Cp4.1LG01g10260.1 (mRNA) Cucurbita pepo (Zucchini)

NameCp4.1LG01g10260.1
TypemRNA
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUbiquitin carboxyl-terminal hydrolase
LocationCp4.1LG01 : 6777187 .. 6781169 (-)
Sequence length2342
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAAGGTTATTTTAGATTAAATGATTGATCATCCGTGGCTAGGGTTTCGAATTTCCAAATCTTCTTCTTCTTCTTCTTCTTCTTCTCCTCGTTGGTGATCGGTCGATGCTTTGTGCTGTGGTTCTGGTCGGTGAGGAGGGCCATAGAGAGGGTTCCATTGTCAAACGCTCTCTCTCTTCACCCACTGCTCAGTTTCTTCTCCTTTCATGTCTTCAGTCGGTGGTTTGCCATTATCTGCTCCTCATTCTTCAGGGTCTTCTAAAACCCTAGCCGTTCACTCCGCTTCCTCCCCTCCATGCCTGCTTCCTTTTCTCCTTCTTTATAGTCAACACCCCTGTTTTCATCTCAGGCTTTTTTCCTTGCAATTCCAATCCGGTTTCAGACATGAGCGATTCTAAGGTCCGCTTTTGTTTTTGCATTTACTTTTATTGGATTCTTTAGCTTTTGGTCGTCGGAATGGAGTTGATGGTTTTATCTGATAAGAAGCATGCAGCTGCAAGTATTTCATCAAGTTTACTCTTTTGACTAAATGTTAACAATTAGAAAAAAAAAAAAAAATCATATGCGTGAACTTTTTGCAATTTGCATGGACCCATTTAAATATGGAATGAATGGCTGAATTATTATGCAATCGAGATGAAAAGCCATGTTGATTTTAGGAAGCATCTAAGGCAATGCATTGTCTAACACATTGATATATGGAAACTGTCTTCGAGTGTAGATGGTTTTTCCCGTCTTTTGTTCTTAGTTTTTTCAATTTATTATTAGACATCAGTTGCGTTTTTGCTTTTGTTACATGCCACTTACTAGCTAAGGTCAATTTTTTGTTATGAGTATTCTTACTATTTGATCAAATGGATTTGAATGATTTCATTGTATTTGTTAATGGTTTCTGCATTGGTGTGTTTGAGACCTCTGGACTCATGGACTCTTTTCTGTTAGGTTCTATTATTCGGGTCTTTCAATGAAGACGAAACCATTTCATGGATACTACCTCAGTCGAATATTAATCCCAGAAAGCTGGTCGACAATGTAAATGTGCAATTTGGTTCTCTGAATGTTACAGATGGAAAATCGCTGGGCAGTTCTGCTGACAGTGAACCGAAAGGACCCTCTGGTTCCTCAACGGGATCCATAACTTTGGAGTCTGTTGATTTAGCTAAGGATGATACTGAACTGGAAACTGTCCAAAGAAGAAAAATTCATTCTCCCCTGGAATCAGGAGTGCCAAAGGAGAACGGAAGTAATTACAATTCCAATCAAAGCTCCTCTTGTACTAGTGGAGTGACTGAAACGAATATAGATGACACTGATGCTTTGTCATCATGTGTATCAAATGGTCAGAACAATTCTTTAAATCGGTTTTCAAAACTGATAGCAGAAGATAGCATGCCAAATGGTAGTATTGATCATTTGCAAGACATTGTTCTCGAAGAGAATTTCAGAAGGGCATCCAATGTCTCTGTTGCCTCCTCCACTAAGTACCTACCTCGAGGTTTAATAAATTCAGGGAACTTATGCTTTCTGAACTCGACTCTGCAAGCTCTTTTATCATGTCCTCCCTTTGTTGATCTATTGAGAAACTTAAGGAATCGTGCAATCCCCAAGGTCCTTGTCCTTCCTGTTATATTCTGTTTTGTTCCAGTGATATAAAGAAATCACAAAGCAAATAGATATGGAGTTATATGGTTAATGACTGTTGTTTCTGTAAATATATGGCAAACTCTTGACTTTGTCATTTATTTTTCAGGCTGGTTATTCCACACTAAATGCATTTGTAGAGTTCATATCTGCCTTTGAAGTACCTAGTTCAAGTGTTCTGAGTAAGGATGTCGCTGCATTTGACGTTGGGAAGCCTTTTAGCCCTCTCATGTTTGATGGCATTCTTAAAAATTTTAGTCCAGATCTACCCTGCGGTATCAAGGGCCGTCCAAGGTTTGTTGATGTATATCTTTTCATTTCAATACTGAACTCTCATCCTTGGTTGTGGTTTTTTTTTTTTTTTTTACTGGAACTTCAATAAAAAAAACGAGACTTCCACTGATATGATGTCTATTAGAAATTGTAGATTCAATTATCGCCTCTAAAATACTCTTTATGCTTGAAATAAACGAATCTTAAATTCCTGTCATTATGCTTATCCAGGCAGGAAGACGCACAAGAATTTTTAAGTTTTGTCATGGATCGAATGCATGCTGAATTGCTGAAGCTTGATGGAACGTCTTCAAGTATGAATGGAGGTAAATCTTTTGTAGTTGCTTCTGCCGAAGATGATGAATGGGAGACAGTTGGGCGGAAGAACAAAACTGCAGTGATGAGAACACAGAGTTTTGTTCCTTCAGAGTTGACTGAAATTTTTGGGGGGCAACTGACAAGCATGGTGAAAGCAAGAGGTAGGTAGTATATGCTCCACCATACACATGGGCACAAGAGTCATGGGTTTTTGGTCTGCTATTGTTTTGGTTTTTAAAGCGAATGGAGGATTGTAAATAATTTTGGTTTAGAATTTAATTAGTATCTTGGAATCCCTCTAAAATTCAATGGACAGGAACCAAATATTTTATTGCTGTCTAGATACTTGCTTTTTCTTGATATGAACACCTCTGATCCATTTTCTTCTATGGGATTGAGTAGGAAATAAACCTTCAGCTACTGGCCAGCCATTTTTTTCACTGCACCTTGATATCTACCCTCAAGCTGTTCGCACTATCGAGGATGCTCTACGTTTGTTTTCTGCACCCGAAACTCTTGAAGGGTACCGGTCATCAGCTGCTGGGAAGGTGTACTATCTTGTGCATAGCTATAGAATCCTCTTTCTGATGTGTGAATATTGAGTGCAGACACTCTTCACTAAGCATACTTTTAGTTTCATATGTTTCTAAAATTTAGATATATTTTATGCAGGCTGGCGTTGTGTCTGCTAGCAAATCTGTGAAAATACAGAAACTGTCCAAGATAATGATACTGCACCTGAAGCGTTTTGGCTATGGAAGCCACGGAAGTACCAAGTTGAATAAGTCTGTGCATTTCCCACTTGAGCTGGTTTTAAACCGCGATCTTCTTGTGTCGTCCTCCACAGAGGTACTTGATATTCGACCCTCTTACGTTACTGTTTTTTAATACCTAAAGTTCATAGTCAAGTGTGAGATCCCACCTTGGTTGGAGAGAGGAACGAAACATTCCTTTTAAGGGTGTGGAAACCTCTCCCTAGTAGACTTGTTTTAAAACCTCAAAGGGAAAGTCCTTGAATGGAAAGCCAATAGAGGACAATATCTGGTAACAGTCGTAGTGGGCTTAGGCCGTTACATTGAAACTAGATTACCCTCTCTAATGGTTTGTGGTCTTTAGAGAGAGATTGTGTGTGTGTATTGGGGGCGAGGGGTGGGGTGGGGTATTGGTATCAACTATATCAATTGGAAAGAAAGCTAGCTAATTGTGTTCTTGTCATTGCAATTCTTTCAGGGTAGGAAATATGAACTTGTGGCTACCATAACCCATCATGGAAGAGAGTCCTCAAAGGGACATTACACTGCTGATGTTCGATACCATAACGACCAATGGCTTCGATTTGACGATGCATCTGTCACTGCAATCGGGAAAGATAACGTGTTACATGACAGGGCCTATGTTCTCTTCTACAAACGAGTTTAAGGTATCAAAACTTCGACACAGAGTCCTTTGTGGATCAAATATGATATCAACTTGGAAAATTCGTTCTGCTATCGAGGCATGTGGTGATAGAATATGATGATTTGAACTCGTTATCTGTATCAAGATGAAATTTTGCAATTTGCAGCCCCTGGTTTTTGTTCTTGTTTTTGGTGGGTTTATATTACTAGTAAATAGTACATTGTCTAGTGGTGCAACAATTATAAAATACTAAGTCAAAGGTTAAACAATGATATACTTTTTCTATCAAGGGCACAACACTAAATTTGTACTTTACATTCATTCAATGAATGTCTTGAATGCTTTTTTGTTCTT

mRNA sequence

TAAGGTTATTTTAGATTAAATGATTGATCATCCGTGGCTAGGGTTTCGAATTTCCAAATCTTCTTCTTCTTCTTCTTCTTCTTCTCCTCGTTGGTGATCGGTCGATGCTTTGTGCTGTGGTTCTGGTCGGTGAGGAGGGCCATAGAGAGGGTTCCATTGTCAAACGCTCTCTCTCTTCACCCACTGCTCAGTTTCTTCTCCTTTCATGTCTTCAGTCGGTGGTTTGCCATTATCTGCTCCTCATTCTTCAGGGTCTTCTAAAACCCTAGCCGTTCACTCCGCTTCCTCCCCTCCATGCCTGCTTCCTTTTCTCCTTCTTTATAGTCAACACCCCTGTTTTCATCTCAGGCTTTTTTCCTTGCAATTCCAATCCGGTTTCAGACATGAGCGATTCTAAGGTTCTATTATTCGGGTCTTTCAATGAAGACGAAACCATTTCATGGATACTACCTCAGTCGAATATTAATCCCAGAAAGCTGGTCGACAATGTAAATGTGCAATTTGGTTCTCTGAATGTTACAGATGGAAAATCGCTGGGCAGTTCTGCTGACAGTGAACCGAAAGGACCCTCTGGTTCCTCAACGGGATCCATAACTTTGGAGTCTGTTGATTTAGCTAAGGATGATACTGAACTGGAAACTGTCCAAAGAAGAAAAATTCATTCTCCCCTGGAATCAGGAGTGCCAAAGGAGAACGGAAGTAATTACAATTCCAATCAAAGCTCCTCTTGTACTAGTGGAGTGACTGAAACGAATATAGATGACACTGATGCTTTGTCATCATGTGTATCAAATGGTCAGAACAATTCTTTAAATCGGTTTTCAAAACTGATAGCAGAAGATAGCATGCCAAATGGTAGTATTGATCATTTGCAAGACATTGTTCTCGAAGAGAATTTCAGAAGGGCATCCAATGTCTCTGTTGCCTCCTCCACTAAGTACCTACCTCGAGGTTTAATAAATTCAGGGAACTTATGCTTTCTGAACTCGACTCTGCAAGCTCTTTTATCATGTCCTCCCTTTGTTGATCTATTGAGAAACTTAAGGAATCGTGCAATCCCCAAGGCTGGTTATTCCACACTAAATGCATTTGTAGAGTTCATATCTGCCTTTGAAGTACCTAGTTCAAGTGTTCTGAGTAAGGATGTCGCTGCATTTGACGTTGGGAAGCCTTTTAGCCCTCTCATGTTTGATGGCATTCTTAAAAATTTTAGTCCAGATCTACCCTGCGGTATCAAGGGCCGTCCAAGGCAGGAAGACGCACAAGAATTTTTAAGTTTTGTCATGGATCGAATGCATGCTGAATTGCTGAAGCTTGATGGAACGTCTTCAAGTATGAATGGAGGTAAATCTTTTGTAGTTGCTTCTGCCGAAGATGATGAATGGGAGACAGTTGGGCGGAAGAACAAAACTGCAGTGATGAGAACACAGAGTTTTGTTCCTTCAGAGTTGACTGAAATTTTTGGGGGGCAACTGACAAGCATGGTGAAAGCAAGAGGAAATAAACCTTCAGCTACTGGCCAGCCATTTTTTTCACTGCACCTTGATATCTACCCTCAAGCTGTTCGCACTATCGAGGATGCTCTACGTTTGTTTTCTGCACCCGAAACTCTTGAAGGGTACCGGTCATCAGCTGCTGGGAAGGCTGGCGTTGTGTCTGCTAGCAAATCTGTGAAAATACAGAAACTGTCCAAGATAATGATACTGCACCTGAAGCGTTTTGGCTATGGAAGCCACGGAAGTACCAAGTTGAATAAGTCTGTGCATTTCCCACTTGAGCTGGTTTTAAACCGCGATCTTCTTGTGTCGTCCTCCACAGAGGGTAGGAAATATGAACTTGTGGCTACCATAACCCATCATGGAAGAGAGTCCTCAAAGGGACATTACACTGCTGATGTTCGATACCATAACGACCAATGGCTTCGATTTGACGATGCATCTGTCACTGCAATCGGGAAAGATAACGTGTTACATGACAGGGCCTATGTTCTCTTCTACAAACGAGTTTAAGGTATCAAAACTTCGACACAGAGTCCTTTGTGGATCAAATATGATATCAACTTGGAAAATTCGTTCTGCTATCGAGGCATGTGGTGATAGAATATGATGATTTGAACTCGTTATCTGTATCAAGATGAAATTTTGCAATTTGCAGCCCCTGGTTTTTGTTCTTGTTTTTGGTGGGTTTATATTACTAGTAAATAGTACATTGTCTAGTGGTGCAACAATTATAAAATACTAAGTCAAAGGTTAAACAATGATATACTTTTTCTATCAAGGGCACAACACTAAATTTGTACTTTACATTCATTCAATGAATGTCTTGAATGCTTTTTTGTTCTT

