct: 63  NSTKTQED-DGDIEVFGAEKYFNGAIFETTPKPLKFRPKKQQQKMMNILHTNHPKT---- 122

Query: 124 TTTTRSGSPSVRSQSSWNSQKALLQSSTV-NADSMSSKATKKSK-SSQLAKGFLYRCYCC 183
                   PS+RS+SSWNSQ  LLQ STV   +S SS  TKK K SSQLAK FLY CYC 
Sbjct: 123 --------PSLRSESSWNSQNPLLQGSTVVGTNSNSSNPTKKKKNSSQLAKDFLYNCYCW 182

Query: 184 D-----------KNLTKSKPNPKRRQT-TNAGSNFTFESSVPVDLTPKNSASALKMQIQV 243
           D           K  +K KP PK++Q  T  G NFTF+SS+P +       +A KMQIQV
Sbjct: 183 DNKSVESMNHNAKGKSKPKPKPKQKQQQTKTGINFTFQSSIPAE-------AAKKMQIQV 242

Query: 244 EEQQGQKPIEVFESSL---PS--VDSLNVNHLEKRLSMMTWNDIVPKVKDSSNSN---SN 303
           EEQQG++ IEVF SSL   PS  +D+LN+N+ EK+LS MTWNDIVP+VKDSSNSN   ++
Sbjct: 243 EEQQGRESIEVFGSSLMGKPSNNLDALNLNNFEKKLSTMTWNDIVPRVKDSSNSNISPTD 302

Query: 304 KCSLIYNDDAGSDASSDLFEIETLTGNPNSFLTTQPSDCTDC-VTPTTCYAPSEASIEWS 363
             +LIYNDD  SD+SSDLFEIE++T NPNSFLT Q SD TDC VTPTTCYAPSEASIEWS
Sbjct: 303 NSNLIYNDDVESDSSSDLFEIESITKNPNSFLTRQGSDSTDCCVTPTTCYAPSEASIEWS 362

Query: 364 VITASATDFS-----DEHRLSTTS--HDVKASL------RRRSNHLMGCKNEKAVRVAGD 413
           V+T SA DFS     DE RLS  S   +V  +       RRRSN LMGCKN+KAV VAGD
Sbjct: 363 VVTTSAADFSVVSDYDERRLSINSPVRNVTPAAAASYIQRRRSNLLMGCKNQKAVMVAGD 422

[Close]

BLAST of Cp4.1LG01g12390.1 vs. TrEMBL
Match: A0A0B2PWY5_GLYSO (Protein PHYTOCHROME KINASE SUBSTRATE 1 OS=Glycine soja GN=glysoja_031562 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 3.5e-40
Identity = 158/453 (34.88%), Postives = 234/453 (51.66%), Query Frame = 1


Query: 18  HLREASFSSYLNHAEKEFVRKLAESTRDRSNSVTTQEEQDGDIEVFGAEKYFNAGAFDTQ 77
           HLR+ASFSSYLN+ E+            R + +  ++E DG+I VF AEKYFN     + 
Sbjct: 27  HLRDASFSSYLNNKEEILTESGHGYVSSRKDPLGVKKEDDGEIGVFEAEKYFNGEEIGSP 86

Query: 78  KPL------KFPPKKPHKRILHSKKPRTSTSSTTTTRSGSPSVRSQSSWNSQKALLQSST 137
             +      K  P+K  +  L ++K +         ++G+PSVRS+SS NSQ ALLQS+ 
Sbjct: 87  PRVADNDANKHRPQKDEQTALVTRKYKV--------QNGTPSVRSESSLNSQSALLQSAV 146

Query: 138 VNAD-SMSSKATKKSKSSQLAKGFLYRCYCCDKNLTKSKPNPKRRQTTNAGSNFTFESSV 197
            N+  +M SK  +KS       G   +CYC D +      +   ++    G   + E+S+
Sbjct: 147 RNSSRNMKSKLHRKS----FLAGLGCKCYCSDISEISINKDVYFQRPEKLGVGLSKENSL 206

Query: 198 PVD-LTPKNSASALKMQIQVEEQQGQKPIEVFESSLPSVDSLNVNHLEKRL---SMMTWN 257
            +  L   +  +  KMQ+Q + ++ +  +EVF S + S  S +++  +KRL   S  +W 
Sbjct: 207 ALSGLNSSSGNNPAKMQLQ-QVEKSRNSLEVFGSPILSSRSKSLS-FDKRLAKTSSSSW- 266

Query: 258 DIVPKVKD---SSNSNSNKCSLIYNDDAGSDASSDLFEIETLTGNPNSFLTTQPSD--CT 317
           D  PK+++   S+NS  N     YND A SDASSDLFEIE+LTG  NSF   + S    +
Sbjct: 267 DAAPKIEETDFSANSGGN-----YND-ADSDASSDLFEIESLTGKSNSFFLGRSSSNVVS 326

Query: 318 DCVTPTTCYAPSEASIEWSVITASA------TDFSDEHRLSTTSHDVKASL--------- 377
            C +PTTCYAPSE SIEWSV TASA      +D+ D+  + TT   +  SL         
Sbjct: 327 SCASPTTCYAPSEVSIEWSVATASALEYSAMSDYDDQRSIGTTRSPITTSLVSSNGKPKV 386

Query: 378 ------RRRSNHLMGCKNEKAVRVAGDKYGSPEEI------QRRWESFGRLTRFEAQ--- 413
                 RRR + L+GCK++KAV VA D + + E+       +RR ++F ++T F+ +   
Sbjct: 387 VVKETQRRRPSMLLGCKSQKAVGVALDAFTTYEKTSSNANSRRRSDTFPQVTEFKTETTK 446

[Close]

BLAST of Cp4.1LG01g12390.1 vs. TrEMBL
Match: A0A068TVQ5_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00032226001 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.3e-39
Identity = 156/431 (36.19%), Postives = 226/431 (52.44%), Query Frame = 1


