Cp4.1LG00g09160.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCATGGCCTCTCCTTCTATTCCCAATTCTCTCTTCTTGAACAGAACCTTCCACTCGCCTGCTCGCACATTCCGTACATGGCCGGTCTACGCATCCCAACCTCCCAACAACCGCCAAAGGCCTCCACCGGGCGTCGACACAAGAATTCATTGGCAAAATGATGAAGAAGGTTGGATTGGAGGCCCTAGGCCTTCCCAATCCCGGCGAGACCAGAAGGAGCAGAATAATAATAATAATAATAACGCGTTGGGTCCAAGTTTGGCCGATTTGCTCAATAACTCATCCGACTCTCACTACCAGTACGTGAGCTTGGCTAGCTGGCTGCATATGCTTCGTTAATTTCGTTTTGAATTTGATTGATGTTGGTATCATGGTTTGTTCTGTGTATATATGCGCGCAGGTTCTTAGGAGTCGGTGCTGAGGCTGACCTAGAAGAGATAAAAAGTGCGTATCGGAGATTGTCAAAGGAATATCATCCCGACACCACCTCTCTCCCTCTAAAAGCTGCGTCCGACAAATTTATGAAATTAAAACAAGTGTACGAGGTCCTCAGCAACGAAGAAAGCCGCAAGTTCTACGACTGGACGCTTGCTCAAGAAGAGGCAAGCCGCCAAGCTGATAAGCTGAGGATCAAGTTGGAAGATCCTTACGAGCAGGAGCTGCAAAGCTGGAAATCCACTCCAGATATGGTCGATCGCCTTGCTGGAAGGAACATGGACTTGAGTGATCAGGCCACCACAGCTCTTACCTTGGATATCCTTATCATTCTCTTTGCTATAGGCTGCATTGTGTATGTCCTCCTCTTTAAGGAACCATATTATTGA ATGGCCATGGCCTCTCCTTCTATTCCCAATTCTCTCTTCTTGAACAGAACCTTCCACTCGCCTGCTCGCACATTCCGTACATGGCCGGTCTACGCATCCCAACCTCCCAACAACCGCCAAAGGCCTCCACCGGGCGTCGACACAAGAATTCATTGGCAAAATGATGAAGAAGGTTGGATTGGAGGCCCTAGGCCTTCCCAATCCCGGCGAGACCAGAAGGAGCAGAATAATAATAATAATAATAACGCGTTGGGTCCAAGTTTGGCCGATTTGCTCAATAACTCATCCGACTCTCACTACCAGTTCTTAGGAGTCGGTGCTGAGGCTGACCTAGAAGAGATAAAAAGTGCGTATCGGAGATTGTCAAAGGAATATCATCCCGACACCACCTCTCTCCCTCTAAAAGCTGCGTCCGACAAATTTATGAAATTAAAACAAGTGTACGAGGTCCTCAGCAACGAAGAAAGCCGCAAGTTCTACGACTGGACGCTTGCTCAAGAAGAGGCAAGCCGCCAAGCTGATAAGCTGAGGATCAAGTTGGAAGATCCTTACGAGCAGGAGCTGCAAAGCTGGAAATCCACTCCAGATATGGTCGATCGCCTTGCTGGAAGGAACATGGACTTGAGTGATCAGGCCACCACAGCTCTTACCTTGGATATCCTTATCATTCTCTTTGCTATAGGCTGCATTGTGTATGTCCTCCTCTTTAAGGAACCATATTATTGA ATGGCCATGGCCTCTCCTTCTATTCCCAATTCTCTCTTCTTGAACAGAACCTTCCACTCGCCTGCTCGCACATTCCGTACATGGCCGGTCTACGCATCCCAACCTCCCAACAACCGCCAAAGGCCTCCACCGGGCGTCGACACAAGAATTCATTGGCAAAATGATGAAGAAGGTTGGATTGGAGGCCCTAGGCCTTCCCAATCCCGGCGAGACCAGAAGGAGCAGAATAATAATAATAATAATAACGCGTTGGGTCCAAGTTTGGCCGATTTGCTCAATAACTCATCCGACTCTCACTACCAGTTCTTAGGAGTCGGTGCTGAGGCTGACCTAGAAGAGATAAAAAGTGCGTATCGGAGATTGTCAAAGGAATATCATCCCGACACCACCTCTCTCCCTCTAAAAGCTGCGTCCGACAAATTTATGAAATTAAAACAAGTGTACGAGGTCCTCAGCAACGAAGAAAGCCGCAAGTTCTACGACTGGACGCTTGCTCAAGAAGAGGCAAGCCGCCAAGCTGATAAGCTGAGGATCAAGTTGGAAGATCCTTACGAGCAGGAGCTGCAAAGCTGGAAATCCACTCCAGATATGGTCGATCGCCTTGCTGGAAGGAACATGGACTTGAGTGATCAGGCCACCACAGCTCTTACCTTGGATATCCTTATCATTCTCTTTGCTATAGGCTGCATTGTGTATGTCCTCCTCTTTAAGGAACCATATTATTGA MAMASPSIPNSLFLNRTFHSPARTFRTWPVYASQPPNNRQRPPPGVDTRIHWQNDEEGWIGGPRPSQSRRDQKEQNNNNNNNALGPSLADLLNNSSDSHYQFLGVGAEADLEEIKSAYRRLSKEYHPDTTSLPLKAASDKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKLEDPYEQELQSWKSTPDMVDRLAGRNMDLSDQATTALTLDILIILFAIGCIVYVLLFKEPYY
BLAST of Cp4.1LG00g09160.1 vs. Swiss-Prot