Coding sequence (CDS)

ATGAGCGATTCTAAGGTTCTATTATTCGGGTCTTTCAATGAAGACGAAACCATTTCATGGATACTACCTCAGTCGAATATTAATCCCAGAAAGCTGGTCGACAATGTAAATGTGCAATTTGGTTCTCTGAATGTTACAGATGGAAAATCGCTGGGCAGTTCTGCTGACAGTGAACCGAAAGGACCCTCTGGTTCCTCAACGGGATCCATAACTTTGGAGTCTGTTGATTTAGCTAAGGATGATACTGAACTGGAAACTGTCCAAAGAAGAAAAATTCATTCTCCCCTGGAATCAGGAGTGCCAAAGGAGAACGGAAGTAATTACAATTCCAATCAAAGCTCCTCTTGTACTAGTGGAGTGACTGAAACGAATATAGATGACACTGATGCTTTGTCATCATGTGTATCAAATGGTCAGAACAATTCTTTAAATCGGTTTTCAAAACTGATAGCAGAAGATAGCATGCCAAATGGTAGTATTGATCATTTGCAAGACATTGTTCTCGAAGAGAATTTCAGAAGGGCATCCAATGTCTCTGTTGCCTCCTCCACTAAGTACCTACCTCGAGGTTTAATAAATTCAGGGAACTTATGCTTTCTGAACTCGACTCTGCAAGCTCTTTTATCATGTCCTCCCTTTGTTGATCTATTGAGAAACTTAAGGAATCGTGCAATCCCCAAGGCTGGTTATTCCACACTAAATGCATTTGTAGAGTTCATATCTGCCTTTGAAGTACCTAGTTCAAGTGTTCTGAGTAAGGATGTCGCTGCATTTGACGTTGGGAAGCCTTTTAGCCCTCTCATGTTTGATGGCATTCTTAAAAATTTTAGTCCAGATCTACCCTGCGGTATCAAGGGCCGTCCAAGGCAGGAAGACGCACAAGAATTTTTAAGTTTTGTCATGGATCGAATGCATGCTGAATTGCTGAAGCTTGATGGAACGTCTTCAAGTATGAATGGAGGTAAATCTTTTGTAGTTGCTTCTGCCGAAGATGATGAATGGGAGACAGTTGGGCGGAAGAACAAAACTGCAGTGATGAGAACACAGAGTTTTGTTCCTTCAGAGTTGACTGAAATTTTTGGGGGGCAACTGACAAGCATGGTGAAAGCAAGAGGAAATAAACCTTCAGCTACTGGCCAGCCATTTTTTTCACTGCACCTTGATATCTACCCTCAAGCTGTTCGCACTATCGAGGATGCTCTACGTTTGTTTTCTGCACCCGAAACTCTTGAAGGGTACCGGTCATCAGCTGCTGGGAAGGCTGGCGTTGTGTCTGCTAGCAAATCTGTGAAAATACAGAAACTGTCCAAGATAATGATACTGCACCTGAAGCGTTTTGGCTATGGAAGCCACGGAAGTACCAAGTTGAATAAGTCTGTGCATTTCCCACTTGAGCTGGTTTTAAACCGCGATCTTCTTGTGTCGTCCTCCACAGAGGGTAGGAAATATGAACTTGTGGCTACCATAACCCATCATGGAAGAGAGTCCTCAAAGGGACATTACACTGCTGATGTTCGATACCATAACGACCAATGGCTTCGATTTGACGATGCATCTGTCACTGCAATCGGGAAAGATAACGTGTTACATGACAGGGCCTATGTTCTCTTCTACAAACGAGTTTAA

Protein sequence

MSDSKVLLFGSFNEDETISWILPQSNINPRKLVDNVNVQFGSLNVTDGKSLGSSADSEPKGPSGSSTGSITLESVDLAKDDTELETVQRRKIHSPLESGVPKENGSNYNSNQSSSCTSGVTETNIDDTDALSSCVSNGQNNSLNRFSKLIAEDSMPNGSIDHLQDIVLEENFRRASNVSVASSTKYLPRGLINSGNLCFLNSTLQALLSCPPFVDLLRNLRNRAIPKAGYSTLNAFVEFISAFEVPSSSVLSKDVAAFDVGKPFSPLMFDGILKNFSPDLPCGIKGRPRQEDAQEFLSFVMDRMHAELLKLDGTSSSMNGGKSFVVASAEDDEWETVGRKNKTAVMRTQSFVPSELTEIFGGQLTSMVKARGNKPSATGQPFFSLHLDIYPQAVRTIEDALRLFSAPETLEGYRSSAAGKAGVVSASKSVKIQKLSKIMILHLKRFGYGSHGSTKLNKSVHFPLELVLNRDLLVSSSTEGRKYELVATITHHGRESSKGHYTADVRYHNDQWLRFDDASVTAIGKDNVLHDRAYVLFYKRV
BLAST of Cp4.1LG01g10260.1 vs. Swiss-Prot
Match: UBP24_ARATH (Ubiquitin carboxyl-terminal hydrolase 24 OS=Arabidopsis thaliana GN=UBP24 PE=1 SV=1)

HSP 1 Score: 493.4 bits (1269), Expect = 3.1e-138
Identity = 290/562 (51.60%), Postives = 373/562 (66.37%), Query Frame = 1

Query: 1   MSDSKVLLFGSFNEDETISWILPQSNINPRKLVDNV--NVQFGSLNVT-DGKSLGSSADS 60
           MS+ KV +FGSF E ET S+   +   +P+   D    ++QFGSLN+  +  S+ ++ + 
Sbjct: 1   MSEKKVFVFGSFTEHETRSFFEQKPTKDPQNSKDKCVGSIQFGSLNLAAENSSVNTNGEL 60

Query: 61  EPKGPSGSSTGSITLESVDLAK-------DDTELETVQRRKIHSP---LESGVPKENGSN 120
           +     G+   + + E +D ++       +D++ +  ++  +  P   +++G+ KE    
Sbjct: 61  KKGEADGTVKSAGSQERLDASRPASSDKNNDSDAKLPRKNSLRVPEHVVQNGIIKEI--- 120

Query: 121 YNSNQSSSCTSGVT-ETNIDDTDALSSCVSNGQNN-----SLNRFSKLIAEDSMPNGSID 180
             S  + S  +GV  +T+    D LS  +S+G+++     S ++F  L  ED   + S  
Sbjct: 121 --SESNKSLNNGVAVKTDPIGLDNLS--MSDGESDPVYKASSSKFQALDNEDFSSDSSSG 180

Query: 181 HLQDIVLEENFRRASNVSVASSTKYLPRGLINSGNLCFLNSTLQALLSCPPFVDLLRNLR 240
            +Q     +   +    SV     + PRGLIN+GNLCFLN+TLQALLSC PFV LL+ ++
Sbjct: 181 SIQ----RKKNLKVPTESVPPVKDFTPRGLINAGNLCFLNATLQALLSCSPFVQLLQKIQ 240

Query: 241 NRAIPKAGYSTLNAFVEFISAFEVPSSSVLSKDVAAFDVGKPFSPLMFDGILKNFSPDLP 300
            + IPKA   TL AF EFIS  +VPSSS +  +V   + G+PF P MF+G+L+NF+PD+ 
Sbjct: 241 LQDIPKADSPTLAAFSEFISELDVPSSSSIRNNVTVVEAGRPFRPAMFEGVLRNFTPDVL 300

Query: 301 CGIKGRPRQEDAQEFLSFVMDRMHAELLKLDGTSSSMNGGKSFVVASAEDD--EWETVGR 360
             + GRPRQEDAQEFLSF+MD+MH ELLKL   S  +   KS V++SA DD  EWETVG 
Sbjct: 301 NNMSGRPRQEDAQEFLSFIMDQMHDELLKLKEQSPKVTASKSSVISSANDDGDEWETVGP 360

Query: 361 KNKTAVMRTQSFVPSELTEIFGGQLTSMVKARGNKPSATGQPFFSLHLDIYPQAVRTIED 420
           KNK+AV RTQSFVPSEL+EIFGGQL S+VKA+G K SAT QP+  LHLDI+P  V+ IED
Sbjct: 361 KNKSAVTRTQSFVPSELSEIFGGQLKSVVKAKGTKASATVQPYLLLHLDIHPDGVQGIED 420

Query: 421 ALRLFSAPETLEGYRSSAAGKAGVVSASKSVKIQKLSKIMILHLKRFGYGSHGSTKLNKS 480
           AL LFSA E LEGYR+S  GK GVVSASKS+KIQKLSKIMILHL RF YGS GSTKL K 
Sbjct: 421 ALHLFSAQEDLEGYRASVTGKTGVVSASKSIKIQKLSKIMILHLMRFSYGSQGSTKLRKG 480

Query: 481 VHFPLELVLNRDLLVSSSTEGRKYELVATITHHGRESSKGHYTADVRYHNDQWLRFDDAS 540
           V FPLEL LNR  LVS S E  +YELVATITHHG + SKGHYT D R  N QWLRFDDAS
Sbjct: 481 VKFPLELNLNRSHLVSLSNESLRYELVATITHHGWDPSKGHYTTDARRKNGQWLRFDDAS 540

Query: 541 VTAIGKDNVLHDRAYVLFYKRV 542
           VT IG   VLHD+AYVLFYK+V
Sbjct: 541 VTPIGTKLVLHDQAYVLFYKQV 551

BLAST of Cp4.1LG01g10260.1 vs. Swiss-Prot
Match: UBP10_RAT (Ubiquitin carboxyl-terminal hydrolase 10 OS=Rattus norvegicus GN=Usp10 PE=1 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 5.6e-55
Identity = 140/389 (35.99%), Postives = 209/389 (53.73%), Query Frame = 1

Query: 188 PRGLINSGNLCFLNSTLQALLSCPPFVDLLRNL---RNRAIPKAGYSTLNAFVEFISAFE 247
           PRGLIN GN C++N+TLQAL++CPP   L++ +        P      +++FV  ++ F 
Sbjct: 410 PRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPMIDSFVRLMNEFT 469

Query: 248 ------VPSSSVLSKDVAAFDVGKPFSPLMFDGILKNFSPDLPCGIKGRPRQEDAQEFLS 307
                  P  ++  K V     G  F P     +L      L      + RQEDA+E+L 
Sbjct: 470 NMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVIKSSL----SEKGRQEDAEEYLG 529

Query: 308 FVMDRMHAELLKLDGTSSSM-------NGGKSFVVASAE--------DDEWETVGRKNKT 367
           F+++ +H E+L L    S         NG  S ++   E        +DEWE VG KNKT
Sbjct: 530 FILNGLHEEMLSLKKLLSPTHEKHSVSNGPGSHLIEDEELEDTGEGSEDEWEQVGPKNKT 589

Query: 368 AVMRTQSFVPSELTEIFGGQLTSMVKARGNKPSATGQPFFSLHLDIYPQAVRTIEDALRL 427
           +V R   FV + +T IFGG + S+V  + +K SAT QPFF+L LDI    +RT++DAL  
Sbjct: 590 SVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDALES 649

Query: 428 FSAPETLEGYRSSAAGKAGVVSASKSVKIQKLSKIMILHLKRFGY-GSHGSTKLNKSVHF 487
             A E+++GY +    +   V  S+ V ++KL  +++LHLKRF Y  + G  KL K++ +
Sbjct: 650 LVARESVQGYTTKTKQE---VEVSRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLVKNIEY 709