Query: 10  PVCDTNLP---------HLREASFSSYLNHAEKEFVRKLAESTRDRSNSVTT-------- 69
           P  +TN+P         +LR+ASFSSYLN +E+  V +LA+S++     ++T        
Sbjct: 6   PASETNIPRTVPFRNSSNLRDASFSSYLNGSEETSVHQLADSSKSCEPLISTPLDHLHLV 65

Query: 70  -QEEQDGDIEVFGAEKYFNAGAFDTQKPL--KFPPKKPHKRILHSKKPRTSTSSTTTTRS 129
            ++ +D +I++F A+KYFN G  +    +  K+ PK   K       P         T S
Sbjct: 66  SKKAEDTEIDIFSADKYFNEGVEEETPRIADKYSPKLDQK----MDPPPELDPLKQQTGS 125

Query: 130 GSPSVRSQSSWNSQKALLQSSTVNADSMSSKATKKSKSSQLAKGFLYRCYCCDKN-LTKS 189
           G+PS+RS+SSWNSQ ALLQ+  +  + +  K  K ++ S LA      C C DKN +   
Sbjct: 126 GTPSIRSESSWNSQNALLQN--IPRNQLPRKTNKANRRSFLA-NIACNCSCSDKNSVDID 185

Query: 190 KPNPKRRQTTNAGSNFTFESSVPVDLTPKNSASALKMQIQVEEQQGQK-PIEVFESSLPS 249
            P  +     +A     +  +            A++MQ + EE   ++  +EVF S    
Sbjct: 186 IPLGENNCNMSANGKQAYGKA-------GKPTKAVEMQRKKEEDDTRRISLEVFGSPTER 245

Query: 250 VDSLNVNHLEKRLSMMTWNDIVPKVKDSSNSNSNKCSLIYNDDAGSDASSDLFEIETLTG 309
               + + LE+ L+M+TW+ IVPKV +S    S++   +YN D  SDASSDLFEIE+ + 
Sbjct: 246 KGKKS-SSLERSLNMLTWDAIVPKVDESEVQASSRG--MYN-DTDSDASSDLFEIESFST 305

Query: 310 NPNSFLTTQPSDCTDCVTPTTCYAPSEASIEWSVITASATDFS-----DEHRLSTT---- 369
           NP+ +LT Q S+  + +T TTCYAPSEASIEWSV TASA DFS     +E R +TT    
Sbjct: 306 NPSQYLTRQASN--NSMTRTTCYAPSEASIEWSVATASAADFSVMSDTEELRSTTTKANP 365

Query: 370 ----------SHDVKASLRRRSNHLMGCKNEKAVRVAGDKYGSPEEI----QRRWESFGR 396
                     S  V+   +RRS  L GC ++KAVRVAGD Y + E       ++ E    
Sbjct: 366 RGNGMALNGRSTPVREMPKRRSGILSGCYSQKAVRVAGDVYRTGENTCPGRHQKTEFLMP 416

[Close]

BLAST of Cp4.1LG01g12390.1 vs. TrEMBL
Match: A0A0R0KUJ9_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_02G106800 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 8.7e-39
Identity = 164/488 (33.61%), Postives = 239/488 (48.98%), Query Frame = 1


Query: 18  HLREASFSSYLNHAEKEFVRKLAESTRDRSNSVTTQEEQDGDIEVFGAEKYFNAGAFDTQ 77
           HLR+ASFSSYLN+ E+            R + +  ++E DG+I VF AEKYFN     + 
Sbjct: 27  HLRDASFSSYLNNKEEILTESGHGYVSSRKDPLGVKKEDDGEIGVFEAEKYFNGEEIGSP 86

Query: 78  KPL------KFPPKKPHKRILHSKKPRTSTSSTTTTRSGSPSVRSQSSWNSQKALLQSST 137
             +      K  P+K  +  L ++K +         ++G+PSVRS+SS NSQ ALLQS+ 
Sbjct: 87  PRVADNDANKHRPQKDEQTALVTRKYKV--------QNGTPSVRSESSLNSQSALLQSAV 146

Query: 138 VNAD-SMSSKATKKSKSSQLAKGFLYRCYCCDKN----------LTKSKPNPKRRQTT-- 197
            N+  +M SK  +KS       G   +CYC DKN          ++ SK +   + T+  
Sbjct: 147 RNSSRNMKSKLHRKS----FLAGLGCKCYCSDKNSVDISDHAGEISFSKNSSHGKTTSRN 206

Query: 198 ------------------------NAGSNFTFESSVPVDLTPKNSASALKMQIQVEEQQG 257
                                   N    F     + V L+ +N  +  KMQ+Q + ++ 
Sbjct: 207 MFNADPEANHSVKVTRPHAAEISINKDVYFQRPEKLGVGLSKENRNNPAKMQLQ-QVEKS 266

Query: 258 QKPIEVFESSLPSVDSLNVNHLEKRL---SMMTWNDIVPKVKD---SSNSNSNKCSLIYN 317
           +  +EVF S + S  S +++  +KRL   S  +W D  PK+++   S+NS  N     YN
Sbjct: 267 RNSLEVFGSPILSSRSKSLS-FDKRLAKTSSSSW-DAAPKIEETDFSANSGGN-----YN 326

Query: 318 DDAGSDASSDLFEIETLTGNPNSFLTTQPSD--CTDCVTPTTCYAPSEASIEWSVITASA 377
            DA SDASSDLFEIE+LTG  NSF   + S    + C +PTTCYAPSE SIEWSV TASA
Sbjct: 327 -DADSDASSDLFEIESLTGKSNSFFLGRSSSNVVSSCASPTTCYAPSEVSIEWSVATASA 386

