CmoCh20G001090.1 (mRNA) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh20G001090.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Pentatricopeptide repeat-containing protein
Location	Cmo_Chr20 : 562639 .. 564720 (-)
Sequence length	2082

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTATATGACACTATTATCTGCCTTGAGAACTTGCGCTAGCTCCAAATTGCTGAAACAAGGCAAGCTCATCCACCAGAGGATATTTTGTTCAGGCTTTCAATCCAACGTCACCCTCTGCAAAGCCCTCATCGGCTTTTACTTCTCTTGCTATGATTACAGATCAGCGGAGCTTGTTTTTCAGACCAACGATTGCCCATTGGATGTTTCTTTGTGGAATGCTCTTCTTTCTGCTTACACCAAGAGTTCCAGGTTCGTTGAAGCTCTGCAACTTTTTGATCAATTGAAAAGTCATTCTCATGTAAGACCTGATTGTTACACTTACCCTGTTGTTCTTAAGGCGTGTGGTGGATTGGGTAGAGTTGTTTATGGGAGAAGGATCCATAATCATTTGATAAAAACGGGGTTGATTTGGGATGTTTTTGTGGGGAGTTCTATGATGAATATGTATGCGAAATGCGATCAGTTTCATGATGCCGTTGACCTGTTCGACGAAATTCCTCAGAGAGATGTGGGGTGTTGGAACGCTGTTATCTCTTGTTATTTTCAAGATGATAAGCCTGAGGCTGCCCTGAAGATGTTTGATAAAATGAAAGAGTTGGGTTTTGAGCCTAATTCAGTGACTTTTACCGTCGTTGTCTCATCATGTGCAAGGCTTTTGAATTTGGAGAGAGGTAAGGAGATTCATAGGGAGTTGATCGATAGGAGCGTTTTGTTGGATGCTTTTGTTCTTTCTGCGCTCGTAGACATGTATGGAAAATGTGGTTGTTTAGAAATGGCCAAAGAAGTTTTTGAGCAAATCCCAAGGAAGAATGCGATGACTTGGAATTCTATGATCACAGGGTATAGCTTAAAAGGTGATAGCAGATCCTGCATTGAACTTCTCATGAGGATGAACTACGAGGGAACCGAACCGACTTTGACGACTTTGACCAGCATAATATATGCTAGCTCAAGGTCTGTTCAACTTCGGCACGGAAAATTTATACATGGATATATTTTGAGAAATAGAATAGATGTTGATATCTTCATTGACGTTTCTCTCATTGATTTATATTTTAAATGTGGATCGGTTTCTTCGGCCGAAACTGTCTTCAGAAATGTATCCAAGAATGATGTAGTTTCTTGGAATGTTATGATTTCTGGATATGTGATGGTGGGTAATCACATTCAGGCTCTTCGTGTCTATGATAACATGAAAGAACATCATGTAAAACCAGATGCAGTAACATTTTCTAGCACCTTATCAGCTTGTTCACAGCTAGCAGCCTTGGATAAGGGTAGGGAGCTTCACCACTGCATCATCAGTCACAAGTTGGAAAGCAATGAAATCGTTATGGGGGCTCTTCTTGATATGTATGCTAAATGTGGTGATGTCAACGAAGCACGGAAACTATTTCATCAATTACCAGAGCGAGATCTTGTGTCGTGGACATCGATGATCACTGCTTATGGATCTCATGGCCAGGCTTCTGAAGCTTTGAGGCTTTTTGATGAAATGAAGAAGTCGAATGTACGAGCCGATTCAGTTACGTTCCTGGCAGTTCTATCTGCTTGTAGTCATGCTGGATTGGTTGATGAAGGTTATATATATTTCAACGAAATGATCACTCAGTATGACATTAGGCCCGGCATTGAACACTATTCATGCTTGATAGATCTACTTGGACGTGCTGGAAGACTACATGAAGCTTATGAGATTCTCGAAAGATCAGAAGAGACTAGGAACGATACCGGATTGTTAAGCACACTGTTTTCTGCGTGTCGATTGCATAATGATTTTGGTTTAGGCATACAAATAGGGAAATTGCTTATGGAGGTACATCCTGATGACCCATCTACTTACATTTTGCTGTCGAATATGTATGCTTCTGTCAATAAATGGGAGGAGGTACGTAACGTACGACGAAAAATGAAAGAACTTGGATTGAAGAAGAGGCCTGGTTGCAGCTGGATTGAGATAAACCAGAGGATTCAGCCATTCTTTGTTGAAGATAAGTCAAACCCTGTAGTTGATGGGGTCTATGAATGTCTAAGCACTCTAGGCTGTCATATGGAGAAGAATGAACTTGAGGTGTAG

mRNA sequence

ATGGATTATATGACACTATTATCTGCCTTGAGAACTTGCGCTAGCTCCAAATTGCTGAAACAAGGCAAGCTCATCCACCAGAGGATATTTTGTTCAGGCTTTCAATCCAACGTCACCCTCTGCAAAGCCCTCATCGGCTTTTACTTCTCTTGCTATGATTACAGATCAGCGGAGCTTGTTTTTCAGACCAACGATTGCCCATTGGATGTTTCTTTGTGGAATGCTCTTCTTTCTGCTTACACCAAGAGTTCCAGGTTCGTTGAAGCTCTGCAACTTTTTGATCAATTGAAAAGTCATTCTCATGTAAGACCTGATTGTTACACTTACCCTGTTGTTCTTAAGGCGTGTGGTGGATTGGGTAGAGTTGTTTATGGGAGAAGGATCCATAATCATTTGATAAAAACGGGGTTGATTTGGGATGTTTTTGTGGGGAGTTCTATGATGAATATGTATGCGAAATGCGATCAGTTTCATGATGCCGTTGACCTGTTCGACGAAATTCCTCAGAGAGATGTGGGGTGTTGGAACGCTGTTATCTCTTGTTATTTTCAAGATGATAAGCCTGAGGCTGCCCTGAAGATGTTTGATAAAATGAAAGAGTTGGGTTTTGAGCCTAATTCAGTGACTTTTACCGTCGTTGTCTCATCATGTGCAAGGCTTTTGAATTTGGAGAGAGGTAAGGAGATTCATAGGGAGTTGATCGATAGGAGCGTTTTGTTGGATGCTTTTGTTCTTTCTGCGCTCGTAGACATGTATGGAAAATGTGGTTGTTTAGAAATGGCCAAAGAAGTTTTTGAGCAAATCCCAAGGAAGAATGCGATGACTTGGAATTCTATGATCACAGGGTATAGCTTAAAAGGTGATAGCAGATCCTGCATTGAACTTCTCATGAGGATGAACTACGAGGGAACCGAACCGACTTTGACGACTTTGACCAGCATAATATATGCTAGCTCAAGGTCTGTTCAACTTCGGCACGGAAAATTTATACATGGATATATTTTGAGAAATAGAATAGATGTTGATATCTTCATTGACGTTTCTCTCATTGATTTATATTTTAAATGTGGATCGGTTTCTTCGGCCGAAACTGTCTTCAGAAATGTATCCAAGAATGATGTAGTTTCTTGGAATGTTATGATTTCTGGATATGTGATGGTGGGTAATCACATTCAGGCTCTTCGTGTCTATGATAACATGAAAGAACATCATGTAAAACCAGATGCAGTAACATTTTCTAGCACCTTATCAGCTTGTTCACAGCTAGCAGCCTTGGATAAGGGTAGGGAGCTTCACCACTGCATCATCAGTCACAAGTTGGAAAGCAATGAAATCGTTATGGGGGCTCTTCTTGATATGTATGCTAAATGTGGTGATGTCAACGAAGCACGGAAACTATTTCATCAATTACCAGAGCGAGATCTTGTGTCGTGGACATCGATGATCACTGCTTATGGATCTCATGGCCAGGCTTCTGAAGCTTTGAGGCTTTTTGATGAAATGAAGAAGTCGAATGTACGAGCCGATTCAGTTACGTTCCTGGCAGTTCTATCTGCTTGTAGTCATGCTGGATTGGTTGATGAAGGTTATATATATTTCAACGAAATGATCACTCAGTATGACATTAGGCCCGGCATTGAACACTATTCATGCTTGATAGATCTACTTGGACGTGCTGGAAGACTACATGAAGCTTATGAGATTCTCGAAAGATCAGAAGAGACTAGGAACGATACCGGATTGTTAAGCACACTGTTTTCTGCGTGTCGATTGCATAATGATTTTGGTTTAGGCATACAAATAGGGAAATTGCTTATGGAGGTACATCCTGATGACCCATCTACTTACATTTTGCTGTCGAATATGTATGCTTCTGTCAATAAATGGGAGGAGGTACGTAACGTACGACGAAAAATGAAAGAACTTGGATTGAAGAAGAGGCCTGGTTGCAGCTGGATTGAGATAAACCAGAGGATTCAGCCATTCTTTGTTGAAGATAAGTCAAACCCTGTAGTTGATGGGGTCTATGAATGTCTAAGCACTCTAGGCTGTCATATGGAGAAGAATGAACTTGAGGTGTAG

Coding sequence (CDS)

ATGGATTATATGACACTATTATCTGCCTTGAGAACTTGCGCTAGCTCCAAATTGCTGAAACAAGGCAAGCTCATCCACCAGAGGATATTTTGTTCAGGCTTTCAATCCAACGTCACCCTCTGCAAAGCCCTCATCGGCTTTTACTTCTCTTGCTATGATTACAGATCAGCGGAGCTTGTTTTTCAGACCAACGATTGCCCATTGGATGTTTCTTTGTGGAATGCTCTTCTTTCTGCTTACACCAAGAGTTCCAGGTTCGTTGAAGCTCTGCAACTTTTTGATCAATTGAAAAGTCATTCTCATGTAAGACCTGATTGTTACACTTACCCTGTTGTTCTTAAGGCGTGTGGTGGATTGGGTAGAGTTGTTTATGGGAGAAGGATCCATAATCATTTGATAAAAACGGGGTTGATTTGGGATGTTTTTGTGGGGAGTTCTATGATGAATATGTATGCGAAATGCGATCAGTTTCATGATGCCGTTGACCTGTTCGACGAAATTCCTCAGAGAGATGTGGGGTGTTGGAACGCTGTTATCTCTTGTTATTTTCAAGATGATAAGCCTGAGGCTGCCCTGAAGATGTTTGATAAAATGAAAGAGTTGGGTTTTGAGCCTAATTCAGTGACTTTTACCGTCGTTGTCTCATCATGTGCAAGGCTTTTGAATTTGGAGAGAGGTAAGGAGATTCATAGGGAGTTGATCGATAGGAGCGTTTTGTTGGATGCTTTTGTTCTTTCTGCGCTCGTAGACATGTATGGAAAATGTGGTTGTTTAGAAATGGCCAAAGAAGTTTTTGAGCAAATCCCAAGGAAGAATGCGATGACTTGGAATTCTATGATCACAGGGTATAGCTTAAAAGGTGATAGCAGATCCTGCATTGAACTTCTCATGAGGATGAACTACGAGGGAACCGAACCGACTTTGACGACTTTGACCAGCATAATATATGCTAGCTCAAGGTCTGTTCAACTTCGGCACGGAAAATTTATACATGGATATATTTTGAGAAATAGAATAGATGTTGATATCTTCATTGACGTTTCTCTCATTGATTTATATTTTAAATGTGGATCGGTTTCTTCGGCCGAAACTGTCTTCAGAAATGTATCCAAGAATGATGTAGTTTCTTGGAATGTTATGATTTCTGGATATGTGATGGTGGGTAATCACATTCAGGCTCTTCGTGTCTATGATAACATGAAAGAACATCATGTAAAACCAGATGCAGTAACATTTTCTAGCACCTTATCAGCTTGTTCACAGCTAGCAGCCTTGGATAAGGGTAGGGAGCTTCACCACTGCATCATCAGTCACAAGTTGGAAAGCAATGAAATCGTTATGGGGGCTCTTCTTGATATGTATGCTAAATGTGGTGATGTCAACGAAGCACGGAAACTATTTCATCAATTACCAGAGCGAGATCTTGTGTCGTGGACATCGATGATCACTGCTTATGGATCTCATGGCCAGGCTTCTGAAGCTTTGAGGCTTTTTGATGAAATGAAGAAGTCGAATGTACGAGCCGATTCAGTTACGTTCCTGGCAGTTCTATCTGCTTGTAGTCATGCTGGATTGGTTGATGAAGGTTATATATATTTCAACGAAATGATCACTCAGTATGACATTAGGCCCGGCATTGAACACTATTCATGCTTGATAGATCTACTTGGACGTGCTGGAAGACTACATGAAGCTTATGAGATTCTCGAAAGATCAGAAGAGACTAGGAACGATACCGGATTGTTAAGCACACTGTTTTCTGCGTGTCGATTGCATAATGATTTTGGTTTAGGCATACAAATAGGGAAATTGCTTATGGAGGTACATCCTGATGACCCATCTACTTACATTTTGCTGTCGAATATGTATGCTTCTGTCAATAAATGGGAGGAGGTACGTAACGTACGACGAAAAATGAAAGAACTTGGATTGAAGAAGAGGCCTGGTTGCAGCTGGATTGAGATAAACCAGAGGATTCAGCCATTCTTTGTTGAAGATAAGTCAAACCCTGTAGTTGATGGGGTCTATGAATGTCTAAGCACTCTAGGCTGTCATATGGAGAAGAATGAACTTGAGGTGTAG