Query: 488 PLELVLNRDLLVSSSTE-----GRKYELVATITHHGRESSKGHYTADV-RYHNDQWLRFD 542
           P++L ++R+LL            R Y L A + HHG  ++ GHYT DV +   + WLR D
Sbjct: 710 PVDLEISRELLSPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWLRID 769

BLAST of Cp4.1LG01g10260.1 vs. Swiss-Prot
Match: UB10B_XENLA (Ubiquitin carboxyl-terminal hydrolase 10-B OS=Xenopus laevis GN=usp10-b PE=2 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 3.6e-54
Identity = 136/393 (34.61%), Postives = 216/393 (54.96%), Query Frame = 1

Query: 188 PRGLINSGNLCFLNSTLQALLSCPPFVDLLRNL---RNRAIPKAGYSTLNAFVEFISAF- 247
           PRGLIN GN C++N+TLQAL++CPP   L++++        P      +++FV  ++ F 
Sbjct: 421 PRGLINKGNWCYINATLQALVACPPMYHLMKSIPVYTKAQRPCTSTPMIDSFVRLMNEFT 480

Query: 248 ---------EVPSSSVLSKDVAAFDVGKPFSPLMFDGILKNFSPDLPCGIKGRPRQEDAQ 307
                    + P   V+ KD+     G PF P     +L  F   L      + RQEDA+
Sbjct: 481 NMPILPKAKQAPGEKVI-KDIRP---GAPFEPTYIYRLLTVFKSSL----SEKGRQEDAE 540

Query: 308 EFLSFVMDRMHAELLKL-------------DGTSSSMNGGKSFVVASAE--DDEWETVGR 367
           E+L F+++ +H E+L L             +   + ++G +       E  D+EWE VG 
Sbjct: 541 EYLGFILNGLHEEMLALKKLLLPQNDQIHINNCPNPVSGVEEVNKEEQEGSDEEWEQVGP 600

Query: 368 KNKTAVMRTQSFVPSELTEIFGGQLTSMVKARGNKPSATGQPFFSLHLDIYPQAVRTIED 427
           +NK++V R   FV + +T+IFGG + S+V  + +K SAT QPFF+L LDI  + +RT++D
Sbjct: 601 RNKSSVTRQADFVQTPITDIFGGHMRSVVYQQSSKESATLQPFFTLQLDIQSEKIRTVQD 660

Query: 428 ALRLFSAPETLEGYRSSAAGKAGVVSASKSVKIQKLSKIMILHLKRFGY-GSHGSTKLNK 487
           AL    A E+++GY +    +   V   + V +++L  +++LHLKRF +  + G  KL K
Sbjct: 661 ALESLVARESVQGYTTKTKQE---VEICRRVTLEELPPVLVLHLKRFVFEKTGGCQKLIK 720

Query: 488 SVHFPLELVLNRDLL----VSSSTEG-RKYELVATITHHGRESSKGHYTADV-RYHNDQW 542
           ++ +P++L +++DLL     S   +G R Y L A + HHG  ++ GHYT DV +   + W
Sbjct: 721 NIEYPVDLEVSKDLLSPGVKSKIFKGQRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGW 780

BLAST of Cp4.1LG01g10260.1 vs. Swiss-Prot
Match: UB10A_XENLA (Ubiquitin carboxyl-terminal hydrolase 10-A OS=Xenopus laevis GN=usp10-a PE=2 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 8.1e-54
Identity = 164/539 (30.43%), Postives = 273/539 (50.65%), Query Frame = 1

Query: 42  SLNVTDGKSLGSSADSEPKGPSGSSTGSITLESVDLAKDDT--ELETVQRRKIHSP--LE 101
           +L VT+G++L S     P+  + S+   +  E + L+++    E+ T Q   IH P    
Sbjct: 274 NLGVTNGQTLES-----PEEDTASNGVVLHPEVISLSEEAKAEEISTAQA-VIHLPGSAS 333

Query: 102 SGVPKENGSNYNSNQSSSCTSGVTETNIDDTDALSSCVSNGQNNSLNRFSKLIAEDSMPN 161
           +  P ++ ++   N   S T  V      +T  ++S     +   +      ++ED +  
Sbjct: 334 ANAPAKSWASLFHNSKPSSTPQVAYVETKNTPPVTSLQVTEKQVEIKEGPVPVSEDPVAI 393

Query: 162 GSIDHLQDIVLEENFRRASNVSVASSTKYLPRGLINSGNLCFLNSTLQALLSCPPFVDLL 221
              + L+++ L           V       PRGLIN GN C++N+TLQAL++CPP   L+
Sbjct: 394 KIAELLEEVKL-----------VHKPVSLQPRGLINKGNWCYINATLQALVACPPMYHLM 453

Query: 222 RNL---RNRAIPKAGYSTLNAFVEFISAFE----VPSSSVLSKDVAAFDV--GKPFSPLM 281
           +++        P      +++FV  ++ F     +P +     +    D+  G PF P  
Sbjct: 454 KSIPVYTKAQKPCTSTPMIDSFVRLMNEFTNMPILPKAKQAPGEKVVRDIRPGAPFEPAY 513

Query: 282 FDGILKNFSPDLPCGIKGRPRQEDAQEFLSFVMDRMHAELLKL------DGTSSSMNGGK 341
              +L  F   L      + RQEDA+E+L F+++ +H E+L L            +N G 
Sbjct: 514 IYRLLTVFKSSL----SEKGRQEDAEEYLGFILNGLHEEMLALKKLLLPQNDKIHINNGP 573

Query: 342 SFVVASAE---------DDEWETVGRKNKTAVMRTQSFVPSELTEIFGGQLTSMVKARGN 401
             V A+ E         D+EWE VG +NK++V R   FV + +T+IFGG + S+V  + +
Sbjct: 574 DPVFATEEVNKEEQEGSDEEWEQVGPRNKSSVTRQADFVQTPITDIFGGHMRSVVYQQSS 633

Query: 402 KPSATGQPFFSLHLDIYPQAVRTIEDALRLFSAPETLEGYRSSAAGKAGVVSASKSVKIQ 461
           K SAT QPFF+L LDI  + +RT++DAL    A E+++GY +    +   V   + V ++
Sbjct: 634 KESATLQPFFTLQLDIQSEKIRTVQDALESLVARESVQGYTTKTKQE---VEICRRVTLE 693

Query: 462 KLSKIMILHLKRFGY-GSHGSTKLNKSVHFPLELVLNRDLL----VSSSTEG-RKYELVA 521
           +L  +++LHLKRF +  + G  KL K++ +P++L +++DLL     S   +G R Y L A
Sbjct: 694 ELPPVLVLHLKRFVFEKTGGCQKLIKNIEYPVDLEISKDLLSPGVKSKIFKGQRTYRLFA 753

Query: 522 TITHHGRESSKGHYTADV-RYHNDQWLRFDDASVTAIGKDNVLHD----RAYVLFYKRV 542
            + HHG  ++ GHYT DV +   + WLR DD +V  I +  V+       AY+L+Y+RV
Sbjct: 754 VVYHHGNSATGGHYTTDVFQIGLNGWLRIDDQTVKVINQYQVVKQTVERTAYLLYYRRV 788

BLAST of Cp4.1LG01g10260.1 vs. Swiss-Prot
Match: UBP10_MOUSE (Ubiquitin carboxyl-terminal hydrolase 10 OS=Mus musculus GN=Usp10 PE=1 SV=3)

HSP 1 Score: 212.6 bits (540), Expect = 1.1e-53
Identity = 138/389 (35.48%), Postives = 209/389 (53.73%), Query Frame = 1

Query: 188 PRGLINSGNLCFLNSTLQALLSCPPFVDLLRNL---RNRAIPKAGYSTLNAFVEFISAFE 247
           PRGLIN GN C++N+TLQAL++CPP   L++ +        P      +++FV  ++ F 
Sbjct: 408 PRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPMIDSFVRLMNEFT 467

Query: 248 ------VPSSSVLSKDVAAFDVGKPFSPLMFDGILKNFSPDLPCGIKGRPRQEDAQEFLS 307
                  P  ++  K V     G  F P     +L      L      + RQEDA+E+L 
Sbjct: 468 NMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVIKSSL----SEKGRQEDAEEYLG 527

Query: 308 FVMDRMHAELLKLDGTSSSM-------NGGKSFVVASAE--------DDEWETVGRKNKT 367
           F+++ +H E+L L    S         NG +S ++   E        +DEWE VG KNKT
Sbjct: 528 FILNGLHEEMLSLKKLLSPTHEKHSVSNGPRSDLIEDEELEDTGKGSEDEWEQVGPKNKT 587

Query: 368 AVMRTQSFVPSELTEIFGGQLTSMVKARGNKPSATGQPFFSLHLDIYPQAVRTIEDALRL 427
           ++ R   FV + +T IFGG + S+V  + +K SAT Q FF+L LDI    +RT++DAL  
Sbjct: 588 SITRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQLFFTLQLDIQSDKIRTVQDALES 647

Query: 428 FSAPETLEGYRSSAAGKAGVVSASKSVKIQKLSKIMILHLKRFGY-GSHGSTKLNKSVHF 487
             A E+++GY +    +   V  S+ V ++KL  +++LHLKRF Y  + G  KL K++ +
Sbjct: 648 LVARESVQGYTTKTKQE---VEVSRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLVKNIDY 707

Query: 488 PLELVLNRDLLVSSSTE-----GRKYELVATITHHGRESSKGHYTADV-RYHNDQWLRFD 542
           P++L ++R+LL            R Y L A + HHG  ++ GHYT DV +   + WLR D
Sbjct: 708 PVDLEISRELLSPGIKNKNFKCQRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWLRID 767

BLAST of Cp4.1LG01g10260.1 vs. TrEMBL
Match: A0A0A0KLJ2_CUCSA (Ubiquitin carboxyl-terminal hydrolase OS=Cucumis sativus GN=Csa_5G175860 PE=3 SV=1)

HSP 1 Score: 899.4 bits (2323), Expect = 2.1e-258
Identity = 466/542 (85.98%), Postives = 495/542 (91.33%), Query Frame = 1

Query: 1   MSDSKVLLFGSFNEDETISWILPQSNINPRKLVDNVNVQFGSLNVTDGKSLGSSADSEPK 60
           MSDSKVLLFGSF EDET SW+ P+ N++P +LV+NVNVQFGSLN TDGKSLGSSADSE K
Sbjct: 1   MSDSKVLLFGSFTEDETNSWMPPKLNVSPGRLVNNVNVQFGSLNFTDGKSLGSSADSELK 60

Query: 61  GPSGSSTGSITLESVDLAKDDTELETVQRRKIHSPLESGVPKENGSNYNSNQSSSCTSGV 120
           GPSGSSTGSIT  S DLA+DDTELE VQR + HSPLES VPKENGSNYNSN+S SC++GV
Sbjct: 61  GPSGSSTGSITFGSTDLARDDTELEIVQRSESHSPLESEVPKENGSNYNSNKSFSCSNGV 120

Query: 121 TETNIDDTDALSSCVSNGQ-NNSLNRFSKLIAEDSMPNGSIDHLQDIVLEENFRRASNVS 180
           + T IDD DA S CVSNG  NNSLN+FS+LIAED   NGSIDHL + VL+ENFRRASNVS
Sbjct: 121 STTKIDDIDASSLCVSNGHHNNSLNQFSRLIAEDIKENGSIDHLPENVLKENFRRASNVS 180

Query: 181 VASSTKYLPRGLINSGNLCFLNSTLQALLSCPPFVDLLRNLRNRAIPKAGYSTLNAFVEF 240
           V SST  LPRGLINSGNLCFLNSTLQALLSCPPFVDLLRNL+NR IPK GYSTL AFVEF
Sbjct: 181 VTSSTTLLPRGLINSGNLCFLNSTLQALLSCPPFVDLLRNLQNREIPKVGYSTLTAFVEF 240

Query: 241 ISAFEVPSSSVLSKDVAAFDVGKPFSPLMFDGILKNFSPDLPCGIKGRPRQEDAQEFLSF 300
           ISA EVPSS+VL++DVAA DVGKPF PLMFDG+LKNFSPDLP GI GRPRQEDAQEFLSF
Sbjct: 241 ISALEVPSSTVLNRDVAASDVGKPFIPLMFDGVLKNFSPDLPSGILGRPRQEDAQEFLSF 300