Query: 378 ------TDFSDEHRLSTTSHDVKASL---------------RRRSNHLMGCKNEKAVRVA 413
                 +D+ D+  + TT   +  SL               RRR + L+GCK++KAV VA
Sbjct: 387 LEYSAMSDYDDQRSIGTTRSPITTSLVSSNGKPKVVVKETQRRRPSMLLGCKSQKAVGVA 446

[Close]

BLAST of Cp4.1LG01g12390.1 vs. TrEMBL
Match: A0A067GTE6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g010843mg PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 4.3e-38
Identity = 174/490 (35.51%), Postives = 239/490 (48.78%), Query Frame = 1


Query: 12  CDTNLPHLREASFSSYLNHAEKEFVRKLAESTRDRSNSVTTQEEQ---------DGDIEV 71
           C++N    R+ASFSS LN   + FVRKL  S ++ S  + +QEEQ         + +I V
Sbjct: 20  CESNNNINRDASFSSSLNSTAENFVRKLTVSNQNLSPGIASQEEQEYLGANKVEEEEIGV 79

Query: 72  FGAEKYFNAGAFDTQKPLKFPPKKPHKRILHSKKPRTSTSST-TTTRSGSPSVRSQSSWN 131
           F AEKYFN GA D    L     + HK I   K+ +   +      + G+PSVRS+SS N
Sbjct: 80  FSAEKYFN-GAMDDSPRLPNVGARKHKCI---KEEQIKVAPVKPKLQPGTPSVRSESSCN 139

Query: 132 SQKALLQSSTVNADSMSSKATKKSKSSQLAKGFLYRCYCCDK---NLTKSKPNPKRRQTT 191
           SQ ALLQ+   N    S K   K +      G   +C C DK   ++ +       ++T 
Sbjct: 140 SQSALLQNVLRNP---SRKQANKVQGKSFFAGLGCKCSCSDKDSVDVDEHIGETSFKKTA 199

Query: 192 NAGS-------NFTFESSVPVDLTPKNSASALKMQIQVEEQQ-----------GQKPIEV 251
           N  S           + S  VD    + +S  K  + + ++            G  PI+V
Sbjct: 200 NCSSVHEKAIIKEPIKRSHLVDKVNIDESSFAKEDLVLNKENCFSFRTANSTTGNLPIKV 259

Query: 252 F------ESSLP--SVDSLNVNHLEK---------RLSMMTWNDIVPKVKDSSNSNSNKC 311
                  E  LP  S++      LEK         RLSM++W D  P++++   + +   
Sbjct: 260 HYEQEEKEEILPRKSLEVFGFPVLEKSSKSSCFDRRLSMLSW-DAAPRLEEFEFAATQGE 319

Query: 312 SLIYNDDAGSDASSDLFEIETLTGNPNSFLTTQPSDCT-DCVTPTTCYAPSEASIEWSVI 371
           S  YN DA SDASSDLFEIE+LTG  N FL  Q SD T DC TPT CYAPSEASIEWSV+
Sbjct: 320 S--YN-DATSDASSDLFEIESLTGKANPFLARQGSDATSDCATPTACYAPSEASIEWSVV 379

Query: 372 TASATDF---SDEHRL-------------STTSHD----VKASLRRRSNHLMGCKNEKAV 413
           TASA D+   SD   L             S TS+D    +  + +R  +  +GC + KAV
Sbjct: 380 TASAADYSVMSDYEELKAPTTATSQVKTFSATSNDRARTIPETAKRLPSISLGCNSHKAV 439

[Close]

BLAST of Cp4.1LG01g12390.1 vs. TAIR10
Match: AT2G02950.1 (AT2G02950.1 phytochrome kinase substrate 1)

HSP 1 Score: 122.1 bits (305), Expect = 8.1e-28
Identity = 133/394 (33.76%), Postives = 186/394 (47.21%), Query Frame = 1


Query: 23  SFSSYLNHAEKEFV--RKLAESTRDRSNSVTTQEEQDGD-------------IEVFGAEK 82
           S SSYL+  E   V  +KL E ++  + S+  ++E+ GD             I VFGAEK
Sbjct: 31  SSSSYLSSKEDALVTTKKLMEPSKTLNMSINPKQEEFGDEKKMVKKAPEDPEIGVFGAEK 90

Query: 83  YFNAGAFDTQ--KPLKFPPKKPHKRILHSKKPRTSTSSTTTTRSGSPSVRSQSSWNSQKA 142
           YFN      Q    L     +  + ++ SK+    ++       G+PSVRS+SSWNSQ  
Sbjct: 91  YFNGDMDSDQGSSVLSLTNPEVERTVVDSKQSAKKST-------GTPSVRSESSWNSQSV 150

Query: 143 LLQSSTVNADSMSSKATKKS-----KSSQLAKGFLY----RCYCCDKNLT--KSKPNPKR 202
           LLQ+  VN+ + S K  K S     K +   K FL     +C C D +    + K + KR
Sbjct: 151 LLQNKLVNSCNSSFKEKKNSNGQIQKVTNNKKSFLANLGCKCACSDGDSVDVEEKTSVKR 210

Query: 203 RQTTNAGSNFTFESSVPVDLTPKNSASALKMQIQVEEQQGQKPIEVFESSLPSVDSLNVN 262
               N  S  T  SS  ++         +K+Q Q EE   +K +EVF S +         
Sbjct: 211 SADPNI-SVITMRSSADMN------TELIKIQKQ-EELSQRKSLEVFGSPVA-------- 270

Query: 263 HLEKRLSMMTWNDIVPKVKDSSNSNSNKCSLIYNDDAGSDASSDLFEIETLTGNPNSFLT 322
            +EK+ S++     +P  K  +  +  K         GSD+SSDLFEIE LTGNP  FLT
Sbjct: 271 -IEKKSSVVQKKLPLPPWKSRTEEDDTKSE-------GSDSSSDLFEIEGLTGNPKPFLT 330

Query: 323 TQPSDCTDCVTPTTCYAPSEASIEWSVITASATDFSDEHRLSTT-------------SHD 368
            Q SD        TCYAPSE S+EWS++TASA DFS     +T+                
Sbjct: 331 RQGSD----PASPTCYAPSEVSVEWSIVTASAADFSVMSECATSPVRRNRPTQIPRIPIT 389

[Close]

BLAST of Cp4.1LG01g12390.1 vs. TAIR10
Match: AT1G14280.1 (AT1G14280.1 phytochrome kinase substrate 2)

HSP 1 Score: 99.8 bits (247), Expect = 4.3e-21
Identity = 134/436 (30.73%), Postives = 190/436 (43.58%), Query Frame = 1


Query: 17  PHLREASFSSYLNHAEKEFVRK-LAESTRDRSNSVTTQEEQDGDIEVFGAEKYFNAGAFD 76
           P    ++  SYL   E    +K L     +    +  +  +D +I VFGAEKYFN     
Sbjct: 31  PFSSSSTSFSYLTSKEDALTQKNLMSGITNDVLGINKKASEDLEISVFGAEKYFNGDMDS 90

Query: 77  TQKP-LKFP---PKKPHKRILHSKKPRTSTSSTTTTRSGSPSVRSQSSWNSQKALLQSST 136
              P L  P   P+ P +RI    K  +  SS T      PS+RS+SSWNSQ  LLQS  
Sbjct: 91  DHSPRLVSPLPDPEVPIERIFVGPKQSSKNSSET------PSLRSESSWNSQSLLLQSKY 150

Query: 137 VNA-------DSMSSKATKKSKSSQLA----KGFLYR--CYCCDKNLTKSKPNPKRRQTT 196
           V          S +S   +K  SS       K FL    C C   N +       +R+++
Sbjct: 151 VEKKKNIKKNSSCNSYFQEKDMSSNHKVSNKKSFLATLGCRCVCSNWSSVDVVDDKRRSS 210

Query: 197 NAGSNFTFESSVPVDLTPKNSASALKMQIQVEEQQGQKPIEVFESSLPSVDSLNVNHLEK 256
                 T + S   DL+ +      + +  +E++   K +E+F S L          +EK
Sbjct: 211 GLKKIKT-QLSFSGDLSSEMKIHQQQQEAMLEQR---KSLEIFGSPL----------IEK 270

Query: 257 RL--SMMTWNDIVPKVKDSSNSNSNKCSLIYN---DDAGSDASSDLFEIETLTGNPNSFL 316
           R+      W     +   S+    +  S+ Y    D + SD S+DLFEIE+LTG  N FL
Sbjct: 271 RIIQKKFPW-----EYSSSAKKEEHGFSVKYEEEEDGSVSDVSTDLFEIESLTGKANPFL 330

Query: 317 TTQPSDCTDCVTPTTCYAPSEASIEWSVITASATDFSDEHRLSTT--------------- 376
             Q S   D       YAPSE SI+WSV+TAS  DFS     +T+               
Sbjct: 331 ARQGSSDPDSPDG---YAPSEVSIQWSVVTASVADFSVMSECATSPVKKNRSFQIPRIPI 390

Query: 377 ---SHDVKASLRRRSNH---LMGCKNEKAVRVAGDKYGS----PEEIQRRWESFGRLTRF 405
              S+   A  RR+S+    LMGCK+ K+VRV+GD Y S    P  + R        +  
Sbjct: 391 MAKSNREIAPQRRKSSSSGLLMGCKSHKSVRVSGDSYTSMNRTPSYVPRFPVEANPTSTE 438

[Close]

BLAST of Cp4.1LG01g12390.1 vs. TAIR10
Match: AT1G18810.1 (AT1G18810.1 phytochrome kinase substrate-related)

HSP 1 Score: 71.6 bits (174), Expect = 1.2e-12
Identity = 106/354 (29.94%), Postives = 157/354 (44.35%), Query Frame = 1


Query: 31  AEKEFVRKL--AESTRDRSNSVTTQEEQDGDIEVFGAEKYFNAGAFDTQKPLKFPPKKPH 90
           AEK F  KL   +ST D    +T Q E++            N        P   P   PH
Sbjct: 53  AEKYFSMKLDHVDSTAD----ITKQHEKE------------NTHDHPNANPNPNPNPHPH 112

Query: 91  KRILHSKKPRTSTSSTTTTRSGSPSVRSQSSWNSQKALLQSSTVNADSMSSKATKKSKSS 150
               H +  +T++S + T+R G+PSVRS+SS NSQ  L++ +  N     +K  K + +S
Sbjct: 113 P---HPQLTKTTSSRSKTSRHGTPSVRSESSCNSQTFLMRINNHN----ENKQRKMNDTS 172

Query: 151 QLAKGFLYRCYCCDKNLTKSKPNPKRR-QTTNAGSNFTFESSVPVDLTPKNSASALKMQI 210
               GF  RCY     +     +PK   ++ N+  +F     V  D    N    L  + 
Sbjct: 173 ISFGGF--RCYGPCSGVKTVHTDPKNSCKSRNSDRDF-----VAYDARKHNDKPRLHFEA 232

Query: 211 QVEEQQGQKPIEVFESSLPSVDSLNVNHLEKRLSMMTWNDIVPKV---KDSSNSNSNKCS 270
           +  +   Q+ I     SLP   S    +LE++LS++TW+ I  ++    ++ N+N N  S
Sbjct: 233 KKADFHAQEKI-----SLPIQRSDIAMNLERKLSLLTWDAIPNQLSTKNNNHNNNGNNSS 292

Query: 271 LIYN---DDAGSDASSDLFEIETLTGNPNSFLTTQPSDCTDCVTPTTCYAPSEASIEWSV 330
           +  N   ++  S ASSDLFEIE +T                    ++ Y PSEASI WSV
Sbjct: 293 MSSNTQEEETASVASSDLFEIENIT--------------------SSVYEPSEASIGWSV 351

