CmoCh20G010070.1 (mRNA) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTCAATCCAGTGTCGTTTTGAGTTGGTGTTCTGTTTTTAGGCAAAAATCTGAAGATCTACTTGTTCCATGATCCATTTGTAAGGCCCCCAACATTCTCGGAACCAGAAAAACAGCAAGAAATTTCTGAGCATTCAAAATTCTCCTCTCTCTCTCTCTCTCGTAGATCTCCCATGGCGGACGAATCTTACTGTAAACACAATTTGAAGATGGCAATGTTAAACCATGAACACACATTTCGTCACCAAGTACCTTTTCTTCTTCTTCTTCCTCTTTCTCCACTTCCCTTTGTCTCGTCTTTCCTTTTGTTTAACAGCGGCCAGAGGCTTTTTTTGTTGCAGGTTTATGAGCTCCACCGATTGTACAGAATTCAGAAGGTTTTGATGAAGAACATAGCTGAAAACAGGGGAAAAACAGAGGAGGAAGAAGAAGAAGAAGGTGAAGAGATTGAGTTTATTCAGGAAAGTGAGATTGAATTGACATTGGGGCCTTCCAGTTATAGTAATCAAGTTGGAGGGAGGAGAAGGAGGAGAAAGAAATTGGGTGAATTAATGAAAGGAGGTTCCGATTCTTCCTCCTCCTCGACCACTGGATCTGCGCCTAAAGGTGGAATTCTTTATCGAGATGGCGAGTTTCTGGGATTTCTCGAGCTTCAAGATGAAACCCGGCTTGCTCAACACCATCCAAATCCATGGCTTTGTCAAGTTGTAAGCCTTAATCTCACTTGATTTTCATTTTTTATGTTTATTGATTGATTTTGTTTTTCTAGTTTTTATAATTCCCTTGTCATTGGCTGATTGAGAGCCTTATCTGTGTACAAGTTTATAACCGAGTTAATATCATTATCACCCGCCC ATTCAATCCAGTGTCGTTTTGAGTTGGTGTTCTGTTTTTAGGCAAAAATCTGAAGATCTACTTGTTCCATGATCCATTTGTAAGGCCCCCAACATTCTCGGAACCAGAAAAACAGCAAGAAATTTCTGAGCATTCAAAATTCTCCTCTCTCTCTCTCTCTCGTAGATCTCCCATGGCGGACGAATCTTACTGTAAACACAATTTGAAGATGGCAATGTTAAACCATGAACACACATTTCGTCACCAAGTTTATGAGCTCCACCGATTGTACAGAATTCAGAAGGTTTTGATGAAGAACATAGCTGAAAACAGGGGAAAAACAGAGGAGGAAGAAGAAGAAGAAGGTGAAGAGATTGAGTTTATTCAGGAAAGTGAGATTGAATTGACATTGGGGCCTTCCAGTTATAGTAATCAAGTTGGAGGGAGGAGAAGGAGGAGAAAGAAATTGGGTGAATTAATGAAAGGAGGTTCCGATTCTTCCTCCTCCTCGACCACTGGATCTGCGCCTAAAGGTGGAATTCTTTATCGAGATGGCGAGTTTCTGGGATTTCTCGAGCTTCAAGATGAAACCCGGCTTGCTCAACACCATCCAAATCCATGGCTTTGTCAAGTTGTAAGCCTTAATCTCACTTGATTTTCATTTTTTATGTTTATTGATTGATTTTGTTTTTCTAGTTTTTATAATTCCCTTGTCATTGGCTGATTGAGAGCCTTATCTGTGTACAAGTTTATAACCGAGTTAATATCATTATCACCCGCCC ATGGCGGACGAATCTTACTGTAAACACAATTTGAAGATGGCAATGTTAAACCATGAACACACATTTCGTCACCAAGTTTATGAGCTCCACCGATTGTACAGAATTCAGAAGGTTTTGATGAAGAACATAGCTGAAAACAGGGGAAAAACAGAGGAGGAAGAAGAAGAAGAAGGTGAAGAGATTGAGTTTATTCAGGAAAGTGAGATTGAATTGACATTGGGGCCTTCCAGTTATAGTAATCAAGTTGGAGGGAGGAGAAGGAGGAGAAAGAAATTGGGTGAATTAATGAAAGGAGGTTCCGATTCTTCCTCCTCCTCGACCACTGGATCTGCGCCTAAAGGTGGAATTCTTTATCGAGATGGCGAGTTTCTGGGATTTCTCGAGCTTCAAGATGAAACCCGGCTTGCTCAACACCATCCAAATCCATGGCTTTGTCAAGTTGTAAGCCTTAATCTCACTTGA
BLAST of CmoCh20G010070.1 vs. TrEMBL
Match: A0A0A0LJL7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G277640 PE=4 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 1.8e-45 Identity = 114/174 (65.52%), Postives = 129/174 (74.14%), Query Frame = 1
BLAST of CmoCh20G010070.1 vs. TrEMBL
Match: W9QC87_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_005918 PE=4 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 1.4e-18 Identity = 71/177 (40.11%), Postives = 93/177 (52.54%), Query Frame = 1