Homology

[Close]

BLAST of CmoCh20G001090.1 vs. Swiss-Prot
Match: PP398_ARATH (Pentatricopeptide repeat-containing protein At5g27110 OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2)

HSP 1 Score: 786.2 bits (2029), Expect = 3.0e-226
Identity = 376/691 (54.41%), Postives = 512/691 (74.10%), Query Frame = 1


Query: 1   MDYMTLLSALRTCASS-KLLKQGKLIHQRIFCSGFQSNVTLCKALIGFYFSCYDYRSAEL 60
           M+   LLS LR C +S K L++ KL+HQRI   G + +V LCK+LI  YF+C D+ SA  
Sbjct: 1   MESSKLLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARH 60

Query: 61  VFQTNDCPLDVSLWNALLSAYTKSSRFVEALQLFDQLKSHSHVRPDCYTYPVVLKACGGL 120
           VF+  D   DV +WN+L+S Y+K+S F + L++F +L + S   PD +T+P V+KA G L
Sbjct: 61  VFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGAL 120

Query: 121 GRVVYGRRIHNHLIKTGLIWDVFVGSSMMNMYAKCDQFHDAVDLFDEIPQRDVGCWNAVI 180
           GR   GR IH  ++K+G + DV V SS++ MYAK + F +++ +FDE+P+RDV  WN VI
Sbjct: 121 GREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVI 180

Query: 181 SCYFQDDKPEAALKMFDKMKELGFEPNSVTFTVVVSSCARLLNLERGKEIHRELIDRSVL 240
           SC++Q  + E AL++F +M+  GFEPNSV+ TV +S+C+RLL LERGKEIHR+ + +   
Sbjct: 181 SCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFE 240

Query: 241 LDAFVLSALVDMYGKCGCLEMAKEVFEQIPRKNAMTWNSMITGYSLKGDSRSCIELLMRM 300
           LD +V SALVDMYGKC CLE+A+EVF+++PRK+ + WNSMI GY  KGDS+SC+E+L RM
Sbjct: 241 LDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRM 300

Query: 301 NYEGTEPTLTTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDLYFKCGSV 360
             EGT P+ TTLTSI+ A SRS  L HGKFIHGY++R+ ++ DI+++ SLIDLYFKCG  
Sbjct: 301 IIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEA 360

Query: 361 SSAETVFRNVSKNDVVSWNVMISGYVMVGNHIQALRVYDNMKEHHVKPDAVTFSSTLSAC 420
           + AETVF    K+   SWNVMIS Y+ VGN  +A+ VYD M    VKPD VTF+S L AC
Sbjct: 361 NLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPAC 420

Query: 421 SQLAALDKGRELHHCIISHKLESNEIVMGALLDMYAKCGDVNEARKLFHQLPERDLVSWT 480
           SQLAAL+KG+++H  I   +LE++E+++ ALLDMY+KCG+  EA ++F+ +P++D+VSWT
Sbjct: 421 SQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWT 480

Query: 481 SMITAYGSHGQASEALRLFDEMKKSNVRADSVTFLAVLSACSHAGLVDEGYIYFNEMITQ 540
            MI+AYGSHGQ  EAL  FDEM+K  ++ D VT LAVLSAC HAGL+DEG  +F++M ++
Sbjct: 481 VMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSK 540

Query: 541 YDIRPGIEHYSCLIDLLGRAGRLHEAYEILERSEETRNDTGLLSTLFSACRLHNDFGLGI 600
           Y I P IEHYSC+ID+LGRAGRL EAYEI++++ ET ++  LLSTLFSAC LH +  LG 
Sbjct: 541 YGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGD 600

Query: 601 QIGKLLMEVHPDDPSTYILLSNMYASVNKWEEVRNVRRKMKELGLKKRPGCSWIEINQRI 660
           +I +LL+E +PDD STY++L N+YAS   W+  R VR KMKE+GL+K+PGCSWIE++ ++
Sbjct: 601 RIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKV 660

Query: 661 QPFFVEDKSNPVVDGVYECLSTLGCHMEKNE 691
             FF ED+S+   + VYECL+ L  HME  +
Sbjct: 661 CHFFAEDRSHLRAENVYECLALLSGHMESGQ 691

[Close]

BLAST of CmoCh20G001090.1 vs. Swiss-Prot
Match: PP320_ARATH (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana GN=DOT4 PE=2 SV=1)

HSP 1 Score: 461.5 bits (1186), Expect = 1.7e-128
Identity = 245/688 (35.61%), Postives = 391/688 (56.83%), Query Frame = 1


Query: 1   MDYMTLLSALRTCASSKLLKQGKLIHQRIFCSGFQSNVTLCKALIGFYFSCYDYRSAELV 60
           +D  TL S L+ CA SK LK GK +   I  +GF  +  L   L   Y +C D + A  V
Sbjct: 92  IDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRV 151

Query: 61  FQTNDCPLDVSL-WNALLSAYTKSSRFVEALQLFDQLKSHSHVRPDCYTYPVVLKACGGL 120
           F  ++  ++ +L WN L++   KS  F  ++ LF ++ S S V  D YT+  V K+   L
Sbjct: 152 F--DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMS-SGVEMDSYTFSCVSKSFSSL 211

Query: 121 GRVVYGRRIHNHLIKTGLIWDVFVGSSMMNMYAKCDQFHDAVDLFDEIPQRDVGCWNAVI 180
             V  G ++H  ++K+G      VG+S++  Y K  +   A  +FDE+ +RDV  WN++I
Sbjct: 212 RSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSII 271

Query: 181 SCYFQDDKPEAALKMFDKMKELGFEPNSVTFTVVVSSCARLLNLERGKEIHRELIDRSVL 240
           + Y  +   E  L +F +M   G E +  T   V + CA    +  G+ +H   +     
Sbjct: 272 NGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFS 331

Query: 241 LDAFVLSALVDMYGKCGCLEMAKEVFEQIPRKNAMTWNSMITGYSLKGDSRSCIELLMRM 300
            +    + L+DMY KCG L+ AK VF ++  ++ +++ SMI GY+ +G +   ++L   M
Sbjct: 332 REDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEM 391

Query: 301 NYEGTEPTLTTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDLYFKCGSV 360
             EG  P + T+T+++   +R   L  GK +H +I  N +  DIF+  +L+D+Y KCGS+
Sbjct: 392 EEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSM 451

Query: 361 SSAETVFRNVSKNDVVSWNVMISGYVMVGNHIQALRVYD-NMKEHHVKPDAVTFSSTLSA 420
             AE VF  +   D++SWN +I GY       +AL +++  ++E    PD  T +  L A
Sbjct: 452 QEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPA 511

Query: 421 CSQLAALDKGRELHHCIISHKLESNEIVMGALLDMYAKCGDVNEARKLFHQLPERDLVSW 480
           C+ L+A DKGRE+H  I+ +   S+  V  +L+DMYAKCG +  A  LF  +  +DLVSW
Sbjct: 512 CASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSW 571

Query: 481 TSMITAYGSHGQASEALRLFDEMKKSNVRADSVTFLAVLSACSHAGLVDEGYIYFNEMIT 540
           T MI  YG HG   EA+ LF++M+++ + AD ++F+++L ACSH+GLVDEG+ +FN M  
Sbjct: 572 TVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRH 631

Query: 541 QYDIRPGIEHYSCLIDLLGRAGRLHEAYEILERSEETRNDTGLLSTLFSACRLHNDFGLG 600
           +  I P +EHY+C++D+L R G L +AY  +E +     D  +   L   CR+H+D  L 
Sbjct: 632 ECKIEPTVEHYACIVDMLARTGDLIKAYRFIE-NMPIPPDATIWGALLCGCRIHHDVKLA 691

Query: 601 IQIGKLLMEVHPDDPSTYILLSNMYASVNKWEEVRNVRRKMKELGLKKRPGCSWIEINQR 660
            ++ + + E+ P++   Y+L++N+YA   KWE+V+ +R+++ + GL+K PGCSWIEI  R
Sbjct: 692 EKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGR 751

Query: 661 IQPFFVEDKSNPVVDGVYECLSTLGCHM 687
           +  F   D SNP  + +   L  +   M
Sbjct: 752 VNIFVAGDSSNPETENIEAFLRKVRARM 775

[Close]

BLAST of CmoCh20G001090.1 vs. Swiss-Prot
Match: PP210_ARATH (Pentatricopeptide repeat-containing protein At3g03580 OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1)

HSP 1 Score: 440.3 bits (1131), Expect = 4.0e-122
Identity = 233/688 (33.87%), Postives = 395/688 (57.41%), Query Frame = 1


Query: 2   DYMTLLSALRTCASSKLLKQGKLIHQRIFCSGFQSNVTLCKALIGFYFSCYDYRSAELVF 61
           D  T  S ++ CA     + G L++++I   GF+S++ +  AL+  Y        A  VF
Sbjct: 105 DKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVF 164

Query: 62  QTNDCPL-DVSLWNALLSAYTKSSRFVEALQLFDQLKSHSHVRPDCYTYPVVLKACGGLG 121
             ++ P+ D+  WN+L+S Y+    + EAL+++ +LK+ S + PD +T   VL A G L 
Sbjct: 165 --DEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKN-SWIVPDSFTVSSVLPAFGNLL 224

Query: 122 RVVYGRRIHNHLIKTGLIWDVFVGSSMMNMYAKCDQFHDAVDLFDEIPQRDVGCWNAVIS 181
            V  G+ +H   +K+G+   V V + ++ MY K  +  DA  +FDE+  RD   +N +I 
Sbjct: 225 VVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMIC 284

Query: 182 CYFQDDKPEAALKMFDKMKELGFEPNSVTFTVVVSSCARLLNLERGKEIHRELIDRSVLL 241
            Y + +  E +++MF +  +  F+P+ +T + V+ +C  L +L   K I+  ++    +L
Sbjct: 285 GYLKLEMVEESVRMFLENLDQ-FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVL 344

Query: 242 DAFVLSALVDMYGKCGCLEMAKEVFEQIPRKNAMTWNSMITGYSLKGDSRSCIELLMRMN 301
           ++ V + L+D+Y KCG +  A++VF  +  K+ ++WNS+I+GY   GD    ++L   M 
Sbjct: 345 ESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMM 404

Query: 302 YEGTEPTLTTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDLYFKCGSVS 361
               +    T   +I  S+R   L+ GK +H   +++ I +D+ +  +LID+Y KCG V 
Sbjct: 405 IMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVG 464

Query: 362 SAETVFRNVSKNDVVSWNVMISGYVMVGNHIQALRVYDNMKEHHVKPDAVTFSSTLSACS 421
            +  +F ++   D V+WN +IS  V  G+    L+V   M++  V PD  TF  TL  C+
Sbjct: 465 DSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCA 524

