Cp4.1LG01g00130.1 (mRNA) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g00130.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	WRKY protein
Location	Cp4.1LG01 : 3759854 .. 3760802 (-)
Sequence length	552

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAATGGATGGTGACATTCATAATTCACATGATATGGCAAGTTCTAGTACTGTCAATTACCAAAGCTCTGATGCTGCTGCTGAAATTGATTGGGTTGGGATTTTTGGTGGTTCCTCTGATGTGAGTTTGGAAATGGAGAAGGGCAGTGGGGTTAGTGAGGGTGCAATAATGGCCATGGGGGACTGTAACTACCAGAATGAGAGTCATGTTCATGTTCATGGAGGGAAGAACAAAGGGAAAATGGCGATGGGAAAAAGAGGTGCAATTCCTAGGGTTGCTTTTCAGACAAGGAGCGCTGAGGATGTTCTTGACGATGGGTATCGATGGAGGAAATATGGTCAGAAGGCTGTCAAACATAGCACTCATCCTAGGTACCTTCTTTTAACTTTTAACGACGGTCAAAAGAGTGTTTTGTTTTCTTTCTCAACGATTGTAAGATCTCAGAACTGTTGTGAGATCTCACTGTTATCATTTTTATTAAAATGGGATAGTTTGAATAGTGATGATATGTGTTCATGAAAGGTTCAAAGATGATGACTTGTTATTGAGTATCTATTATGTCCTTGACGAGTATAAGAAAACCTTCGACTTTCACAAATAATACTTTTACTTTAGCCATTAAGTTAATATCAGTTAATAAGAGGAGGAGGTGAGGGATAACGATGGTGTTCATTCGCTTGAGATTATAATCTTTTTTTTTTTCTTTCGTTATAAATGGAATGAATTTATTGGATTGAAATAATTTAATTGATTTTTTTTTTTTTTCAGGAGCTATTACCGATGTACGCATCATACATGCAACGTTAAGAAACAAATTCAACGGCATTCCAAGGATCCAACCATAGTGGTGACAACATATGAAGGGATTCATAACCATCCATCTGAAAAATTAATGGAGACTCTAACCCCTCTTCTCAAGCAATTGCAGTTCCTTTCTGGCATTTAG

mRNA sequence

ATGGTAATGGATGGTGACATTCATAATTCACATGATATGGCAAGTTCTAGTACTGTCAATTACCAAAGCTCTGATGCTGCTGCTGAAATTGATTGGGTTGGGATTTTTGGTGGTTCCTCTGATGTGAGTTTGGAAATGGAGAAGGGCAGTGGGGTTAGTGAGGGTGCAATAATGGCCATGGGGGACTGTAACTACCAGAATGAGAGTCATGTTCATGTTCATGGAGGGAAGAACAAAGGGAAAATGGCGATGGGAAAAAGAGGTGCAATTCCTAGGGTTGCTTTTCAGACAAGGAGCGCTGAGGATGTTCTTGACGATGGGTATCGATGGAGGAAATATGGTCAGAAGGCTGTCAAACATAGCACTCATCCTAGGAGCTATTACCGATGTACGCATCATACATGCAACGTTAAGAAACAAATTCAACGGCATTCCAAGGATCCAACCATAGTGGTGACAACATATGAAGGGATTCATAACCATCCATCTGAAAAATTAATGGAGACTCTAACCCCTCTTCTCAAGCAATTGCAGTTCCTTTCTGGCATTTAG

Coding sequence (CDS)

ATGGTAATGGATGGTGACATTCATAATTCACATGATATGGCAAGTTCTAGTACTGTCAATTACCAAAGCTCTGATGCTGCTGCTGAAATTGATTGGGTTGGGATTTTTGGTGGTTCCTCTGATGTGAGTTTGGAAATGGAGAAGGGCAGTGGGGTTAGTGAGGGTGCAATAATGGCCATGGGGGACTGTAACTACCAGAATGAGAGTCATGTTCATGTTCATGGAGGGAAGAACAAAGGGAAAATGGCGATGGGAAAAAGAGGTGCAATTCCTAGGGTTGCTTTTCAGACAAGGAGCGCTGAGGATGTTCTTGACGATGGGTATCGATGGAGGAAATATGGTCAGAAGGCTGTCAAACATAGCACTCATCCTAGGAGCTATTACCGATGTACGCATCATACATGCAACGTTAAGAAACAAATTCAACGGCATTCCAAGGATCCAACCATAGTGGTGACAACATATGAAGGGATTCATAACCATCCATCTGAAAAATTAATGGAGACTCTAACCCCTCTTCTCAAGCAATTGCAGTTCCTTTCTGGCATTTAG

