CmoCh20G010990.1 (mRNA) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh20G010990.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Terpene synthase
Location	Cmo_Chr20 : 10462514 .. 10463158 (+)
Sequence length	525

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACCCTACCATGAAACGAGTCTATTTTGATCAAAACTCTTCATTTATCTGTCTTACCGATAAAGTAAATAGTGTTACAAGAGTATCAAACCAAACCATTGTACGACGGTTTGGAAATTACAAGCCTTCTATTTGGAAGCATGAGTACATTGAATCATTAAGTAGTGAATTGAAGGTATGAATGATAGAAATCTTTAAATTAGTTGTTTTCTTTGTTTATTTACATTAAAGGTTATAAAGAGTCAGAAATTACTTGTTTGTTGTGCTCAGGGAGAGATATATGTAGAACGCTTCAATCAGCTAATGGAGGAGGTTGGTGAGCTTATGAACCAAATAATAAACGATCCTCTAAAGCAACTTGAGCTCATTGATACTTTACAACGACTTGGAATCTCATACCATTTTGAGAATGAGATTAAAAATGTGTTGAAAGGAACATACGAGAAGAACAATGAAAGTGATGATTCAGAAAAGAATAATTTGTATGCAACATCACTTAAATTCAGACTTTTAAGACAACATGGGTTCAATGTTTCACAAGGTATAGACATGTTTTTTTGTCGCTTAATTTTTTTTTGTTTGTTAGTTTGTTTTTTGTTTTTTTTTTGGTCCAAGAAAGGTATCAGCGTCTCTCAAAAATTAA

mRNA sequence

ATGAACCCTACCATGAAACGAGTCTATTTTGATCAAAACTCTTCATTTATCTGTCTTACCGATAAAGTAAATAGTGTTACAAGAGTATCAAACCAAACCATTGTACGACGGTTTGGAAATTACAAGCCTTCTATTTGGAAGCATGAGTACATTGAATCATTAAGTAGTGAATTGAAGGTTATAAAGAGTCAGAAATTACTTGTTTGTTGTGCTCAGGGAGAGATATATGTAGAACGCTTCAATCAGCTAATGGAGGAGGTTGGTGAGCTTATGAACCAAATAATAAACGATCCTCTAAAGCAACTTGAGCTCATTGATACTTTACAACGACTTGGAATCTCATACCATTTTGAGAATGAGATTAAAAATGTGTTGAAAGGAACATACGAGAAGAACAATGAAAGTGATGATTCAGAAAAGAATAATTTGTATGCAACATCACTTAAATTCAGACTTTTAAGACAACATGGGTTCAATGTTTCACAAGGTATAGACATAAAGGTATCAGCGTCTCTCAAAAATTAA

Coding sequence (CDS)

ATGAACCCTACCATGAAACGAGTCTATTTTGATCAAAACTCTTCATTTATCTGTCTTACCGATAAAGTAAATAGTGTTACAAGAGTATCAAACCAAACCATTGTACGACGGTTTGGAAATTACAAGCCTTCTATTTGGAAGCATGAGTACATTGAATCATTAAGTAGTGAATTGAAGGTTATAAAGAGTCAGAAATTACTTGTTTGTTGTGCTCAGGGAGAGATATATGTAGAACGCTTCAATCAGCTAATGGAGGAGGTTGGTGAGCTTATGAACCAAATAATAAACGATCCTCTAAAGCAACTTGAGCTCATTGATACTTTACAACGACTTGGAATCTCATACCATTTTGAGAATGAGATTAAAAATGTGTTGAAAGGAACATACGAGAAGAACAATGAAAGTGATGATTCAGAAAAGAATAATTTGTATGCAACATCACTTAAATTCAGACTTTTAAGACAACATGGGTTCAATGTTTCACAAGGTATAGACATAAAGGTATCAGCGTCTCTCAAAAATTAA

Homology

[Close]

BLAST of CmoCh20G010990.1 vs. Swiss-Prot
Match: MYRS_QUEIL (Myrcene synthase, chloroplastic OS=Quercus ilex PE=1 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.3e-26
Identity = 64/131 (48.85%), Postives = 87/131 (66.41%), Query Frame = 1


Query: 34  IVRRFGNYKPSIWKHEYIESLSSELKVIKSQKLLVCCAQGEIYVERFNQLMEEVGELMNQ 93
           I+RR  NY+PSIW H+YIESL  E               GE    + N L E+V  ++++
Sbjct: 55  ILRRSANYQPSIWNHDYIESLRIEYV-------------GETCTRQINVLKEQVRMMLHK 114