Query: 422 QLAALDKGRELHHCIISHKLESNEIVMGALLDMYAKCGDVNEARKLFHQLPERDLVSWTS 481
            LAA   G+E+H C++    ES   +  AL++MY+KCG +  + ++F ++  RD+V+WT 
Sbjct: 525 SLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTG 584

Query: 482 MITAYGSHGQASEALRLFDEMKKSNVRADSVTFLAVLSACSHAGLVDEGYIYFNEMITQY 541
           MI AYG +G+  +AL  F +M+KS +  DSV F+A++ ACSH+GLVDEG   F +M T Y
Sbjct: 585 MIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHY 644

Query: 542 DIRPGIEHYSCLIDLLGRAGRLHEAYEILERSEETRNDTGLLSTLFSACRLHNDFGLGIQ 601
            I P IEHY+C++DLL R+ ++ +A E ++ +   + D  + +++  ACR   D     +
Sbjct: 645 KIDPMIEHYACVVDLLSRSQKISKAEEFIQ-AMPIKPDASIWASVLRACRTSGDMETAER 704

Query: 602 IGKLLMEVHPDDPSTYILLSNMYASVNKWEEVRNVRRKMKELGLKKRPGCSWIEINQRIQ 661
           + + ++E++PDDP   IL SN YA++ KW++V  +R+ +K+  + K PG SWIE+ + + 
Sbjct: 705 VSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVH 764

Query: 662 PFFVEDKSNPVVDGVYECLSTLGCHMEK 689
            F   D S P  + +Y+ L  L   M K
Sbjct: 765 VFSSGDDSAPQSEAIYKSLEILYSLMAK 787

[Close]

BLAST of CmoCh20G001090.1 vs. Swiss-Prot
Match: PPR32_ARATH (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 2.6e-121
Identity = 229/679 (33.73%), Postives = 373/679 (54.93%), Query Frame = 1


Query: 10  LRTCASSKLLKQGKLIHQRIFCSGFQSNVTLCKALIGFYFSCYDYRSAELVFQTNDCPLD 69
           L  C+S K L+Q   I   +F +G          L+  +        A  VF+  D  L+
Sbjct: 44  LERCSSLKELRQ---ILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLN 103

Query: 70  VSLWNALLSAYTKSSRFVEALQLFDQLKSHSHVRPDCYTYPVVLKACGGLGRVVYGRRIH 129
           V L++ +L  + K S   +ALQ F +++ +  V P  Y +  +LK CG    +  G+ IH
Sbjct: 104 V-LYHTMLKGFAKVSDLDKALQFFVRMR-YDDVEPVVYNFTYLLKVCGDEAELRVGKEIH 163

Query: 130 NHLIKTGLIWDVFVGSSMMNMYAKCDQFHDAVDLFDEIPQRDVGCWNAVISCYFQDDKPE 189
             L+K+G   D+F  + + NMYAKC Q ++A  +FD +P+RD+  WN +++ Y Q+    
Sbjct: 164 GLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMAR 223

Query: 190 AALKMFDKMKELGFEPNSVTFTVVVSSCARLLNLERGKEIHRELIDRSVLLDAFVLSALV 249
            AL+M   M E   +P+ +T   V+ + + L  +  GKEIH   +         + +ALV
Sbjct: 224 MALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALV 283

Query: 250 DMYGKCGCLEMAKEVFEQIPRKNAMTWNSMITGYSLKGDSRSCIELLMRMNYEGTEPTLT 309
           DMY KCG LE A+++F+ +  +N ++WNSMI  Y    + +  + +  +M  EG +PT  
Sbjct: 284 DMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDV 343

Query: 310 TLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDLYFKCGSVSSAETVFRNV 369
           ++   ++A +    L  G+FIH   +   +D ++ +  SLI +Y KC  V +A ++F  +
Sbjct: 344 SVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKL 403

Query: 370 SKNDVVSWNVMISGYVMVGNHIQALRVYDNMKEHHVKPDAVTFSSTLSACSQLAALDKGR 429
               +VSWN MI G+   G  I AL  +  M+   VKPD  T+ S ++A ++L+     +
Sbjct: 404 QSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAK 463

Query: 430 ELHHCIISHKLESNEIVMGALLDMYAKCGDVNEARKLFHQLPERDLVSWTSMITAYGSHG 489
            +H  ++   L+ N  V  AL+DMYAKCG +  AR +F  + ER + +W +MI  YG+HG
Sbjct: 464 WIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHG 523

Query: 490 QASEALRLFDEMKKSNVRADSVTFLAVLSACSHAGLVDEGYIYFNEMITQYDIRPGIEHY 549
               AL LF+EM+K  ++ + VTFL+V+SACSH+GLV+ G   F  M   Y I   ++HY
Sbjct: 524 FGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHY 583

Query: 550 SCLIDLLGRAGRLHEAYEILERSEETRNDTGLLSTLFSACRLHNDFGLGIQIGKLLMEVH 609
             ++DLLGRAGRL+EA++ + +    +    +   +  AC++H +     +  + L E++
Sbjct: 584 GAMVDLLGRAGRLNEAWDFIMQM-PVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELN 643

Query: 610 PDDPSTYILLSNMYASVNKWEEVRNVRRKMKELGLKKRPGCSWIEINQRIQPFFVEDKSN 669
           PDD   ++LL+N+Y + + WE+V  VR  M   GL+K PGCS +EI   +  FF    ++
Sbjct: 644 PDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAH 703

Query: 670 PVVDGVYECLSTLGCHMEK 689
           P    +Y  L  L CH+++
Sbjct: 704 PDSKKIYAFLEKLICHIKE 716

[Close]

BLAST of CmoCh20G001090.1 vs. Swiss-Prot
Match: PP307_ARATH (Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2)

HSP 1 Score: 427.2 bits (1097), Expect = 3.5e-118
Identity = 225/675 (33.33%), Postives = 367/675 (54.37%), Query Frame = 1


Query: 8   SALRTCASSKLLKQGKLIHQRIFCSGFQSNVTLCKALIGFYFSCYDYRSAELVFQTNDCP 67
           S L  C   + L+ G+ +H  +   GF S+  +C AL+  YF   +  SAE +F +N   
Sbjct: 293 SVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIF-SNMSQ 352

Query: 68  LDVSLWNALLSAYTKSSRFVEALQLFDQLKSHSHVRPDCYTYPVVLKACGGLGRVVYGRR 127
            D   +N L++  ++     +A++LF ++     + PD  T   ++ AC   G +  G++
Sbjct: 353 RDAVTYNTLINGLSQCGYGEKAMELFKRMHLDG-LEPDSNTLASLVVACSADGTLFRGQQ 412

Query: 128 IHNHLIKTGLIWDVFVGSSMMNMYAKCDQFHDAVDLFDEIPQRDVGCWNAVISCYFQDDK 187
           +H +  K G   +  +  +++N+YAKC     A+D F E    +V  WN ++  Y   D 
Sbjct: 413 LHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDD 472

Query: 188 PEAALKMFDKMKELGFEPNSVTFTVVVSSCARLLNLERGKEIHRELIDRSVLLDAFVLSA 247
              + ++F +M+     PN  T+  ++ +C RL +LE G++IH ++I  +  L+A+V S 
Sbjct: 473 LRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSV 532

Query: 248 LVDMYGKCGCLEMAKEVFEQIPRKNAMTWNSMITGYSLKGDSRSCIELLMRMNYEGTEPT 307
           L+DMY K G L+ A ++  +   K+ ++W +MI GY+        +    +M   G    
Sbjct: 533 LIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSD 592

Query: 308 LTTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDLYFKCGSVSSAETVFR 367
              LT+ + A +    L+ G+ IH     +    D+    +L+ LY +CG +  +   F 
Sbjct: 593 EVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFE 652

Query: 368 NVSKNDVVSWNVMISGYVMVGNHIQALRVYDNMKEHHVKPDAVTFSSTLSACSQLAALDK 427
                D ++WN ++SG+   GN+ +ALRV+  M    +  +  TF S + A S+ A + +
Sbjct: 653 QTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQ 712

Query: 428 GRELHHCIISHKLESNEIVMGALLDMYAKCGDVNEARKLFHQLPERDLVSWTSMITAYGS 487
           G+++H  I     +S   V  AL+ MYAKCG +++A K F ++  ++ VSW ++I AY  
Sbjct: 713 GKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSK 772

Query: 488 HGQASEALRLFDEMKKSNVRADSVTFLAVLSACSHAGLVDEGYIYFNEMITQYDIRPGIE 547
           HG  SEAL  FD+M  SNVR + VT + VLSACSH GLVD+G  YF  M ++Y + P  E
Sbjct: 773 HGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPE 832

Query: 548 HYSCLIDLLGRAGRLHEAYEILERSEETRNDTGLLSTLFSACRLHNDFGLGIQIGKLLME 607
           HY C++D+L RAG L  A E ++     + D  +  TL SAC +H +  +G      L+E
Sbjct: 833 HYVCVVDMLTRAGLLSRAKEFIQEM-PIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLE 892

Query: 608 VHPDDPSTYILLSNMYASVNKWEEVRNVRRKMKELGLKKRPGCSWIEINQRIQPFFVEDK 667
           + P+D +TY+LLSN+YA   KW+     R+KMKE G+KK PG SWIE+   I  F+V D+
Sbjct: 893 LEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQ 952

Query: 668 SNPVVDGVYECLSTL 683
           ++P+ D ++E    L
Sbjct: 953 NHPLADEIHEYFQDL 964

[Close]

BLAST of CmoCh20G001090.1 vs. TrEMBL
Match: A0A0A0KK21_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G432790 PE=4 SV=1)

HSP 1 Score: 1268.4 bits (3281), Expect = 0.0e+00
Identity = 610/693 (88.02%), Postives = 654/693 (94.37%), Query Frame = 1


Query: 1   MDYMTLLSALRTCASSKLLKQGKLIHQRIFCSGFQSNVTLCKALIGFYFSCYDYRSAELV 60
           MDY+TLLSALRTC SSKLLKQGKLIHQRIF  GFQSN+ L K+LIGFYFSC+DY SAELV
Sbjct: 1   MDYVTLLSALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELV 60

Query: 61  FQTNDCPLDVSLWNALLSAYTKSSRFVEALQLFDQLKSHSHVRPDCYTYPVVLKACGGLG 120
           FQTNDCPLDVSLWNALLSAYT + RFVEALQLFDQL  +S+VRPD YTYPVVLKACGGLG
Sbjct: 61  FQTNDCPLDVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLG 120

Query: 121 RVVYGRRIHNHLIKTGLIWDVFVGSSMMNMYAKCDQFHDAVDLFDEIPQRDVGCWNAVIS 180
           RV+YGRRIHNHL+KTGLIWDVFVGSS+MNMYAKCDQF DA+ LFDE PQRDVGCWNAVIS
Sbjct: 121 RVIYGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVIS 180

Query: 181 CYFQDDKPEAALKMFDKMKELGFEPNSVTFTVVVSSCARLLNLERGKEIHRELIDRSVLL 240
           CYF+D K E ALK FDKMKELGFEPNSVTFTVVVSSC RLLNLERGKE+HRELI+R +LL
Sbjct: 181 CYFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRILL 240

Query: 241 DAFVLSALVDMYGKCGCLEMAKEVFEQIPRKNAMTWNSMITGYSLKGDSRSCIELLMRMN 300
           DAFVLSALVDMYGKCGCLEMAKEVFE+IPRKNA+TWN+MITGYSLKGDSRSCIELLMRMN
Sbjct: 241 DAFVLSALVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYSLKGDSRSCIELLMRMN 300

Query: 301 YEGTEPTLTTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDLYFKCGSVS 360
            EGT+PTL TLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLID YFKCG VS
Sbjct: 301 DEGTKPTLMTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVS 360

