|
|
The following sequences are available for this feature:
Gene sequence (with intron) Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. TTCGTCAAATGCAACCCCATCAATGGAGTTTCCGAGCTTTCCCTCGATGGGTTGGGGCTAGCAGAGAGAACTGGAAGAGGGTCTGAGAAATTACAGCATCTCAAGGTACTCTCGCTTTCTAGCAACAATTTCACTGGCAATCTTAGTCCTGAGCTTGTTCTTCCCCCGGTCTTCATAGGGTTAATTCCAGTCGTAATGGTTTATCTGGACAGATACCCACTTAGATTTCTTGATTTTTCTGATAATCTCTTATGTGGGCCTCTTCCGGATTAAATGTTTGTTAATTACTTTCGCTTCATTATCTTTCTCTTGCATCGAATATGCTTCAACACATTGCCCACAAGGTGTTTGTATTTAAATATTCTGAATCTTTCGGCCAATCAATTTTTTGGTACCTTGGATTTTTTGGTGTTCGACAAGGCTTAGGACATTGGATCTTCCAAAAATGTTCTATTTAGATATTTACCACAAGGGATTTAAGCTATGCATAACCTGAAAGAGCTCAAGTTGCAGAACAATCAATTCAGCCATTCATGATCTGGGTTTGGAGGAGATTAATTTGTCTCAGAACAAGCTGATTGGTTTAGTCCCAGTAGGATCAAACAAGCTATATGAGAAACTCACCAGGATAGACCTGTCAAGGAATAGATTAGAAGGTAACTTCTCAGCAGAAATGAGATTCTACAGACACTTGAGATACATGAATCCCTCCTGGAACAACTTTAGATTCCACCAGAAATGAGTTTGTTTCCGAACTTGAATATGTTCAATTGAACAAATAATCTTTAGGTCATTCTTTGCTCCAAGTCCCTAATTCAGGTACAAATTTTTCTATTACAATTTTTCTATTACAGCATCTCTACTACCTTCTTAGTTGTTTATCATAATTAACTAATATATTTCTTGATTATGTTGGTTTGGCCTAAACAAAAGCACGAGAGAGTATTATTTGTCTTAGCTATATTCTTGGTTGTTTACCAACTTGAGCCCCATATATAAGTTTGGTTTGGTTGCTCCAAGATAGAACAGATGGGAAATGATGTAGGACTGTGGAGTTGAAATAAAATTTATATATGGATGTTATATGCATTCCAAAAAAAAAAAACTAGTTTGAACCGGATAGTTTTAGTTTTTTTTTTTTTTTTACTTAACTAGTCCTTCGAACTTGATAGTTTCTACACACCATGTTGGTTATGAGCTTGTTTAGATAATTTGAGTTGTACCCGGTGTATTGTTACCTTTTGTAGCAACAAAGAAGAACGTTCATACGGTGATAAATGCTTTAAAAGAGTTTTTTTGTTCTTTTCCTTTTGTGTATTTTTAAAACAAGAACATTAATGAAACCATGTCAAATTTTATTTTTGTATAAGCAAATTACAACATACCATTTATATAAAGTTTGAGCAACATTTCTATATAAGATGTTACATCTAAATATGGTCGCACAAATGGTTGTTAGAAAATCAAGAGGAAAACTGTTTAGGATTGTTTTTACTCTGGCATCCTTGAAGGCCATGCTCTGTTGTTTTACTTTGACCTTCTTGAGTTGATCTCAATCAAGAGAGAAGGATTGGCATCTAAAGGTGATTGTATGAGAGATGCTACAATTCAAGATGTTATTTCATTGGAAAAAATCTAACTAATACTCCATATTTATCTGTCTTACTACTCTTGATTAAGAAAATGTAGGTGTTGGTTTTTGCGGTATTCTGAAATATTGTTGCAATATTCATAATAATCAAATGGAATACTTGATTTATGTTTCATTCTTCTCATTTCACTTGCTAATTTCTATAATACTGCATCGGATAACAAAAGTGTGTTTTGTGGAGATTATGATGGATCAAAACAAAGTCCAAGAGGTACATGAAAGCAATGTTGATATCTTCATTATTGATTGTGTACAGAGGATATAGGAGGAACAAAGCGATAAAAGAGAGTGAACGTGCTGCTGGAAACAATATTTTTGATAGTAAAGTTGGGATATTATGCCTACTCAAATAACAGATACTTAAGAAGATAATGCACTAGTAAAGAATCGGTTGTTCAATGTGTTAAAAGAGTTGGAAGAACAGAGCTTGGACACTGTTGTTGTCTCTATTCTTTTGTTTCTTAAAACTTATGCACATCTAATTGAATACACCATAAATACATTATGA mRNA sequence TTCGTCAAATGCAACCCCATCAATGGAGTTTCCGAGCTTTCCCTCGATGGGTTGGGGCTAGCAGAGAGAACTGGAAGAGGGTCTGAGAAATTACAGCATCTCAAGATATTTACCACAAGGGATTTAAGCTATGCATAACCTGAAAGAGCTCAAGTTGCAGAACAATCAATTCAGCCATTCATGATCTGGGTTTGGAGGAGATTAATTTGTCTCAGAACAAGCTGATTGGTTTAGTCCCAGTAGGATCAAACAAGCTATATGAGAAACTCACCAGGATAGACCTGTCAAGGAATAGATTAGAAGGCCATGCTCTGTTGTTTTACTTTGACCTTCTTGAGTTGATCTCAATCAAGAGAGAAGGATTGGCATCTAAAGAGGATATAGGAGGAACAAAGCGATAAAAGAGAGTGAACGTGCTGCTGGAAACAATATTTTTGATAGTAAAGTTGGGATATTATGCCTACTCAAATAACAGATACTTAAGAAGATAATGCACTAGTAAAGAATCGGTTGTTCAATGTGTTAAAAGAGTTGGAAGAACAGAGCTTGGACACTGTTGTTGTCTCTATTCTTTTGTTTCTTAAAACTTATGCACATCTAATTGAATACACCATAAATACATTATGA Coding sequence (CDS) ATGCAACCCCATCAATGGAGTTTCCGAGCTTTCCCTCGATGGGTTGGGGCTAGCAGAGAGAACTGGAAGAGGGTCTGA Protein sequence MQPHQWSFRAFPRWVGASRENWKRV
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
GO Assignments
This mRNA is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0008150 |
biological_process |
| cellular_component |
GO:0005575 |
cellular_component |
| molecular_function |
GO:0003674 |
molecular_function |
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Cp4.1LG00g00250.1 | Cp4.1LG00g00250.1-protein | polypeptide |
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Cp4.1_LG00_1g00260.1:five_prime_utr:001 | Cp4.1_LG00_1g00260.1:five_prime_utr:001 | five_prime_UTR |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Cp4.1_LG00_1g00260.1:cds:001 | Cp4.1_LG00_1g00260.1:cds:001 | CDS |
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Cp4.1_LG00_1g00260.1:three_prime_utr:001 | Cp4.1_LG00_1g00260.1:three_prime_utr:001 | three_prime_UTR |
| Cp4.1_LG00_1g00260.1:three_prime_utr:002 | Cp4.1_LG00_1g00260.1:three_prime_utr:002 | three_prime_UTR |
| Cp4.1_LG00_1g00260.1:three_prime_utr:003 | Cp4.1_LG00_1g00260.1:three_prime_utr:003 | three_prime_UTR |
| Cp4.1_LG00_1g00260.1:three_prime_utr:004 | Cp4.1_LG00_1g00260.1:three_prime_utr:004 | three_prime_UTR |
|