Query: 301 VMDRMHAELLKLDGTSSSMNGGKSFVVASAEDDEWETVGRKNKTAVMRTQSFVPSELTEI 360
           VMDRMHAELLKLDG SSS NGGKSFVVASAEDDEWETVGRKN+TAVMRTQSFVPSEL+EI
Sbjct: 301 VMDRMHAELLKLDGKSSSTNGGKSFVVASAEDDEWETVGRKNRTAVMRTQSFVPSELSEI 360

Query: 361 FGGQLTSMVKARGNKPSATGQPFFSLHLDIYPQAVRTIEDALRLFSAPETLEGYRSSAAG 420
           FGGQLTSMVKA+GNKPSAT QPF SLHLDI P AVRTIEDALRLFSAPETLEGYR S+AG
Sbjct: 361 FGGQLTSMVKAKGNKPSATLQPFLSLHLDICPDAVRTIEDALRLFSAPETLEGYRPSSAG 420

Query: 421 KAGVVSASKSVKIQKLSKIMILHLKRFGYGSHGSTKLNKSVHFPLELVLNRDLLVSSSTE 480
           KAGVV+ASKSVKIQK SKIMILHLKRFGYGSHGSTKLNK VHFPLELVLNRDLLVSSSTE
Sbjct: 421 KAGVVAASKSVKIQKQSKIMILHLKRFGYGSHGSTKLNKPVHFPLELVLNRDLLVSSSTE 480

Query: 481 GRKYELVATITHHGRESSKGHYTADVRYHNDQWLRFDDASVTAIGKDNVLHDRAYVLFYK 540
           GRKYELVATITHHGRESSKGHYTADVRYHN+QWLRFDDASVTAIGK+NVLHDRAYVLFYK
Sbjct: 481 GRKYELVATITHHGRESSKGHYTADVRYHNNQWLRFDDASVTAIGKNNVLHDRAYVLFYK 540

Query: 541 RV 542
           +V
Sbjct: 541 QV 542

BLAST of Cp4.1LG01g10260.1 vs. TrEMBL
Match: A0A061FJS7_THECC (Ubiquitin-specific protease 24 isoform 1 OS=Theobroma cacao GN=TCM_042388 PE=3 SV=1)

HSP 1 Score: 588.2 bits (1515), Expect = 1.0e-164
Identity = 323/550 (58.73%), Postives = 391/550 (71.09%), Query Frame = 1

Query: 1   MSDSKVLLFGSFNEDETISWILPQSNINPRKLVDNVNVQFGSLNVTDGKSLGSSADSEPK 60
           M+DSKV LFGSF+EDET S +  +S  N  K V    +Q GSLN   G SLG +      
Sbjct: 1   MTDSKVFLFGSFSEDETRSLLSKRSAGNAEKPVQKKELQSGSLNFAAGGSLGGANGDLSN 60

Query: 61  GPSGSSTGSITLESVDLAKDDTELETVQRRKIHSPLESGVPKENGSNYNSNQSSSCTSGV 120
            PS ++     L S     D    ++++  + H+      PKENG+  ++N+SSS ++G+
Sbjct: 61  KPSSTNRPVGFLSSTSPIADR---KSIKSARDHTSTTLQTPKENGTTKSTNESSSLSNGI 120

Query: 121 TETNIDDTDALSSCVSNGQNNSLNRFSKL----IAEDSMP----NGSIDHLQDIVLEENF 180
            + N+  TD  S  +S     SLN F  L    +  +SM     NG ID      ++ + 
Sbjct: 121 KQLNVKSTDVTSLHLSQNDCGSLNNFQSLKFHVLESESMEGRDQNGMIDISLACTVDGDI 180

Query: 181 RRASNVSVASSTKYLPRGLINSGNLCFLNSTLQALLSCPPFVDLLRNLRNRAIPKAGYST 240
            +A+   +  +   L RGLIN+GNLCFLN+TLQALLSC PFV LL+ LR R IPK G+ T
Sbjct: 181 PKAAKEPITVAKNLLSRGLINTGNLCFLNATLQALLSCSPFVQLLQRLRLRNIPKVGFPT 240

Query: 241 LNAFVEFISAFEVPSSS--VLSKDVAAFDVGKPFSPLMFDGILKNFSPDLPCGIKGRPRQ 300
           L AF EF+S F+VPSS+  V  KD    ++G+PFSP MF+ +LK+F+PD+P  I GRPRQ
Sbjct: 241 LTAFAEFVSDFDVPSSNPNVKKKDTTVLEIGRPFSPAMFEAVLKSFTPDVPNSISGRPRQ 300

Query: 301 EDAQEFLSFVMDRMHAELLKLDGTSSSMNGGKSFVVASAEDDEWETVGRKNKTAVMRTQS 360
           EDAQEFLSF+MD+MH EL+KLDG  SS  G +S +V+S EDDEWETVG KNK+A+ RTQS
Sbjct: 301 EDAQEFLSFIMDQMHNELIKLDGQPSSSIGVRSSLVSSVEDDEWETVGPKNKSAITRTQS 360

Query: 361 FVPSELTEIFGGQLTSMVKARGNKPSATGQPFFSLHLDIYPQAVRTIEDALRLFSAPETL 420
           F+PSEL++IFGGQL S+VKARGNK SAT QPF  LHLDI+P+AV TIEDAL LFSAPE L
Sbjct: 361 FLPSELSDIFGGQLRSVVKARGNKASATVQPFLLLHLDIHPEAVLTIEDALHLFSAPEYL 420

Query: 421 EGYRSSAAGKAGVVSASKSVKIQKLSKIMILHLKRFGYGSHGSTKLNKSVHFPLELVLNR 480
           EGYR+S AGKAGVV+A KSVKIQ LSKIMILHL RF YGS GSTKL+K V FPLELVL R
Sbjct: 421 EGYRASTAGKAGVVTARKSVKIQTLSKIMILHLMRFSYGSQGSTKLHKPVRFPLELVLGR 480

Query: 481 DLLVSSSTEGRKYELVATITHHGRESSKGHYTADVRYHNDQWLRFDDASVTAIGKDNVLH 540
           +LLVS STEGRKYELVATITHHGRE SKGHYTAD RY N QWLRFDDASVTAIG   VLH
Sbjct: 481 ELLVSPSTEGRKYELVATITHHGREPSKGHYTADARYLNGQWLRFDDASVTAIGTSKVLH 540

BLAST of Cp4.1LG01g10260.1 vs. TrEMBL
Match: A0A061FL09_THECC (Ubiquitin-specific protease 24 isoform 4 OS=Theobroma cacao GN=TCM_042388 PE=3 SV=1)

HSP 1 Score: 583.9 bits (1504), Expect = 1.9e-163
Identity = 323/551 (58.62%), Postives = 391/551 (70.96%), Query Frame = 1

Query: 1   MSDSK-VLLFGSFNEDETISWILPQSNINPRKLVDNVNVQFGSLNVTDGKSLGSSADSEP 60
           M+DSK V LFGSF+EDET S +  +S  N  K V    +Q GSLN   G SLG +     
Sbjct: 1   MTDSKQVFLFGSFSEDETRSLLSKRSAGNAEKPVQKKELQSGSLNFAAGGSLGGANGDLS 60

Query: 61  KGPSGSSTGSITLESVDLAKDDTELETVQRRKIHSPLESGVPKENGSNYNSNQSSSCTSG 120
             PS ++     L S     D    ++++  + H+      PKENG+  ++N+SSS ++G
Sbjct: 61  NKPSSTNRPVGFLSSTSPIAD---RKSIKSARDHTSTTLQTPKENGTTKSTNESSSLSNG 120

Query: 121 VTETNIDDTDALSSCVSNGQNNSLNRFSKL----IAEDSM----PNGSIDHLQDIVLEEN 180
           + + N+  TD  S  +S     SLN F  L    +  +SM     NG ID      ++ +
Sbjct: 121 IKQLNVKSTDVTSLHLSQNDCGSLNNFQSLKFHVLESESMEGRDQNGMIDISLACTVDGD 180

Query: 181 FRRASNVSVASSTKYLPRGLINSGNLCFLNSTLQALLSCPPFVDLLRNLRNRAIPKAGYS 240
             +A+   +  +   L RGLIN+GNLCFLN+TLQALLSC PFV LL+ LR R IPK G+ 
Sbjct: 181 IPKAAKEPITVAKNLLSRGLINTGNLCFLNATLQALLSCSPFVQLLQRLRLRNIPKVGFP 240

Query: 241 TLNAFVEFISAFEVPSS--SVLSKDVAAFDVGKPFSPLMFDGILKNFSPDLPCGIKGRPR 300
           TL AF EF+S F+VPSS  +V  KD    ++G+PFSP MF+ +LK+F+PD+P  I GRPR
Sbjct: 241 TLTAFAEFVSDFDVPSSNPNVKKKDTTVLEIGRPFSPAMFEAVLKSFTPDVPNSISGRPR 300

Query: 301 QEDAQEFLSFVMDRMHAELLKLDGTSSSMNGGKSFVVASAEDDEWETVGRKNKTAVMRTQ 360
           QEDAQEFLSF+MD+MH EL+KLDG  SS  G +S +V+S EDDEWETVG KNK+A+ RTQ
Sbjct: 301 QEDAQEFLSFIMDQMHNELIKLDGQPSSSIGVRSSLVSSVEDDEWETVGPKNKSAITRTQ 360

Query: 361 SFVPSELTEIFGGQLTSMVKARGNKPSATGQPFFSLHLDIYPQAVRTIEDALRLFSAPET 420
           SF+PSEL++IFGGQL S+VKARGNK SAT QPF  LHLDI+P+AV TIEDAL LFSAPE 
Sbjct: 361 SFLPSELSDIFGGQLRSVVKARGNKASATVQPFLLLHLDIHPEAVLTIEDALHLFSAPEY 420

Query: 421 LEGYRSSAAGKAGVVSASKSVKIQKLSKIMILHLKRFGYGSHGSTKLNKSVHFPLELVLN 480
           LEGYR+S AGKAGVV+A KSVKIQ LSKIMILHL RF YGS GSTKL+K V FPLELVL 
Sbjct: 421 LEGYRASTAGKAGVVTARKSVKIQTLSKIMILHLMRFSYGSQGSTKLHKPVRFPLELVLG 480

Query: 481 RDLLVSSSTEGRKYELVATITHHGRESSKGHYTADVRYHNDQWLRFDDASVTAIGKDNVL 540
           R+LLVS STEGRKYELVATITHHGRE SKGHYTAD RY N QWLRFDDASVTAIG   VL
Sbjct: 481 RELLVSPSTEGRKYELVATITHHGREPSKGHYTADARYLNGQWLRFDDASVTAIGTSKVL 540

BLAST of Cp4.1LG01g10260.1 vs. TrEMBL
Match: A0A061FLP2_THECC (Ubiquitin-specific protease 24 isoform 3 OS=Theobroma cacao GN=TCM_042388 PE=3 SV=1)

HSP 1 Score: 583.6 bits (1503), Expect = 2.5e-163
Identity = 323/551 (58.62%), Postives = 391/551 (70.96%), Query Frame = 1

Query: 1   MSDSKVLLFGSFNEDETISWILPQSNINPRKLVDNVNVQFGSLNVTDGKSLGSSADSEPK 60
           M+DSKV LFGSF+EDET S +  +S  N  K V    +Q GSLN   G SLG +      
Sbjct: 1   MTDSKVFLFGSFSEDETRSLLSKRSAGNAEKPVQKKELQSGSLNFAAGGSLGGANGDLSN 60

Query: 61  GPSGSSTGSITLESVDLAKDDTELETVQRRKIHSPLESGVPKENGSNYNSNQSSSCTSGV 120
            PS ++     L S     D    ++++  + H+      PKENG+  ++N+SSS ++G+
Sbjct: 61  KPSSTNRPVGFLSSTSPIADR---KSIKSARDHTSTTLQTPKENGTTKSTNESSSLSNGI 120

Query: 121 TETNIDDTDALSSCVSNGQNNSLNRFSKL----IAEDSMP----NGSIDHLQDIVLEENF 180
            + N+  TD  S  +S     SLN F  L    +  +SM     NG ID      ++ + 
Sbjct: 121 KQLNVKSTDVTSLHLSQNDCGSLNNFQSLKFHVLESESMEGRDQNGMIDISLACTVDGDI 180

Query: 181 RRASNVSVASSTKYLPRGLINSGNLCFLNSTLQALLSCPPFVDLLRNLRNRAIPKAGYST 240
            +A+   +  +   L RGLIN+GNLCFLN+TLQALLSC PFV LL+ LR R IPK G+ T
Sbjct: 181 PKAAKEPITVAKNLLSRGLINTGNLCFLNATLQALLSCSPFVQLLQRLRLRNIPKVGFPT 240