Query: 361 SAETVFRNVSKNDVVSWNVMISGYVMVGNHIQALRVYDNMKEHHVKPDAVTFSSTLSACS 420
           SAET+FR +SKN+VVSWNVMISG+VMVGNHIQAL +YDNMKEHHVKPDA+TFSSTLSACS
Sbjct: 361 SAETIFRTISKNEVVSWNVMISGHVMVGNHIQALHIYDNMKEHHVKPDALTFSSTLSACS 420

Query: 421 QLAALDKGRELHHCIISHKLESNEIVMGALLDMYAKCGDVNEARKLFHQLPERDLVSWTS 480
           QLAALDKGRELH+CII+HKLE+NEIVMGALLDMYAKCGDV+EARKLFHQLP+RDLVSWTS
Sbjct: 421 QLAALDKGRELHYCIINHKLEANEIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTS 480

Query: 481 MITAYGSHGQASEALRLFDEMKKSNVRADSVTFLAVLSACSHAGLVDEGYIYFNEMITQY 540
           MI AYGSHGQASEALRLFDEM+K NVRADSVTFLAVLSACSHAGLVDEGY+YFNEM+ QY
Sbjct: 481 MIFAYGSHGQASEALRLFDEMQKLNVRADSVTFLAVLSACSHAGLVDEGYMYFNEMVVQY 540

Query: 541 DIRPGIEHYSCLIDLLGRAGRLHEAYEILERSEETRNDTGLLSTLFSACRLHNDFGLGIQ 600
           DI+PGIEHYSCLIDLLGRAGRLHEAYEIL+RS+ETR+D GLLSTLFSAC LHN+F LGIQ
Sbjct: 541 DIKPGIEHYSCLIDLLGRAGRLHEAYEILQRSKETRSDIGLLSTLFSACLLHNNFVLGIQ 600

Query: 601 IGKLLMEVHPDDPSTYILLSNMYASVNKWEEVRNVRRKMKELGLKKRPGCSWIEINQRIQ 660
           IGK+L+EV PDDPSTYILLSNMYASVNKW+EVR VRRKMKELGLKK PGCSWIEINQRI 
Sbjct: 601 IGKMLIEVDPDDPSTYILLSNMYASVNKWDEVRKVRRKMKELGLKKSPGCSWIEINQRIH 660

Query: 661 PFFVEDKSNPVVDGVYECLSTLGCHMEKNELEV 694
           PFF EDKSNP+ DGVYECL+ LGCHMEKNELE+
Sbjct: 661 PFFAEDKSNPLADGVYECLNILGCHMEKNELEL 693

[Close]

BLAST of CmoCh20G001090.1 vs. TrEMBL
Match: F6HA18_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0009g03560 PE=4 SV=1)

HSP 1 Score: 956.4 bits (2471), Expect = 1.8e-275
Identity = 452/691 (65.41%), Postives = 559/691 (80.90%), Query Frame = 1


Query: 1   MDYMTLLSALRTCASSKLLKQGKLIHQRIFCSGFQSNVTLCKALIGFYFSCYDYRSAELV 60
           MD   LLS L+TC  SK LKQGKLIHQ+I   G Q+N+TLCK+LI  YFSC+ ++SA+LV
Sbjct: 1   MDTTKLLSLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLV 60

Query: 61  FQTNDCPLDVSLWNALLSAYTKSSRFVEALQLFDQLKSHSHVRPDCYTYPVVLKACGGLG 120
           FQT + PLD++LWN L++A TK+  F+E L++F +L    +++PD +TYP VLKAC GLG
Sbjct: 61  FQTIENPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLG 120

Query: 121 RVVYGRRIHNHLIKTGLIWDVFVGSSMMNMYAKCDQFHDAVDLFDEIPQRDVGCWNAVIS 180
           RV YG+ +H H+IK+G   DV V SS + MYAKC+ F DA+ LFDE+P+RDV  WN VIS
Sbjct: 121 RVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVIS 180

Query: 181 CYFQDDKPEAALKMFDKMKELGFEPNSVTFTVVVSSCARLLNLERGKEIHRELIDRSVLL 240
           CY+QD +PE AL++F++MK  GF+P+SVT T V+SSCARLL+LERGKEIH EL+     L
Sbjct: 181 CYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFAL 240

Query: 241 DAFVLSALVDMYGKCGCLEMAKEVFEQIPRKNAMTWNSMITGYSLKGDSRSCIELLMRMN 300
           D FV SALVDMYGKCGCLEMAKEVFEQI RKN ++WNSMI GYSLKGDS+SCIEL  RM+
Sbjct: 241 DGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMD 300

Query: 301 YEGTEPTLTTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDLYFKCGSVS 360
            EG  PTLTTL+SI+ A SRSV L+ GKFIHGYI+RNR++ DIF++ SLIDLYFKCG++ 
Sbjct: 301 EEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIG 360

Query: 361 SAETVFRNVSKNDVVSWNVMISGYVMVGNHIQALRVYDNMKEHHVKPDAVTFSSTLSACS 420
           SAE VF+N+ K +VVSWNVMISGYV VG++++AL ++ +M++  VKPDA+TF+S L ACS
Sbjct: 361 SAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACS 420

Query: 421 QLAALDKGRELHHCIISHKLESNEIVMGALLDMYAKCGDVNEARKLFHQLPERDLVSWTS 480
           QLA L+KG+E+H+ II  KLE NE+VMGALLDMYAKCG V+EA  +F+QLPERD VSWTS
Sbjct: 421 QLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTS 480

Query: 481 MITAYGSHGQASEALRLFDEMKKSNVRADSVTFLAVLSACSHAGLVDEGYIYFNEMITQY 540
           MI AYGSHGQA EAL+LF++M++S+ + D VTFLA+LSACSHAGLVDEG  YFN+MI +Y
Sbjct: 481 MIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEY 540

Query: 541 DIRPGIEHYSCLIDLLGRAGRLHEAYEILERSEETRNDTGLLSTLFSACRLHNDFGLGIQ 600
             +P +EHYSCLIDLLGR GRL EAYEIL+R+ + R D GLLSTLFSAC LH    LG Q
Sbjct: 541 GFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQ 600

Query: 601 IGKLLMEVHPDDPSTYILLSNMYASVNKWEEVRNVRRKMKELGLKKRPGCSWIEINQRIQ 660
           IG+LL+E  PDDPSTYI+LSNMYASV KW+EVR VR K+KELGLKK PGCSWIE+ +RI 
Sbjct: 601 IGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKNPGCSWIEVGKRIH 660

Query: 661 PFFVEDKSNPVVDGVYECLSTLGCHMEKNEL 692
           PF VEDKS+P  D +YEC+S L  H+EK ++
Sbjct: 661 PFVVEDKSHPQADMIYECMSILASHVEKYQV 691

[Close]

BLAST of CmoCh20G001090.1 vs. TrEMBL
Match: A5BMC7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_041405 PE=4 SV=1)

HSP 1 Score: 934.9 bits (2415), Expect = 5.7e-269
Identity = 439/670 (65.52%), Postives = 545/670 (81.34%), Query Frame = 1


Query: 22  GKLIHQRIFCSGFQSNVTLCKALIGFYFSCYDYRSAELVFQTNDCPLDVSLWNALLSAYT 81
           GKLIHQ+I   G Q+N+TLCK+LI  YFSC+ ++SA+LVFQT + PLD++LWN L++A T
Sbjct: 214 GKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPLDITLWNGLMAACT 273

Query: 82  KSSRFVEALQLFDQLKSHSHVRPDCYTYPVVLKACGGLGRVVYGRRIHNHLIKTGLIWDV 141
           K+  F+E L++F +L    +++PD +TYP VLKAC GLGRV YG+ +H H+IK+G   DV
Sbjct: 274 KNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDV 333

Query: 142 FVGSSMMNMYAKCDQFHDAVDLFDEIPQRDVGCWNAVISCYFQDDKPEAALKMFDKMKEL 201
            V SS + MYAKC+ F DA+ LFDE+P+RDV  WN VISCY+QD +PE AL++F++MK  
Sbjct: 334 VVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVS 393

Query: 202 GFEPNSVTFTVVVSSCARLLNLERGKEIHRELIDRSVLLDAFVLSALVDMYGKCGCLEMA 261
           GF+P+SVT T V+SSCARLL+LERGKEIH EL+     LD FV SALVDMYGKCGCLEMA
Sbjct: 394 GFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMA 453

Query: 262 KEVFEQIPRKNAMTWNSMITGYSLKGDSRSCIELLMRMNYEGTEPTLTTLTSIIYASSRS 321
           KEVFEQI RKN ++WNSMI GYSLKGDS+SCIEL  RM+ EG  PTLTTL+SI+ A SRS
Sbjct: 454 KEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRS 513

Query: 322 VQLRHGKFIHGYILRNRIDVDIFIDVSLIDLYFKCGSVSSAETVFRNVSKNDVVSWNVMI 381
           V L+ GKFIHGYI+RNR++ DIF++ SLIDLYFKCG++ SAE VF+N+ K +VVSWNVMI
Sbjct: 514 VNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMI 573

Query: 382 SGYVMVGNHIQALRVYDNMKEHHVKPDAVTFSSTLSACSQLAALDKGRELHHCIISHKLE 441
           SGYV VG++++AL ++ +M++  VKPDA+TF+S L ACSQLA L+KG+E+H+ II  KLE
Sbjct: 574 SGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLE 633

Query: 442 SNEIVMGALLDMYAKCGDVNEARKLFHQLPERDLVSWTSMITAYGSHGQASEALRLFDEM 501
            NE+VMGALLDMYAKCG V+EA  +F+QLPERD VSWTSMI AYGSHGQA EAL+LF++M
Sbjct: 634 INEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKM 693

Query: 502 KKSNVRADSVTFLAVLSACSHAGLVDEGYIYFNEMITQYDIRPGIEHYSCLIDLLGRAGR 561
           ++S+ + D VTFLA+LSACSHAGLVDEG  YFN+MI +Y  +P +EHYSCLIDLLGR GR
Sbjct: 694 QQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGR 753

Query: 562 LHEAYEILERSEETRNDTGLLSTLFSACRLHNDFGLGIQIGKLLMEVHPDDPSTYILLSN 621
           L EAYEIL+R+ + R D GLLSTLFSAC LH    LG QIG+LL+E  PDDPSTYI+LSN
Sbjct: 754 LREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSN 813

Query: 622 MYASVNKWEEVRNVRRKMKELGLKKRPGCSWIEINQRIQPFFVEDKSNPVVDGVYECLST 681
           MYASV KW+EVR VR K+KELGLKK PGCSWIE+ +RI PF VEDKS+P  D +YEC+S 
Sbjct: 814 MYASVKKWDEVRKVRLKIKELGLKKNPGCSWIEVGKRIHPFVVEDKSHPQADMIYECMSI 873

Query: 682 LGCHMEKNEL 692
           L  H+EK ++
Sbjct: 874 LASHVEKYQV 883

[Close]

BLAST of CmoCh20G001090.1 vs. TrEMBL
Match: A0A067DTR2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g005487mg PE=4 SV=1)

HSP 1 Score: 928.3 bits (2398), Expect = 5.4e-267
Identity = 443/691 (64.11%), Postives = 547/691 (79.16%), Query Frame = 1


Query: 1   MDYMTLLSALRTCASSKLLKQGKLIHQRIFCSGFQSNVTLCKALIGFYFSCYDYRSAELV 60
           M+   +L+ LRTC  SK LK+GK+IHQ++   G Q+N+ LCK+LI  YFSC +Y  A LV
Sbjct: 1   MNITRILTLLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLV 60

Query: 61  FQTNDCPLDVSLWNALLSAYTKSSRFVEALQLFDQLKSHSHVRPDCYTYPVVLKACGGLG 120
           F+T D PLD+SLWN L+++YTK+  ++ AL+LFD L  + +++PD YTYP VLKACGGLG
Sbjct: 61  FKTIDNPLDLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLG 120

Query: 121 RVVYGRRIHNHLIKTGLIWDVFVGSSMMNMYAKCDQFHDAVDLFDEIPQRDVGCWNAVIS 180
            V  G+ IH HLIKTG + DV + SS   MYAKC+ F  AV +FDE+ +RDV  WN VIS
Sbjct: 121 SVGIGKMIHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVIS 180

