Cp4.1LG00g04000.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAGGGTGCCTTCCTTGGTGGCATGCATATGTGTGTGTGTGTGTGTGGGGTAACATCTTCTCCTCTCTTCACATACTCTCCCTCCCTTTACTATAAATACTCTCCAACTCTGCTTCGAGTTTTATACCCACTAATCTATTAACTGAAGGCCACGCCATTCCAAATCGAGAGACAAAGAGACAGAGAGATAGTGATGAATAAGGGAATGATGAGCGGCAAACCCAATTTGAGGAAGACTAGAACTTTTTTCCTGCACAAGAACCAAACCTCGATGCAGCAGGCAATCATTCCGAACCAACCAGCTGAATCCGGAGAAGAGCATAATAATCATTATATTGAGAAAGAGAGCCCCCCGGGGGCGGTGAAATTCCCAGTGTCCCCTCAGCTGATGAATGGGGAACAGATGGTCCATTTCAGTCACCCTCGACACCGCCTGTCCCGGATGTGTAATCTGAACCTGTTTACGTGCGGCGGGTGCAAGGAGTACGGCGCCGGCAACGGATTCAGTTGCCAACAATGTGATTTCCAGCTCCACGACTTCTGCGCCTTCTCCCCTCCGGCCCTCAAGGCCCACCCCTTCCATTCCCACCACCAGCTTCTCTTTTACTCCAAGCCAGGTGTGTGTGCTATATACTATACTATACATGCAGGGTTGGGCATTCATTAATTAAGTTTCTTTTATGATGCAGTGAAAGGGGGCATCATGCAGTCCAAGTGCGACATTTGCGCGAAGCCCATAAAAGGATTTGCGTTCCGATGCGGGGTGTGCAGCTTCCAGATGCACCCTTGCTGCGCGATGCTGTCCTTGGAAATGAAGATGCCATCGGTGCACCCGCACCCGCTGAGGATGGTGGGAGCAACAACATCATCAGTAGTGGAGCAGGCGAGCAGCTTGGTGGGGTGCGGGGAGTGCAAGAGGAGGAGGTCGGGGAGGGTGTACCGTTGCACGGTGTGTGATTATCAGGTGCATGCAGTGTGCGCAAAGAGCGTGAAAAACGGCCTCCGGGAGAAGGGGTACAAGGAAACCGAGAAGGCAAGCGTGCTTGGGACTGCCGCAAGACTCGCTTCTCAGGTGGTGGTTGAGTTCTTGGGAGGCATCATCGAGGGCCTCGGAGAAGGGGTTGGCGAAGCCTTAGTCCAGAACATCAATGGCAAGGCCGCCCCCACACCTCTTCATCATCGTTAATTATCTCTGCCTCCAAAACCACACACAAACATATACCTCCTTTCTACTCTTCCTCTTTCTTTCTTCCTTCCCTATGATTATTATTATTATTATCATTATTATTGTTGATTTTCTGCATCCCCTTCCTGCATATATATTATTTGAAAAATATCTACATATTATTTGGGCTAATCGTGTATTTGCCATGTGTTTTTTTTTTTTAATTAAAAAATGGATGCAGAGCAGCTAGCAGACAAGTGTTGTGTTATTTTAAGTTTGTTTCCACGTTCCATACGTATGAGTATTGGAAGTAGTGTGTGTTTTGTAATTAATGTGTAAATTATTTTAATCATTGAATCTCTTGAGCTTCAATATCAAGGTACACTTTCTTCTCCCTTTACCATTGATATGGCTGAAATTAATAAATTAAGCAGCAGCCTATGCCTAACTTCCATATCCCAAGGAATAATATTATATA CAAGGGTGCCTTCCTTGGTGGCATGCATATGTGTGTGTGTGTGTGTGGGGTAACATCTTCTCCTCTCTTCACATACTCTCCCTCCCTTTACTATAAATACTCTCCAACTCTGCTTCGAGTTTTATACCCACTAATCTATTAACTGAAGGCCACGCCATTCCAAATCGAGAGACAAAGAGACAGAGAGATAGTGATGAATAAGGGAATGATGAGCGGCAAACCCAATTTGAGGAAGACTAGAACTTTTTTCCTGCACAAGAACCAAACCTCGATGCAGCAGGCAATCATTCCGAACCAACCAGCTGAATCCGGAGAAGAGCATAATAATCATTATATTGAGAAAGAGAGCCCCCCGGGGGCGGTGAAATTCCCAGTGTCCCCTCAGCTGATGAATGGGGAACAGATGGTCCATTTCAGTCACCCTCGACACCGCCTGTCCCGGATGTGTAATCTGAACCTGTTTACGTGCGGCGGGTGCAAGGAGTACGGCGCCGGCAACGGATTCAGTTGCCAACAATGTGATTTCCAGCTCCACGACTTCTGCGCCTTCTCCCCTCCGGCCCTCAAGGCCCACCCCTTCCATTCCCACCACCAGCTTCTCTTTTACTCCAAGCCAGTGAAAGGGGGCATCATGCAGTCCAAGTGCGACATTTGCGCGAAGCCCATAAAAGGATTTGCGTTCCGATGCGGGGTGTGCAGCTTCCAGATGCACCCTTGCTGCGCGATGCTGTCCTTGGAAATGAAGATGCCATCGGTGCACCCGCACCCGCTGAGGATGGTGGGAGCAACAACATCATCAGTAGTGGAGCAGGCGAGCAGCTTGGTGGGGTGCGGGGAGTGCAAGAGGAGGAGGTCGGGGAGGGTGTACCGTTGCACGGTGTGTGATTATCAGGTGCATGCAGTGTGCGCAAAGAGCGTGAAAAACGGCCTCCGGGAGAAGGGGTACAAGGAAACCGAGAAGGCAAGCGTGCTTGGGACTGCCGCAAGACTCGCTTCTCAGGTGGTGGTTGAGTTCTTGGGAGGCATCATCGAGGGCCTCGGAGAAGGGGTTGGCGAAGCCTTAGTCCAGAACATCAATGGCAAGGCCGCCCCCACACCTCTTCATCATCGTTAATTATCTCTGCCTCCAAAACCACACACAAACATATACCTCCTTTCTACTCTTCCTCTTTCTTTCTTCCTTCCCTATGATTATTATTATTATTATCATTATTATTGTTGATTTTCTGCATCCCCTTCCTGCATATATATTATTTGAAAAATATCTACATATTATTTGGGCTAATCGTGTATTTGCCATGTGTTTTTTTTTTTTAATTAAAAAATGGATGCAGAGCAGCTAGCAGACAAGTGTTGTGTTATTTTAAGTTTGTTTCCACGTTCCATACGTATGAGTATTGGAAGTAGTGTGTGTTTTGTAATTAATGTGTAAATTATTTTAATCATTGAATCTCTTGAGCTTCAATATCAAGGTACACTTTCTTCTCCCTTTACCATTGATATGGCTGAAATTAATAAATTAAGCAGCAGCCTATGCCTAACTTCCATATCCCAAGGAATAATATTATATA ATGAATAAGGGAATGATGAGCGGCAAACCCAATTTGAGGAAGACTAGAACTTTTTTCCTGCACAAGAACCAAACCTCGATGCAGCAGGCAATCATTCCGAACCAACCAGCTGAATCCGGAGAAGAGCATAATAATCATTATATTGAGAAAGAGAGCCCCCCGGGGGCGGTGAAATTCCCAGTGTCCCCTCAGCTGATGAATGGGGAACAGATGGTCCATTTCAGTCACCCTCGACACCGCCTGTCCCGGATGTGTAATCTGAACCTGTTTACGTGCGGCGGGTGCAAGGAGTACGGCGCCGGCAACGGATTCAGTTGCCAACAATGTGATTTCCAGCTCCACGACTTCTGCGCCTTCTCCCCTCCGGCCCTCAAGGCCCACCCCTTCCATTCCCACCACCAGCTTCTCTTTTACTCCAAGCCAGTGAAAGGGGGCATCATGCAGTCCAAGTGCGACATTTGCGCGAAGCCCATAAAAGGATTTGCGTTCCGATGCGGGGTGTGCAGCTTCCAGATGCACCCTTGCTGCGCGATGCTGTCCTTGGAAATGAAGATGCCATCGGTGCACCCGCACCCGCTGAGGATGGTGGGAGCAACAACATCATCAGTAGTGGAGCAGGCGAGCAGCTTGGTGGGGTGCGGGGAGTGCAAGAGGAGGAGGTCGGGGAGGGTGTACCGTTGCACGGTGTGTGATTATCAGGTGCATGCAGTGTGCGCAAAGAGCGTGAAAAACGGCCTCCGGGAGAAGGGGTACAAGGAAACCGAGAAGGCAAGCGTGCTTGGGACTGCCGCAAGACTCGCTTCTCAGGTGGTGGTTGAGTTCTTGGGAGGCATCATCGAGGGCCTCGGAGAAGGGGTTGGCGAAGCCTTAGTCCAGAACATCAATGGCAAGGCCGCCCCCACACCTCTTCATCATCGTTAA MNKGMMSGKPNLRKTRTFFLHKNQTSMQQAIIPNQPAESGEEHNNHYIEKESPPGAVKFPVSPQLMNGEQMVHFSHPRHRLSRMCNLNLFTCGGCKEYGAGNGFSCQQCDFQLHDFCAFSPPALKAHPFHSHHQLLFYSKPVKGGIMQSKCDICAKPIKGFAFRCGVCSFQMHPCCAMLSLEMKMPSVHPHPLRMVGATTSSVVEQASSLVGCGECKRRRSGRVYRCTVCDYQVHAVCAKSVKNGLREKGYKETEKASVLGTAARLASQVVVEFLGGIIEGLGEGVGEALVQNINGKAAPTPLHHR
BLAST of Cp4.1LG00g04000.1 vs. TrEMBL
Match: A0A0A0L0U6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G665110 PE=4 SV=1) HSP 1 Score: 457.6 bits (1176), Expect = 1.2e-125 Identity = 232/313 (74.12%), Postives = 252/313 (80.51%), Query Frame = 1
BLAST of Cp4.1LG00g04000.1 vs. TrEMBL
Match: M5WGS5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017191mg PE=4 SV=1) HSP 1 Score: 356.3 bits (913), Expect = 3.7e-95 Identity = 181/291 (62.20%), Postives = 217/291 (74.57%), Query Frame = 1
BLAST of Cp4.1LG00g04000.1 vs. TrEMBL
Match: I1KKM5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_07G159100 PE=4 SV=1) HSP 1 Score: 354.8 bits (909), Expect = 1.1e-94 Identity = 170/302 (56.29%), Postives = 222/302 (73.51%), Query Frame = 1
BLAST of Cp4.1LG00g04000.1 vs. TrEMBL
Match: A0A0B2QPZ2_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_043761 PE=4 SV=1) HSP 1 Score: 342.8 bits (878), Expect = 4.3e-91 Identity = 161/270 (59.63%), Postives = 205/270 (75.93%), Query Frame = 1
BLAST of Cp4.1LG00g04000.1 vs. TrEMBL