Query: 241 LNAFVEFISAFEVPSSS--VLSKDVAAFDVGKPFSPLMFDGILKNFSPDLPCGIKGRPRQ 300
           L AF EF+S F+VPSS+  V  KD    ++G+PFSP MF+ +LK+F+PD+P  I GRPRQ
Sbjct: 241 LTAFAEFVSDFDVPSSNPNVKKKDTTVLEIGRPFSPAMFEAVLKSFTPDVPNSISGRPRQ 300

Query: 301 EDAQEFLSFVMDRMHAELLKLDGTSSSMNGGKSFVVASAEDDEWETVGRKNKTAVMRTQS 360
           EDAQEFLSF+MD+MH EL+KLDG  SS  G +S +V+S EDDEWETVG KNK+A+ RTQS
Sbjct: 301 EDAQEFLSFIMDQMHNELIKLDGQPSSSIGVRSSLVSSVEDDEWETVGPKNKSAITRTQS 360

Query: 361 FVPSELTEIFGGQLTSMVKARGNKPSATGQPFFSLHLDIYPQAVRTIEDALRLFSAPETL 420
           F+PSEL++IFGGQL S+VKARGNK SAT QPF  LHLDI+P+AV TIEDAL LFSAPE L
Sbjct: 361 FLPSELSDIFGGQLRSVVKARGNKASATVQPFLLLHLDIHPEAVLTIEDALHLFSAPEYL 420

Query: 421 EGYRSSAAGK-AGVVSASKSVKIQKLSKIMILHLKRFGYGSHGSTKLNKSVHFPLELVLN 480
           EGYR+S AGK AGVV+A KSVKIQ LSKIMILHL RF YGS GSTKL+K V FPLELVL 
Sbjct: 421 EGYRASTAGKQAGVVTARKSVKIQTLSKIMILHLMRFSYGSQGSTKLHKPVRFPLELVLG 480

Query: 481 RDLLVSSSTEGRKYELVATITHHGRESSKGHYTADVRYHNDQWLRFDDASVTAIGKDNVL 540
           R+LLVS STEGRKYELVATITHHGRE SKGHYTAD RY N QWLRFDDASVTAIG   VL
Sbjct: 481 RELLVSPSTEGRKYELVATITHHGREPSKGHYTADARYLNGQWLRFDDASVTAIGTSKVL 540

BLAST of Cp4.1LG01g10260.1 vs. TrEMBL
Match: A0A0D2UFG1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G192300 PE=3 SV=1)

HSP 1 Score: 578.9 bits (1491), Expect = 6.3e-162
Identity = 321/553 (58.05%), Postives = 385/553 (69.62%), Query Frame = 1

Query: 1   MSDSKVLLFGSFNEDETISWILPQSNINPRKLVDNVNVQFGSLNVTDGKSLGSSADSEPK 60
           M+DSKV +FGSF EDET S +  QS+ N  K V    +QFGS N   G SLGS   +   
Sbjct: 1   MTDSKVFVFGSFTEDETRSLLSKQSSGNSEKPVATKELQFGSFNFAAGGSLGSVNGNLSN 60

Query: 61  GPSGSSTGSITLESVDLAKDDTELETVQRRKI---HSPLESGVPKENGSNYNSNQSSSCT 120
            PS       T E ++     + +E  + RK    HS      PKE GS  +S+ S S +
Sbjct: 61  KPSS------TNEPIEFLSSTSRIEDGKSRKTTTDHSLNALQTPKEAGSANSSSSSCSLS 120

Query: 121 SGVTETNIDDTDALS--------SCVSNGQNNSLNRFSKLIAEDSMPNGSIDHLQDIVLE 180
           +GV + N    D  S        + +S+ Q++  +     I ED   NG++D      + 
Sbjct: 121 NGVKQLNAKGIDVTSVHLTINELNPLSDSQSSKFHVLESEIIEDRDQNGTVDTSLGGSIR 180

Query: 181 ENFRRASNVSVASSTKYLPRGLINSGNLCFLNSTLQALLSCPPFVDLLRNLRNRAIPKAG 240
            +  +     +      +PRGLINSGNLCFLNSTLQALLSC PFV LL+ L+ R IPK G
Sbjct: 181 GDIAKEEKDPIKVVKNLVPRGLINSGNLCFLNSTLQALLSCSPFVQLLQQLKLRNIPKVG 240

Query: 241 YSTLNAFVEFISAFEVPS--SSVLSKDVAAFDVGKPFSPLMFDGILKNFSPDLPCGIKGR 300
           Y  L +F EF+S F+VPS  S +  KD A  ++G+PFSP+MF+ +LK+F+PD+P  I GR
Sbjct: 241 YPILTSFAEFVSDFDVPSSDSKLKKKDTAVLEIGRPFSPVMFESVLKSFTPDVPNSISGR 300

Query: 301 PRQEDAQEFLSFVMDRMHAELLKLDGTSSSMNGGKSFVVASAEDDEWETVGRKNKTAVMR 360
           PRQEDAQEFLSF+MD+MH EL+KL G S S NG +S +V+ AEDDEWETVG KNK+AV R
Sbjct: 301 PRQEDAQEFLSFIMDQMHDELVKLQGQSGSSNGVRSSLVSYAEDDEWETVGPKNKSAVTR 360

Query: 361 TQSFVPSELTEIFGGQLTSMVKARGNKPSATGQPFFSLHLDIYPQAVRTIEDALRLFSAP 420
           TQSF+PSEL++IFGGQL S+VKA GNK SAT QPF  LHLDI+P+AV TIEDAL LFSAP
Sbjct: 361 TQSFLPSELSDIFGGQLRSVVKAIGNKASATVQPFLLLHLDIHPEAVHTIEDALHLFSAP 420

Query: 421 ETLEGYRSSAAGKAGVVSASKSVKIQKLSKIMILHLKRFGYGSHGSTKLNKSVHFPLELV 480
           E LEGYR+S AGK GVV+A KSVKIQ LSKIMILHL RF YGS GSTKL+K VHFPLELV
Sbjct: 421 EFLEGYRASTAGKTGVVTAKKSVKIQTLSKIMILHLMRFSYGSQGSTKLHKPVHFPLELV 480

Query: 481 LNRDLLVSSSTEGRKYELVATITHHGRESSKGHYTADVRYHNDQWLRFDDASVTAIGKDN 540
           L R+LLVSSSTEGRKYELVATITHHGRE SKGHYTAD RY N QWLRFDDASVTAIG   
Sbjct: 481 LGRELLVSSSTEGRKYELVATITHHGREPSKGHYTADARYPNGQWLRFDDASVTAIGTSK 540

BLAST of Cp4.1LG01g10260.1 vs. TAIR10
Match: AT4G30890.1 (AT4G30890.1 ubiquitin-specific protease 24)

HSP 1 Score: 493.4 bits (1269), Expect = 1.7e-139
Identity = 290/562 (51.60%), Postives = 373/562 (66.37%), Query Frame = 1

Query: 1   MSDSKVLLFGSFNEDETISWILPQSNINPRKLVDNV--NVQFGSLNVT-DGKSLGSSADS 60
           MS+ KV +FGSF E ET S+   +   +P+   D    ++QFGSLN+  +  S+ ++ + 
Sbjct: 1   MSEKKVFVFGSFTEHETRSFFEQKPTKDPQNSKDKCVGSIQFGSLNLAAENSSVNTNGEL 60

Query: 61  EPKGPSGSSTGSITLESVDLAK-------DDTELETVQRRKIHSP---LESGVPKENGSN 120
           +     G+   + + E +D ++       +D++ +  ++  +  P   +++G+ KE    
Sbjct: 61  KKGEADGTVKSAGSQERLDASRPASSDKNNDSDAKLPRKNSLRVPEHVVQNGIIKEI--- 120

Query: 121 YNSNQSSSCTSGVT-ETNIDDTDALSSCVSNGQNN-----SLNRFSKLIAEDSMPNGSID 180
             S  + S  +GV  +T+    D LS  +S+G+++     S ++F  L  ED   + S  
Sbjct: 121 --SESNKSLNNGVAVKTDPIGLDNLS--MSDGESDPVYKASSSKFQALDNEDFSSDSSSG 180

Query: 181 HLQDIVLEENFRRASNVSVASSTKYLPRGLINSGNLCFLNSTLQALLSCPPFVDLLRNLR 240
            +Q     +   +    SV     + PRGLIN+GNLCFLN+TLQALLSC PFV LL+ ++
Sbjct: 181 SIQ----RKKNLKVPTESVPPVKDFTPRGLINAGNLCFLNATLQALLSCSPFVQLLQKIQ 240

Query: 241 NRAIPKAGYSTLNAFVEFISAFEVPSSSVLSKDVAAFDVGKPFSPLMFDGILKNFSPDLP 300
            + IPKA   TL AF EFIS  +VPSSS +  +V   + G+PF P MF+G+L+NF+PD+ 
Sbjct: 241 LQDIPKADSPTLAAFSEFISELDVPSSSSIRNNVTVVEAGRPFRPAMFEGVLRNFTPDVL 300

Query: 301 CGIKGRPRQEDAQEFLSFVMDRMHAELLKLDGTSSSMNGGKSFVVASAEDD--EWETVGR 360
             + GRPRQEDAQEFLSF+MD+MH ELLKL   S  +   KS V++SA DD  EWETVG 
Sbjct: 301 NNMSGRPRQEDAQEFLSFIMDQMHDELLKLKEQSPKVTASKSSVISSANDDGDEWETVGP 360

Query: 361 KNKTAVMRTQSFVPSELTEIFGGQLTSMVKARGNKPSATGQPFFSLHLDIYPQAVRTIED 420
           KNK+AV RTQSFVPSEL+EIFGGQL S+VKA+G K SAT QP+  LHLDI+P  V+ IED
Sbjct: 361 KNKSAVTRTQSFVPSELSEIFGGQLKSVVKAKGTKASATVQPYLLLHLDIHPDGVQGIED 420

Query: 421 ALRLFSAPETLEGYRSSAAGKAGVVSASKSVKIQKLSKIMILHLKRFGYGSHGSTKLNKS 480
           AL LFSA E LEGYR+S  GK GVVSASKS+KIQKLSKIMILHL RF YGS GSTKL K 
Sbjct: 421 ALHLFSAQEDLEGYRASVTGKTGVVSASKSIKIQKLSKIMILHLMRFSYGSQGSTKLRKG 480

Query: 481 VHFPLELVLNRDLLVSSSTEGRKYELVATITHHGRESSKGHYTADVRYHNDQWLRFDDAS 540
           V FPLEL LNR  LVS S E  +YELVATITHHG + SKGHYT D R  N QWLRFDDAS
Sbjct: 481 VKFPLELNLNRSHLVSLSNESLRYELVATITHHGWDPSKGHYTTDARRKNGQWLRFDDAS 540

Query: 541 VTAIGKDNVLHDRAYVLFYKRV 542
           VT IG   VLHD+AYVLFYK+V
Sbjct: 541 VTPIGTKLVLHDQAYVLFYKQV 551

BLAST of Cp4.1LG01g10260.1 vs. TAIR10
Match: AT3G14400.1 (AT3G14400.1 ubiquitin-specific protease 25)

HSP 1 Score: 111.3 bits (277), Expect = 1.9e-24
Identity = 104/358 (29.05%), Postives = 157/358 (43.85%), Query Frame = 1

Query: 188 PRGLINSGNLCFLNSTLQALLSCPPFVDLLRNLRNRAIPKAGYSTLNAFVEFISAFEVPS 247
           P GL N GN C+LNS LQ L   PP       L N  +     S  + +V+     + P 
Sbjct: 23  PLGLRNLGNTCYLNSVLQCLTFTPP-------LANFCLTHKHSSHCDTYVDGERKRDCPF 82

Query: 248 SSVLSKDVAAFDVGKPF-SPLMFDGILKNFSPDLPCGIKGRPRQEDAQEFLSFVMDRMHA 307
             V  +   +  V     +P      LK F+     G     RQEDA EFL +V+D  H 
Sbjct: 83  CIVEKRIARSLSVDLTTDAPNKISSCLKIFAEHFKLG-----RQEDAHEFLRYVIDACHN 142

Query: 308 ELLKLDGTSSSMNGGKSFVVASAEDDEWETVGRKNKTAVMRTQSFVPSELTEIFGGQLTS 367
             L+L       NG + F                N  +V++          EIFGG L S
Sbjct: 143 TSLRLK--KLRYNGNEPF----------------NGNSVVK----------EIFGGALQS 202