Query: 94  IINDPLKQLELIDTLQRLGISYHFENEIKNVLKGTYEKNNESDDSEKNNLYATSLKFRLL 153
           ++ +PL+QLELI+ LQRLG+SYHFE EIK +L G Y  ++  D  +  NLYAT+LKFRLL
Sbjct: 115 VV-NPLEQLELIEILQRLGLSYHFEEEIKRILDGVYNNDHGGDTWKAENLYATALKFRLL 171

Query: 154 RQHGFNVSQGI 165
           RQHG++VSQ +
Sbjct: 175 RQHGYSVSQEV 171

[Close]

BLAST of CmoCh20G010990.1 vs. Swiss-Prot
Match: ATESY_VITVI ((-)-alpha-terpineol synthase OS=Vitis vinifera PE=1 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 5.7e-25
Identity = 59/133 (44.36%), Postives = 87/133 (65.41%), Query Frame = 1


Query: 32  QTIVRRFGNYKPSIWKHEYIESLSSELKVIKSQKLLVCCAQGEIYVERFNQLMEEVGELM 91
           + IVRR  NY P+IW ++Y++SL S+               GE Y  R ++L  +V  ++
Sbjct: 45  EIIVRRTANYHPTIWDYDYVQSLRSDYV-------------GETYTRRLDKLKRDVKPML 104

Query: 92  NQIINDPLKQLELIDTLQRLGISYHFENEIKNVLKGTYEKNNESDDSEKNNLYATSLKFR 151
            + +  PL QLELID LQRLGI YHF++EIK +L G Y + N  ++ +K++LYAT+L+FR
Sbjct: 105 GK-VKKPLDQLELIDVLQRLGIYYHFKDEIKRILNGIYNQYNRHEEWQKDDLYATALEFR 163

Query: 152 LLRQHGFNVSQGI 165
           LLRQHG++V Q +
Sbjct: 165 LLRQHGYDVPQDV 163

[Close]

BLAST of CmoCh20G010990.1 vs. Swiss-Prot
Match: TPS10_RICCO (Terpene synthase 10 OS=Ricinus communis GN=TPS10 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 8.2e-24
Identity = 57/136 (41.91%), Postives = 88/136 (64.71%), Query Frame = 1


Query: 29  VSNQTIVRRFGNYKPSIWKHEYIESLSSELKVIKSQKLLVCCAQGEIYVERFNQLMEEVG 88
           +SN+TI+RR  NY+P IW  ++++SL SE               GE+ ++R ++L E+V 
Sbjct: 6   MSNETIIRRSANYRPPIWDFDFVQSLKSEFV-------------GELNIKRIDKLKEDVK 65

Query: 89  ELMNQIINDPLKQLELIDTLQRLGISYHFENEIKNVLKGTYEKNNESDDSEKNNLYATSL 148
            ++N+ +  P  Q ELIDTLQRLG++YHF +EIK ++K  Y  +   +   K +L+  +L
Sbjct: 66  MMLNKTMA-PSDQFELIDTLQRLGLAYHFGDEIKRIVKSIYNSHRNDNTWMKEDLHTIAL 125

Query: 149 KFRLLRQHGFNVSQGI 165
           +FRLLRQHG+N+SQ I
Sbjct: 126 QFRLLRQHGYNISQEI 127

[Close]

BLAST of CmoCh20G010990.1 vs. Swiss-Prot
Match: RLC1_CITLI ((R)-limonene synthase 1 OS=Citrus limon PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.5e-22
Identity = 61/137 (44.53%), Postives = 84/137 (61.31%), Query Frame = 1


Query: 28  RVSNQTIVRRFGNYKPSIWKHEYIESLSSELKVIKSQKLLVCCAQGEIYVERFNQLMEEV 87
           +  N T+ RR  NY+PSIW H++++SL+S                 E Y  R  +L  +V
Sbjct: 45  KYDNLTVDRRSANYQPSIWDHDFLQSLNSNYT-------------DEAYKRRAEELRGKV 104

Query: 88  GELMNQIINDPLKQLELIDTLQRLGISYHFENEIKNVLKGTYEKNNESDDSEKNNLYATS 147
              +  +I +PL QLELID LQRLG+++ FE EI+N+L   Y  NN+  +  K NLYATS
Sbjct: 105 KIAIKDVI-EPLDQLELIDNLQRLGLAHRFETEIRNILNNIY-NNNKDYNWRKENLYATS 164

Query: 148 LKFRLLRQHGFNVSQGI 165
           L+FRLLRQHG+ VSQ +
Sbjct: 165 LEFRLLRQHGYPVSQEV 166

[Close]