Protein sequence

MVMDGDIHNSHDMASSSTVNYQSSDAAAEIDWVGIFGGSSDVSLEMEKGSGVSEGAIMAMGDCNYQNESHVHVHGGKNKGKMAMGKRGAIPRVAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRHSKDPTIVVTTYEGIHNHPSEKLMETLTPLLKQLQFLSGI

Homology

[Close]

BLAST of Cp4.1LG01g00130.1 vs. Swiss-Prot
Match: WRK56_ARATH (Probable WRKY transcription factor 56 OS=Arabidopsis thaliana GN=WRKY56 PE=2 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 4.1e-42
Identity = 85/140 (60.71%), Postives = 106/140 (75.71%), Query Frame = 1


Query: 44  LEMEKGSGVSEGAIMAMGDCNYQNESHVHVHGGKNKGKMAMGKRGAIPRVAFQTRSAEDV 103
           LE  +G G   G +++    N  N S  + +  K KGK  +    A+ R+AF TRS +DV
Sbjct: 61  LENFRGGGGEMGGLVS----NNSNNSDHNKNCNKGKGKRTL----AMQRIAFHTRSDDDV 120

Query: 104 LDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRHSKDPTIVVTTYEGIHNHPS 163
           LDDGYRWRKYGQK+VK++ HPRSYYRCT+HTCNVKKQ+QR +KDP +VVTTYEG+HNHP 
Sbjct: 121 LDDGYRWRKYGQKSVKNNAHPRSYYRCTYHTCNVKKQVQRLAKDPNVVVTTYEGVHNHPC 180

Query: 164 EKLMETLTPLLKQLQFLSGI 184
           EKLMETL+PLL+QLQFLS +
Sbjct: 181 EKLMETLSPLLRQLQFLSRV 192

[Close]

BLAST of Cp4.1LG01g00130.1 vs. Swiss-Prot
Match: WRK24_ARATH (Probable WRKY transcription factor 24 OS=Arabidopsis thaliana GN=WRKY24 PE=2 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 1.2e-41
Identity = 79/104 (75.96%), Postives = 90/104 (86.54%), Query Frame = 1


Query: 79  KGKMAMGKRGA-IPRVAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNV 138
           KGK    KR   +PR+AF TRS +DVLDDGYRWRKYGQK+VKH+ HPRSYYRCT+HTCNV
Sbjct: 71  KGKELKEKRSRKVPRIAFHTRSDDDVLDDGYRWRKYGQKSVKHNAHPRSYYRCTYHTCNV 130

Query: 139 KKQIQRHSKDPTIVVTTYEGIHNHPSEKLMETLTPLLKQLQFLS 182
           KKQ+QR +KDP +VVTTYEG+HNHP EKLMETL PLL+QLQFLS
Sbjct: 131 KKQVQRLAKDPNVVVTTYEGVHNHPCEKLMETLNPLLRQLQFLS 174

[Close]

BLAST of Cp4.1LG01g00130.1 vs. Swiss-Prot
Match: WRK43_ARATH (Probable WRKY transcription factor 43 OS=Arabidopsis thaliana GN=WRKY43 PE=1 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 6.3e-35
Identity = 68/91 (74.73%), Postives = 80/91 (87.91%), Query Frame = 1


Query: 91  PRVAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRHSKDPTI 150
           PR +F+T+S  D+LDDGYRWRKYGQK+VK+S +PRSYYRCT H CNVKKQ+QR SK+ +I
Sbjct: 16  PRFSFRTKSDADILDDGYRWRKYGQKSVKNSLYPRSYYRCTQHMCNVKKQVQRLSKETSI 75

Query: 151 VVTTYEGIHNHPSEKLMETLTPLLKQLQFLS 182
           V TTYEGIHNHP E+LM+TLTPLL QLQFLS
Sbjct: 76  VETTYEGIHNHPCEELMQTLTPLLHQLQFLS 106

[Close]

BLAST of Cp4.1LG01g00130.1 vs. Swiss-Prot
Match: WRK75_ARATH (Probable WRKY transcription factor 75 OS=Arabidopsis thaliana GN=WRKY75 PE=2 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.2e-28
Identity = 62/106 (58.49%), Postives = 76/106 (71.70%), Query Frame = 1