Query: 368 MVKARG-NKPSATGQPFFSLHLDIYPQAVRTIEDALRLFSAPETLEG---YRSSAAGKAG 427
            VK       S        + L+I   +  +++++L+ F   E L+G   YR  +  K  
Sbjct: 203 QVKCLSCGAESNKADEIMDISLEILQSS--SVKESLQKFFQSEILDGNNKYRCESCEK-- 262

Query: 428 VVSASKSVKIQKLSKIMILHLKRFGYGSHGSTKLNKSVHFPLELVLNRDLLVSSSTEGRK 487
           +V+A K + I +   I+++ LKRFG G  G  K++K++ F   LVL+  +  +S     +
Sbjct: 263 LVTARKQMSILQAPNILVIQLKRFG-GIFGG-KIDKAISFGEILVLSNFMSKASKDPQPE 322

Query: 488 YELVATITHHGRESSKGHYTADVRYHNDQWLRFDDASVTAIGKDNVLHDRAYVLFYKR 541
           Y+L   I H G     GHY A V+    +W   +D+ V+      VL ++AY+LF+ R
Sbjct: 323 YKLFGIIVHSGFSPESGHYYAYVKDSLGRWYCCNDSFVSLSTLQEVLSEKAYILFFSR 334

BLAST of Cp4.1LG01g10260.1 vs. TAIR10
Match: AT1G17110.2 (AT1G17110.2 ubiquitin-specific protease 15)

HSP 1 Score: 104.8 bits (260), Expect = 1.7e-22
Identity = 102/360 (28.33%), Postives = 154/360 (42.78%), Query Frame = 1

Query: 188 PRGLINSGNLCFLNSTLQALLSCPPFVD-LLRNLRNRAIPKAGYSTLNAFVEFISAFEVP 247
           PRGL+N GN C+ N+ LQ+L    P V  LLR   +R+     +  +    + +      
Sbjct: 441 PRGLVNCGNSCYANAVLQSLTCTKPLVAYLLRRSHSRSCSGKDWCLMCELEQHVMMLRES 500

Query: 248 SSSVLSKDVAAFDVGKPFSPLMFDGILKNFSPDLPCGIKGRPRQEDAQEFLSFVMDRMHA 307
                              PL    IL +    + C I G   QEDA EFL  ++  M +
Sbjct: 501 GG-----------------PLSASRILSHMR-SINCQI-GDGSQEDAHEFLRLLVASMQS 560

Query: 308 ELLKLDGTSSSMNGGKSFVVASAEDDEWETVGRKNKTAVMRTQSFVPSELTEIFGGQLTS 367
             L+  G  + ++                   R  +T +++           +FGG+L S
Sbjct: 561 ICLERLGGETKVDP------------------RLQETTLVQ----------HMFGGRLRS 620

Query: 368 MVKA-RGNKPSATGQPFFSLHLDIYPQAVRTIEDALRLFSAPETLEG---YRSSAAGKAG 427
            VK  R +  S   +    L L+IY   V +++DAL  F+ PE L+G   YR S    AG
Sbjct: 621 KVKCLRCDHESERYENIMDLTLEIYGW-VESLQDALTQFTRPEDLDGENMYRCSRC--AG 680

Query: 428 VVSASKSVKIQKLSKIMILHLKRFGYGSHGSTKLNKSVHFPLELVLNRDLLVSSSTEGRK 487
            V A K + I +   I+ + LKRF  G +G  K+NK + FP E++     +  +      
Sbjct: 681 YVRARKELSIHEAPNILTIVLKRFQEGRYG--KINKCISFP-EMLDMIPFMTRTGDVPPL 740

Query: 488 YELVATITHHG--RESSKGHYTADVRYHNDQWLRFDDASVTAIGKDNVLHDRAYVLFYKR 541
           Y L A I H      S  GHY + V+     W R DD+ +  +    V+ + AY+LFY R
Sbjct: 741 YMLYAVIVHLDTLNASFSGHYISYVKDLRGNWYRIDDSEIHPVPMTQVMSEGAYMLFYMR 747

BLAST of Cp4.1LG01g10260.1 vs. TAIR10
Match: AT5G46740.1 (AT5G46740.1 ubiquitin-specific protease 21)

HSP 1 Score: 101.3 bits (251), Expect = 1.9e-21
Identity = 101/356 (28.37%), Postives = 145/356 (40.73%), Query Frame = 1

Query: 190 GLINSGNLCFLNSTLQALLSCPPFVDLLRNLRNRAIPKAG---YSTLNAFVEFISAFEVP 249
           GL NSGN CF+ S LQ      P +D LR+         G   +  + A  + I      
Sbjct: 164 GLYNSGNTCFIASVLQCFTHTVPLIDSLRSFMYGNPCNCGNEKFCVMQALRDHI------ 223

Query: 250 SSSVLSKDVAAFDVGKPFSPLMFDGILKNFSPDLPCGIKGRPRQEDAQEFLSFVMDRMHA 309
                  ++A    G   +   F   L  FS D          QEDA EFL   +D++  
Sbjct: 224 -------ELALRSSGYGINIDRFRDNLTYFSSDFMIN-----HQEDAHEFLQSFLDKL-- 283

Query: 310 ELLKLDGTSSSMNGGKSFVVASAEDDEWETVGRKNKTAVMRTQSFVPSELTEIFGGQLTS 369
           E   LD                           KN+   + +Q    + +  +FGG L S
Sbjct: 284 ERCCLDP--------------------------KNQLGSVSSQDL--NIVDNVFGGGLMS 343

Query: 370 -MVKARGNKPSATGQPFFSLHLDIYPQAVRTIEDALRLFSAPETLEGYRSSAAGKAGVVS 429
            +     N  S T +P     L+I  + V T+  AL  F+  E LE   +    K  V  
Sbjct: 344 TLCCCNCNSVSNTFEPSLGWSLEI--EDVNTLWKALESFTCVEKLEDQLTCDNCKEKVTK 403

Query: 430 ASKSVKIQKLSKIMILHLKRFGYGSHGSTKLNKSVHFPLELVLNRDLLVSSSTE-GRKYE 489
             K ++  KL  +   HLKRF        K+   + FPLEL L+  +  +   E   +Y 
Sbjct: 404 -EKQLRFDKLPPVATFHLKRFTNDGVTMEKIFDHIEFPLELDLSPFMSSNHDPEVSTRYH 463

Query: 490 LVATITHHGRESSKGHYTADVRYHNDQWLRFDDASVTAIGKDNVLHDRAYVLFYKR 541
           L A + H G  ++ GHY++ VR   + W  FDD+ VT I ++ VL   AY+LFY R
Sbjct: 464 LYAFVEHIGIRATFGHYSSYVRSAPETWHNFDDSKVTRISEERVLSRPAYILFYAR 468

BLAST of Cp4.1LG01g10260.1 vs. TAIR10
Match: AT4G31670.1 (AT4G31670.1 ubiquitin-specific protease 18)

HSP 1 Score: 91.7 bits (226), Expect = 1.5e-18
Identity = 120/443 (27.09%), Postives = 184/443 (41.53%), Query Frame = 1

Query: 106 SNYNSNQSSSCTS-GVTETNIDDTDALSSCVSNGQNNSLNRFSKLIAEDSMPNGSIDHLQ 165
           S+++S    +C   G+T       + L    S   ++S +  + LI+E      S+   +
Sbjct: 88  SDWSSGHQRNCRDYGITTLTPSAKNGLRFRASPFGDSSASSIA-LISERGQNKSSLKPRE 147

Query: 166 DIVLEENFRRASNVSVASSTKYLPRGLINSGNLCFLNSTLQALLSCPPFVD-LLRNLRNR 225
            +   E F    N     + +  P GL+N GN CF N  LQ L    P V  LL     R
Sbjct: 148 VLFPYEEFVEYFNWD---NPELAPCGLMNCGNSCFANVILQCLSWTRPLVAYLLEKGHKR 207

Query: 226 AIPKAGYSTLNAFVEFISAFEVPSSSVLSKDVAAFDVGKPFSPLMFDGILKNFSPDLPCG 285
              +  +  L    EF +  E  S S             PFSP+     L N       G
Sbjct: 208 ECMRNDWCFL---CEFQTHVERASQSRF-----------PFSPMNIISRLTNIG-----G 267

Query: 286 IKGRPRQEDAQEFLSFVMDRMHAELLKLDGTSSSMNGGKSFVVASAEDDEWETVGRKNKT 345
             G  RQEDA EF+ + +D M +  L          GG+  V             R  +T
Sbjct: 268 TLGYGRQEDAHEFMRYAIDMMQSVCL-------DEFGGEKIVPP-----------RSQET 327

Query: 346 AVMRTQSFVPSELTEIFGGQLTSMVKARG-NKPSATGQPFFSLHLDIYPQAVRTIEDALR 405
            +++           IFGG L S V+    N  S   +    L ++++  A  ++E+ L 
Sbjct: 328 TLIQY----------IFGGLLQSQVQCTVCNHVSDQYENMMDLIVEMHGDA-GSLEECLD 387

Query: 406 LFSAPETLEGYRSSAAGKAG-VVSASKSVKIQKLSKIMILHLKRFGYGSHGSTKLNKSVH 465
            F+A E L G       +    V A K + I++   I+ + LKR+  G +G  KLNK + 
Sbjct: 388 QFTAEEWLHGDNMYKCDRCSDYVKACKRLTIRRAPNILTIALKRYQGGRYG--KLNKRIS 447

Query: 466 FPLELVLNRDLLVSSSTEGRK-YELVATITHHGRESSK--GHYTADVRYHNDQWLRFDDA 525
           FP  L LN    +S   +G   Y+L A I H    ++   GHY   ++     W R DD+
Sbjct: 448 FPETLDLNP--YMSEGGDGSDVYKLYAVIVHLDMLNASFFGHYICYIKDFCGNWYRIDDS 474

Query: 526 SVTAIGKDNVLHDRAYVLFYKRV 542
            + ++  ++VL  RAY+L Y R+
Sbjct: 508 EIESVELEDVLSQRAYMLLYSRI 474

BLAST of Cp4.1LG01g10260.1 vs. NCBI nr
Match: gi|778700759|ref|XP_011654912.1| (PREDICTED: ubiquitin carboxyl-terminal hydrolase 24 [Cucumis sativus])

HSP 1 Score: 899.4 bits (2323), Expect = 3.0e-258
Identity = 466/542 (85.98%), Postives = 495/542 (91.33%), Query Frame = 1

Query: 1   MSDSKVLLFGSFNEDETISWILPQSNINPRKLVDNVNVQFGSLNVTDGKSLGSSADSEPK 60
           MSDSKVLLFGSF EDET SW+ P+ N++P +LV+NVNVQFGSLN TDGKSLGSSADSE K
Sbjct: 1   MSDSKVLLFGSFTEDETNSWMPPKLNVSPGRLVNNVNVQFGSLNFTDGKSLGSSADSELK 60

Query: 61  GPSGSSTGSITLESVDLAKDDTELETVQRRKIHSPLESGVPKENGSNYNSNQSSSCTSGV 120
           GPSGSSTGSIT  S DLA+DDTELE VQR + HSPLES VPKENGSNYNSN+S SC++GV
Sbjct: 61  GPSGSSTGSITFGSTDLARDDTELEIVQRSESHSPLESEVPKENGSNYNSNKSFSCSNGV 120

Query: 121 TETNIDDTDALSSCVSNGQ-NNSLNRFSKLIAEDSMPNGSIDHLQDIVLEENFRRASNVS 180
           + T IDD DA S CVSNG  NNSLN+FS+LIAED   NGSIDHL + VL+ENFRRASNVS
Sbjct: 121 STTKIDDIDASSLCVSNGHHNNSLNQFSRLIAEDIKENGSIDHLPENVLKENFRRASNVS 180

Query: 181 VASSTKYLPRGLINSGNLCFLNSTLQALLSCPPFVDLLRNLRNRAIPKAGYSTLNAFVEF 240
           V SST  LPRGLINSGNLCFLNSTLQALLSCPPFVDLLRNL+NR IPK GYSTL AFVEF
Sbjct: 181 VTSSTTLLPRGLINSGNLCFLNSTLQALLSCPPFVDLLRNLQNREIPKVGYSTLTAFVEF 240

Query: 241 ISAFEVPSSSVLSKDVAAFDVGKPFSPLMFDGILKNFSPDLPCGIKGRPRQEDAQEFLSF 300
           ISA EVPSS+VL++DVAA DVGKPF PLMFDG+LKNFSPDLP GI GRPRQEDAQEFLSF
Sbjct: 241 ISALEVPSSTVLNRDVAASDVGKPFIPLMFDGVLKNFSPDLPSGILGRPRQEDAQEFLSF 300