BLAST of CmoCh20G010990.1 vs. Swiss-Prot
Match: TPS2_CANSA ((+)-alpha-pinene synthase, chloroplastic OS=Cannabis sativa PE=1 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 2.6e-22
Identity = 69/149 (46.31%), Postives = 91/149 (61.07%), Query Frame = 1


Query: 33  TIVRRFGNYKPSIWKHEYIESLSSELKVIKSQKLLVCCAQGEIYVERFNQLMEEVGELMN 92
           TIVRR  NY P IW  ++I+SL              C  +GE Y  R N+L EEV +++ 
Sbjct: 68  TIVRRSANYDPPIWSFDFIQSLP-------------CKYKGEPYTSRSNKLKEEVKKMLV 127

Query: 93  QIINDPLKQLELIDTLQRLGISYHFENEIKNVLKGTYEKNNESDDSEKNNLYATSLKFRL 152
            + N  L QLELIDTLQRLGISYHFENEI ++LK  Y  N  ++ + K +LYAT+L+FRL
Sbjct: 128 GMENS-LVQLELIDTLQRLGISYHFENEIISILK-EYFTNISTNKNPKYDLYATALEFRL 187

Query: 153 LRQHGFNVSQGI-------DIKVSASLKN 175
           LR++G+ + Q I         K  AS+KN
Sbjct: 188 LREYGYAIPQEIFNDFKDETGKFKASIKN 201

[Close]

BLAST of CmoCh20G010990.1 vs. TrEMBL
Match: A0A0A0LM62_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G299890 PE=3 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 4.6e-42
Identity = 100/163 (61.35%), Postives = 119/163 (73.01%), Query Frame = 1


Query: 5   MKRVYFDQNSSFICLTDKVNS---VTRVSNQTIVRRFGNYKPSIWKHEYIESLSSELKVI 64
           ++RV  + N SFI    KV S    TR+ +QTIVRR GNY+P  WKHE+I+SL SE    
Sbjct: 16  IERVSCNFNPSFIPRIVKVISKTTATRMCSQTIVRRSGNYQPPFWKHEFIQSLRSEFG-- 75

Query: 65  KSQKLLVCCAQGEIYVERFNQLMEEVGELMNQIINDPLKQLELIDTLQRLGISYHFENEI 124
                      GEIYV RFN+L  E+  ++NQII+DPLKQLELIDTLQRLGISYHFENEI
Sbjct: 76  -----------GEIYVGRFNELKREIRLIINQIIDDPLKQLELIDTLQRLGISYHFENEI 135

Query: 125 KNVLKGTYEKNNESDDSEKNNLYATSLKFRLLRQHGFNVSQGI 165
           KNVLK TYEK+ E+D  + NNLYATSL+FRLLRQHGFN+SQ +
Sbjct: 136 KNVLKTTYEKSYENDYWKNNNLYATSLEFRLLRQHGFNLSQDV 165

[Close]

BLAST of CmoCh20G010990.1 vs. TrEMBL
Match: A0A0A0LM58_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G299350 PE=3 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 7.7e-37
Identity = 83/134 (61.94%), Postives = 101/134 (75.37%), Query Frame = 1


Query: 31  NQTIVRRFGNYKPSIWKHEYIESLSSELKVIKSQKLLVCCAQGEIYVERFNQLMEEVGEL 90
           ++T++RR GNY+PSIWKHE+I+SL SE                EIY+ RFNQL  E+  +
Sbjct: 3   SKTVIRRSGNYQPSIWKHEFIQSLRSEFAE-------------EIYMRRFNQLKGEIRVI 62

Query: 91  MNQIINDPLKQLELIDTLQRLGISYHFENEIKNVLKGTYEKNNESDDSEKNNLYATSLKF 150
           MN II+DPLKQLELID LQRLGISYHFENEIKNVLK  Y+K+ E +  + NNLYATSL+F
Sbjct: 63  MNTIIDDPLKQLELIDMLQRLGISYHFENEIKNVLKTIYDKSYEQEHWKNNNLYATSLEF 122

Query: 151 RLLRQHGFNVSQGI 165
           RLLRQHGFN+SQ +
Sbjct: 123 RLLRQHGFNLSQDV 123

[Close]

BLAST of CmoCh20G010990.1 vs. TrEMBL
Match: A0A0A0LMX2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G299920 PE=3 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.1e-35
Identity = 92/166 (55.42%), Postives = 118/166 (71.08%), Query Frame = 1


Query: 5   MKRVY-FDQNSSFICLTDKVNSVT----RVSNQTIVRRFGNYKPSIWKHEYIESLSSELK 64
           M+RV  F+ NS F+     +N+VT    R+ +QT+VRR GNY+PS WK+E+I+SLSSE  
Sbjct: 19  MERVSSFNHNSLFVPRV--INNVTGGGARMCSQTVVRRSGNYQPSTWKYEFIQSLSSEF- 78