Query: 331 ITAS------ATDFSDEHRLSTTSHDVK-----ASLRRRSNHLMGCKNEKAVRV 365
           +T S       +DF    R++     VK         R +  L GCK+ KAV V
Sbjct: 353 VTGSMADQSVISDFDMMKRVTRNGPVVKTKPVIGEKVRSAGFLSGCKSHKAVSV 351

[Close]

BLAST of Cp4.1LG01g12390.1 vs. TAIR10
Match: AT5G04190.1 (AT5G04190.1 phytochrome kinase substrate 4)

HSP 1 Score: 50.1 bits (118), Expect = 3.9e-06
Identity = 103/372 (27.69%), Postives = 158/372 (42.47%), Query Frame = 1


Query: 21  EASFSSYLNHAEKEFVRKLAESTRDRSNSVTTQEEQDGDIEVFGAEKYFNAGAFDTQKPL 80
           + SFSSYL               +  +N    +E +D ++ +F A  YF+    +  +  
Sbjct: 31  DVSFSSYL---------------KPDNNEQQQKENEDTELSIFEARSYFSENGSNDSRCQ 90

Query: 81  KFPPKKPHKRILHSKKPRTSTSSTTTTRSGSPSVRSQSSWNSQKALLQSSTVNADSMSSK 140
                 P    + S K  + T   T +        S++SWNSQ  LL     N +   S 
Sbjct: 91  TRNLSGPRFSSVASAKVSSFTVGQTAS--------SEASWNSQTGLLS----NKNRQGSD 150

Query: 141 ATKKSKSSQLAKGFLYRCYC-CDKN----LTKSKPN---PKR---RQTTN--AGSNFTFE 200
              +  S +  + F  R  C C  +    + +SKP    PK    R  +N    S+ T  
Sbjct: 151 RDGRRSSKKGPRWFFRRRACPCSSSKSVQVQESKPRIAVPKTGSDRIVSNRIVHSHQTIS 210

Query: 201 SSVPVDLT-PKNSASALKMQIQVEEQQGQKPIEVFE-SSLPSVDSLNVNHLEKRLSMMTW 260
           S  P+ LT P N+ +  +       ++ + P+  F   +L     L+ N     L+ +  
Sbjct: 211 SPEPIRLTIPSNTVT--RSIDYTANKEARAPVSNFSFPTLNETSQLSENPKNPVLNHIKP 270

Query: 261 NDIVPK---VKDSSNSNSNKCSLIYNDDAGSDASSDLFEIETLTGNPNSFLTTQP-SDCT 320
             I P    +K   N  S K  +I +++A SDASSDLFEIE+ +    +     P  D  
Sbjct: 271 VRIEPALLPIKPVLNPTSPK-GVIIDEEATSDASSDLFEIESFSTQTAARPWAPPVRDSM 330

Query: 321 DCVTPTTCYAPSEASIEWSVITAS-----ATDFSDEHRLSTTSHDVKASLRRRSNHLMGC 369
           +       Y PSEAS+ WSV+TA      A +FS    LS++S       ++R+  L+ C
Sbjct: 331 EETVSEYGYEPSEASVTWSVMTAEPASAVAANFS-RIALSSSSTAFSGYDKKRTG-LLNC 370

[Close]

BLAST of Cp4.1LG01g12390.1 vs. NCBI nr
Match: gi|449435352|ref|XP_004135459.1| (PREDICTED: protein PHYTOCHROME KINASE SUBSTRATE 1-like [Cucumis sativus])

HSP 1 Score: 444.1 bits (1141), Expect = 2.6e-121
Identity = 284/465 (61.08%), Postives = 323/465 (69.46%), Query Frame = 1


Query: 4   RVSLPPPVCDTNLP--------------HLREASFSSYLNHAEKEFVRKLAESTRD--RS 63
           RVSLPPPVCDTNL               HLREASFSSYLNHAEKEFVRKLAESTRD  RS
Sbjct: 3   RVSLPPPVCDTNLSQRLSFENNNNNNNYHLREASFSSYLNHAEKEFVRKLAESTRDHHRS 62

Query: 64  NSVTTQEEQDGDIEVFGAEKYFNAGAFDTQ-KPLKFPPKKPHKR---ILHSKKPRTSTSS 123
           NS  TQE+ DGDIEVFGAEKYFN   F+T  KPLKF PKK  ++   ILH+  P+T    
Sbjct: 63  NSTKTQED-DGDIEVFGAEKYFNGAIFETTPKPLKFRPKKQQQKMMNILHTNHPKT---- 122

Query: 124 TTTTRSGSPSVRSQSSWNSQKALLQSSTV-NADSMSSKATKKSK-SSQLAKGFLYRCYCC 183
                   PS+RS+SSWNSQ  LLQ STV   +S SS  TKK K SSQLAK FLY CYC 
Sbjct: 123 --------PSLRSESSWNSQNPLLQGSTVVGTNSNSSNPTKKKKNSSQLAKDFLYNCYCW 182

Query: 184 D-----------KNLTKSKPNPKRRQT-TNAGSNFTFESSVPVDLTPKNSASALKMQIQV 243
           D           K  +K KP PK++Q  T  G NFTF+SS+P +       +A KMQIQV
Sbjct: 183 DNKSVESMNHNAKGKSKPKPKPKQKQQQTKTGINFTFQSSIPAE-------AAKKMQIQV 242

Query: 244 EEQQGQKPIEVFESSL---PS--VDSLNVNHLEKRLSMMTWNDIVPKVKDSSNSN---SN 303
           EEQQG++ IEVF SSL   PS  +D+LN+N+ EK+LS MTWNDIVP+VKDSSNSN   ++
Sbjct: 243 EEQQGRESIEVFGSSLMGKPSNNLDALNLNNFEKKLSTMTWNDIVPRVKDSSNSNISPTD 302

