Cp4.1LG00g09320.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCACTGGCTTTGGCGGCAATGGGAGTAGCAGTTGCAAGTACAAGTGCGACACTGCCGCCAATACTCTGCAATGGATAAAAGCCATCGCCGACTTCATTAGACCTTACTCGTTCCTGATCAATGCTCCCGTCGTCAATTTTTTTAAGGTTTGTTGATTTATTTTTTCATTCGCACAAGTTTTGGAATCTGCTTTGAGTGTAGCTTGTAATTTGATTTTGATTTTTCCTTTTCACTCGTGGATGTTCTTTTATGATTTACATCATGCTACTGCTTCCATTCTCTTTTACAGGATAGACTATGGGAAGCTGTTGATGAGGAATGGATGGAGTGCTTGCGCAAGGAACATGTGAAGAATCTGCTTCTAATTCCTTCTGGAGCTGTCCAGGTGCGTCTGTAATTGGAGAACATTTTTAGACTTGATTTTATTTCAATTAGCTTGTGTTTGAACGTTTGAAGCTTAGTTTTGAAGCTAGATTTGAGCTCACTTGTAAGATTTTTGTCCATAACAAAAGTACGCAGGTAGTATTTGACTGAATTGACAGTTACACTTTCTCAATGATCCATTATAAGCCTTATTTGGATATGTTTAGGACATAATCCTCTATATGCATGTTAATTTAGACATAATTGTCTGATTATCTGGATCAAAGTATAATATCGATCAAAATATTGATTCGTACCTGTCGAGTAATTTAAAAATATTCACGGAACTGAAATTGATCATTATTTGTAATAATAACGTCATTATTTTCAAAGTAGTTATTATCCGTGTTGGTATGTAGTTGGATGATTAATTCTATGGAAGAATGCTGAGACTGTACAATGACATATTGCATTGCATAAATCCAGTTTCAATTTCTGGGAAAATAGATGTGTAATGGATTGAATTTTATTGTTATTATTATTTTATTCTGAATCAGATACCATAAAGATTTCTGACTAACCTTGTGTTTGCTTGGGGAGCATATAAATCCGCTTATCAACATCTATAATTGATTAGTTGGGTTTCAAAATAAGGGTGAACTAAAAAAAAAACTCCCATATTTAGGGGTGTCGTTAACTAACTCCATATGTTGACGTCTTTTTTTTTTGTTCCTTTTAAAAATTGAATTAATTTTTTCATACTGTCAGTAGATTTCTTATTAAATATTGGTACATCCTTATGGGGCATGTGTGATGTCTTTGACTAATTAGATTAAATAGAACTGAAGTTATGAAATGGCAAGAACTCAGAAATGAAAAATGAGTGGCGAAATATGGCTAGAGTAAAAAAGGTTGATGATAGCCTTCTGCGTGTCACTGTATGTTATGATATATTTCTAAAAATGCATCATCGTTGTTGAGAAGTATCAGAGTACGAAAGTTATGAGCATTGGTCACAGGGGAGCGTTTTGTCTGGAAATATTGCTGATAGTTTAATCCATTTTAAGGAATTTATGGAACTATGTGATCTGCTTTTCTTTGTGTTTCTTGTTATGAGTGCATTTACTCTAATGTACTGAAGTCTAAGTTTCTGATTGACAAAATCTTTCAGGAATACTGGCCAGATTCACTAAAGAAATTTATCCGTACTTCAAGATCTCTTGCCTTTGGACGTGAACAAGCAGACTTGCAGATGGTAGTGCTTTTATGTTATACAGTTGATAGTTTCCGATTGATTATATAGATTTGCTGCGTATAGCAAGAAAAAGAAACATAGACTTGAAAATTGCATAATATCCATTATCCACTTCGACTCATATGTTACTTTCAAGAAGATTAGAGCTCGCTCCACTCAGGAAGTTCTCTTTCATTGAGCTGTCTTCTAAGCCTGAGATTCCAGCTATTATCAACCAAATTCCCTTATCCTTGAAACAATAAAGACTCACATTCAGTAATACAAAAGAATGTGCAAATTTTCTGATATCAGTCTCGTTCAAGGATAGAACAGAAGTATCTGAACATGGCATTTTAAAATGTGTTGATGACCTTATCTTACATAAGATTTCTGTAGATTTACCCCTTTTCCTTTTTTTTTTTGGATAAAAACTGGGAAGCTTCTTCTTGATCTTCACCCCTCAACTTTAGGAGTCTGGTCCCATTCGTATTCTTTTGTTGCTATTAGAATTATTTTTCACTAAGGACATGGATGGAGAGTTATTGACATTTAACCACCCTTTCTTTAAGATAGACTTCCTGTTATTAGTGTGTCTTGTTGGATTGAGACAAAGAGTGGTCCGTGGTTGGAGTATAATTAAGCTACTTTGAGGCCTGTTTGTAACTAACGGTTACTAGGAGTATGGAAAGGGAAGGTGTGAGTGGGTATCTATCCGGCTAATTTTATTTTATTTTATTTTATTTTATTTTTTAATTTTATATAAGAGGGAATTATTCCTTTGGACATTGTACTGGGAGATGGGAGAGCGAGATCTCTTGAATCGCACTTCTCTGTTTCTTTTTAATAATAAAGAACTGTCACTAACGTCATCCCACTTATGCGTGTCAAACAGAATGTTCCAGGTTGATTTTATCCATTTCTTAGTACCACAGTTGTGTATATTATTGCAGGTTCTACCTGGTTGGTGCATCGCTTCACTTAACACTGTTCTTTCTCAAGGCATGAATCAGAAGAAAAAACATGAAGTAGGTTATTGGGTCTTACATTTCCGAATGGAATACTTTATGCCTTTTCCAATTTACTAAGAGAGAGCTATCCTTGAGTGCGTGTTAAACAAATCATTTAAATTCAAAATCAGAGAGAAACATATCTATCAGACTAAATAAGTTAAAATCTAAATCAGTAACAAATTACTCTTATTTATGAAATAAAGTCCAAATATTCTCATTTTAATGTGAAACCCTCTTTCTTTTCAAAGCTTGACCATGATTTTTAAATTGAGGTTCTAATTCTTATGATCTTGTTTTCCTACGTGGGAGTCGAATTTCCTAGCATTAGTTTTCAATTTGGTGTAAAACTATGACCATTTAAATTGAATATGATGTATTTCATCTTTAACTTTGCATCCGGATATGATTTATGCTTGGTCCATTTTGTATGATACAATCTGTGGGTTTCATGGCTTGTCAAACGCGTTGATTCAATCTACAAATTGTGTTGTGATATATTATAACCAAAACATTTTCTATATGGTTCATTAAGAAATTTTTTAATGCTTCAACAGGTTGAAGTCCTTTCCGCCATTATTAGTTTGATTGCAAGTGACCTGAAAAGTCATGCAATTGTTGATGTTGGTGCTGGGCAGGTAACACTTACTTTCATTACTGTATGCAAGATGGGTAAGTTTGATTCTGCATCCAGCTTCTTTATATTAGACTGTACTAAAAAAAGAGTCATTCCACAGGGATGGGCTTAAACATCTTCCATTATTTTGGATCTATTAGGTTCCTTTCATTTTCTCCTAAAATGTATGGGAAAAAGTACTTCCTCAATTAAATATGTAAATTTCTTTATGAAATCAACTTAGTTGATTTTATGTTGTAGTACTTGAAGAAATGAACTTCACTTCCTTGCCTTTATGATCAATGTCTGAGAGGTAACTGAGTCTAGGATATTCCTGTACATACTTCTTCCACAGCAGCAACAAAATTCTATTCTTTCTAGGCTTCTAATTTAAGCATTTTCTGATAACTCCTTTTCTACATTTTAATTGAATCTCACTCATATTTTTTGAATGATTTATTCCTCTGTAATCTACTTTCTCTGTCGATCTGTTTTTTCTTCCATTATTGTTTCGGTGTATTCCTAAAAGGGTTTATGATCCATATAAATTCTTCTTACAACAAAAATTTCCATGTACTCGTATGCTCTATATAACGTTCTACTATTGCAAGTGCTTTCATACTTATGATCTTTTCTTGTTAGGGTTATTTAGCGCAAGTGCTTTCCTTCCATTACAAGCATTCAGTTCTTGCAATTGATGCTTGTTCTCATCATGGAAATGTGACAAGTGCACGTTCAGAACGGATTAAGAAGTATTACTCAGCACAGATTCGTAAATCTGGGTAAGGGTATAGAAAACGTTTTTAGGCAAACATTTTGTGTTGATGCGAGCAGATAGAATTAAAATGTTTTACTTTCATTTCTCCTATTTTTTTAAATCTCTTGGAAGCTATTTCTCTTATTTGTGTTTTCTTGAACTTGGTCCCATCTTCTATTGGTTATCTTAAGAACTTCTGGTTTCAAGGGAGTGATAATGAGATCAGCGAGAGCATCTACCACCCACACGGCAATTTATGAGGCCAAACTAAGCTCATACCCATTGTATTTATTCTTTTATAAAATGTTCCCTTCTGAAGACTGATATAAGTTATAGAAAAGTGTTATTATGTATCTACAAATCTCAGAGATCCACATTATTAAACTTTCTAGTCCTCTCACAACAACATAGAAATCACTTTTCAATTTTGATGAAACTCAAACCATCTTGGATTGAGAAATGGTTCTCGCATATTTCCATCTCGAAGAAGCCAGTCACTGATTTTGTATGTGGTTTCAGTCATTGTAACTTAGAGGGAAAGACTTCTGGATACTCAGGTGTATCTTAGAGGACTAAATGCAAACCTTTTTTTTTCTCTTGCCCTGCTTAAATGTTCTTAGTTTCTTACTAGACTAAAATAGTATTTTGGTTTCTACTTATTGTTTTTTTTAACTTAATATCTAAAAAATCATTACTCTTTTTCTAATTTCGCTGAACTCTTTACAGATTGGAAACCAACAATTTGAGACTGCCGAAGGCAATGACATTTCATGTATTATCCGTTGATGCATTAAAATCCCTTGCTAACATGTCACTACAAGACGATCATGCTGATAAGACAAGTGTGACTGGCGATGATCTAGAGAAAACCAATCGGCAGGAGTCAAAGGGTTTGTGCCGTTCAGGCAAAGAGCCTTCATTGGTTCTTGCTGGACTTCATGCTTGCGGTGATCTTTCAGTGATAATGCTCAGGTTAGAATTACATGATATTGAATTACTCTTTTTATTAAGATGTGTCAAATATACATTTCTTGAAAATGCAAAGTAG ATGGCCACTGGCTTTGGCGGCAATGGGAGTAGCAGTTGCAAGTACAAGTGCGACACTGCCGCCAATACTCTGCAATGGATAAAAGCCATCGCCGACTTCATTAGACCTTACTCGTTCCTGATCAATGCTCCCGTCGTCAATTTTTTTAAGGATAGACTATGGGAAGCTGTTGATGAGGAATGGATGGAGTGCTTGCGCAAGGAACATGTGAAGAATCTGCTTCTAATTCCTTCTGGAGCTGTCCAGTCTAAGTTTCTGATTGACAAAATCTTTCAGGAATACTGGCCAGATTCACTAAAGAAATTTATCCGTACTTCAAGATCTCTTGCCTTTGGACGTGAACAAGCAGACTTGCAGATGGTTCTACCTGGTTGGTGCATCGCTTCACTTAACACTGTTCTTTCTCAAGGCATGAATCAGAAGAAAAAACATGAAGTTGAAGTCCTTTCCGCCATTATTAGTTTGATTGCAAGTGACCTGAAAAGTCATGCAATTGTTGATGTTGGTGCTGGGCAGGGTTATTTAGCGCAAGTGCTTTCCTTCCATTACAAGCATTCAGTTCTTGCAATTGATGCTTGTTCTCATCATGGAAATGTGACAAGTGCACGTTCAGAACGGATTAAGAAGTATTACTCAGCACAGATTCGTAAATCTGGATTGGAAACCAACAATTTGAGACTGCCGAAGGCAATGACATTTCATGTATTATCCGTTGATGCATTAAAATCCCTTGCTAACATGTCACTACAAGACGATCATGCTGATAAGACAAGTGTGACTGGCGATGATCTAGAGAAAACCAATCGGCAGGAGTCAAAGGGTTTGTGCCGTTCAGGCAAAGAGCCTTCATTGGTTCTTGCTGGACTTCATGCTTGCGGTGATCTTTCAGTGATAATGCTCAGGTTAGAATTACATGATATTGAATTACTCTTTTTATTAAGATGTGTCAAATATACATTTCTTGAAAATGCAAAGTAG ATGGCCACTGGCTTTGGCGGCAATGGGAGTAGCAGTTGCAAGTACAAGTGCGACACTGCCGCCAATACTCTGCAATGGATAAAAGCCATCGCCGACTTCATTAGACCTTACTCGTTCCTGATCAATGCTCCCGTCGTCAATTTTTTTAAGGATAGACTATGGGAAGCTGTTGATGAGGAATGGATGGAGTGCTTGCGCAAGGAACATGTGAAGAATCTGCTTCTAATTCCTTCTGGAGCTGTCCAGTCTAAGTTTCTGATTGACAAAATCTTTCAGGAATACTGGCCAGATTCACTAAAGAAATTTATCCGTACTTCAAGATCTCTTGCCTTTGGACGTGAACAAGCAGACTTGCAGATGGTTCTACCTGGTTGGTGCATCGCTTCACTTAACACTGTTCTTTCTCAAGGCATGAATCAGAAGAAAAAACATGAAGTTGAAGTCCTTTCCGCCATTATTAGTTTGATTGCAAGTGACCTGAAAAGTCATGCAATTGTTGATGTTGGTGCTGGGCAGGGTTATTTAGCGCAAGTGCTTTCCTTCCATTACAAGCATTCAGTTCTTGCAATTGATGCTTGTTCTCATCATGGAAATGTGACAAGTGCACGTTCAGAACGGATTAAGAAGTATTACTCAGCACAGATTCGTAAATCTGGATTGGAAACCAACAATTTGAGACTGCCGAAGGCAATGACATTTCATGTATTATCCGTTGATGCATTAAAATCCCTTGCTAACATGTCACTACAAGACGATCATGCTGATAAGACAAGTGTGACTGGCGATGATCTAGAGAAAACCAATCGGCAGGAGTCAAAGGGTTTGTGCCGTTCAGGCAAAGAGCCTTCATTGGTTCTTGCTGGACTTCATGCTTGCGGTGATCTTTCAGTGATAATGCTCAGGTTAGAATTACATGATATTGAATTACTCTTTTTATTAAGATGTGTCAAATATACATTTCTTGAAAATGCAAAGTAG