Query: 76  GKNKGKMAMGKRGAIPRVAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTC 135
           G +K   +  K+G   R AFQTRS  D+LDDGYRWRKYGQKAVK++  PRSYYRCT+  C
Sbjct: 38  GCSKSVESSKKKGKKQRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTYGGC 97

Query: 136 NVKKQIQRHSKDPTIVVTTYEGIHNHPSEKLMETLTPLLKQLQFLS 182
           NVKKQ+QR + D  +VVTTYEG+H+HP EK  E    +L Q+Q  S
Sbjct: 98  NVKKQVQRLTVDQEVVVTTYEGVHSHPIEKSTENFEHILTQMQIYS 143

[Close]

BLAST of Cp4.1LG01g00130.1 vs. Swiss-Prot
Match: WRK28_ARATH (Probable WRKY transcription factor 28 OS=Arabidopsis thaliana GN=WRKY28 PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 3.5e-25
Identity = 53/84 (63.10%), Postives = 65/84 (77.38%), Query Frame = 1


Query: 79  KGKMAMGKRGAIPRVAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVK 138
           K K    K+   PRV+F T+S  D L+DGYRWRKYGQKAVK+S +PRSYYRCT   CNVK
Sbjct: 146 KTKKTEVKKQREPRVSFMTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCNVK 205

Query: 139 KQIQRHSKDPTIVVTTYEGIHNHP 163
           K+++R  +DPT+V+TTYEG HNHP
Sbjct: 206 KRVERSFQDPTVVITTYEGQHNHP 229

[Close]

BLAST of Cp4.1LG01g00130.1 vs. TrEMBL
Match: A0A0A0KZP6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G050130 PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 5.2e-52
Identity = 123/203 (60.59%), Postives = 135/203 (66.50%), Query Frame = 1


Query: 4   DGDIHNSHDMASSSTVNYQSSDAAAEIDWVGIFGGSS-DVSLEMEK----GSGVSEGAIM 63
           D +I+     +SSS +N         IDW G+F  S    +LEM +    GS   +    
Sbjct: 3   DDNINQMGSTSSSSMMNN-----CEIIDWDGLFSSSCLSNNLEMVEKGICGSDQDDNNYY 62

Query: 64  AMGDCNYQ------NESHVHVHGGKN----------KGKMAMGKRGAI--PRVAFQTRSA 123
            MGD N         E  + + GG N          KGKM MGKR  I  PR+AFQT+S 
Sbjct: 63  PMGDNNNNVVIGGVKEGDIIIGGGHNNNNNNNNCKYKGKMVMGKRSTIASPRIAFQTKSV 122

Query: 124 EDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRHSKDPTIVVTTYEGIHN 183
           EDVLDDGYRWRKYGQKAVKHS HPRSYYRCTHHTCNVKKQIQRHSKDPTIVVTTYEGIHN
Sbjct: 123 EDVLDDGYRWRKYGQKAVKHSNHPRSYYRCTHHTCNVKKQIQRHSKDPTIVVTTYEGIHN 182

[Close]

BLAST of Cp4.1LG01g00130.1 vs. TrEMBL
Match: A0A0S3SZ32_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.09G160600 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 4.7e-45
Identity = 96/162 (59.26%), Postives = 117/162 (72.22%), Query Frame = 1


Query: 29  EIDWVGIFG------GSSDVSLEMEKGSGVSEGAIMAMGDCNY-QNESHVHVHGGKNKGK 88
           +IDWV +F       G++  ++E    S  S  +  ++      +N +HV     K K K
Sbjct: 14  DIDWVSLFSSQNSFLGNAKPTMEYASSSSSSSSSSSSLSCALIAENGAHVDEKNDKEKRK 73

Query: 89  MAMGKRGAIPRVAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQI 148
            + GK+   PR AFQTRSA+D+LDDGYRWRKYGQKAVK++ HPRSYYRCTHHTCNVKKQ+
Sbjct: 74  GSRGKKTTRPRFAFQTRSADDILDDGYRWRKYGQKAVKNNMHPRSYYRCTHHTCNVKKQV 133

Query: 149 QRHSKDPTIVVTTYEGIHNHPSEKLMETLTPLLKQLQFLSGI 184
           QR SKD +IVVTTYEGIHNHP EKLMETLTPLLKQ+QFLS +
Sbjct: 134 QRLSKDTSIVVTTYEGIHNHPCEKLMETLTPLLKQMQFLSSL 175