Query: 304 KCSLIYNDDAGSDASSDLFEIETLTGNPNSFLTTQPSDCTDC-VTPTTCYAPSEASIEWS 363
             +LIYNDD  SD+SSDLFEIE++T NPNSFLT Q SD TDC VTPTTCYAPSEASIEWS
Sbjct: 303 NSNLIYNDDVESDSSSDLFEIESITKNPNSFLTRQGSDSTDCCVTPTTCYAPSEASIEWS 362

Query: 364 VITASATDFS-----DEHRLSTTS--HDVKASL------RRRSNHLMGCKNEKAVRVAGD 413
           V+T SA DFS     DE RLS  S   +V  +       RRRSN LMGCKN+KAV VAGD
Sbjct: 363 VVTTSAADFSVVSDYDERRLSINSPVRNVTPAAAASYIQRRRSNLLMGCKNQKAVMVAGD 422

[Close]

BLAST of Cp4.1LG01g12390.1 vs. NCBI nr
Match: gi|659091051|ref|XP_008446342.1| (PREDICTED: protein PHYTOCHROME KINASE SUBSTRATE 1-like [Cucumis melo])

HSP 1 Score: 444.1 bits (1141), Expect = 2.6e-121
Identity = 283/467 (60.60%), Postives = 328/467 (70.24%), Query Frame = 1


Query: 4   RVSLPPPVCDTNLPH--------------LREASFSSYLNHAEKEFVRKLAESTRD--RS 63
           RVSLPPPVCDTNL H              LREASFSSYLNHAEKEFVRKLAESTRD  RS
Sbjct: 3   RVSLPPPVCDTNLSHRLSFENNNNNNNYHLREASFSSYLNHAEKEFVRKLAESTRDHHRS 62

Query: 64  NSVTTQEEQDGDIEVFGAEKYFNAGAFDTQ-KPLKFPPKKPHKR---ILHSKKPRTSTSS 123
           NS+ TQE+ DGDIEVFGAEKYFN   F+T  KPLKF PK+  ++   ILH+  P+T    
Sbjct: 63  NSIKTQED-DGDIEVFGAEKYFNGAIFETTPKPLKFRPKRQQQKMMNILHTNHPKT---- 122

Query: 124 TTTTRSGSPSVRSQSSWNSQKALLQSSTV-----NADSMSSKATKKSK-SSQLAKGFLYR 183
                   PS+RS+SSWNSQ  LLQSST+     NA + + K  KK K SSQLAKGFLY 
Sbjct: 123 --------PSLRSESSWNSQNPLLQSSTIVNTNSNASNPTKKKNKKKKNSSQLAKGFLYN 182

Query: 184 CYCCDKNLT---------KSKPNPKRRQT-TNAGSNFTFESSVPVDLTPKNSASALKMQI 243
           C C D             KSKP PK++Q  T  G NFTF+SS+P +       +A KMQI
Sbjct: 183 CSCWDNKSVESINHNAKLKSKPKPKQKQQQTKTGINFTFQSSIPAE-------AAKKMQI 242

Query: 244 QVEEQQGQKPIEVFESSL---PS--VDSLNVNHLEKRLSMMTWNDIVPKVKDSSNSN--- 303
           QVEEQQG++ IEVF SSL   PS  +D+LN+N+LEK+LS MTWNDIVP+VKDSSNSN   
Sbjct: 243 QVEEQQGRESIEVFGSSLMGKPSNNLDALNLNNLEKKLSTMTWNDIVPRVKDSSNSNIPT 302

Query: 304 SNKCSLIYNDDAGSDASSDLFEIETLTGNPNSFLTTQPSDCTD-CVTPTTCYAPSEASIE 363
           ++  +LI+NDD  SDASSDLFEIE+LT NP+SFLT Q SD TD CVTPTTCYAPSEASIE
Sbjct: 303 TDNPNLIFNDDMESDASSDLFEIESLTKNPDSFLTRQGSDSTDYCVTPTTCYAPSEASIE 362

Query: 364 WSVITASATDFS-----DEHRLSTTS--HDVKASL------RRRSNHLMGCKNEKAVRVA 413
           WS++TASA DFS     DEHRLS +S   +V ++       RRRSN LMGCKN+KAV VA
Sbjct: 363 WSIVTASAADFSVVSDYDEHRLSISSPVRNVTSAAAATYIRRRRSNLLMGCKNQKAVMVA 422

[Close]

BLAST of Cp4.1LG01g12390.1 vs. NCBI nr
Match: gi|734349800|gb|KHN12214.1| (Protein PHYTOCHROME KINASE SUBSTRATE 1 [Glycine soja])

HSP 1 Score: 174.1 bits (440), Expect = 5.1e-40
Identity = 158/453 (34.88%), Postives = 234/453 (51.66%), Query Frame = 1


Query: 18  HLREASFSSYLNHAEKEFVRKLAESTRDRSNSVTTQEEQDGDIEVFGAEKYFNAGAFDTQ 77
           HLR+ASFSSYLN+ E+            R + +  ++E DG+I VF AEKYFN     + 
Sbjct: 27  HLRDASFSSYLNNKEEILTESGHGYVSSRKDPLGVKKEDDGEIGVFEAEKYFNGEEIGSP 86

Query: 78  KPL------KFPPKKPHKRILHSKKPRTSTSSTTTTRSGSPSVRSQSSWNSQKALLQSST 137
             +      K  P+K  +  L ++K +         ++G+PSVRS+SS NSQ ALLQS+ 
Sbjct: 87  PRVADNDANKHRPQKDEQTALVTRKYKV--------QNGTPSVRSESSLNSQSALLQSAV 146