Query: 65  VIKSQKLLVCCAQGEIYVERFNQLMEEVGELMNQIIND-PLKQLELIDTLQRLGISYHFE 124
                       +GEIYV  FN+L  EV  +MN+I ND PLKQLE ID LQRLGISYHFE
Sbjct: 79  ------------EGEIYVGLFNELKGEVRVIMNKIANDDPLKQLEFIDILQRLGISYHFE 138

Query: 125 NEIKNVLKGTYEKNNESDDSEKNNLYATSLKFRLLRQHGFNVSQGI 165
           NEIK++L  TY+ + E+DD + NNLYATSL+FRLLRQ+GFN+ Q +
Sbjct: 139 NEIKDMLTMTYKNHCENDDWKINNLYATSLEFRLLRQYGFNIQQDV 169

[Close]

BLAST of CmoCh20G010990.1 vs. TrEMBL
Match: A0A067KK14_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09482 PE=3 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 8.8e-25
Identity = 69/153 (45.10%), Postives = 99/153 (64.71%), Query Frame = 1


Query: 13  NSSFICLTDKVNSVTRVSNQTIVRRFGNYKPSIWKHEYIESLSSELKVIKSQKLLVCCAQ 72
           N+  +C T +      ++NQ +VRR  NY+P IW + +++SL+SE K             
Sbjct: 34  NNENLCSTVRCVVAPNIANQNLVRRSANYQPPIWDYNFVQSLTSEFK------------- 93

Query: 73  GEIYVERFNQLMEEVGELMNQIINDPLKQLELIDTLQRLGISYHFENEIKNVLKGTYEKN 132
           GE+Y +R ++L E+V  ++NQ +N  L QLELIDTLQRLG++YHFE+EI  +L   Y  N
Sbjct: 94  GEMYAKRISKLKEDVTVILNQPMNT-LDQLELIDTLQRLGLAYHFEHEITRILMVIYGHN 153

Query: 133 NESDDSE-KNNLYATSLKFRLLRQHGFNVSQGI 165
             SD+++ K  LYAT+LKFRLLRQHG+ + Q I
Sbjct: 154 --SDNTQIKECLYATALKFRLLRQHGYRIPQEI 170

[Close]

BLAST of CmoCh20G010990.1 vs. TrEMBL
Match: A1JH12_QUEIL (Pinene synthase OS=Quercus ilex GN=pins PE=2 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.1e-24
Identity = 64/131 (48.85%), Postives = 87/131 (66.41%), Query Frame = 1


Query: 34  IVRRFGNYKPSIWKHEYIESLSSELKVIKSQKLLVCCAQGEIYVERFNQLMEEVGELMNQ 93
           I+RR  NY+PSIW H+YIESL  E               GE    + N L E+V  ++++
Sbjct: 55  ILRRSANYQPSIWNHDYIESLRIEFV-------------GETCTRQINVLKEQVRMMLHK 114

Query: 94  IINDPLKQLELIDTLQRLGISYHFENEIKNVLKGTYEKNNESDDSEKNNLYATSLKFRLL 153
           ++ +PL+QLELI+ LQRLG+SYHFE EIK +L G Y  ++  D  +  NLYAT+LKFRLL
Sbjct: 115 VV-NPLEQLELIEILQRLGLSYHFEEEIKRILDGVYNNDHGGDTWKAENLYATALKFRLL 171

Query: 154 RQHGFNVSQGI 165
           RQHG++VSQ +
Sbjct: 175 RQHGYSVSQEV 171

[Close]

BLAST of CmoCh20G010990.1 vs. TAIR10
Match: AT4G16740.1 (AT4G16740.1 terpene synthase 03)

HSP 1 Score: 106.7 bits (265), Expect = 1.5e-23
Identity = 66/150 (44.00%), Postives = 90/150 (60.00%), Query Frame = 1


Query: 20  TDKVNSVTRVSNQTIVRRFGNYKPSIWKHEYIESLSSELKVIKSQKLLVCCAQGEIYVER 79
           T K +S T  S   + RR  NY+PS+W+HEY+ SL +    +K              VER
Sbjct: 11  TRKTDSKTP-SQPLVSRRSANYQPSLWQHEYLLSLGNTY--VKEDN-----------VER 70

Query: 80  FNQLMEEVGELMNQIINDPLKQLELIDTLQRLGISYHFENEIKNVLKGTYEKN-----NE 139
              L +EV +++N+     L+QLELIDTLQRLG+SYHFE EIK  L   + KN     N 
Sbjct: 71  VTLLKQEVSKMLNET-EGLLEQLELIDTLQRLGVSYHFEQEIKKTLTNVHVKNVRAHKNR 130