[Close]

BLAST of Cp4.1LG01g00130.1 vs. TrEMBL
Match: V7ARB8_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_010G104700g PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 8.9e-44
Identity = 97/160 (60.62%), Postives = 113/160 (70.62%), Query Frame = 1


Query: 29  EIDWVGIFGGSS----DVSLEMEKGSGVSEGAIMAMG-DCNY--QNESHVHVHGGKNKGK 88
           +IDWV +F G +    D    ME  S  S  +  +    C    +N +HV     K+K K
Sbjct: 29  DIDWVNLFSGHNNFLGDAKATMEYASSSSSSSSSSSSLSCALMAENGAHVDEKNDKDKRK 88

Query: 89  MAMGKRGAIPRVAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQI 148
               K+   PR AFQTRSA+D+LDDGYRWRKYGQKAVK++ HPRSYYRCTHHTCNVKKQ+
Sbjct: 89  GGRMKKTTRPRFAFQTRSADDILDDGYRWRKYGQKAVKNNMHPRSYYRCTHHTCNVKKQV 148

Query: 149 QRHSKDPTIVVTTYEGIHNHPSEKLMETLTPLLKQLQFLS 182
           QR SKD +IVVTTYEGIHNHP EKLMETL PLLKQ+QFLS
Sbjct: 149 QRLSKDTSIVVTTYEGIHNHPCEKLMETLAPLLKQMQFLS 188

[Close]

BLAST of Cp4.1LG01g00130.1 vs. TrEMBL
Match: A0A151UD12_CAJCA (Putative WRKY transcription factor 56 OS=Cajanus cajan GN=KK1_021486 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 2.0e-43
Identity = 97/157 (61.78%), Postives = 109/157 (69.43%), Query Frame = 1


Query: 29  EIDWVGIFGGSS----DVSLEMEKGSGVSEGAIMAMGDCNYQNESHVHVHGGKNKGKMAM 88
           +IDWV +F G +    D    ME  S  S  +  A+          +     K KGK   
Sbjct: 35  DIDWVNLFSGQNNFLGDAKAIMECTSSSSSSSSCAL----------MAEKSDKEKGKGGR 94

Query: 89  GKRGAIPRVAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRH 148
            K+   PR AFQTRSA+D+LDDGYRWRKYGQK VK+S HPRSYYRCTHHTCNVKKQ+QR 
Sbjct: 95  LKKTTQPRFAFQTRSADDILDDGYRWRKYGQKTVKNSIHPRSYYRCTHHTCNVKKQVQRL 154

Query: 149 SKDPTIVVTTYEGIHNHPSEKLMETLTPLLKQLQFLS 182
           SKD TIVVTTYEGIHNHP EKLMETLTPLLKQ+QFLS
Sbjct: 155 SKDTTIVVTTYEGIHNHPCEKLMETLTPLLKQMQFLS 181

[Close]

BLAST of Cp4.1LG01g00130.1 vs. TrEMBL
Match: G3FF75_9ROSI (WRKY transcription factor 23-1 (Fragment) OS=Dimocarpus longan PE=2 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 3.4e-43
Identity = 93/155 (60.00%), Postives = 111/155 (71.61%), Query Frame = 1


Query: 29  EIDWVGIFGG--SSDVSLEMEKGSGVSEGAIMAMGDCNYQNESHVHVHGGKNKGKMAMGK 88
           +IDWV +  G  SS + L  E G  +   +   M +   + E     +  K +    M K
Sbjct: 49  DIDWVTLLSGQSSSSLGLSHENGQVMESNSSSVMAENGVEEEKGSRENNNKMRKSSRM-K 108

Query: 89  RGAIPRVAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRHSK 148
           +   PR AFQTRSA+D+LDDGYRWRKYGQKAVK+S +PRSYYRCTHHTCNVKKQ+QR SK
Sbjct: 109 KATRPRFAFQTRSADDILDDGYRWRKYGQKAVKNSIYPRSYYRCTHHTCNVKKQVQRLSK 168

Query: 149 DPTIVVTTYEGIHNHPSEKLMETLTPLLKQLQFLS 182
           D +IVVTTYEGIHNHP EKLMETLTPLLKQ+QFL+
Sbjct: 169 DTSIVVTTYEGIHNHPCEKLMETLTPLLKQMQFLA 202

[Close]