Match: NDHT_ARATH (NAD(P)H-quinone oxidoreductase subunit T, chloroplastic OS=Arabidopsis thaliana GN=ndhT PE=1 SV=1) HSP 1 Score: 266.9 bits (681), Expect = 2.1e-70 Identity = 138/217 (63.59%), Postives = 170/217 (78.34%), Query Frame = 1
BLAST of Cp4.1LG00g09160.1 vs. Swiss-Prot
Match: DNAJ_HYDTT (Chaperone protein DnaJ OS=Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6) GN=dnaJ PE=3 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 1.1e-10 Identity = 40/97 (41.24%), Postives = 58/97 (59.79%), Query Frame = 1
BLAST of Cp4.1LG00g09160.1 vs. Swiss-Prot
Match: DNAJ_SYNP6 (Chaperone protein DnaJ OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=dnaJ PE=3 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 1.9e-10 Identity = 33/63 (52.38%), Postives = 43/63 (68.25%), Query Frame = 1
BLAST of Cp4.1LG00g09160.1 vs. Swiss-Prot
Match: DNAJ_GEOKA (Chaperone protein DnaJ OS=Geobacillus kaustophilus (strain HTA426) GN=dnaJ PE=3 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 2.4e-10 Identity = 32/63 (50.79%), Postives = 44/63 (69.84%), Query Frame = 1
BLAST of Cp4.1LG00g09160.1 vs. Swiss-Prot
Match: DNAJ_GEOSE (Chaperone protein DnaJ OS=Geobacillus stearothermophilus GN=dnaJ PE=3 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 3.2e-10 Identity = 32/63 (50.79%), Postives = 44/63 (69.84%), Query Frame = 1
BLAST of Cp4.1LG00g09160.1 vs. TrEMBL
Match: A0A0A0LT25_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042670 PE=4 SV=1) HSP 1 Score: 379.4 bits (973), Expect = 3.2e-102 Identity = 198/242 (81.82%), Postives = 213/242 (88.02%), Query Frame = 1
BLAST of Cp4.1LG00g09160.1 vs. TrEMBL
Match: A0A061EBG7_THECC (Chaperone DnaJ-domain superfamily protein OS=Theobroma cacao GN=TCM_011554 PE=4 SV=1) HSP 1 Score: 301.6 bits (771), Expect = 8.6e-79 Identity = 157/224 (70.09%), Postives = 185/224 (82.59%), Query Frame = 1
BLAST of Cp4.1LG00g09160.1 vs. TrEMBL
Match: A0A0F7H024_9ROSI (Chaperone DnaJ-domain superfamily protein (Fragment) OS=Melianthus villosus GN=NDHT PE=2 SV=1) HSP 1 Score: 297.7 bits (761), Expect = 1.2e-77 Identity = 151/221 (68.33%), Postives = 186/221 (84.16%), Query Frame = 1
BLAST of Cp4.1LG00g09160.1 vs. TrEMBL
Match: A0A059DAD9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A00085 PE=4 SV=1) HSP 1 Score: 294.3 bits (752), Expect = 1.4e-76 Identity = 150/213 (70.42%), Postives = 177/213 (83.10%), Query Frame = 1
BLAST of Cp4.1LG00g09160.1 vs. TrEMBL
Match: W9RNY0_9ROSA (Chaperone protein DnaJ OS=Morus notabilis GN=L484_025453 PE=4 SV=1) HSP 1 Score: 292.4 bits (747), Expect = 5.2e-76 Identity = 147/224 (65.62%), Postives = 179/224 (79.91%), Query Frame = 1