Query: 140 SDDSEKNNLYATSLKFRLLRQHGFNVSQGI 165
            D +   +LYAT+L+FRLLRQHGF+++Q +
Sbjct: 131 IDRNRWGDLYATALEFRLLRQHGFSIAQDV 145

[Close]

BLAST of CmoCh20G010990.1 vs. TAIR10
Match: AT2G24210.1 (AT2G24210.1 terpene synthase 10)

HSP 1 Score: 95.9 bits (237), Expect = 2.6e-20
Identity = 61/163 (37.42%), Postives = 95/163 (58.28%), Query Frame = 1


Query: 2   NPTMKRVYFDQNSSFICLTDKVNSVTRVSNQTIVRRFGNYKPSIWKHEYIESLSSELKVI 61
           N   K +   Q+S+ I +T+   +     + T+ RR  NY+PS W H ++  LS E K  
Sbjct: 15  NALRKTLRRPQSSTCIIVTE---TTPCNKSPTVQRRSANYQPSRWDHHHL--LSVENKFA 74

Query: 62  KSQKLLVCCAQGEIYVERFNQLMEEVGELMNQIINDPLKQLELIDTLQRLGISYHFENEI 121
           K ++           V   + L E+V +++N      L QLE ID LQ+LG+SYHFE EI
Sbjct: 75  KDKR-----------VRERDLLKEKVRKMLNDEQKTYLDQLEFIDDLQKLGVSYHFEAEI 134

Query: 122 KNVLKGTYEKNNESDDSEKNNLYATSLKFRLLRQHGFNVSQGI 165
            N+L  +Y+K  +  + ++++L+AT+L+FRL RQHGFNVS+ +
Sbjct: 135 DNILTSSYKK--DRTNIQESDLHATALEFRLFRQHGFNVSEDV 159

[Close]

BLAST of CmoCh20G010990.1 vs. TAIR10
Match: AT3G25810.1 (AT3G25810.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein)

HSP 1 Score: 90.9 bits (224), Expect = 8.4e-19
Identity = 53/131 (40.46%), Postives = 82/131 (62.60%), Query Frame = 1


Query: 36  RRFGNYKPSIWKHEYIESLSSELKVIKSQKLLVCCAQGEIYVERFNQLMEEVGELMNQII 95
           RR GNY+PS W H Y+  LS E K +  ++++       +  ++  +++EEV        
Sbjct: 47  RRSGNYQPSSWDHSYL--LSIENKYVNEKEVIT----RHVLKKKVKKMLEEVET------ 106

Query: 96  NDPLKQLELIDTLQRLGISYHFENEIKNVLKGTYEKNNES--DDSEKNNLYATSLKFRLL 155
              L++LELID LQ+LG+SYHFE EI N+L   + +N ++     ++ +L+AT+L+FRLL
Sbjct: 107 KSRLEKLELIDDLQKLGVSYHFEQEINNILTNFHLENGKNIWKCDKEEDLHATALEFRLL 165

Query: 156 RQHGFNVSQGI 165
           RQHGF VS+ I
Sbjct: 167 RQHGFGVSEDI 165

[Close]

BLAST of CmoCh20G010990.1 vs. TAIR10
Match: AT3G25830.1 (AT3G25830.1 terpene synthase-like sequence-1,8-cineole)

HSP 1 Score: 84.7 bits (208), Expect = 6.0e-17
Identity = 58/155 (37.42%), Postives = 86/155 (55.48%), Query Frame = 1


Query: 16  FICLTDKVNSVTRVSNQTIV----RRFGNYKPSIWKHEYIESLSSELKVIKSQKLLVCCA 75
           F+C      S+T+ +  T +    RR GNY+PS W H Y+ S+ ++              
Sbjct: 28  FVC-----KSMTKTTPDTTLVELSRRSGNYQPSPWNHCYLLSIENKYA------------ 87

Query: 76  QGEIYVERFNQLMEEVGELMNQIINDPLKQLELIDTLQRLGISYHFENEIKNVLKGTYEK 135
             E  V   + L ++V  +++      L+QLELID LQ+LG+SYHFE EI + L   + K
Sbjct: 88  -SETEVITRDVLKKKVKSMLDDEKKSRLEQLELIDDLQKLGVSYHFEIEINDTLTDLHLK 147

Query: 136 --NNESDDSEKNNLYATSLKFRLLRQHGFNVSQGI 165
              N     ++ +L+ATSL+FRLLRQHGF+VS+ I
Sbjct: 148 MGRNCWKCDKEEDLHATSLEFRLLRQHGFDVSENI 164