BLAST of Cp4.1LG01g00130.1 vs. TAIR10
Match: AT1G64000.1 (AT1G64000.1 WRKY DNA-binding protein 56)

HSP 1 Score: 172.6 bits (436), Expect = 2.3e-43
Identity = 85/140 (60.71%), Postives = 106/140 (75.71%), Query Frame = 1


Query: 44  LEMEKGSGVSEGAIMAMGDCNYQNESHVHVHGGKNKGKMAMGKRGAIPRVAFQTRSAEDV 103
           LE  +G G   G +++    N  N S  + +  K KGK  +    A+ R+AF TRS +DV
Sbjct: 61  LENFRGGGGEMGGLVS----NNSNNSDHNKNCNKGKGKRTL----AMQRIAFHTRSDDDV 120

Query: 104 LDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRHSKDPTIVVTTYEGIHNHPS 163
           LDDGYRWRKYGQK+VK++ HPRSYYRCT+HTCNVKKQ+QR +KDP +VVTTYEG+HNHP 
Sbjct: 121 LDDGYRWRKYGQKSVKNNAHPRSYYRCTYHTCNVKKQVQRLAKDPNVVVTTYEGVHNHPC 180

Query: 164 EKLMETLTPLLKQLQFLSGI 184
           EKLMETL+PLL+QLQFLS +
Sbjct: 181 EKLMETLSPLLRQLQFLSRV 192

[Close]

BLAST of Cp4.1LG01g00130.1 vs. TAIR10
Match: AT5G41570.1 (AT5G41570.1 WRKY DNA-binding protein 24)

HSP 1 Score: 171.0 bits (432), Expect = 6.7e-43
Identity = 79/104 (75.96%), Postives = 90/104 (86.54%), Query Frame = 1


Query: 79  KGKMAMGKRGA-IPRVAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNV 138
           KGK    KR   +PR+AF TRS +DVLDDGYRWRKYGQK+VKH+ HPRSYYRCT+HTCNV
Sbjct: 71  KGKELKEKRSRKVPRIAFHTRSDDDVLDDGYRWRKYGQKSVKHNAHPRSYYRCTYHTCNV 130

Query: 139 KKQIQRHSKDPTIVVTTYEGIHNHPSEKLMETLTPLLKQLQFLS 182
           KKQ+QR +KDP +VVTTYEG+HNHP EKLMETL PLL+QLQFLS
Sbjct: 131 KKQVQRLAKDPNVVVTTYEGVHNHPCEKLMETLNPLLRQLQFLS 174

[Close]

BLAST of Cp4.1LG01g00130.1 vs. TAIR10
Match: AT2G46130.1 (AT2G46130.1 WRKY DNA-binding protein 43)

HSP 1 Score: 148.7 bits (374), Expect = 3.6e-36
Identity = 68/91 (74.73%), Postives = 80/91 (87.91%), Query Frame = 1


Query: 91  PRVAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRHSKDPTI 150
           PR +F+T+S  D+LDDGYRWRKYGQK+VK+S +PRSYYRCT H CNVKKQ+QR SK+ +I
Sbjct: 16  PRFSFRTKSDADILDDGYRWRKYGQKSVKNSLYPRSYYRCTQHMCNVKKQVQRLSKETSI 75

Query: 151 VVTTYEGIHNHPSEKLMETLTPLLKQLQFLS 182
           V TTYEGIHNHP E+LM+TLTPLL QLQFLS
Sbjct: 76  VETTYEGIHNHPCEELMQTLTPLLHQLQFLS 106

[Close]

BLAST of Cp4.1LG01g00130.1 vs. TAIR10
Match: AT5G13080.1 (AT5G13080.1 WRKY DNA-binding protein 75)

HSP 1 Score: 127.9 bits (320), Expect = 6.5e-30
Identity = 62/106 (58.49%), Postives = 76/106 (71.70%), Query Frame = 1


Query: 76  GKNKGKMAMGKRGAIPRVAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTC 135
           G +K   +  K+G   R AFQTRS  D+LDDGYRWRKYGQKAVK++  PRSYYRCT+  C
Sbjct: 38  GCSKSVESSKKKGKKQRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTYGGC 97

Query: 136 NVKKQIQRHSKDPTIVVTTYEGIHNHPSEKLMETLTPLLKQLQFLS 182
           NVKKQ+QR + D  +VVTTYEG+H+HP EK  E    +L Q+Q  S
Sbjct: 98  NVKKQVQRLTVDQEVVVTTYEGVHSHPIEKSTENFEHILTQMQIYS 143