Query: 301 VMDRMHAELLKLDGTSSSMNGGKSFVVASAEDDEWETVGRKNKTAVMRTQSFVPSELTEI 360
           VMDRMHAELLKLDG SSS NGGKSFVVASAEDDEWETVGRKN+TAVMRTQSFVPSEL+EI
Sbjct: 301 VMDRMHAELLKLDGKSSSTNGGKSFVVASAEDDEWETVGRKNRTAVMRTQSFVPSELSEI 360

Query: 361 FGGQLTSMVKARGNKPSATGQPFFSLHLDIYPQAVRTIEDALRLFSAPETLEGYRSSAAG 420
           FGGQLTSMVKA+GNKPSAT QPF SLHLDI P AVRTIEDALRLFSAPETLEGYR S+AG
Sbjct: 361 FGGQLTSMVKAKGNKPSATLQPFLSLHLDICPDAVRTIEDALRLFSAPETLEGYRPSSAG 420

Query: 421 KAGVVSASKSVKIQKLSKIMILHLKRFGYGSHGSTKLNKSVHFPLELVLNRDLLVSSSTE 480
           KAGVV+ASKSVKIQK SKIMILHLKRFGYGSHGSTKLNK VHFPLELVLNRDLLVSSSTE
Sbjct: 421 KAGVVAASKSVKIQKQSKIMILHLKRFGYGSHGSTKLNKPVHFPLELVLNRDLLVSSSTE 480

Query: 481 GRKYELVATITHHGRESSKGHYTADVRYHNDQWLRFDDASVTAIGKDNVLHDRAYVLFYK 540
           GRKYELVATITHHGRESSKGHYTADVRYHN+QWLRFDDASVTAIGK+NVLHDRAYVLFYK
Sbjct: 481 GRKYELVATITHHGRESSKGHYTADVRYHNNQWLRFDDASVTAIGKNNVLHDRAYVLFYK 540

Query: 541 RV 542
           +V
Sbjct: 541 QV 542

BLAST of Cp4.1LG01g10260.1 vs. NCBI nr
Match: gi|659090146|ref|XP_008445861.1| (PREDICTED: ubiquitin carboxyl-terminal hydrolase 24 [Cucumis melo])

HSP 1 Score: 897.1 bits (2317), Expect = 1.5e-257
Identity = 462/542 (85.24%), Postives = 494/542 (91.14%), Query Frame = 1

Query: 1   MSDSKVLLFGSFNEDETISWILPQSNINPRKLVDNVNVQFGSLNVTDGKSLGSSADSEPK 60
           MSDSKVLLFGSF EDET SW+ P+ N++P +LV+NVNVQFGSLN TDGKS GSSADSE K
Sbjct: 1   MSDSKVLLFGSFTEDETNSWMPPKLNVSPGRLVNNVNVQFGSLNFTDGKSSGSSADSELK 60

Query: 61  GPSGSSTGSITLESVDLAKDDTELETVQRRKIHSPLESGVPKENGSNYNSNQSSSCTSGV 120
           GPSGSSTGSIT  S DLA+DDTE+E VQ  K HSPLES  PKENG+NYNS+++ SC++GV
Sbjct: 61  GPSGSSTGSITFGSTDLARDDTEVEIVQSSKSHSPLESEAPKENGNNYNSSKNFSCSNGV 120

Query: 121 TETNIDDTDALSSCVSNGQ-NNSLNRFSKLIAEDSMPNGSIDHLQDIVLEENFRRASNVS 180
           + T IDD DA S CVSNG  NNSLN+FS+LIAED M NGSIDHLQ+ VL+ENFRRASNVS
Sbjct: 121 STTKIDDIDASSLCVSNGHHNNSLNQFSRLIAEDIMENGSIDHLQENVLKENFRRASNVS 180

Query: 181 VASSTKYLPRGLINSGNLCFLNSTLQALLSCPPFVDLLRNLRNRAIPKAGYSTLNAFVEF 240
           V SST  LPRGLINSGNLCFLNSTLQALLSCPPFVDLLRNL+NR IPK GYSTL AFVEF
Sbjct: 181 VTSSTTLLPRGLINSGNLCFLNSTLQALLSCPPFVDLLRNLKNREIPKVGYSTLTAFVEF 240

Query: 241 ISAFEVPSSSVLSKDVAAFDVGKPFSPLMFDGILKNFSPDLPCGIKGRPRQEDAQEFLSF 300
           ISA EVPSS+V ++DVAAFDVGKPFSPLMFDG+LKNFSPDLP GI GRPRQEDAQEFLSF
Sbjct: 241 ISALEVPSSTVPNRDVAAFDVGKPFSPLMFDGVLKNFSPDLPSGILGRPRQEDAQEFLSF 300

Query: 301 VMDRMHAELLKLDGTSSSMNGGKSFVVASAEDDEWETVGRKNKTAVMRTQSFVPSELTEI 360
           VMDRMHAELLKLDG SSS NGGKSFVVASAEDDEWETVGRKNKTAVMRTQSFVPSEL+EI
Sbjct: 301 VMDRMHAELLKLDGKSSSTNGGKSFVVASAEDDEWETVGRKNKTAVMRTQSFVPSELSEI 360

Query: 361 FGGQLTSMVKARGNKPSATGQPFFSLHLDIYPQAVRTIEDALRLFSAPETLEGYRSSAAG 420
           F G+L SMVKA+GNKPS T QPFFSLHLDIYP AVRTIEDALRLFSAPETLEGYR SAAG
Sbjct: 361 FWGELASMVKAKGNKPSGTQQPFFSLHLDIYPDAVRTIEDALRLFSAPETLEGYRPSAAG 420

Query: 421 KAGVVSASKSVKIQKLSKIMILHLKRFGYGSHGSTKLNKSVHFPLELVLNRDLLVSSSTE 480
           KAGVV+ASKS+KIQK SKIMILHLKRFGYGSHGSTKLNK VHFPLELVLNRDLLVSSSTE
Sbjct: 421 KAGVVAASKSMKIQKQSKIMILHLKRFGYGSHGSTKLNKPVHFPLELVLNRDLLVSSSTE 480

Query: 481 GRKYELVATITHHGRESSKGHYTADVRYHNDQWLRFDDASVTAIGKDNVLHDRAYVLFYK 540
           GRKYELVATITHHGRESSKGHYTADVRYHN+QWLRFDDASVTAIGK+NVLHDRAYVLFYK
Sbjct: 481 GRKYELVATITHHGRESSKGHYTADVRYHNNQWLRFDDASVTAIGKNNVLHDRAYVLFYK 540

Query: 541 RV 542
           +V
Sbjct: 541 QV 542

BLAST of Cp4.1LG01g10260.1 vs. NCBI nr
Match: gi|645251193|ref|XP_008231566.1| (PREDICTED: ubiquitin carboxyl-terminal hydrolase 24 [Prunus mume])

HSP 1 Score: 609.8 bits (1571), Expect = 4.7e-171
Identity = 330/542 (60.89%), Postives = 391/542 (72.14%), Query Frame = 1

Query: 1   MSDSKVLLFGSFNEDETISWILPQSNINPRKLVDNVNVQFGSLNVTDGKSLGSSADSEPK 60
           MSDSK+ +FGSF+EDET S +  QS     K V+   +QFGS+N     S G S + E  
Sbjct: 1   MSDSKLFVFGSFSEDETRSLLQKQSPGKAEKPVEKNILQFGSINFVTKISSGES-NGESS 60

Query: 61  GPSGSSTGSITLESVDLAKDDTELETVQRRKIHSPLESGVPKENGSNYNSNQSSSCTSGV 120
            P  S  G   ++         E+E V+      P     P ENG   N    S+ ++GV
Sbjct: 61  RPQNSVKGLSKVQPFTSLNKQNEVEAVKAANDSLPASLTTPIENGCTDNYKNGSAHSNGV 120

Query: 121 TETNIDDTDALSSCVSNGQNNSLNRFSKLIAEDSMPNGSIDHLQDIVLEENFRRASNVSV 180
            E   D+ D  S  +SN +    N+FS L  ++   NG +D L    ++   ++  N  V
Sbjct: 121 KEATKDNIDVASLPLSNNEGGLSNQFSSLELQNREQNGCVDDLSASKVKGELQKCLNGPV 180

Query: 181 ASSTKYLPRGLINSGNLCFLNSTLQALLSCPPFVDLLRNLRNRAIPKAGYSTLNAFVEFI 240
           A ST  LPRGLINSGNLCFLN+TLQALLSC PFV LL+ LR R +PK GY TL AF EF+
Sbjct: 181 AVSTVLLPRGLINSGNLCFLNATLQALLSCSPFVQLLQELRTRKVPKVGYPTLGAFAEFV 240

Query: 241 SAFEVPS-SSVLSKDVAAFDVGKPFSPLMFDGILKNFSPDLPCGIKGRPRQEDAQEFLSF 300
           S F++PS SS  +KD +    G+PFSP MF+G+LKNF+PD+P  I GRPRQEDAQEFLSF
Sbjct: 241 SEFDMPSGSSSKNKDASVLVTGRPFSPAMFEGVLKNFTPDVPTSISGRPRQEDAQEFLSF 300

Query: 301 VMDRMHAELLKLDGTSSSMNGGKSFVVASAEDDEWETVGRKNKTAVMRTQSFVPSELTEI 360
           +MD+MH ELLKL+G  SS+NG KS +V+SAE+DEWETVG KN +AV RTQSFVPSEL++I
Sbjct: 301 IMDQMHDELLKLEGQPSSINGRKSSLVSSAEEDEWETVGPKNTSAVTRTQSFVPSELSDI 360

Query: 361 FGGQLTSMVKARGNKPSATGQPFFSLHLDIYPQAVRTIEDALRLFSAPETLEGYRSSAAG 420
           FGGQL S+VKARGNK SAT QPF  LHLDIYP+AVRTIEDAL+LFSAPETLEGYR+SAAG
Sbjct: 361 FGGQLKSVVKARGNKASATVQPFLLLHLDIYPEAVRTIEDALKLFSAPETLEGYRTSAAG 420

Query: 421 KAGVVSASKSVKIQKLSKIMILHLKRFGYGSHGSTKLNKSVHFPLELVLNRDLLVSSSTE 480
            AGVVSASKS+KIQ LSKIMILHL RFGYGS GSTKL+K VHFPLELVL R+LLVS +TE
Sbjct: 421 MAGVVSASKSIKIQTLSKIMILHLMRFGYGSQGSTKLHKPVHFPLELVLGRELLVSPTTE 480

Query: 481 GRKYELVATITHHGRESSKGHYTADVRYHNDQWLRFDDASVTAIGKDNVLHDRAYVLFYK 540
           GRKY+LVATITHHGRE SKGHYT D  Y N QWLRFDDASVTAIG   VLHD+AYVL YK
Sbjct: 481 GRKYKLVATITHHGREPSKGHYTTDALYTNGQWLRFDDASVTAIGTGKVLHDQAYVLIYK 540

Query: 541 RV 542
           ++
Sbjct: 541 QL 541

BLAST of Cp4.1LG01g10260.1 vs. NCBI nr
Match: gi|1009129706|ref|XP_015881911.1| (PREDICTED: ubiquitin carboxyl-terminal hydrolase 24 [Ziziphus jujuba])

HSP 1 Score: 594.3 bits (1531), Expect = 2.1e-166
Identity = 321/542 (59.23%), Postives = 384/542 (70.85%), Query Frame = 1

Query: 1   MSDSKVLLFGSFNEDETISWILPQSNINPRKLVDNVNVQFGSLNVTDGKSLGSSADSEPK 60
           MSDSK+ +FGSF EDET S ++  ++ + +K  +   +QFGSLN    KSL  S + +  
Sbjct: 1   MSDSKLFVFGSFTEDETKSLLVKHASRDSKKPAEKKVLQFGSLNFVAEKSL-DSFEGQSS 60

Query: 61  GPSGSSTGSITLESVDLAKDDTELETVQRRKIHSPLESGVPKENGSNYNSNQSSSCTSGV 120
               +  G    +S D    + E++ V+    +S      PKENG   +S   S   +GV
Sbjct: 61  TKQNNLEGKTQFQSSDFLTKNNEVKCVKTADDNSSGAFASPKENGYVSDSTHVSPGCNGV 120

Query: 121 TETNIDDTDALSSCVSNGQNNSLNRFSKLIAEDSMPNGSIDHLQDIVLEENFRRASNVSV 180
            E   D  D  SS      +  LN+FS L       NGS+D+L   + +E  R+ASN  V
Sbjct: 121 KEAVTDTVDLTSSLEFQKNDGLLNKFSHLELHHEEQNGSVDNLSVSLSDEELRKASNGPV 180