Query: 181 CYFQDDKPEAALKMFDKMKELGFEPNSVTFTVVVSSCARLLNLERGKEIHRELIDRSVLL 240
           CY+QD + E AL++F KM+  GF+PNSVT T V+SSCARL++L+RGKEIH+E I    + 
Sbjct: 181 CYYQDGQAEKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVS 240

Query: 241 DAFVLSALVDMYGKCGCLEMAKEVFEQIPRKNAMTWNSMITGYSLKGDSRSCIELLMRMN 300
           D+++ SALVDMYGKCGCLEMA+EVFEQ   K+ + WN++I GYS +GDS+SC++L  RMN
Sbjct: 241 DSYISSALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMN 300

Query: 301 YEGTEPTLTTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDLYFKCGSVS 360
            EG +PTLTT++S++ + SRS QL+HGK +HGYI+RN+I  D+FI+ SLIDLYFKCG VS
Sbjct: 301 EEGIKPTLTTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVS 360

Query: 361 SAETVFRNVSKNDVVSWNVMISGYVMVGNHIQALRVYDNMKEHHVKPDAVTFSSTLSACS 420
           SAE VF  +SK DVV WNVMISGYV VG++ +AL +Y +MKE   KPDAVTF+S L ACS
Sbjct: 361 SAENVFEKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACS 420

Query: 421 QLAALDKGRELHHCIISHKLESNEIVMGALLDMYAKCGDVNEARKLFHQLPERDLVSWTS 480
           QLAAL+KG+E+H+ II  KLE+NEIVMGALLDMYAKCG V+EA K+F++LPERDLVSWTS
Sbjct: 421 QLAALEKGKEIHNHIIESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSWTS 480

Query: 481 MITAYGSHGQASEALRLFDEMKKSNVRADSVTFLAVLSACSHAGLVDEGYIYFNEMITQY 540
           MI AYGSHG+A EAL+LF EM++SN R DS+TFLA+LSACSHAG VDEG  YFN MI++Y
Sbjct: 481 MIAAYGSHGRALEALKLFGEMQQSNARPDSITFLALLSACSHAGWVDEGGYYFNLMISEY 540

Query: 541 DIRPGIEHYSCLIDLLGRAGRLHEAYEILERSEETRNDTGLLSTLFSACRLHNDFGLGIQ 600
           +I+P  EHYSCLIDLLGRAGRL EAY IL+ + E R D GLLSTLFSACRLH D  +G +
Sbjct: 541 NIQPRNEHYSCLIDLLGRAGRLQEAYGILQSTPEIREDAGLLSTLFSACRLHRDIEMGEK 600

Query: 601 IGKLLMEVHPDDPSTYILLSNMYASVNKWEEVRNVRRKMKELGLKKRPGCSWIEINQRIQ 660
           I KLL+E  PDD STYI+LSNMYASV KW+EVR +R KMKELGL+K PGCSWIEI  RIQ
Sbjct: 601 IAKLLIEKDPDDSSTYIVLSNMYASVKKWDEVRKIRLKMKELGLRKNPGCSWIEIGDRIQ 660

Query: 661 PFFVEDKSNPVVDGVYECLSTLGCHMEKNEL 692
           PFF EDK  P  D VYECL+ L  HMEK+EL
Sbjct: 661 PFFAEDKFYPQADMVYECLAILAGHMEKDEL 691

[Close]

BLAST of CmoCh20G001090.1 vs. TrEMBL
Match: A0A0D2QXE3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G014500 PE=4 SV=1)

HSP 1 Score: 914.1 bits (2361), Expect = 1.1e-262
Identity = 446/691 (64.54%), Postives = 545/691 (78.87%), Query Frame = 1


Query: 1   MDYMTLLSALRTCASSKLLKQGKLIHQRIFCSGFQSNVTLCKALIGFYFSCYDYRSAELV 60
           MD +  LS L+TC S   L +GKLIHQ+I  SGF +N+ LCK LI FYFSC  +RSA  V
Sbjct: 1   MDTVKFLSLLKTCKS---LIKGKLIHQKIITSGFHNNIALCKTLIAFYFSCNLHRSAGRV 60

Query: 61  FQTNDCPLDVSLWNALLSAYTKSSRFVEALQLFDQLKSHSHVRPDCYTYPVVLKACGGLG 120
           F T D P D+SLWN L++AYTKS  FVE ++LFD+L  +  ++P+ +TYP +LKACGGLG
Sbjct: 61  FDTIDNPSDISLWNTLMAAYTKSFMFVETIKLFDKLWKYPLLKPNGFTYPSLLKACGGLG 120

Query: 121 RVVYGRRIHNHLIKTGLIWDVFVGSSMMNMYAKCDQFHDAVDLFDEIPQRDVGCWNAVIS 180
            V YG  IH HLIK G + DV +GSS++ MYAKC+ F +A  +FDE+P+RDV CWN VIS
Sbjct: 121 AVGYGEMIHTHLIKVGFLSDVVIGSSVVAMYAKCNMFEEATHVFDEMPERDVACWNTVIS 180

Query: 181 CYFQDDKPEAALKMFDKMKELGFEPNSVTFTVVVSSCARLLNLERGKEIHRELIDRSVLL 240
           CY QD K E AL++F+KM++ G EPN VT T+V+SSCARL++LERGK+IHREL++  + L
Sbjct: 181 CYNQDGKAEKALELFEKMRDDGLEPNLVTLTIVISSCARLMDLERGKKIHRELVETGIGL 240

Query: 241 DAFVLSALVDMYGKCGCLEMAKEVFEQIPRK--NAMTWNSMITGYSLKGDSRSCIELLMR 300
           D F+ SALVDMYGKCGC+E+A+EVFEQIP+K  N +TWN+MI GYS  G+S+SCIEL  +
Sbjct: 241 DGFLGSALVDMYGKCGCIEIAREVFEQIPKKDVNVITWNTMIAGYSSIGNSQSCIELFKK 300

Query: 301 MNYEGTEPTLTTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDLYFKCGS 360
           MN EG EP+LTTL+SII A SRS QLR+GKF HGY++RN I+ DIF++ SLIDLYFKCG+
Sbjct: 301 MNVEGIEPSLTTLSSIIIACSRSAQLRYGKFTHGYMIRNMIETDIFVNNSLIDLYFKCGN 360

Query: 361 VSSAETVFRNVSKNDVVSWNVMISGYVMVGNHIQALRVYDNMKEHHVKPDAVTFSSTLSA 420
           V  AE VF+ + K DVVSWNVMISGYV VG    AL +YD+M +  VK DAVT+SS L+A
Sbjct: 361 VHLAENVFKLMPKTDVVSWNVMISGYVSVGKCFDALGIYDSMVKAGVKLDAVTYSSGLAA 420

Query: 421 CSQLAALDKGRELHHCIISHKLESNEIVMGALLDMYAKCGDVNEARKLFHQLPERDLVSW 480
           CSQLAAL+KG+E+H  II +KLE NE+VMG LLDMYAKCG V+EA  +F  LPERDLVSW
Sbjct: 421 CSQLAALEKGKEIHSSIIENKLERNEVVMGTLLDMYAKCGAVDEAYIIFRDLPERDLVSW 480

Query: 481 TSMITAYGSHGQASEALRLFDEMKKSNVRADSVTFLAVLSACSHAGLVDEGYIYFNEMIT 540
           TSMITAYGSHG+ASEAL LFD+M+KSN ++D VTFLAVLSACSH GLVDEG  YF++MI 
Sbjct: 481 TSMITAYGSHGRASEALNLFDKMQKSNTKSDGVTFLAVLSACSHGGLVDEGCSYFHQMIN 540

Query: 541 QYDIRPGIEHYSCLIDLLGRAGRLHEAYEILERSEETRNDTGLLSTLFSACRLHNDFGLG 600
           ++ I+P  EHYSCLIDLLGRAGRLHEAYEIL+ + ETR D  LLSTL SACRLH    LG
Sbjct: 541 EHSIKPQREHYSCLIDLLGRAGRLHEAYEILQSTRETREDVELLSTLLSACRLHRCLELG 600

Query: 601 IQIGKLLMEVHPDDPSTYILLSNMYASVNKWEEVRNVRRKMKELGLKKRPGCSWIEINQR 660
            +I  LL++  PDD STYI+LSNMYAS  KW +VR VR KMKELGL+K PGCSWIE+++R
Sbjct: 601 EKIAGLLIKKDPDDSSTYIVLSNMYASAKKWSKVREVRLKMKELGLRKNPGCSWIEVDRR 660

Query: 661 IQPFFVEDKSNPVVDGVYECLSTLGCHMEKN 690
           IQPFFVED S+P    +YECLS L  +MEK+
Sbjct: 661 IQPFFVEDNSHPESKIMYECLSCLNSYMEKD 688

[Close]

BLAST of CmoCh20G001090.1 vs. TAIR10
Match: AT5G27110.1 (AT5G27110.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 786.2 bits (2029), Expect = 1.7e-227
Identity = 376/691 (54.41%), Postives = 512/691 (74.10%), Query Frame = 1


Query: 1   MDYMTLLSALRTCASS-KLLKQGKLIHQRIFCSGFQSNVTLCKALIGFYFSCYDYRSAEL 60
           M+   LLS LR C +S K L++ KL+HQRI   G + +V LCK+LI  YF+C D+ SA  
Sbjct: 1   MESSKLLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARH 60

Query: 61  VFQTNDCPLDVSLWNALLSAYTKSSRFVEALQLFDQLKSHSHVRPDCYTYPVVLKACGGL 120
           VF+  D   DV +WN+L+S Y+K+S F + L++F +L + S   PD +T+P V+KA G L
Sbjct: 61  VFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGAL 120

Query: 121 GRVVYGRRIHNHLIKTGLIWDVFVGSSMMNMYAKCDQFHDAVDLFDEIPQRDVGCWNAVI 180
           GR   GR IH  ++K+G + DV V SS++ MYAK + F +++ +FDE+P+RDV  WN VI
Sbjct: 121 GREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVI 180

Query: 181 SCYFQDDKPEAALKMFDKMKELGFEPNSVTFTVVVSSCARLLNLERGKEIHRELIDRSVL 240
           SC++Q  + E AL++F +M+  GFEPNSV+ TV +S+C+RLL LERGKEIHR+ + +   
Sbjct: 181 SCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFE 240

Query: 241 LDAFVLSALVDMYGKCGCLEMAKEVFEQIPRKNAMTWNSMITGYSLKGDSRSCIELLMRM 300
           LD +V SALVDMYGKC CLE+A+EVF+++PRK+ + WNSMI GY  KGDS+SC+E+L RM
Sbjct: 241 LDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRM 300

Query: 301 NYEGTEPTLTTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDLYFKCGSV 360
             EGT P+ TTLTSI+ A SRS  L HGKFIHGY++R+ ++ DI+++ SLIDLYFKCG  
Sbjct: 301 IIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEA 360

Query: 361 SSAETVFRNVSKNDVVSWNVMISGYVMVGNHIQALRVYDNMKEHHVKPDAVTFSSTLSAC 420
           + AETVF    K+   SWNVMIS Y+ VGN  +A+ VYD M    VKPD VTF+S L AC
Sbjct: 361 NLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPAC 420

Query: 421 SQLAALDKGRELHHCIISHKLESNEIVMGALLDMYAKCGDVNEARKLFHQLPERDLVSWT 480
           SQLAAL+KG+++H  I   +LE++E+++ ALLDMY+KCG+  EA ++F+ +P++D+VSWT
Sbjct: 421 SQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWT 480

Query: 481 SMITAYGSHGQASEALRLFDEMKKSNVRADSVTFLAVLSACSHAGLVDEGYIYFNEMITQ 540
            MI+AYGSHGQ  EAL  FDEM+K  ++ D VT LAVLSAC HAGL+DEG  +F++M ++
Sbjct: 481 VMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSK 540

Query: 541 YDIRPGIEHYSCLIDLLGRAGRLHEAYEILERSEETRNDTGLLSTLFSACRLHNDFGLGI 600
           Y I P IEHYSC+ID+LGRAGRL EAYEI++++ ET ++  LLSTLFSAC LH +  LG 
Sbjct: 541 YGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGD 600