[Close]

BLAST of Cp4.1LG01g00130.1 vs. TAIR10
Match: AT4G18170.1 (AT4G18170.1 WRKY DNA-binding protein 28)

HSP 1 Score: 116.3 bits (290), Expect = 2.0e-26
Identity = 53/84 (63.10%), Postives = 65/84 (77.38%), Query Frame = 1


Query: 79  KGKMAMGKRGAIPRVAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVK 138
           K K    K+   PRV+F T+S  D L+DGYRWRKYGQKAVK+S +PRSYYRCT   CNVK
Sbjct: 146 KTKKTEVKKQREPRVSFMTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCNVK 205

Query: 139 KQIQRHSKDPTIVVTTYEGIHNHP 163
           K+++R  +DPT+V+TTYEG HNHP
Sbjct: 206 KRVERSFQDPTVVITTYEGQHNHP 229

[Close]

BLAST of Cp4.1LG01g00130.1 vs. NCBI nr
Match: gi|659102201|ref|XP_008452004.1| (PREDICTED: probable WRKY transcription factor 43 [Cucumis melo])

HSP 1 Score: 217.6 bits (553), Expect = 1.8e-53
Identity = 129/207 (62.32%), Postives = 140/207 (67.63%), Query Frame = 1


Query: 4   DGDIHNSHDMASSSTVNYQSSDAAAEIDWVGIFGGS--SDVSLEM-EKGSGVSE--GAIM 63
           D +I+     +SSS +N         IDW G+F  S  S+ +LEM EKG   SE      
Sbjct: 3   DDNINQMGTTSSSSMMNN-----CEIIDWDGLFSSSCLSNNNLEMVEKGICGSEDDNNYY 62

Query: 64  AMGDCNYQN----------ESHVHVHGGKN---------KGKMAMGKRG---AIPRVAFQ 123
            MGD NY N          E  + + GG N         KG+M MGKR    A PR+AFQ
Sbjct: 63  PMGDSNYDNNNNVVIGGVKEGDIVISGGNNHNNNNNIKYKGRMVMGKRRSAMASPRIAFQ 122

Query: 124 TRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRHSKDPTIVVTTYE 183
           TRS EDVLDDGYRWRKYGQKAVKHS HPRSYYRCTHHTCNVKKQIQRHSKDPTIVVTTYE
Sbjct: 123 TRSVEDVLDDGYRWRKYGQKAVKHSNHPRSYYRCTHHTCNVKKQIQRHSKDPTIVVTTYE 182

[Close]

BLAST of Cp4.1LG01g00130.1 vs. NCBI nr
Match: gi|778690916|ref|XP_011653192.1| (PREDICTED: probable WRKY transcription factor 24 [Cucumis sativus])

HSP 1 Score: 212.2 bits (539), Expect = 7.5e-52
Identity = 123/203 (60.59%), Postives = 135/203 (66.50%), Query Frame = 1


Query: 4   DGDIHNSHDMASSSTVNYQSSDAAAEIDWVGIFGGSS-DVSLEMEK----GSGVSEGAIM 63
           D +I+     +SSS +N         IDW G+F  S    +LEM +    GS   +    
Sbjct: 3   DDNINQMGSTSSSSMMNN-----CEIIDWDGLFSSSCLSNNLEMVEKGICGSDQDDNNYY 62

Query: 64  AMGDCNYQ------NESHVHVHGGKN----------KGKMAMGKRGAI--PRVAFQTRSA 123
            MGD N         E  + + GG N          KGKM MGKR  I  PR+AFQT+S 
Sbjct: 63  PMGDNNNNVVIGGVKEGDIIIGGGHNNNNNNNNCKYKGKMVMGKRSTIASPRIAFQTKSV 122

Query: 124 EDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRHSKDPTIVVTTYEGIHN 183
           EDVLDDGYRWRKYGQKAVKHS HPRSYYRCTHHTCNVKKQIQRHSKDPTIVVTTYEGIHN
Sbjct: 123 EDVLDDGYRWRKYGQKAVKHSNHPRSYYRCTHHTCNVKKQIQRHSKDPTIVVTTYEGIHN 182

[Close]

BLAST of Cp4.1LG01g00130.1 vs. NCBI nr
Match: gi|965611866|dbj|BAT98005.1| (hypothetical protein VIGAN_09160600 [Vigna angularis var. angularis])