Query: 181 ASSTKYLPRGLINSGNLCFLNSTLQALLSCPPFVDLLRNLRNRAIPKAGYSTLNAFVEFI 240
                 LPRGL+NSGNLCFLN+TLQALLSC PFV LL+ ++ + IPK GY TL AFVEF+
Sbjct: 181 KVCKNLLPRGLVNSGNLCFLNATLQALLSCSPFVQLLQEIQTQNIPKVGYPTLTAFVEFV 240

Query: 241 SAFEVPSSSVLSK-DVAAFDVGKPFSPLMFDGILKNFSPDLPCGIKGRPRQEDAQEFLSF 300
           S FE+P      K +    DVG PF P MF+ +LK F+PD+P  I GRPRQEDAQEFLSF
Sbjct: 241 SEFEMPLGGNSKKTETNILDVGMPFRPAMFEAVLKKFTPDVPSSISGRPRQEDAQEFLSF 300

Query: 301 VMDRMHAELLKLDGTSSSMNGGKSFVVASAEDDEWETVGRKNKTAVMRTQSFVPSELTEI 360
           +MD+MH ELLK +G SSS+ G KS +V+SAEDDEWETVGR+N++AV RTQSFVPSEL+ I
Sbjct: 301 IMDQMHDELLKHEGQSSSIRGSKSSLVSSAEDDEWETVGRRNRSAVTRTQSFVPSELSAI 360

Query: 361 FGGQLTSMVKARGNKPSATGQPFFSLHLDIYPQAVRTIEDALRLFSAPETLEGYRSSAAG 420
           FGGQL S+VKARG K SAT QPF  LHLDIYPQAV TIEDAL+LFSAPETLEGYR+SA G
Sbjct: 361 FGGQLRSLVKARGTKASATVQPFLLLHLDIYPQAVCTIEDALKLFSAPETLEGYRTSATG 420

Query: 421 KAGVVSASKSVKIQKLSKIMILHLKRFGYGSHGSTKLNKSVHFPLELVLNRDLLVSSSTE 480
           KAG+V+ASKS+KIQ LSKIMILHL RF YGS GSTKL+K VHFPLE VL R+LLVS S E
Sbjct: 421 KAGIVAASKSIKIQSLSKIMILHLMRFSYGSQGSTKLHKPVHFPLEFVLGRELLVSPSAE 480

Query: 481 GRKYELVATITHHGRESSKGHYTADVRYHNDQWLRFDDASVTAIGKDNVLHDRAYVLFYK 540
           GR+YELVATITHHGRE SKGHYTAD RY N QWLRFDDASVTAI    VLHD+AYVLFYK
Sbjct: 481 GRRYELVATITHHGREPSKGHYTADARYKNGQWLRFDDASVTAISASKVLHDQAYVLFYK 540

Query: 541 RV 542
           ++
Sbjct: 541 QL 541

BLAST of Cp4.1LG01g10260.1 vs. NCBI nr
Match: gi|694327070|ref|XP_009354416.1| (PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like isoform X1 [Pyrus x bretschneideri])

HSP 1 Score: 589.3 bits (1518), Expect = 6.6e-165
Identity = 319/545 (58.53%), Postives = 392/545 (71.93%), Query Frame = 1

Query: 1   MSDSKVLLFGSFNEDETISWILPQSNINPRKLVDNVN---VQFGSLNVTDGKSLGSSADS 60
           MSDSK+L+FGSF+EDET S +L QS +   K  + V    +QFGS+N    K      + 
Sbjct: 1   MSDSKLLVFGSFSEDETRSLLLKQSPVKGFKAENPVEKNVLQFGSINFVTAKP-SVQFNG 60

Query: 61  EPKGPSGSSTGSITLESVDLAKDDTELETVQRRKIHSPLESGVPKENGSNYNSNQSSSCT 120
           E  G   S      L+ +       E++ V+    + P+ S  P ENG   N    S+ +
Sbjct: 61  ESSGQKSSLKAPTKLQPLISVNKQDEVKAVKAVDGNLPVSSAAPAENGCTDNYVNCSAHS 120

Query: 121 SGVTETNIDDTDALSSCVSNGQNNSLNRFSKLIAEDSMPNGSIDHLQDIVLEENFRRASN 180
           +GV E   D+ +  S  +S  +    N+FS L  ++   NGS+D L    ++   ++ASN
Sbjct: 121 NGVKEVTTDNVNLTSLPLSKDEGVLSNQFSSLELQNREQNGSVDDLSVSKIKGELQKASN 180

Query: 181 VSVASSTKYLPRGLINSGNLCFLNSTLQALLSCPPFVDLLRNLRNRAIPKAGYSTLNAFV 240
             V  S   LPRGLINSGNLCFLN+TLQALLSC PFV LL+ LR R +PK GY TL+AF 
Sbjct: 181 APVTVSKSLLPRGLINSGNLCFLNATLQALLSCSPFVQLLQELRTREVPKVGYPTLSAFA 240

Query: 241 EFISAFEVPS-SSVLSKDVAAFDVGKPFSPLMFDGILKNFSPDLPCGIKGRPRQEDAQEF 300
           EF+S F++PS SS   KD +  + G+PFSP MF+G+LKNF+PD+P  I  RPRQEDAQEF
Sbjct: 241 EFVSEFDMPSGSSSKDKDTSVLETGRPFSPAMFEGVLKNFTPDVPTSISCRPRQEDAQEF 300

Query: 301 LSFVMDRMHAELLKLDGTSSSMNGGKSFVVASAEDDEWETVGRKNKTAVMRTQSFVPSEL 360
           LSF+MD+MH ELLKL+G S S+NG KS +++SAEDDE ET+G KN +AV RTQSFVPSEL
Sbjct: 301 LSFIMDQMHDELLKLEGQSPSINGRKSSLISSAEDDECETLGPKNTSAVTRTQSFVPSEL 360

Query: 361 TEIFGGQLTSMVKARGNKPSATGQPFFSLHLDIYPQAVRTIEDALRLFSAPETLEGYRSS 420
           ++IFGGQ  S+VKARGNK SAT QP+  LHLDIYP AV TIEDAL+L+SAPETLEGYR+S
Sbjct: 361 SDIFGGQSRSVVKARGNKASATVQPYLLLHLDIYPDAVCTIEDALKLYSAPETLEGYRTS 420

Query: 421 AAGKAGVVSASKSVKIQKLSKIMILHLKRFGYGSHGSTKLNKSVHFPLELVLNRDLLVSS 480
           AAGKAG+V+A+KS++I+ LSKIMILHLKRFGYGS GSTKLNK VHFPLELVL R+LLVS 
Sbjct: 421 AAGKAGIVTATKSIQIKTLSKIMILHLKRFGYGSQGSTKLNKPVHFPLELVLGRELLVSP 480

Query: 481 STEGRKYELVATITHHGRESSKGHYTADVRYHNDQWLRFDDASVTAIGKDNVLHDRAYVL 540
           +TEGRKY+LVATITHHG E SKGHYT D  Y N QWLRFDDASVTAIG   VLH++AYVL
Sbjct: 481 NTEGRKYKLVATITHHGSEPSKGHYTTDALYANGQWLRFDDASVTAIGTGKVLHNQAYVL 540

Query: 541 FYKRV 542
            YK+V
Sbjct: 541 IYKQV 544

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
UBP24_ARATH3.1e-13851.60Ubiquitin carboxyl-terminal hydrolase 24 OS=Arabidopsis thaliana GN=UBP24 PE=1 S... [more]
UBP10_RAT5.6e-5535.99Ubiquitin carboxyl-terminal hydrolase 10 OS=Rattus norvegicus GN=Usp10 PE=1 SV=1[more]
UB10B_XENLA3.6e-5434.61Ubiquitin carboxyl-terminal hydrolase 10-B OS=Xenopus laevis GN=usp10-b PE=2 SV=... [more]
UB10A_XENLA8.1e-5430.43Ubiquitin carboxyl-terminal hydrolase 10-A OS=Xenopus laevis GN=usp10-a PE=2 SV=... [more]
UBP10_MOUSE1.1e-5335.48Ubiquitin carboxyl-terminal hydrolase 10 OS=Mus musculus GN=Usp10 PE=1 SV=3[more]
Match NameE-valueIdentityDescription
A0A0A0KLJ2_CUCSA2.1e-25885.98Ubiquitin carboxyl-terminal hydrolase OS=Cucumis sativus GN=Csa_5G175860 PE=3 SV... [more]
A0A061FJS7_THECC1.0e-16458.73Ubiquitin-specific protease 24 isoform 1 OS=Theobroma cacao GN=TCM_042388 PE=3 S... [more]
A0A061FL09_THECC1.9e-16358.62Ubiquitin-specific protease 24 isoform 4 OS=Theobroma cacao GN=TCM_042388 PE=3 S... [more]
A0A061FLP2_THECC2.5e-16358.62Ubiquitin-specific protease 24 isoform 3 OS=Theobroma cacao GN=TCM_042388 PE=3 S... [more]
A0A0D2UFG1_GOSRA6.3e-16258.05Uncharacterized protein OS=Gossypium raimondii GN=B456_010G192300 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT4G30890.11.7e-13951.60 ubiquitin-specific protease 24[more]
AT3G14400.11.9e-2429.05 ubiquitin-specific protease 25[more]
AT1G17110.21.7e-2228.33 ubiquitin-specific protease 15[more]
AT5G46740.11.9e-2128.37 ubiquitin-specific protease 21[more]
AT4G31670.11.5e-1827.09 ubiquitin-specific protease 18[more]
Match NameE-valueIdentityDescription
gi|778700759|ref|XP_011654912.1|3.0e-25885.98PREDICTED: ubiquitin carboxyl-terminal hydrolase 24 [Cucumis sativus][more]
gi|659090146|ref|XP_008445861.1|1.5e-25785.24PREDICTED: ubiquitin carboxyl-terminal hydrolase 24 [Cucumis melo][more]
gi|645251193|ref|XP_008231566.1|4.7e-17160.89PREDICTED: ubiquitin carboxyl-terminal hydrolase 24 [Prunus mume][more]
gi|1009129706|ref|XP_015881911.1|2.1e-16659.23PREDICTED: ubiquitin carboxyl-terminal hydrolase 24 [Ziziphus jujuba][more]
gi|694327070|ref|XP_009354416.1|6.6e-16558.53PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like isoform X1 [Pyrus x bre... [more]
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006511ubiquitin-dependent protein catabolic process
GO:0016579protein deubiquitination
Vocabulary: Molecular Function
TermDefinition
GO:0036459thiol-dependent ubiquitinyl hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR018200USP_CS
IPR001394Peptidase_C19_UCH
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016579 protein deubiquitination
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0036459 thiol-dependent ubiquitinyl hydrolase activity
molecular_function GO:0008234 cysteine-type peptidase activity

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cp4.1LG01g10260Cp4.1LG01g10260gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cp4.1LG01g10260.1Cp4.1LG01g10260.1-proteinpolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cp4.1LG01g10260.1:five_prime_utr:001Cp4.1LG01g10260.1:five_prime_utr:001five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cp4.1LG01g10260.1:cds:001Cp4.1LG01g10260.1:cds:001CDS
Cp4.1LG01g10260.1:cds:002Cp4.1LG01g10260.1:cds:002CDS
Cp4.1LG01g10260.1:cds:003Cp4.1LG01g10260.1:cds:003CDS
Cp4.1LG01g10260.1:cds:004Cp4.1LG01g10260.1:cds:004CDS
Cp4.1LG01g10260.1:cds:005Cp4.1LG01g10260.1:cds:005CDS
Cp4.1LG01g10260.1:cds:006Cp4.1LG01g10260.1:cds:006CDS
Cp4.1LG01g10260.1:cds:007Cp4.1LG01g10260.1:cds:007CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cp4.1LG01g10260.1:three_prime_utr:001Cp4.1LG01g10260.1:three_prime_utr:001three_prime_UTR


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001394Peptidase C19, ubiquitin carboxyl-terminal hydrolasePFAMPF00443UCHcoord: 189..538
score: 4.7
IPR018200Ubiquitin specific protease, conserved sitePROSITEPS00972USP_1coord: 190..205
scor
IPR018200Ubiquitin specific protease, conserved sitePROSITEPS00973USP_2coord: 483..501
scor
NoneNo IPR availablePANTHERPTHR24006FAMILY NOT NAMEDcoord: 190..541
score: 4.4E-178coord: 88..102
score: 4.4E
NoneNo IPR availableunknownSSF54001Cysteine proteinasescoord: 185..540
score: 2.75