Query: 138 VNAD-SMSSKATKKSKSSQLAKGFLYRCYCCDKNLTKSKPNPKRRQTTNAGSNFTFESSV 197
            N+  +M SK  +KS       G   +CYC D +      +   ++    G   + E+S+
Sbjct: 147 RNSSRNMKSKLHRKS----FLAGLGCKCYCSDISEISINKDVYFQRPEKLGVGLSKENSL 206

Query: 198 PVD-LTPKNSASALKMQIQVEEQQGQKPIEVFESSLPSVDSLNVNHLEKRL---SMMTWN 257
            +  L   +  +  KMQ+Q + ++ +  +EVF S + S  S +++  +KRL   S  +W 
Sbjct: 207 ALSGLNSSSGNNPAKMQLQ-QVEKSRNSLEVFGSPILSSRSKSLS-FDKRLAKTSSSSW- 266

Query: 258 DIVPKVKD---SSNSNSNKCSLIYNDDAGSDASSDLFEIETLTGNPNSFLTTQPSD--CT 317
           D  PK+++   S+NS  N     YND A SDASSDLFEIE+LTG  NSF   + S    +
Sbjct: 267 DAAPKIEETDFSANSGGN-----YND-ADSDASSDLFEIESLTGKSNSFFLGRSSSNVVS 326

Query: 318 DCVTPTTCYAPSEASIEWSVITASA------TDFSDEHRLSTTSHDVKASL--------- 377
            C +PTTCYAPSE SIEWSV TASA      +D+ D+  + TT   +  SL         
Sbjct: 327 SCASPTTCYAPSEVSIEWSVATASALEYSAMSDYDDQRSIGTTRSPITTSLVSSNGKPKV 386

Query: 378 ------RRRSNHLMGCKNEKAVRVAGDKYGSPEEI------QRRWESFGRLTRFEAQ--- 413
                 RRR + L+GCK++KAV VA D + + E+       +RR ++F ++T F+ +   
Sbjct: 387 VVKETQRRRPSMLLGCKSQKAVGVALDAFTTYEKTSSNANSRRRSDTFPQVTEFKTETTK 446

[Close]

BLAST of Cp4.1LG01g12390.1 vs. NCBI nr
Match: gi|661895748|emb|CDP00326.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 171.4 bits (433), Expect = 3.3e-39
Identity = 156/431 (36.19%), Postives = 226/431 (52.44%), Query Frame = 1


Query: 10  PVCDTNLP---------HLREASFSSYLNHAEKEFVRKLAESTRDRSNSVTT-------- 69
           P  +TN+P         +LR+ASFSSYLN +E+  V +LA+S++     ++T        
Sbjct: 6   PASETNIPRTVPFRNSSNLRDASFSSYLNGSEETSVHQLADSSKSCEPLISTPLDHLHLV 65

Query: 70  -QEEQDGDIEVFGAEKYFNAGAFDTQKPL--KFPPKKPHKRILHSKKPRTSTSSTTTTRS 129
            ++ +D +I++F A+KYFN G  +    +  K+ PK   K       P         T S
Sbjct: 66  SKKAEDTEIDIFSADKYFNEGVEEETPRIADKYSPKLDQK----MDPPPELDPLKQQTGS 125

Query: 130 GSPSVRSQSSWNSQKALLQSSTVNADSMSSKATKKSKSSQLAKGFLYRCYCCDKN-LTKS 189
           G+PS+RS+SSWNSQ ALLQ+  +  + +  K  K ++ S LA      C C DKN +   
Sbjct: 126 GTPSIRSESSWNSQNALLQN--IPRNQLPRKTNKANRRSFLA-NIACNCSCSDKNSVDID 185

Query: 190 KPNPKRRQTTNAGSNFTFESSVPVDLTPKNSASALKMQIQVEEQQGQK-PIEVFESSLPS 249
            P  +     +A     +  +            A++MQ + EE   ++  +EVF S    
Sbjct: 186 IPLGENNCNMSANGKQAYGKA-------GKPTKAVEMQRKKEEDDTRRISLEVFGSPTER 245

Query: 250 VDSLNVNHLEKRLSMMTWNDIVPKVKDSSNSNSNKCSLIYNDDAGSDASSDLFEIETLTG 309
               + + LE+ L+M+TW+ IVPKV +S    S++   +YN D  SDASSDLFEIE+ + 
Sbjct: 246 KGKKS-SSLERSLNMLTWDAIVPKVDESEVQASSRG--MYN-DTDSDASSDLFEIESFST 305

Query: 310 NPNSFLTTQPSDCTDCVTPTTCYAPSEASIEWSVITASATDFS-----DEHRLSTT---- 369
           NP+ +LT Q S+  + +T TTCYAPSEASIEWSV TASA DFS     +E R +TT    
Sbjct: 306 NPSQYLTRQASN--NSMTRTTCYAPSEASIEWSVATASAADFSVMSDTEELRSTTTKANP 365

Query: 370 ----------SHDVKASLRRRSNHLMGCKNEKAVRVAGDKYGSPEEI----QRRWESFGR 396
                     S  V+   +RRS  L GC ++KAVRVAGD Y + E       ++ E    
Sbjct: 366 RGNGMALNGRSTPVREMPKRRSGILSGCYSQKAVRVAGDVYRTGENTCPGRHQKTEFLMP 416

[Close]

BLAST of Cp4.1LG01g12390.1 vs. NCBI nr
Match: gi|947122511|gb|KRH70717.1| (hypothetical protein GLYMA_02G106800 [Glycine max])

HSP 1 Score: 169.5 bits (428), Expect = 1.2e-38
Identity = 164/488 (33.61%), Postives = 239/488 (48.98%), Query Frame = 1


Query: 18  HLREASFSSYLNHAEKEFVRKLAESTRDRSNSVTTQEEQDGDIEVFGAEKYFNAGAFDTQ 77
           HLR+ASFSSYLN+ E+            R + +  ++E DG+I VF AEKYFN     + 
Sbjct: 27  HLRDASFSSYLNNKEEILTESGHGYVSSRKDPLGVKKEDDGEIGVFEAEKYFNGEEIGSP 86