[Close]

BLAST of CmoCh20G010990.1 vs. TAIR10
Match: AT3G25820.1 (AT3G25820.1 terpene synthase-like sequence-1,8-cineole)

HSP 1 Score: 84.7 bits (208), Expect = 6.0e-17
Identity = 58/155 (37.42%), Postives = 86/155 (55.48%), Query Frame = 1


Query: 16  FICLTDKVNSVTRVSNQTIV----RRFGNYKPSIWKHEYIESLSSELKVIKSQKLLVCCA 75
           F+C      S+T+ +  T +    RR GNY+PS W H Y+ S+ ++              
Sbjct: 28  FVC-----KSMTKTTPDTTLVELSRRSGNYQPSPWNHCYLLSIENKYA------------ 87

Query: 76  QGEIYVERFNQLMEEVGELMNQIINDPLKQLELIDTLQRLGISYHFENEIKNVLKGTYEK 135
             E  V   + L ++V  +++      L+QLELID LQ+LG+SYHFE EI + L   + K
Sbjct: 88  -SETEVITRDVLKKKVKSMLDDEKKSRLEQLELIDDLQKLGVSYHFEIEINDTLTDLHLK 147

Query: 136 --NNESDDSEKNNLYATSLKFRLLRQHGFNVSQGI 165
              N     ++ +L+ATSL+FRLLRQHGF+VS+ I
Sbjct: 148 MGRNCWKCDKEEDLHATSLEFRLLRQHGFDVSENI 164

[Close]

BLAST of CmoCh20G010990.1 vs. NCBI nr
Match: gi|700207000|gb|KGN62119.1| (hypothetical protein Csa_2G299890 [Cucumis sativus])

HSP 1 Score: 179.1 bits (453), Expect = 6.7e-42
Identity = 100/163 (61.35%), Postives = 119/163 (73.01%), Query Frame = 1


Query: 5   MKRVYFDQNSSFICLTDKVNS---VTRVSNQTIVRRFGNYKPSIWKHEYIESLSSELKVI 64
           ++RV  + N SFI    KV S    TR+ +QTIVRR GNY+P  WKHE+I+SL SE    
Sbjct: 16  IERVSCNFNPSFIPRIVKVISKTTATRMCSQTIVRRSGNYQPPFWKHEFIQSLRSEFG-- 75

Query: 65  KSQKLLVCCAQGEIYVERFNQLMEEVGELMNQIINDPLKQLELIDTLQRLGISYHFENEI 124
                      GEIYV RFN+L  E+  ++NQII+DPLKQLELIDTLQRLGISYHFENEI
Sbjct: 76  -----------GEIYVGRFNELKREIRLIINQIIDDPLKQLELIDTLQRLGISYHFENEI 135

Query: 125 KNVLKGTYEKNNESDDSEKNNLYATSLKFRLLRQHGFNVSQGI 165
           KNVLK TYEK+ E+D  + NNLYATSL+FRLLRQHGFN+SQ +
Sbjct: 136 KNVLKTTYEKSYENDYWKNNNLYATSLEFRLLRQHGFNLSQDV 165

[Close]

BLAST of CmoCh20G010990.1 vs. NCBI nr
Match: gi|778670174|ref|XP_011649391.1| (PREDICTED: terpene synthase 10 [Cucumis sativus])

HSP 1 Score: 171.0 bits (432), Expect = 1.8e-39
Identity = 89/134 (66.42%), Postives = 104/134 (77.61%), Query Frame = 1


Query: 31  NQTIVRRFGNYKPSIWKHEYIESLSSELKVIKSQKLLVCCAQGEIYVERFNQLMEEVGEL 90
           +QTIVRR GNY+P  WKHE+I+SL SE               GEIYV RFN+L  E+  +
Sbjct: 3   SQTIVRRSGNYQPPFWKHEFIQSLRSEFG-------------GEIYVGRFNELKREIRLI 62

Query: 91  MNQIINDPLKQLELIDTLQRLGISYHFENEIKNVLKGTYEKNNESDDSEKNNLYATSLKF 150
           +NQII+DPLKQLELIDTLQRLGISYHFENEIKNVLK TYEK+ E+D  + NNLYATSL+F
Sbjct: 63  INQIIDDPLKQLELIDTLQRLGISYHFENEIKNVLKTTYEKSYENDYWKNNNLYATSLEF 122

Query: 151 RLLRQHGFNVSQGI 165
           RLLRQHGFN+SQ +
Sbjct: 123 RLLRQHGFNLSQDV 123

[Close]

BLAST of CmoCh20G010990.1 vs. NCBI nr
Match: gi|659122225|ref|XP_008461030.1| (PREDICTED: terpene synthase 10-like [Cucumis melo])

