Cp4.1LG01g09160.1 (mRNA) Cucurbita pepo (Zucchini)

NameCp4.1LG01g09160.1
TypemRNA
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUnknown protein
LocationCp4.1LG01 : 4462866 .. 4464797 (-)
Sequence length416
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AGACGATGACAAAGATCCTCAACAAAGAATGCATAGGTATTAGGATCTCCATGAGAGTTTTTATTCATTTTATTATTATTTTTAAATGGTTATTCCAAATAATTTTTTATACCAACCTAATGTCTAAAAGAAATTAAAAATTAATATTATAATATTATAATAATATTATCTTCGACATAAAAACAATTGTAAACGTATTTTTAACTTAATATTACAATTATAGTCTCGTGATTTTAATATATAAATAATAATATTTATAATAAAGCTCAATTTTGAAATAAAAAAGCTATGAGCTAGAATAAAATTATAAAAATGAATTATAGGTAAAAGAAAAGCGGGGATAGGGCGGGTAATTGGGCTGATCCCCGTCCCCTTCCCCTTCCCGGTCCATGTAACGGAAGTCTGCCGACTTCCTCTCCATTCTCGGTTTAATCGAGATTTCCGATCGCAGGCCTCCTCTTCCCTAAGCTTCACACCAGCGGCGTTGACACTATGCTTCCAGAAGTCGTCCGGCGGGCCACATGCTCTGATTCTCGCCAATTTTAGGTTCGTCTTTGCACTTTGAAACTCTTGCAATAATCGATCAATCGCTCTGAATATGACTTGATTGAATATCTGCTGAAGTTGTGTGCTTCTTGGCCTGGTTTAATTGATTGTAATCATTCCAGATATTCCACATAATTGTGATCACTATTGCCCTCCTTCTTTAAAAACCAATCGCAAAAAATCAAATAAACTCAGGTAGTGGGGAAAGTATACGATCCATGCCTTCTTGGAGAACTTACATCTCCACATATTATGGCTTGAAGATTACTCTGTTTCCTACATCAAAGAAAAAAAATAAAAGCACAGGAAGTGTTAGTATCAATTCCTCTTTTTTGGATGTTAAGTTTGGCTGGGGTAGAATCGTTTAGGTTTTTCCACATTTCTTGAAATATTTTCATGCAAAAGAAAAAATTGGGTGTAATTAATGCCCATGGTTACTCAGAATGATGCCAAAAGTGGAGTTTTTTTTTAGATTGAAACTTCTGCTTGCGTTCTTACAACACACTTATACAAGCTTTACTTAAGTTCTTATTACTAAACAGCTCTCGTTTGTGTTCAACTCCTTCCCACTTCTCTAAGTTATAGCATTGCATTGCTCCCTTAGTTCTGACTAATTACTAATAGATAAACAAACAAGAGTTACCTAACGTTTGTGACTCAAACAGAGTGAATTCCAGCATCGGCAGCAGAATGGCAAGCAGCTGGTACAACATCTGAAATCTGGCTATCATGGCAGCCGAGGTAAATCCGCCAAGCCCTTTTTTACATTAAATTTGCTGTTTAAAGCAAAAGGATCAAAGTTTCATGAAGTAGCTGGTAGCTCCAATGTTTTCTTTTCGTTTCTTTAGGAATCAGTGGACAATGAACTCCACGTCACATTAAGTGGACTAAACAATAATTATCTGGTTTCTCTAGGAATCACTGGGGGATCATGGATTAACAAATCCTATCTAAATAAACTTGTTTTCTTTTTCAAAAAGGAAAGGAAGAATAGAATACCAGAAATGGCTACTAAGAAACTAAGAAGAAAGGGATGGTTAATGAGAGGCCTAAAAGAATTTAGTTGATGAGGTATGTATTGGGCCAGAGAAGGGAGATGACCCATGACCTAGCTGTAAGGAGCAGCACCAAACGAAAGTTTAATGCAGCCATGCAGAAGAAGTGCTACTGTTTTTGGGTTCATGACACATGTAATCGATCTCGCCCTCGCGGATCTGCACATTGTCAAAAAGAAATTCAGTGGCTGATGGAGCTGGTAGCATACAGTGAGTTGATTTAAATTTCTCCTTTCTATGTGATCTAGAGTTTCGTGGGGTTCTGTTTCCGACTGCAAAATTCATTGTTGGAGCTGGTAGAGACTTTGTATCAGCAAAGAGCAAAGGGGGA

mRNA sequence

AGACGATGACAAAGATCCTCAACAAAGAATGCATAGGTAAAAGAAAAGCGGGGATAGGGCGGGTAATTGGGCTGATCCCCGTCCCCTTCCCCTTCCCGGTCCATGTAACGGAAGTCTGCCGACTTCCTCTCCATTCTCGGTTTAATCGAGATTTCCGATCGCAGGCCTCCTCTTCCCTAAGCTTCACACCAGCGGCGTTGACACTATGCTTCCAGAAGTCGTCCGGCGGGCCACATGCTCTGATTCTCGCCAATTTTAGTGAATTCCAGCATCGGCAGCAGAATGGCAAGCAGCTGGTACAACATCTGAAATCTGGCTATCATGGCAGCCGAGAGTTTCGTGGGGTTCTGTTTCCGACTGCAAAATTCATTGTTGGAGCTGGTAGAGACTTTGTATCAGCAAAGAGCAAAGGGGGA

Coding sequence (CDS)

ATGACAAAGATCCTCAACAAAGAATGCATAGGTAAAAGAAAAGCGGGGATAGGGCGGGTAATTGGGCTGATCCCCGTCCCCTTCCCCTTCCCGGTCCATGTAACGGAAGTCTGCCGACTTCCTCTCCATTCTCGGTTTAATCGAGATTTCCGATCGCAGGCCTCCTCTTCCCTAAGCTTCACACCAGCGGCGTTGACACTATGCTTCCAGAAGTCGTCCGGCGGGCCACATGCTCTGATTCTCGCCAATTTTAGTGAATTCCAGCATCGGCAGCAGAATGGCAAGCAGCTGGTACAACATCTGAAATCTGGCTATCATGGCAGCCGAGAGTTTCGTGGGGTTCTGTTTCCGACTGCAAAATTCATTGTTGGAGCTGGTAGAGACTTTGTATCAGCAAAGAGCAAAGGGGGA

Protein sequence

MTKILNKECIGKRKAGIGRVIGLIPVPFPFPVHVTEVCRLPLHSRFNRDFRSQASSSLSFTPAALTLCFQKSSGGPHALILANFSEFQHRQQNGKQLVQHLKSGYHGSREFRGVLFPTAKFIVGAGRDFVSAKSKGG
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cp4.1LG01g09160Cp4.1LG01g09160gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cp4.1LG01g09160.1:five_prime_utr:001Cp4.1LG01g09160.1:five_prime_utr:001five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cp4.1LG01g09160.1:cds:001Cp4.1LG01g09160.1:cds:001CDS
Cp4.1LG01g09160.1:cds:002Cp4.1LG01g09160.1:cds:002CDS
Cp4.1LG01g09160.1:cds:003Cp4.1LG01g09160.1:cds:003CDS
Cp4.1LG01g09160.1:cds:004Cp4.1LG01g09160.1:cds:004CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cp4.1LG01g09160.1Cp4.1LG01g09160.1-proteinpolypeptide