Query: 78  KPL------KFPPKKPHKRILHSKKPRTSTSSTTTTRSGSPSVRSQSSWNSQKALLQSST 137
             +      K  P+K  +  L ++K +         ++G+PSVRS+SS NSQ ALLQS+ 
Sbjct: 87  PRVADNDANKHRPQKDEQTALVTRKYKV--------QNGTPSVRSESSLNSQSALLQSAV 146

Query: 138 VNAD-SMSSKATKKSKSSQLAKGFLYRCYCCDKN----------LTKSKPNPKRRQTT-- 197
            N+  +M SK  +KS       G   +CYC DKN          ++ SK +   + T+  
Sbjct: 147 RNSSRNMKSKLHRKS----FLAGLGCKCYCSDKNSVDISDHAGEISFSKNSSHGKTTSRN 206

Query: 198 ------------------------NAGSNFTFESSVPVDLTPKNSASALKMQIQVEEQQG 257
                                   N    F     + V L+ +N  +  KMQ+Q + ++ 
Sbjct: 207 MFNADPEANHSVKVTRPHAAEISINKDVYFQRPEKLGVGLSKENRNNPAKMQLQ-QVEKS 266

Query: 258 QKPIEVFESSLPSVDSLNVNHLEKRL---SMMTWNDIVPKVKD---SSNSNSNKCSLIYN 317
           +  +EVF S + S  S +++  +KRL   S  +W D  PK+++   S+NS  N     YN
Sbjct: 267 RNSLEVFGSPILSSRSKSLS-FDKRLAKTSSSSW-DAAPKIEETDFSANSGGN-----YN 326

Query: 318 DDAGSDASSDLFEIETLTGNPNSFLTTQPSD--CTDCVTPTTCYAPSEASIEWSVITASA 377
            DA SDASSDLFEIE+LTG  NSF   + S    + C +PTTCYAPSE SIEWSV TASA
Sbjct: 327 -DADSDASSDLFEIESLTGKSNSFFLGRSSSNVVSSCASPTTCYAPSEVSIEWSVATASA 386

Query: 378 ------TDFSDEHRLSTTSHDVKASL---------------RRRSNHLMGCKNEKAVRVA 413
                 +D+ D+  + TT   +  SL               RRR + L+GCK++KAV VA
Sbjct: 387 LEYSAMSDYDDQRSIGTTRSPITTSLVSSNGKPKVVVKETQRRRPSMLLGCKSQKAVGVA 446

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g12390.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PKS1_ARATH	1.4e-26	33.76	Protein PHYTOCHROME KINASE SUBSTRATE 1 OS=Arabidopsis thaliana GN=PKS1 PE=1 SV=2	[more]
PKS2_ARATH	7.6e-20	30.73	Protein PHYTOCHROME KINASE SUBSTRATE 2 OS=Arabidopsis thaliana GN=PKS2 PE=1 SV=1	[more]
PKS3_ARATH	2.2e-11	29.94	Protein PHYTOCHROME KINASE SUBSTRATE 3 OS=Arabidopsis thaliana GN=PKS3 PE=2 SV=2	[more]

BLAST of Cp4.1LG01g12390.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KSN7_CUCSA	1.8e-121	61.08	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G605030 PE=4 SV=1	[more]
A0A0B2PWY5_GLYSO	3.5e-40	34.88	Protein PHYTOCHROME KINASE SUBSTRATE 1 OS=Glycine soja GN=glysoja_031562 PE=4 SV...	[more]
A0A068TVQ5_COFCA	2.3e-39	36.19	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00032226001 PE=4 SV=1	[more]
A0A0R0KUJ9_SOYBN	8.7e-39	33.61	Uncharacterized protein OS=Glycine max GN=GLYMA_02G106800 PE=4 SV=1	[more]
A0A067GTE6_CITSI	4.3e-38	35.51	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g010843mg PE=4 SV=1	[more]

BLAST of Cp4.1LG01g12390.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G02950.1	8.1e-28	33.76	phytochrome kinase substrate 1	[more]
AT1G14280.1	4.3e-21	30.73	phytochrome kinase substrate 2	[more]
AT1G18810.1	1.2e-12	29.94	phytochrome kinase substrate-related	[more]
AT5G04190.1	3.9e-06	27.69	phytochrome kinase substrate 4	[more]

BLAST of Cp4.1LG01g12390.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449435352\|ref\|XP_004135459.1\|	2.6e-121	61.08	PREDICTED: protein PHYTOCHROME KINASE SUBSTRATE 1-like [Cucumis sativus]	[more]
gi\|659091051\|ref\|XP_008446342.1\|	2.6e-121	60.60	PREDICTED: protein PHYTOCHROME KINASE SUBSTRATE 1-like [Cucumis melo]	[more]
gi\|734349800\|gb\|KHN12214.1\|	5.1e-40	34.88	Protein PHYTOCHROME KINASE SUBSTRATE 1 [Glycine soja]	[more]
gi\|661895748\|emb\|CDP00326.1\|	3.3e-39	36.19	unnamed protein product [Coffea canephora]	[more]
gi\|947122511\|gb\|KRH70717.1\|	1.2e-38	33.61	hypothetical protein GLYMA_02G106800 [Glycine max]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG01g12390	Cp4.1LG01g12390	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG01g12390.1:cds:001	Cp4.1LG01g12390.1:cds:001	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG01g12390.1	Cp4.1LG01g12390.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33781	FAMILY NOT NAMED	coord: 18..412 score: 4.6
None	No IPR available	PANTHER	PTHR33781:SF4	PROTEIN PHYTOCHROME KINASE SUBSTRATE 1-RELATED	coord: 18..412 score: 4.6