HSP 1 Score: 169.1 bits (427), Expect = 6.9e-39
Identity = 92/168 (54.76%), Postives = 117/168 (69.64%), Query Frame = 1


Query: 1   MNPTMKRVYFDQNSSFICL----TDKVNSVTRVSNQTIVRRFGNYKPSIWKHEYIESLSS 60
           ++P ++R+ F  N   +C+    T KV     + N+TIVRR GNY+P IWKHE+I+SL S
Sbjct: 12  ISPFIQRISF--NFDHLCVHVPRTFKVIGAATMCNKTIVRRSGNYRPPIWKHEFIQSLRS 71

Query: 61  ELKVIKSQKLLVCCAQGEIYVERFNQLMEEVGELMNQIINDPLKQLELIDTLQRLGISYH 120
           E              + EIY+ RFN+L  E+  +MN II+DPLKQLELID LQRLGISYH
Sbjct: 72  EF-------------EEEIYIGRFNELKGEIRVIMNTIIDDPLKQLELIDMLQRLGISYH 131

Query: 121 FENEIKNVLKGTYEKNNESDDSEKNNLYATSLKFRLLRQHGFNVSQGI 165
           FENEIKNVLK TY+ + E +  + NNLYATSL+FRLLRQHGFN+SQ +
Sbjct: 132 FENEIKNVLKTTYDTSYEKEHWKNNNLYATSLEFRLLRQHGFNLSQDV 164

[Close]

BLAST of CmoCh20G010990.1 vs. NCBI nr
Match: gi|659122221|ref|XP_008461028.1| (PREDICTED: terpene synthase 10-like [Cucumis melo])

HSP 1 Score: 167.2 bits (422), Expect = 2.6e-38
Identity = 93/161 (57.76%), Postives = 116/161 (72.05%), Query Frame = 1


Query: 6   KRVYFDQNSSFICLTDKVNSVTR--VSNQTIVRRFGNYKPSIWKHEYIESLSSELKVIKS 65
           +RV  + N SF+    K  SVT   + ++TIVRR GNY+P IWKHE+I+SL SE      
Sbjct: 17  ERVSCNFNPSFMPRIVKAISVTTRIMCSRTIVRRSGNYQPPIWKHEFIQSLRSEFAE--- 76

Query: 66  QKLLVCCAQGEIYVERFNQLMEEVGELMNQIINDPLKQLELIDTLQRLGISYHFENEIKN 125
                     EIYV RFN+L  E+  ++NQII+DPL+QLEL+DTLQRLGISYHFENEIKN
Sbjct: 77  ----------EIYVGRFNELKREIRLIVNQIIDDPLRQLELVDTLQRLGISYHFENEIKN 136

Query: 126 VLKGTYEKNNESDDSEKNNLYATSLKFRLLRQHGFNVSQGI 165
           VLK  +EK+ E+D  +K NLYATSL+FRLLRQHGFN+SQ +
Sbjct: 137 VLKTAFEKSYENDYWKKKNLYATSLEFRLLRQHGFNLSQDV 164

[Close]

BLAST of CmoCh20G010990.1 vs. NCBI nr
Match: gi|659122004|ref|XP_008460926.1| (PREDICTED: terpene synthase 10-like [Cucumis melo])

HSP 1 Score: 166.8 bits (421), Expect = 3.4e-38
Identity = 96/163 (58.90%), Postives = 117/163 (71.78%), Query Frame = 1


Query: 5   MKRVY-FDQNSSFIC-LTDKVNSVTRVSNQTIVRRFGNYKPSIWKHEYIESLSSELKVIK 64
           ++RVY F+ NS F+  + + V S  R+ +QTIVRR GNY+P  WKHE+I+SLSSE     
Sbjct: 17  VERVYSFNHNSLFVPRVMNNVTSGARMCSQTIVRRSGNYQPPTWKHEFIQSLSSEFA--- 76

Query: 65  SQKLLVCCAQGEIYVERFNQLMEEVGELMNQIIND-PLKQLELIDTLQRLGISYHFENEI 124
                     GEIYV RFN+L  EV  +MN+I ND PLKQLE ID LQRLGISYHFENEI
Sbjct: 77  ----------GEIYVGRFNELKGEVRVVMNKIANDDPLKQLEFIDILQRLGISYHFENEI 136

Query: 125 KNVLKGTYEKNNESDDSEKNNLYATSLKFRLLRQHGFNVSQGI 165
           K++L  TY+K  E+DD + NNLYATSL+FRLLRQHGFN+ Q I
Sbjct: 137 KDMLTTTYKKCCENDDWKCNNLYATSLEFRLLRQHGFNIPQDI 166