MATGFGGNGSSSCKYKCDTAANTLQWIKAIADFIRPYSFLINAPVVNFFKDRLWEAVDEEWMECLRKEHVKNLLLIPSGAVQSKFLIDKIFQEYWPDSLKKFIRTSRSLAFGREQADLQMVLPGWCIASLNTVLSQGMNQKKKHEVEVLSAIISLIASDLKSHAIVDVGAGQGYLAQVLSFHYKHSVLAIDACSHHGNVTSARSERIKKYYSAQIRKSGLETNNLRLPKAMTFHVLSVDALKSLANMSLQDDHADKTSVTGDDLEKTNRQESKGLCRSGKEPSLVLAGLHACGDLSVIMLRLELHDIELLFLLRCVKYTFLENAK
BLAST of Cp4.1LG00g09320.1 vs. Swiss-Prot
Match: RRNAD_RAT (Protein RRNAD1 OS=Rattus norvegicus GN=Rrnad1 PE=2 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 8.1e-09 Identity = 69/279 (24.73%), Postives = 114/279 (40.86%), Query Frame = 1
BLAST of Cp4.1LG00g09320.1 vs. Swiss-Prot
Match: MET25_HUMAN (Methyltransferase-like protein 25 OS=Homo sapiens GN=METTL25 PE=2 SV=2) HSP 1 Score: 61.6 bits (148), Expect = 1.8e-08 Identity = 33/93 (35.48%), Postives = 53/93 (56.99%), Query Frame = 1
BLAST of Cp4.1LG00g09320.1 vs. Swiss-Prot
Match: RRNAD_HUMAN (Protein RRNAD1 OS=Homo sapiens GN=RRNAD1 PE=2 SV=2) HSP 1 Score: 61.2 bits (147), Expect = 2.4e-08 Identity = 64/272 (23.53%), Postives = 115/272 (42.28%), Query Frame = 1
BLAST of Cp4.1LG00g09320.1 vs. Swiss-Prot
Match: RRNAD_BOVIN (Protein RRNAD1 OS=Bos taurus GN=RRNAD1 PE=2 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 6.9e-08 Identity = 66/276 (23.91%), Postives = 113/276 (40.94%), Query Frame = 1
BLAST of Cp4.1LG00g09320.1 vs. Swiss-Prot
Match: MET25_MOUSE (Methyltransferase-like protein 25 OS=Mus musculus GN=Mettl25 PE=2 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 4.5e-07 Identity = 34/102 (33.33%), Postives = 55/102 (53.92%), Query Frame = 1
BLAST of Cp4.1LG00g09320.1 vs. TrEMBL
Match: A0A0A0LB00_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G523070 PE=4 SV=1) HSP 1 Score: 494.6 bits (1272), Expect = 9.3e-137 Identity = 257/324 (79.32%), Postives = 276/324 (85.19%), Query Frame = 1
BLAST of Cp4.1LG00g09320.1 vs. TrEMBL
Match: V4TLJ7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021587mg PE=4 SV=1) HSP 1 Score: 349.4 bits (895), Expect = 4.8e-93 Identity = 177/289 (61.25%), Postives = 221/289 (76.47%), Query Frame = 1
BLAST of Cp4.1LG00g09320.1 vs. TrEMBL