Query: 601 QIGKLLMEVHPDDPSTYILLSNMYASVNKWEEVRNVRRKMKELGLKKRPGCSWIEINQRI 660
           +I +LL+E +PDD STY++L N+YAS   W+  R VR KMKE+GL+K+PGCSWIE++ ++
Sbjct: 601 RIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKV 660

Query: 661 QPFFVEDKSNPVVDGVYECLSTLGCHMEKNE 691
             FF ED+S+   + VYECL+ L  HME  +
Sbjct: 661 CHFFAEDRSHLRAENVYECLALLSGHMESGQ 691

[Close]

BLAST of CmoCh20G001090.1 vs. TAIR10
Match: AT4G18750.1 (AT4G18750.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 461.5 bits (1186), Expect = 9.4e-130
Identity = 245/688 (35.61%), Postives = 391/688 (56.83%), Query Frame = 1


Query: 1   MDYMTLLSALRTCASSKLLKQGKLIHQRIFCSGFQSNVTLCKALIGFYFSCYDYRSAELV 60
           +D  TL S L+ CA SK LK GK +   I  +GF  +  L   L   Y +C D + A  V
Sbjct: 92  IDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRV 151

Query: 61  FQTNDCPLDVSL-WNALLSAYTKSSRFVEALQLFDQLKSHSHVRPDCYTYPVVLKACGGL 120
           F  ++  ++ +L WN L++   KS  F  ++ LF ++ S S V  D YT+  V K+   L
Sbjct: 152 F--DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMS-SGVEMDSYTFSCVSKSFSSL 211

Query: 121 GRVVYGRRIHNHLIKTGLIWDVFVGSSMMNMYAKCDQFHDAVDLFDEIPQRDVGCWNAVI 180
             V  G ++H  ++K+G      VG+S++  Y K  +   A  +FDE+ +RDV  WN++I
Sbjct: 212 RSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSII 271

Query: 181 SCYFQDDKPEAALKMFDKMKELGFEPNSVTFTVVVSSCARLLNLERGKEIHRELIDRSVL 240
           + Y  +   E  L +F +M   G E +  T   V + CA    +  G+ +H   +     
Sbjct: 272 NGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFS 331

Query: 241 LDAFVLSALVDMYGKCGCLEMAKEVFEQIPRKNAMTWNSMITGYSLKGDSRSCIELLMRM 300
            +    + L+DMY KCG L+ AK VF ++  ++ +++ SMI GY+ +G +   ++L   M
Sbjct: 332 REDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEM 391

Query: 301 NYEGTEPTLTTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDLYFKCGSV 360
             EG  P + T+T+++   +R   L  GK +H +I  N +  DIF+  +L+D+Y KCGS+
Sbjct: 392 EEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSM 451

Query: 361 SSAETVFRNVSKNDVVSWNVMISGYVMVGNHIQALRVYD-NMKEHHVKPDAVTFSSTLSA 420
             AE VF  +   D++SWN +I GY       +AL +++  ++E    PD  T +  L A
Sbjct: 452 QEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPA 511

Query: 421 CSQLAALDKGRELHHCIISHKLESNEIVMGALLDMYAKCGDVNEARKLFHQLPERDLVSW 480
           C+ L+A DKGRE+H  I+ +   S+  V  +L+DMYAKCG +  A  LF  +  +DLVSW
Sbjct: 512 CASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSW 571

Query: 481 TSMITAYGSHGQASEALRLFDEMKKSNVRADSVTFLAVLSACSHAGLVDEGYIYFNEMIT 540
           T MI  YG HG   EA+ LF++M+++ + AD ++F+++L ACSH+GLVDEG+ +FN M  
Sbjct: 572 TVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRH 631

Query: 541 QYDIRPGIEHYSCLIDLLGRAGRLHEAYEILERSEETRNDTGLLSTLFSACRLHNDFGLG 600
           +  I P +EHY+C++D+L R G L +AY  +E +     D  +   L   CR+H+D  L 
Sbjct: 632 ECKIEPTVEHYACIVDMLARTGDLIKAYRFIE-NMPIPPDATIWGALLCGCRIHHDVKLA 691

Query: 601 IQIGKLLMEVHPDDPSTYILLSNMYASVNKWEEVRNVRRKMKELGLKKRPGCSWIEINQR 660
            ++ + + E+ P++   Y+L++N+YA   KWE+V+ +R+++ + GL+K PGCSWIEI  R
Sbjct: 692 EKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGR 751

Query: 661 IQPFFVEDKSNPVVDGVYECLSTLGCHM 687
           +  F   D SNP  + +   L  +   M
Sbjct: 752 VNIFVAGDSSNPETENIEAFLRKVRARM 775

[Close]

BLAST of CmoCh20G001090.1 vs. TAIR10
Match: AT3G03580.1 (AT3G03580.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 440.3 bits (1131), Expect = 2.2e-123
Identity = 233/688 (33.87%), Postives = 395/688 (57.41%), Query Frame = 1


Query: 2   DYMTLLSALRTCASSKLLKQGKLIHQRIFCSGFQSNVTLCKALIGFYFSCYDYRSAELVF 61
           D  T  S ++ CA     + G L++++I   GF+S++ +  AL+  Y        A  VF
Sbjct: 105 DKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVF 164

Query: 62  QTNDCPL-DVSLWNALLSAYTKSSRFVEALQLFDQLKSHSHVRPDCYTYPVVLKACGGLG 121
             ++ P+ D+  WN+L+S Y+    + EAL+++ +LK+ S + PD +T   VL A G L 
Sbjct: 165 --DEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKN-SWIVPDSFTVSSVLPAFGNLL 224

Query: 122 RVVYGRRIHNHLIKTGLIWDVFVGSSMMNMYAKCDQFHDAVDLFDEIPQRDVGCWNAVIS 181
            V  G+ +H   +K+G+   V V + ++ MY K  +  DA  +FDE+  RD   +N +I 
Sbjct: 225 VVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMIC 284

Query: 182 CYFQDDKPEAALKMFDKMKELGFEPNSVTFTVVVSSCARLLNLERGKEIHRELIDRSVLL 241
            Y + +  E +++MF +  +  F+P+ +T + V+ +C  L +L   K I+  ++    +L
Sbjct: 285 GYLKLEMVEESVRMFLENLDQ-FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVL 344

Query: 242 DAFVLSALVDMYGKCGCLEMAKEVFEQIPRKNAMTWNSMITGYSLKGDSRSCIELLMRMN 301
           ++ V + L+D+Y KCG +  A++VF  +  K+ ++WNS+I+GY   GD    ++L   M 
Sbjct: 345 ESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMM 404

Query: 302 YEGTEPTLTTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDLYFKCGSVS 361
               +    T   +I  S+R   L+ GK +H   +++ I +D+ +  +LID+Y KCG V 
Sbjct: 405 IMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVG 464

Query: 362 SAETVFRNVSKNDVVSWNVMISGYVMVGNHIQALRVYDNMKEHHVKPDAVTFSSTLSACS 421
            +  +F ++   D V+WN +IS  V  G+    L+V   M++  V PD  TF  TL  C+
Sbjct: 465 DSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCA 524

Query: 422 QLAALDKGRELHHCIISHKLESNEIVMGALLDMYAKCGDVNEARKLFHQLPERDLVSWTS 481
            LAA   G+E+H C++    ES   +  AL++MY+KCG +  + ++F ++  RD+V+WT 
Sbjct: 525 SLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTG 584

Query: 482 MITAYGSHGQASEALRLFDEMKKSNVRADSVTFLAVLSACSHAGLVDEGYIYFNEMITQY 541
           MI AYG +G+  +AL  F +M+KS +  DSV F+A++ ACSH+GLVDEG   F +M T Y
Sbjct: 585 MIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHY 644

Query: 542 DIRPGIEHYSCLIDLLGRAGRLHEAYEILERSEETRNDTGLLSTLFSACRLHNDFGLGIQ 601
            I P IEHY+C++DLL R+ ++ +A E ++ +   + D  + +++  ACR   D     +
Sbjct: 645 KIDPMIEHYACVVDLLSRSQKISKAEEFIQ-AMPIKPDASIWASVLRACRTSGDMETAER 704

Query: 602 IGKLLMEVHPDDPSTYILLSNMYASVNKWEEVRNVRRKMKELGLKKRPGCSWIEINQRIQ 661
           + + ++E++PDDP   IL SN YA++ KW++V  +R+ +K+  + K PG SWIE+ + + 
Sbjct: 705 VSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVH 764

Query: 662 PFFVEDKSNPVVDGVYECLSTLGCHMEK 689
            F   D S P  + +Y+ L  L   M K
Sbjct: 765 VFSSGDDSAPQSEAIYKSLEILYSLMAK 787

[Close]

BLAST of CmoCh20G001090.1 vs. TAIR10
Match: AT1G11290.1 (AT1G11290.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 437.6 bits (1124), Expect = 1.5e-122
Identity = 229/679 (33.73%), Postives = 373/679 (54.93%), Query Frame = 1


Query: 10  LRTCASSKLLKQGKLIHQRIFCSGFQSNVTLCKALIGFYFSCYDYRSAELVFQTNDCPLD 69
           L  C+S K L+Q   I   +F +G          L+  +        A  VF+  D  L+
Sbjct: 44  LERCSSLKELRQ---ILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLN 103

Query: 70  VSLWNALLSAYTKSSRFVEALQLFDQLKSHSHVRPDCYTYPVVLKACGGLGRVVYGRRIH 129
           V L++ +L  + K S   +ALQ F +++ +  V P  Y +  +LK CG    +  G+ IH
Sbjct: 104 V-LYHTMLKGFAKVSDLDKALQFFVRMR-YDDVEPVVYNFTYLLKVCGDEAELRVGKEIH 163

Query: 130 NHLIKTGLIWDVFVGSSMMNMYAKCDQFHDAVDLFDEIPQRDVGCWNAVISCYFQDDKPE 189
             L+K+G   D+F  + + NMYAKC Q ++A  +FD +P+RD+  WN +++ Y Q+    
Sbjct: 164 GLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMAR 223

Query: 190 AALKMFDKMKELGFEPNSVTFTVVVSSCARLLNLERGKEIHRELIDRSVLLDAFVLSALV 249
            AL+M   M E   +P+ +T   V+ + + L  +  GKEIH   +         + +ALV
Sbjct: 224 MALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALV 283

Query: 250 DMYGKCGCLEMAKEVFEQIPRKNAMTWNSMITGYSLKGDSRSCIELLMRMNYEGTEPTLT 309
           DMY KCG LE A+++F+ +  +N ++WNSMI  Y    + +  + +  +M  EG +PT  
Sbjct: 284 DMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDV 343

Query: 310 TLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDLYFKCGSVSSAETVFRNV 369
           ++   ++A +    L  G+FIH   +   +D ++ +  SLI +Y KC  V +A ++F  +
Sbjct: 344 SVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKL 403

Query: 370 SKNDVVSWNVMISGYVMVGNHIQALRVYDNMKEHHVKPDAVTFSSTLSACSQLAALDKGR 429
               +VSWN MI G+   G  I AL  +  M+   VKPD  T+ S ++A ++L+     +
Sbjct: 404 QSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAK 463

Query: 430 ELHHCIISHKLESNEIVMGALLDMYAKCGDVNEARKLFHQLPERDLVSWTSMITAYGSHG 489
            +H  ++   L+ N  V  AL+DMYAKCG +  AR +F  + ER + +W +MI  YG+HG
Sbjct: 464 WIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHG 523

Query: 490 QASEALRLFDEMKKSNVRADSVTFLAVLSACSHAGLVDEGYIYFNEMITQYDIRPGIEHY 549
               AL LF+EM+K  ++ + VTFL+V+SACSH+GLV+ G   F  M   Y I   ++HY
Sbjct: 524 FGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHY 583