BLAST of CmoCh20G010070.1 vs. TrEMBL
Match: A0A067KAK8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12514 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 8.6e-16 Identity = 76/214 (35.51%), Postives = 98/214 (45.79%), Query Frame = 1
BLAST of CmoCh20G010070.1 vs. TrEMBL
Match: A0A151TWT2_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_010737 PE=4 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 1.5e-15 Identity = 68/173 (39.31%), Postives = 92/173 (53.18%), Query Frame = 1
BLAST of CmoCh20G010070.1 vs. TrEMBL
Match: M4ESQ1_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 1.2e-14 Identity = 65/170 (38.24%), Postives = 83/170 (48.82%), Query Frame = 1
BLAST of CmoCh20G010070.1 vs. TAIR10
Match: AT5G67390.1 (AT5G67390.1 unknown protein) HSP 1 Score: 84.3 bits (207), Expect = 6.9e-17 Identity = 65/176 (36.93%), Postives = 87/176 (49.43%), Query Frame = 1
BLAST of CmoCh20G010070.1 vs. TAIR10
Match: AT1G69360.1 (AT1G69360.1 Plant protein of unknown function (DUF863)) HSP 1 Score: 47.8 bits (112), Expect = 7.2e-06 Identity = 27/46 (58.70%), Postives = 32/46 (69.57%), Query Frame = 1
BLAST of CmoCh20G010070.1 vs. NCBI nr
Match: gi|659115849|ref|XP_008457768.1| (PREDICTED: uncharacterized protein LOC103497380 [Cucumis melo]) HSP 1 Score: 192.6 bits (488), Expect = 5.1e-46 Identity = 115/174 (66.09%), Postives = 130/174 (74.71%), Query Frame = 1
BLAST of CmoCh20G010070.1 vs. NCBI nr
Match: gi|778669893|ref|XP_011649318.1| (PREDICTED: uncharacterized protein LOC105434616 [Cucumis sativus]) HSP 1 Score: 190.3 bits (482), Expect = 2.5e-45 Identity = 114/174 (65.52%), Postives = 129/174 (74.14%), Query Frame = 1
BLAST of CmoCh20G010070.1 vs. NCBI nr
Match: gi|703063423|ref|XP_010086958.1| (hypothetical protein L484_005918 [Morus notabilis]) HSP 1 Score: 100.9 bits (250), Expect = 2.0e-18 Identity = 71/177 (40.11%), Postives = 93/177 (52.54%), Query Frame = 1
BLAST of CmoCh20G010070.1 vs. NCBI nr
Match: gi|802645813|ref|XP_012079374.1| (PREDICTED: uncharacterized protein LOC105639824 [Jatropha curcas]) HSP 1 Score: 91.7 bits (226), Expect = 1.2e-15 Identity = 76/214 (35.51%), Postives = 98/214 (45.79%), Query Frame = 1
BLAST of CmoCh20G010070.1 vs. NCBI nr
Match: gi|1012360294|gb|KYP71478.1| (hypothetical protein KK1_010737 [Cajanus cajan]) HSP 1 Score: 90.9 bits (224), Expect = 2.1e-15 Identity = 68/173 (39.31%), Postives = 92/173 (53.18%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
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