BLAST of Cp4.1LG00g09160.1 vs. TAIR10
Match: AT4G09350.1 (AT4G09350.1 Chaperone DnaJ-domain superfamily protein) HSP 1 Score: 266.9 bits (681), Expect = 1.2e-71 Identity = 138/217 (63.59%), Postives = 170/217 (78.34%), Query Frame = 1
BLAST of Cp4.1LG00g09160.1 vs. TAIR10
Match: AT3G17830.1 (AT3G17830.1 Molecular chaperone Hsp40/DnaJ family protein) HSP 1 Score: 65.5 bits (158), Expect = 5.2e-11 Identity = 32/63 (50.79%), Postives = 41/63 (65.08%), Query Frame = 1
BLAST of Cp4.1LG00g09160.1 vs. TAIR10
Match: AT1G80030.1 (AT1G80030.1 Molecular chaperone Hsp40/DnaJ family protein) HSP 1 Score: 63.9 bits (154), Expect = 1.5e-10 Identity = 31/67 (46.27%), Postives = 45/67 (67.16%), Query Frame = 1
BLAST of Cp4.1LG00g09160.1 vs. TAIR10
Match: AT2G22360.1 (AT2G22360.1 DNAJ heat shock family protein) HSP 1 Score: 60.5 bits (145), Expect = 1.7e-09 Identity = 29/63 (46.03%), Postives = 39/63 (61.90%), Query Frame = 1
BLAST of Cp4.1LG00g09160.1 vs. TAIR10
Match: AT4G39960.1 (AT4G39960.1 Molecular chaperone Hsp40/DnaJ family protein) HSP 1 Score: 58.9 bits (141), Expect = 4.9e-09 Identity = 29/62 (46.77%), Postives = 37/62 (59.68%), Query Frame = 1
BLAST of Cp4.1LG00g09160.1 vs. NCBI nr
Match: gi|659066817|ref|XP_008462782.1| (PREDICTED: dnaJ homolog subfamily B member 12 [Cucumis melo]) HSP 1 Score: 386.0 bits (990), Expect = 5.0e-104 Identity = 197/240 (82.08%), Postives = 213/240 (88.75%), Query Frame = 1
BLAST of Cp4.1LG00g09160.1 vs. NCBI nr
Match: gi|449439697|ref|XP_004137622.1| (PREDICTED: NAD(P)H-quinone oxidoreductase subunit T, chloroplastic isoform X1 [Cucumis sativus]) HSP 1 Score: 379.4 bits (973), Expect = 4.6e-102 Identity = 198/242 (81.82%), Postives = 213/242 (88.02%), Query Frame = 1
BLAST of Cp4.1LG00g09160.1 vs. NCBI nr
Match: gi|720093395|ref|XP_010246036.1| (PREDICTED: uncharacterized protein LOC104589413 [Nelumbo nucifera]) HSP 1 Score: 301.6 bits (771), Expect = 1.2e-78 Identity = 157/246 (63.82%), Postives = 192/246 (78.05%), Query Frame = 1
BLAST of Cp4.1LG00g09160.1 vs. NCBI nr
Match: gi|590699286|ref|XP_007045885.1| (Chaperone DnaJ-domain superfamily protein [Theobroma cacao]) HSP 1 Score: 301.6 bits (771), Expect = 1.2e-78 Identity = 157/224 (70.09%), Postives = 185/224 (82.59%), Query Frame = 1
BLAST of Cp4.1LG00g09160.1 vs. NCBI nr
Match: gi|702236724|ref|XP_010045171.1| (PREDICTED: dnaJ homolog subfamily B member 14-like [Eucalyptus grandis]) HSP 1 Score: 294.3 bits (752), Expect = 2.0e-76 Identity = 150/213 (70.42%), Postives = 177/213 (83.10%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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