Query: 550 SCLIDLLGRAGRLHEAYEILERSEETRNDTGLLSTLFSACRLHNDFGLGIQIGKLLMEVH 609
             ++DLLGRAGRL+EA++ + +    +    +   +  AC++H +     +  + L E++
Sbjct: 584 GAMVDLLGRAGRLNEAWDFIMQM-PVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELN 643

Query: 610 PDDPSTYILLSNMYASVNKWEEVRNVRRKMKELGLKKRPGCSWIEINQRIQPFFVEDKSN 669
           PDD   ++LL+N+Y + + WE+V  VR  M   GL+K PGCS +EI   +  FF    ++
Sbjct: 644 PDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAH 703

Query: 670 PVVDGVYECLSTLGCHMEK 689
           P    +Y  L  L CH+++
Sbjct: 704 PDSKKIYAFLEKLICHIKE 716

[Close]

BLAST of CmoCh20G001090.1 vs. TAIR10
Match: AT4G13650.1 (AT4G13650.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 427.2 bits (1097), Expect = 2.0e-119
Identity = 225/675 (33.33%), Postives = 367/675 (54.37%), Query Frame = 1


Query: 8   SALRTCASSKLLKQGKLIHQRIFCSGFQSNVTLCKALIGFYFSCYDYRSAELVFQTNDCP 67
           S L  C   + L+ G+ +H  +   GF S+  +C AL+  YF   +  SAE +F +N   
Sbjct: 293 SVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIF-SNMSQ 352

Query: 68  LDVSLWNALLSAYTKSSRFVEALQLFDQLKSHSHVRPDCYTYPVVLKACGGLGRVVYGRR 127
            D   +N L++  ++     +A++LF ++     + PD  T   ++ AC   G +  G++
Sbjct: 353 RDAVTYNTLINGLSQCGYGEKAMELFKRMHLDG-LEPDSNTLASLVVACSADGTLFRGQQ 412

Query: 128 IHNHLIKTGLIWDVFVGSSMMNMYAKCDQFHDAVDLFDEIPQRDVGCWNAVISCYFQDDK 187
           +H +  K G   +  +  +++N+YAKC     A+D F E    +V  WN ++  Y   D 
Sbjct: 413 LHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDD 472

Query: 188 PEAALKMFDKMKELGFEPNSVTFTVVVSSCARLLNLERGKEIHRELIDRSVLLDAFVLSA 247
              + ++F +M+     PN  T+  ++ +C RL +LE G++IH ++I  +  L+A+V S 
Sbjct: 473 LRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSV 532

Query: 248 LVDMYGKCGCLEMAKEVFEQIPRKNAMTWNSMITGYSLKGDSRSCIELLMRMNYEGTEPT 307
           L+DMY K G L+ A ++  +   K+ ++W +MI GY+        +    +M   G    
Sbjct: 533 LIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSD 592

Query: 308 LTTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDLYFKCGSVSSAETVFR 367
              LT+ + A +    L+ G+ IH     +    D+    +L+ LY +CG +  +   F 
Sbjct: 593 EVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFE 652

Query: 368 NVSKNDVVSWNVMISGYVMVGNHIQALRVYDNMKEHHVKPDAVTFSSTLSACSQLAALDK 427
                D ++WN ++SG+   GN+ +ALRV+  M    +  +  TF S + A S+ A + +
Sbjct: 653 QTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQ 712

Query: 428 GRELHHCIISHKLESNEIVMGALLDMYAKCGDVNEARKLFHQLPERDLVSWTSMITAYGS 487
           G+++H  I     +S   V  AL+ MYAKCG +++A K F ++  ++ VSW ++I AY  
Sbjct: 713 GKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSK 772

Query: 488 HGQASEALRLFDEMKKSNVRADSVTFLAVLSACSHAGLVDEGYIYFNEMITQYDIRPGIE 547
           HG  SEAL  FD+M  SNVR + VT + VLSACSH GLVD+G  YF  M ++Y + P  E
Sbjct: 773 HGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPE 832

Query: 548 HYSCLIDLLGRAGRLHEAYEILERSEETRNDTGLLSTLFSACRLHNDFGLGIQIGKLLME 607
           HY C++D+L RAG L  A E ++     + D  +  TL SAC +H +  +G      L+E
Sbjct: 833 HYVCVVDMLTRAGLLSRAKEFIQEM-PIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLE 892

Query: 608 VHPDDPSTYILLSNMYASVNKWEEVRNVRRKMKELGLKKRPGCSWIEINQRIQPFFVEDK 667
           + P+D +TY+LLSN+YA   KW+     R+KMKE G+KK PG SWIE+   I  F+V D+
Sbjct: 893 LEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQ 952

Query: 668 SNPVVDGVYECLSTL 683
           ++P+ D ++E    L
Sbjct: 953 NHPLADEIHEYFQDL 964

[Close]

BLAST of CmoCh20G001090.1 vs. NCBI nr
Match: gi|449445041|ref|XP_004140282.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g27110 [Cucumis sativus])

HSP 1 Score: 1268.4 bits (3281), Expect = 0.0e+00
Identity = 610/693 (88.02%), Postives = 654/693 (94.37%), Query Frame = 1


Query: 1   MDYMTLLSALRTCASSKLLKQGKLIHQRIFCSGFQSNVTLCKALIGFYFSCYDYRSAELV 60
           MDY+TLLSALRTC SSKLLKQGKLIHQRIF  GFQSN+ L K+LIGFYFSC+DY SAELV
Sbjct: 1   MDYVTLLSALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELV 60

Query: 61  FQTNDCPLDVSLWNALLSAYTKSSRFVEALQLFDQLKSHSHVRPDCYTYPVVLKACGGLG 120
           FQTNDCPLDVSLWNALLSAYT + RFVEALQLFDQL  +S+VRPD YTYPVVLKACGGLG
Sbjct: 61  FQTNDCPLDVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLG 120

Query: 121 RVVYGRRIHNHLIKTGLIWDVFVGSSMMNMYAKCDQFHDAVDLFDEIPQRDVGCWNAVIS 180
           RV+YGRRIHNHL+KTGLIWDVFVGSS+MNMYAKCDQF DA+ LFDE PQRDVGCWNAVIS
Sbjct: 121 RVIYGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVIS 180

Query: 181 CYFQDDKPEAALKMFDKMKELGFEPNSVTFTVVVSSCARLLNLERGKEIHRELIDRSVLL 240
           CYF+D K E ALK FDKMKELGFEPNSVTFTVVVSSC RLLNLERGKE+HRELI+R +LL
Sbjct: 181 CYFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRILL 240

Query: 241 DAFVLSALVDMYGKCGCLEMAKEVFEQIPRKNAMTWNSMITGYSLKGDSRSCIELLMRMN 300
           DAFVLSALVDMYGKCGCLEMAKEVFE+IPRKNA+TWN+MITGYSLKGDSRSCIELLMRMN
Sbjct: 241 DAFVLSALVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYSLKGDSRSCIELLMRMN 300

Query: 301 YEGTEPTLTTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDLYFKCGSVS 360
            EGT+PTL TLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLID YFKCG VS
Sbjct: 301 DEGTKPTLMTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVS 360

Query: 361 SAETVFRNVSKNDVVSWNVMISGYVMVGNHIQALRVYDNMKEHHVKPDAVTFSSTLSACS 420
           SAET+FR +SKN+VVSWNVMISG+VMVGNHIQAL +YDNMKEHHVKPDA+TFSSTLSACS
Sbjct: 361 SAETIFRTISKNEVVSWNVMISGHVMVGNHIQALHIYDNMKEHHVKPDALTFSSTLSACS 420

Query: 421 QLAALDKGRELHHCIISHKLESNEIVMGALLDMYAKCGDVNEARKLFHQLPERDLVSWTS 480
           QLAALDKGRELH+CII+HKLE+NEIVMGALLDMYAKCGDV+EARKLFHQLP+RDLVSWTS
Sbjct: 421 QLAALDKGRELHYCIINHKLEANEIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTS 480

Query: 481 MITAYGSHGQASEALRLFDEMKKSNVRADSVTFLAVLSACSHAGLVDEGYIYFNEMITQY 540
           MI AYGSHGQASEALRLFDEM+K NVRADSVTFLAVLSACSHAGLVDEGY+YFNEM+ QY
Sbjct: 481 MIFAYGSHGQASEALRLFDEMQKLNVRADSVTFLAVLSACSHAGLVDEGYMYFNEMVVQY 540

Query: 541 DIRPGIEHYSCLIDLLGRAGRLHEAYEILERSEETRNDTGLLSTLFSACRLHNDFGLGIQ 600
           DI+PGIEHYSCLIDLLGRAGRLHEAYEIL+RS+ETR+D GLLSTLFSAC LHN+F LGIQ
Sbjct: 541 DIKPGIEHYSCLIDLLGRAGRLHEAYEILQRSKETRSDIGLLSTLFSACLLHNNFVLGIQ 600

Query: 601 IGKLLMEVHPDDPSTYILLSNMYASVNKWEEVRNVRRKMKELGLKKRPGCSWIEINQRIQ 660
           IGK+L+EV PDDPSTYILLSNMYASVNKW+EVR VRRKMKELGLKK PGCSWIEINQRI 
Sbjct: 601 IGKMLIEVDPDDPSTYILLSNMYASVNKWDEVRKVRRKMKELGLKKSPGCSWIEINQRIH 660

Query: 661 PFFVEDKSNPVVDGVYECLSTLGCHMEKNELEV 694
           PFF EDKSNP+ DGVYECL+ LGCHMEKNELE+
Sbjct: 661 PFFAEDKSNPLADGVYECLNILGCHMEKNELEL 693

[Close]

BLAST of CmoCh20G001090.1 vs. NCBI nr
Match: gi|225436612|ref|XP_002275537.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g27110 [Vitis vinifera])

HSP 1 Score: 956.4 bits (2471), Expect = 2.6e-275
Identity = 452/691 (65.41%), Postives = 559/691 (80.90%), Query Frame = 1


Query: 1   MDYMTLLSALRTCASSKLLKQGKLIHQRIFCSGFQSNVTLCKALIGFYFSCYDYRSAELV 60
           MD   LLS L+TC  SK LKQGKLIHQ+I   G Q+N+TLCK+LI  YFSC+ ++SA+LV
Sbjct: 1   MDTTKLLSLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLV 60

Query: 61  FQTNDCPLDVSLWNALLSAYTKSSRFVEALQLFDQLKSHSHVRPDCYTYPVVLKACGGLG 120
           FQT + PLD++LWN L++A TK+  F+E L++F +L    +++PD +TYP VLKAC GLG
Sbjct: 61  FQTIENPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLG 120

Query: 121 RVVYGRRIHNHLIKTGLIWDVFVGSSMMNMYAKCDQFHDAVDLFDEIPQRDVGCWNAVIS 180
           RV YG+ +H H+IK+G   DV V SS + MYAKC+ F DA+ LFDE+P+RDV  WN VIS
Sbjct: 121 RVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVIS 180

Query: 181 CYFQDDKPEAALKMFDKMKELGFEPNSVTFTVVVSSCARLLNLERGKEIHRELIDRSVLL 240
           CY+QD +PE AL++F++MK  GF+P+SVT T V+SSCARLL+LERGKEIH EL+     L
Sbjct: 181 CYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFAL 240

Query: 241 DAFVLSALVDMYGKCGCLEMAKEVFEQIPRKNAMTWNSMITGYSLKGDSRSCIELLMRMN 300
           D FV SALVDMYGKCGCLEMAKEVFEQI RKN ++WNSMI GYSLKGDS+SCIEL  RM+
Sbjct: 241 DGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMD 300

Query: 301 YEGTEPTLTTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDLYFKCGSVS 360
            EG  PTLTTL+SI+ A SRSV L+ GKFIHGYI+RNR++ DIF++ SLIDLYFKCG++ 
Sbjct: 301 EEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIG 360

Query: 361 SAETVFRNVSKNDVVSWNVMISGYVMVGNHIQALRVYDNMKEHHVKPDAVTFSSTLSACS 420
           SAE VF+N+ K +VVSWNVMISGYV VG++++AL ++ +M++  VKPDA+TF+S L ACS
Sbjct: 361 SAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACS 420