HSP 1 Score: 189.1 bits (479), Expect = 6.8e-45
Identity = 96/162 (59.26%), Postives = 117/162 (72.22%), Query Frame = 1


Query: 29  EIDWVGIFG------GSSDVSLEMEKGSGVSEGAIMAMGDCNY-QNESHVHVHGGKNKGK 88
           +IDWV +F       G++  ++E    S  S  +  ++      +N +HV     K K K
Sbjct: 14  DIDWVSLFSSQNSFLGNAKPTMEYASSSSSSSSSSSSLSCALIAENGAHVDEKNDKEKRK 73

Query: 89  MAMGKRGAIPRVAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQI 148
            + GK+   PR AFQTRSA+D+LDDGYRWRKYGQKAVK++ HPRSYYRCTHHTCNVKKQ+
Sbjct: 74  GSRGKKTTRPRFAFQTRSADDILDDGYRWRKYGQKAVKNNMHPRSYYRCTHHTCNVKKQV 133

Query: 149 QRHSKDPTIVVTTYEGIHNHPSEKLMETLTPLLKQLQFLSGI 184
           QR SKD +IVVTTYEGIHNHP EKLMETLTPLLKQ+QFLS +
Sbjct: 134 QRLSKDTSIVVTTYEGIHNHPCEKLMETLTPLLKQMQFLSSL 175

[Close]

BLAST of Cp4.1LG01g00130.1 vs. NCBI nr
Match: gi|951032425|ref|XP_014515390.1| (PREDICTED: probable WRKY transcription factor 24 [Vigna radiata var. radiata])

HSP 1 Score: 185.7 bits (470), Expect = 7.5e-44
Identity = 96/160 (60.00%), Postives = 114/160 (71.25%), Query Frame = 1


Query: 29  EIDWVGIFG------GSSDVSLEMEKGSGVSEGAIMAMGDCNY-QNESHVHVHGGKNKGK 88
           +IDWV +F       G+++ ++E    S  S     ++      +N SHV     K K K
Sbjct: 32  DIDWVSLFSSQNSFLGNANPTMEYASSSSSSSSTSSSLSCALIAENGSHVDEKNDKEKRK 91

Query: 89  MAMGKRGAIPRVAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQI 148
               K+   PR AFQTRSA+D+LDDGYRWRKYGQKAVK++ HPRSYYRCTHHTCNVKKQ+
Sbjct: 92  GGRVKKTTRPRFAFQTRSADDILDDGYRWRKYGQKAVKNNMHPRSYYRCTHHTCNVKKQV 151

Query: 149 QRHSKDPTIVVTTYEGIHNHPSEKLMETLTPLLKQLQFLS 182
           QR SKD +IVVTTYEGIHNHP EKLMETLTPLLKQ+QFLS
Sbjct: 152 QRLSKDTSIVVTTYEGIHNHPCEKLMETLTPLLKQMQFLS 191

[Close]

BLAST of Cp4.1LG01g00130.1 vs. NCBI nr
Match: gi|593265932|ref|XP_007135144.1| (hypothetical protein PHAVU_010G104700g [Phaseolus vulgaris])

HSP 1 Score: 184.9 bits (468), Expect = 1.3e-43
Identity = 97/160 (60.62%), Postives = 113/160 (70.62%), Query Frame = 1


Query: 29  EIDWVGIFGGSS----DVSLEMEKGSGVSEGAIMAMG-DCNY--QNESHVHVHGGKNKGK 88
           +IDWV +F G +    D    ME  S  S  +  +    C    +N +HV     K+K K
Sbjct: 29  DIDWVNLFSGHNNFLGDAKATMEYASSSSSSSSSSSSLSCALMAENGAHVDEKNDKDKRK 88

Query: 89  MAMGKRGAIPRVAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQI 148
               K+   PR AFQTRSA+D+LDDGYRWRKYGQKAVK++ HPRSYYRCTHHTCNVKKQ+
Sbjct: 89  GGRMKKTTRPRFAFQTRSADDILDDGYRWRKYGQKAVKNNMHPRSYYRCTHHTCNVKKQV 148

Query: 149 QRHSKDPTIVVTTYEGIHNHPSEKLMETLTPLLKQLQFLS 182
           QR SKD +IVVTTYEGIHNHP EKLMETL PLLKQ+QFLS
Sbjct: 149 QRLSKDTSIVVTTYEGIHNHPCEKLMETLAPLLKQMQFLS 188