The following BLAST results are available for this feature:

BLAST of CmoCh20G010990.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MYRS_QUEIL	1.3e-26	48.85	Myrcene synthase, chloroplastic OS=Quercus ilex PE=1 SV=1	[more]
ATESY_VITVI	5.7e-25	44.36	(-)-alpha-terpineol synthase OS=Vitis vinifera PE=1 SV=1	[more]
TPS10_RICCO	8.2e-24	41.91	Terpene synthase 10 OS=Ricinus communis GN=TPS10 PE=2 SV=1	[more]
RLC1_CITLI	1.5e-22	44.53	(R)-limonene synthase 1 OS=Citrus limon PE=2 SV=1	[more]
TPS2_CANSA	2.6e-22	46.31	(+)-alpha-pinene synthase, chloroplastic OS=Cannabis sativa PE=1 SV=1	[more]

BLAST of CmoCh20G010990.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LM62_CUCSA	4.6e-42	61.35	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G299890 PE=3 SV=1	[more]
A0A0A0LM58_CUCSA	7.7e-37	61.94	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G299350 PE=3 SV=1	[more]
A0A0A0LMX2_CUCSA	1.1e-35	55.42	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G299920 PE=3 SV=1	[more]
A0A067KK14_JATCU	8.8e-25	45.10	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09482 PE=3 SV=1	[more]
A1JH12_QUEIL	1.1e-24	48.85	Pinene synthase OS=Quercus ilex GN=pins PE=2 SV=1	[more]

BLAST of CmoCh20G010990.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G16740.1	1.5e-23	44.00	terpene synthase 03	[more]
AT2G24210.1	2.6e-20	37.42	terpene synthase 10	[more]
AT3G25810.1	8.4e-19	40.46	Terpenoid cyclases/Protein prenyltransferases superfamily protein	[more]
AT3G25830.1	6.0e-17	37.42	terpene synthase-like sequence-1,8-cineole	[more]
AT3G25820.1	6.0e-17	37.42	terpene synthase-like sequence-1,8-cineole	[more]

BLAST of CmoCh20G010990.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700207000\|gb\|KGN62119.1\|	6.7e-42	61.35	hypothetical protein Csa_2G299890 [Cucumis sativus]	[more]
gi\|778670174\|ref\|XP_011649391.1\|	1.8e-39	66.42	PREDICTED: terpene synthase 10 [Cucumis sativus]	[more]
gi\|659122225\|ref\|XP_008461030.1\|	6.9e-39	54.76	PREDICTED: terpene synthase 10-like [Cucumis melo]	[more]
gi\|659122221\|ref\|XP_008461028.1\|	2.6e-38	57.76	PREDICTED: terpene synthase 10-like [Cucumis melo]	[more]
gi\|659122004\|ref\|XP_008460926.1\|	3.4e-38	58.90	PREDICTED: terpene synthase 10-like [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001906	Terpene_synth_N
IPR008930	Terpenoid_cyclase/PrenylTrfase

Vocabulary: **Biological Process**
Term	Definition
GO:0008152	metabolic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0010333	terpene synthase activity
GO:0016829	lyase activity

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016829	lyase activity
molecular_function	GO:0010333	terpene synthase activity
molecular_function	GO:0046872	metal ion binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh20G010990	CmoCh20G010990	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh20G010990.1	CmoCh20G010990.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh20G010990.1.exon.1	CmoCh20G010990.1.exon.1	exon
CmoCh20G010990.1.exon.2	CmoCh20G010990.1.exon.2	exon
CmoCh20G010990.1.exon.3	CmoCh20G010990.1.exon.3	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh20G010990.1.CDS.1	CmoCh20G010990.1.CDS.1	CDS
CmoCh20G010990.1.CDS.2	CmoCh20G010990.1.CDS.2	CDS
CmoCh20G010990.1.CDS.3	CmoCh20G010990.1.CDS.3	CDS

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001906	Terpene synthase, N-terminal domain	GENE3D	G3DSA:1.50.30.10		coord: 76..163 score: 4.5
IPR001906	Terpene synthase, N-terminal domain	PFAM	PF01397	Terpene_synth	coord: 71..163 score: 2.7
IPR008930	Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid	unknown	SSF48239	Terpenoid cyclases/Protein prenyltransferases	coord: 42..163 score: 1.96
None	No IPR available	PANTHER	PTHR31225	FAMILY NOT NAMED	coord: 30..164 score: 1.6
None	No IPR available	PANTHER	PTHR31225:SF16	1,8-CINEOLE SYNTHASE 1, CHLOROPLASTIC-RELATED	coord: 30..164 score: 1.6