Match: K7N0L6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_20G006200 PE=4 SV=1) HSP 1 Score: 342.0 bits (876), Expect = 7.3e-91 Identity = 168/299 (56.19%), Postives = 218/299 (72.91%), Query Frame = 1
BLAST of Cp4.1LG00g04000.1 vs. TAIR10
Match: AT1G20990.1 (AT1G20990.1 Cysteine/Histidine-rich C1 domain family protein) HSP 1 Score: 308.9 bits (790), Expect = 3.5e-84 Identity = 146/251 (58.17%), Postives = 191/251 (76.10%), Query Frame = 1
BLAST of Cp4.1LG00g04000.1 vs. TAIR10
Match: AT2G37820.1 (AT2G37820.1 Cysteine/Histidine-rich C1 domain family protein) HSP 1 Score: 103.2 bits (256), Expect = 2.9e-22 Identity = 55/186 (29.57%), Postives = 86/186 (46.24%), Query Frame = 1
BLAST of Cp4.1LG00g04000.1 vs. TAIR10
Match: AT2G37800.1 (AT2G37800.1 Cysteine/Histidine-rich C1 domain family protein) HSP 1 Score: 99.8 bits (247), Expect = 3.2e-21 Identity = 63/201 (31.34%), Postives = 89/201 (44.28%), Query Frame = 1
BLAST of Cp4.1LG00g04000.1 vs. TAIR10
Match: AT2G27660.1 (AT2G27660.1 Cysteine/Histidine-rich C1 domain family protein) HSP 1 Score: 86.3 bits (212), Expect = 3.6e-17 Identity = 57/179 (31.84%), Postives = 81/179 (45.25%), Query Frame = 1
BLAST of Cp4.1LG00g04000.1 vs. TAIR10
Match: AT2G37780.1 (AT2G37780.1 Cysteine/Histidine-rich C1 domain family protein) HSP 1 Score: 85.5 bits (210), Expect = 6.2e-17 Identity = 37/116 (31.90%), Postives = 59/116 (50.86%), Query Frame = 1
BLAST of Cp4.1LG00g04000.1 vs. NCBI nr
Match: gi|659105226|ref|XP_008453038.1| (PREDICTED: uncharacterized protein LOC103493863 [Cucumis melo]) HSP 1 Score: 459.9 bits (1182), Expect = 3.4e-126 Identity = 230/309 (74.43%), Postives = 253/309 (81.88%), Query Frame = 1
BLAST of Cp4.1LG00g04000.1 vs. NCBI nr
Match: gi|778697312|ref|XP_004145611.2| (PREDICTED: uncharacterized protein LOC101220216 [Cucumis sativus]) HSP 1 Score: 457.6 bits (1176), Expect = 1.7e-125 Identity = 232/313 (74.12%), Postives = 252/313 (80.51%), Query Frame = 1
BLAST of Cp4.1LG00g04000.1 vs. NCBI nr
Match: gi|470128299|ref|XP_004300081.1| (PREDICTED: uncharacterized protein LOC101308578 [Fragaria vesca subsp. vesca]) HSP 1 Score: 364.8 bits (935), Expect = 1.5e-97 Identity = 181/289 (62.63%), Postives = 218/289 (75.43%), Query Frame = 1
BLAST of Cp4.1LG00g04000.1 vs. NCBI nr
Match: gi|595861084|ref|XP_007211272.1| (hypothetical protein PRUPE_ppa017191mg [Prunus persica]) HSP 1 Score: 356.3 bits (913), Expect = 5.3e-95 Identity = 181/291 (62.20%), Postives = 217/291 (74.57%), Query Frame = 1
BLAST of Cp4.1LG00g04000.1 vs. NCBI nr
Match: gi|356523382|ref|XP_003530319.1| (PREDICTED: uncharacterized protein LOC100815805 [Glycine max]) HSP 1 Score: 354.8 bits (909), Expect = 1.6e-94 Identity = 170/302 (56.29%), Postives = 222/302 (73.51%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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