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g00130.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
WRK56_ARATH	4.1e-42	60.71	Probable WRKY transcription factor 56 OS=Arabidopsis thaliana GN=WRKY56 PE=2 SV=...	[more]
WRK24_ARATH	1.2e-41	75.96	Probable WRKY transcription factor 24 OS=Arabidopsis thaliana GN=WRKY24 PE=2 SV=...	[more]
WRK43_ARATH	6.3e-35	74.73	Probable WRKY transcription factor 43 OS=Arabidopsis thaliana GN=WRKY43 PE=1 SV=...	[more]
WRK75_ARATH	1.2e-28	58.49	Probable WRKY transcription factor 75 OS=Arabidopsis thaliana GN=WRKY75 PE=2 SV=...	[more]
WRK28_ARATH	3.5e-25	63.10	Probable WRKY transcription factor 28 OS=Arabidopsis thaliana GN=WRKY28 PE=2 SV=...	[more]

BLAST of Cp4.1LG01g00130.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZP6_CUCSA	5.2e-52	60.59	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G050130 PE=4 SV=1	[more]
A0A0S3SZ32_PHAAN	4.7e-45	59.26	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.09G160600 PE=...	[more]
V7ARB8_PHAVU	8.9e-44	60.63	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_010G104700g PE=4 SV=1	[more]
A0A151UD12_CAJCA	2.0e-43	61.78	Putative WRKY transcription factor 56 OS=Cajanus cajan GN=KK1_021486 PE=4 SV=1	[more]
G3FF75_9ROSI	3.4e-43	60.00	WRKY transcription factor 23-1 (Fragment) OS=Dimocarpus longan PE=2 SV=1	[more]

BLAST of Cp4.1LG01g00130.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G64000.1	2.3e-43	60.71	WRKY DNA-binding protein 56	[more]
AT5G41570.1	6.7e-43	75.96	WRKY DNA-binding protein 24	[more]
AT2G46130.1	3.6e-36	74.73	WRKY DNA-binding protein 43	[more]
AT5G13080.1	6.5e-30	58.49	WRKY DNA-binding protein 75	[more]
AT4G18170.1	2.0e-26	63.10	WRKY DNA-binding protein 28	[more]

BLAST of Cp4.1LG01g00130.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659102201\|ref\|XP_008452004.1\|	1.8e-53	62.32	PREDICTED: probable WRKY transcription factor 43 [Cucumis melo]	[more]
gi\|778690916\|ref\|XP_011653192.1\|	7.5e-52	60.59	PREDICTED: probable WRKY transcription factor 24 [Cucumis sativus]	[more]
gi\|965611866\|dbj\|BAT98005.1\|	6.8e-45	59.26	hypothetical protein VIGAN_09160600 [Vigna angularis var. angularis]	[more]
gi\|951032425\|ref\|XP_014515390.1\|	7.5e-44	60.00	PREDICTED: probable WRKY transcription factor 24 [Vigna radiata var. radiata]	[more]
gi\|593265932\|ref\|XP_007135144.1\|	1.3e-43	60.63	hypothetical protein PHAVU_010G104700g [Phaseolus vulgaris]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0043565	sequence-specific DNA binding
GO:0003700	transcription factor activity, sequence-specific DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR003657	WRKY_dom

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG01g00130	Cp4.1LG01g00130	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG01g00130.1:cds:001	Cp4.1LG01g00130.1:cds:001	CDS
Cp4.1LG01g00130.1:cds:002	Cp4.1LG01g00130.1:cds:002	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG01g00130.1	Cp4.1LG01g00130.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003657	WRKY domain	GENE3D	G3DSA:2.20.25.80		coord: 91..163 score: 5.5
IPR003657	WRKY domain	PFAM	PF03106	WRKY	coord: 105..162 score: 4.7
IPR003657	WRKY domain	SMART	SM00774	WRKY_cls	coord: 104..163 score: 2.6
IPR003657	WRKY domain	PROFILE	PS50811	WRKY	coord: 99..164 score: 2
IPR003657	WRKY domain	unknown	SSF118290	WRKY DNA-binding domain	coord: 97..163 score: 4.18
None	No IPR available	PANTHER	PTHR31221	FAMILY NOT NAMED	coord: 58..181 score: 3.6
None	No IPR available	PANTHER	PTHR31221:SF7	WRKY TRANSCRIPTION FACTOR 24-RELATED	coord: 58..181 score: 3.6