Match: A0A0B0N7L2_GOSAR (Protein RRNAD1 OS=Gossypium arboreum GN=F383_06817 PE=4 SV=1) HSP 1 Score: 332.8 bits (852), Expect = 4.7e-88 Identity = 172/308 (55.84%), Postives = 223/308 (72.40%), Query Frame = 1
BLAST of Cp4.1LG00g09320.1 vs. TrEMBL
Match: M5WMN3_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa003763m2g PE=4 SV=1) HSP 1 Score: 332.0 bits (850), Expect = 8.0e-88 Identity = 173/293 (59.04%), Postives = 213/293 (72.70%), Query Frame = 1
BLAST of Cp4.1LG00g09320.1 vs. TrEMBL
Match: A0A059BP92_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F01450 PE=4 SV=1) HSP 1 Score: 330.9 bits (847), Expect = 1.8e-87 Identity = 171/296 (57.77%), Postives = 219/296 (73.99%), Query Frame = 1
BLAST of Cp4.1LG00g09320.1 vs. TAIR10
Match: AT1G16650.1 (AT1G16650.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein) HSP 1 Score: 311.6 bits (797), Expect = 5.7e-85 Identity = 164/306 (53.59%), Postives = 213/306 (69.61%), Query Frame = 1
BLAST of Cp4.1LG00g09320.1 vs. NCBI nr
Match: gi|659087113|ref|XP_008444279.1| (PREDICTED: protein RRNAD1 isoform X2 [Cucumis melo]) HSP 1 Score: 500.4 bits (1287), Expect = 2.4e-138 Identity = 259/319 (81.19%), Postives = 278/319 (87.15%), Query Frame = 1
BLAST of Cp4.1LG00g09320.1 vs. NCBI nr
Match: gi|778681503|ref|XP_011651526.1| (PREDICTED: protein RRNAD1 isoform X2 [Cucumis sativus]) HSP 1 Score: 495.0 bits (1273), Expect = 1.0e-136 Identity = 255/319 (79.94%), Postives = 277/319 (86.83%), Query Frame = 1
BLAST of Cp4.1LG00g09320.1 vs. NCBI nr
Match: gi|659087111|ref|XP_008444278.1| (PREDICTED: protein RRNAD1 isoform X1 [Cucumis melo]) HSP 1 Score: 495.0 bits (1273), Expect = 1.0e-136 Identity = 259/322 (80.43%), Postives = 278/322 (86.34%), Query Frame = 1
BLAST of Cp4.1LG00g09320.1 vs. NCBI nr
Match: gi|778681500|ref|XP_011651525.1| (PREDICTED: protein RRNAD1 isoform X1 [Cucumis sativus]) HSP 1 Score: 495.0 bits (1273), Expect = 1.0e-136 Identity = 255/319 (79.94%), Postives = 277/319 (86.83%), Query Frame = 1
BLAST of Cp4.1LG00g09320.1 vs. NCBI nr
Match: gi|659087115|ref|XP_008444280.1| (PREDICTED: methyltransferase-like protein 25 isoform X3 [Cucumis melo]) HSP 1 Score: 495.0 bits (1273), Expect = 1.0e-136 Identity = 259/322 (80.43%), Postives = 278/322 (86.34%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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