Query: 421 QLAALDKGRELHHCIISHKLESNEIVMGALLDMYAKCGDVNEARKLFHQLPERDLVSWTS 480
           QLA L+KG+E+H+ II  KLE NE+VMGALLDMYAKCG V+EA  +F+QLPERD VSWTS
Sbjct: 421 QLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTS 480

Query: 481 MITAYGSHGQASEALRLFDEMKKSNVRADSVTFLAVLSACSHAGLVDEGYIYFNEMITQY 540
           MI AYGSHGQA EAL+LF++M++S+ + D VTFLA+LSACSHAGLVDEG  YFN+MI +Y
Sbjct: 481 MIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEY 540

Query: 541 DIRPGIEHYSCLIDLLGRAGRLHEAYEILERSEETRNDTGLLSTLFSACRLHNDFGLGIQ 600
             +P +EHYSCLIDLLGR GRL EAYEIL+R+ + R D GLLSTLFSAC LH    LG Q
Sbjct: 541 GFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQ 600

Query: 601 IGKLLMEVHPDDPSTYILLSNMYASVNKWEEVRNVRRKMKELGLKKRPGCSWIEINQRIQ 660
           IG+LL+E  PDDPSTYI+LSNMYASV KW+EVR VR K+KELGLKK PGCSWIE+ +RI 
Sbjct: 601 IGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKNPGCSWIEVGKRIH 660

Query: 661 PFFVEDKSNPVVDGVYECLSTLGCHMEKNEL 692
           PF VEDKS+P  D +YEC+S L  H+EK ++
Sbjct: 661 PFVVEDKSHPQADMIYECMSILASHVEKYQV 691

[Close]

BLAST of CmoCh20G001090.1 vs. NCBI nr
Match: gi|1009114429|ref|XP_015873684.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g27110 [Ziziphus jujuba])

HSP 1 Score: 947.2 bits (2447), Expect = 1.6e-272
Identity = 452/691 (65.41%), Postives = 557/691 (80.61%), Query Frame = 1


Query: 1   MDYMTLLSALRTCASSKLLKQGKLIHQRIFCSGFQSNVTLCKALIGFYFSCYDYRSAELV 60
           MD   L+  L+ C SSK + QGKLIHQ+I   G Q+N TLCK LI FYFSC  Y    LV
Sbjct: 1   MDTGKLILLLKACISSKTVLQGKLIHQKIVSLGLQNNTTLCKNLINFYFSCRLYDYGSLV 60

Query: 61  FQTNDCPLDVSLWNALLSAYTKSSRFVEALQLFDQLKSHSHVRPDCYTYPVVLKACGGLG 120
           F +   P D+SLWN LL+AYTK+  F+EALQLF++L  +  + PD +TYP VLKACGGLG
Sbjct: 61  FDSVKNPFDISLWNCLLAAYTKNFMFIEALQLFERLLHYPFLVPDSFTYPGVLKACGGLG 120

Query: 121 RVVYGRRIHNHLIKTGLIWDVFVGSSMMNMYAKCDQFHDAVDLFDEIPQRDVGCWNAVIS 180
           RV YGR IH HLIKT  + DV V SS++ MYAKC+ F  A+ LFDEIP+RDV CWN VIS
Sbjct: 121 RVNYGRMIHAHLIKTSFLSDVVVASSLVGMYAKCNVFECAIRLFDEIPERDVACWNTVIS 180

Query: 181 CYFQDDKPEAALKMFDKMKELGFEPNSVTFTVVVSSCARLLNLERGKEIHRELIDRSVLL 240
           CY+QD + E A+++F+KM+  GFEPNSVT TVV+SSCARLL+LE+GK+IH EL ++ ++ 
Sbjct: 181 CYYQDGQAEKAVELFEKMRSSGFEPNSVTLTVVISSCARLLDLEKGKKIHEELTEKGIVF 240

Query: 241 DAFVLSALVDMYGKCGCLEMAKEVFEQIPRKNAMTWNSMITGYSLKGDSRSCIELLMRMN 300
           D F+ S+LVDMYGKCGCLEMAKE+F++IP+KN + WNSMI  YSLKGDS+SCIELL RM 
Sbjct: 241 DGFIGSSLVDMYGKCGCLEMAKEIFQKIPKKNVIAWNSMIAAYSLKGDSKSCIELLRRMI 300

Query: 301 YEGTEPTLTTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDLYFKCGSVS 360
            EGT+PTLTTL+S++ ASSRSVQL+HGKFIHGYI+RN ++VDI+I  +LIDLYFKCGSV 
Sbjct: 301 DEGTKPTLTTLSSMLMASSRSVQLQHGKFIHGYIVRNSLEVDIYIISALIDLYFKCGSVL 360

Query: 361 SAETVFRNVSKNDVVSWNVMISGYVMVGNHIQALRVYDNMKEHHVKPDAVTFSSTLSACS 420
           +AE +F+ +   +VVSWNVMISGYV VGN+  AL +YDNMKE  V+PDA+TF+S L ACS
Sbjct: 361 AAENIFKKMPHINVVSWNVMISGYVTVGNYFGALGIYDNMKEGGVRPDAITFTSILPACS 420

Query: 421 QLAALDKGRELHHCIISHKLESNEIVMGALLDMYAKCGDVNEARKLFHQLPERDLVSWTS 480
           QLAAL+KG+E+H  II  +LESNE+VMGALLDMYAKCG V+EA  +F++LP RD+VSWTS
Sbjct: 421 QLAALEKGKEIHKNIIESELESNELVMGALLDMYAKCGAVDEALDIFNRLPGRDIVSWTS 480

Query: 481 MITAYGSHGQASEALRLFDEMKKSNVRADSVTFLAVLSACSHAGLVDEGYIYFNEMITQY 540
           MI AYGSHGQA EAL+LF  M++S  + D VTFLAVLSACSHAGLVDEG  +F++M+T+Y
Sbjct: 481 MIAAYGSHGQALEALKLFHGMQQSQAKPDGVTFLAVLSACSHAGLVDEGCYFFDQMMTEY 540

Query: 541 DIRPGIEHYSCLIDLLGRAGRLHEAYEILERSEETRNDTGLLSTLFSACRLHNDFGLGIQ 600
            I+P IEHYSC++DLLGRAGRL EAYEIL R+ E R+D GL STLFSAC+LH DF LG++
Sbjct: 541 GIKPSIEHYSCMLDLLGRAGRLGEAYEILHRTTEIRDDVGLWSTLFSACQLHRDFDLGVK 600

Query: 601 IGKLLMEVHPDDPSTYILLSNMYASVNKWEEVRNVRRKMKELGLKKRPGCSWIEINQRIQ 660
           I + L++  PDDPSTYI LSN+YASV  W+E+R VR KMKELGL+K PGCSWIE ++RIQ
Sbjct: 601 IARFLIDKDPDDPSTYITLSNIYASVKNWDEMRKVRSKMKELGLRKNPGCSWIETDKRIQ 660

Query: 661 PFFVEDKSNPVVDGVYECLSTLGCHMEKNEL 692
           PFFVED S+P ++ VYECL+ L  HMEK+EL
Sbjct: 661 PFFVEDTSHPQMEMVYECLTILNSHMEKDEL 691

[Close]

BLAST of CmoCh20G001090.1 vs. NCBI nr
Match: gi|147854092|emb|CAN83391.1| (hypothetical protein VITISV_041405 [Vitis vinifera])

HSP 1 Score: 934.9 bits (2415), Expect = 8.2e-269
Identity = 439/670 (65.52%), Postives = 545/670 (81.34%), Query Frame = 1


Query: 22  GKLIHQRIFCSGFQSNVTLCKALIGFYFSCYDYRSAELVFQTNDCPLDVSLWNALLSAYT 81
           GKLIHQ+I   G Q+N+TLCK+LI  YFSC+ ++SA+LVFQT + PLD++LWN L++A T
Sbjct: 214 GKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPLDITLWNGLMAACT 273

Query: 82  KSSRFVEALQLFDQLKSHSHVRPDCYTYPVVLKACGGLGRVVYGRRIHNHLIKTGLIWDV 141
           K+  F+E L++F +L    +++PD +TYP VLKAC GLGRV YG+ +H H+IK+G   DV
Sbjct: 274 KNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDV 333

Query: 142 FVGSSMMNMYAKCDQFHDAVDLFDEIPQRDVGCWNAVISCYFQDDKPEAALKMFDKMKEL 201
            V SS + MYAKC+ F DA+ LFDE+P+RDV  WN VISCY+QD +PE AL++F++MK  
Sbjct: 334 VVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVS 393

Query: 202 GFEPNSVTFTVVVSSCARLLNLERGKEIHRELIDRSVLLDAFVLSALVDMYGKCGCLEMA 261
           GF+P+SVT T V+SSCARLL+LERGKEIH EL+     LD FV SALVDMYGKCGCLEMA
Sbjct: 394 GFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMA 453

Query: 262 KEVFEQIPRKNAMTWNSMITGYSLKGDSRSCIELLMRMNYEGTEPTLTTLTSIIYASSRS 321
           KEVFEQI RKN ++WNSMI GYSLKGDS+SCIEL  RM+ EG  PTLTTL+SI+ A SRS
Sbjct: 454 KEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRS 513

Query: 322 VQLRHGKFIHGYILRNRIDVDIFIDVSLIDLYFKCGSVSSAETVFRNVSKNDVVSWNVMI 381
           V L+ GKFIHGYI+RNR++ DIF++ SLIDLYFKCG++ SAE VF+N+ K +VVSWNVMI
Sbjct: 514 VNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMI 573

Query: 382 SGYVMVGNHIQALRVYDNMKEHHVKPDAVTFSSTLSACSQLAALDKGRELHHCIISHKLE 441
           SGYV VG++++AL ++ +M++  VKPDA+TF+S L ACSQLA L+KG+E+H+ II  KLE
Sbjct: 574 SGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLE 633

Query: 442 SNEIVMGALLDMYAKCGDVNEARKLFHQLPERDLVSWTSMITAYGSHGQASEALRLFDEM 501
            NE+VMGALLDMYAKCG V+EA  +F+QLPERD VSWTSMI AYGSHGQA EAL+LF++M
Sbjct: 634 INEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKM 693

Query: 502 KKSNVRADSVTFLAVLSACSHAGLVDEGYIYFNEMITQYDIRPGIEHYSCLIDLLGRAGR 561
           ++S+ + D VTFLA+LSACSHAGLVDEG  YFN+MI +Y  +P +EHYSCLIDLLGR GR
Sbjct: 694 QQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGR 753

Query: 562 LHEAYEILERSEETRNDTGLLSTLFSACRLHNDFGLGIQIGKLLMEVHPDDPSTYILLSN 621
           L EAYEIL+R+ + R D GLLSTLFSAC LH    LG QIG+LL+E  PDDPSTYI+LSN
Sbjct: 754 LREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSN 813

Query: 622 MYASVNKWEEVRNVRRKMKELGLKKRPGCSWIEINQRIQPFFVEDKSNPVVDGVYECLST 681
           MYASV KW+EVR VR K+KELGLKK PGCSWIE+ +RI PF VEDKS+P  D +YEC+S 
Sbjct: 814 MYASVKKWDEVRKVRLKIKELGLKKNPGCSWIEVGKRIHPFVVEDKSHPQADMIYECMSI 873

Query: 682 LGCHMEKNEL 692
           L  H+EK ++
Sbjct: 874 LASHVEKYQV 883

[Close]

BLAST of CmoCh20G001090.1 vs. NCBI nr
Match: gi|568833069|ref|XP_006470740.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g27110 [Citrus sinensis])

HSP 1 Score: 933.7 bits (2412), Expect = 1.8e-268
Identity = 444/691 (64.25%), Postives = 548/691 (79.31%), Query Frame = 1


Query: 1   MDYMTLLSALRTCASSKLLKQGKLIHQRIFCSGFQSNVTLCKALIGFYFSCYDYRSAELV 60
           M+   +L+ LRTC  SK LK+GK+IHQ++   G Q+N+ LCK+LI  YFSC +Y  A LV
Sbjct: 1   MNTTRILTLLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLV 60

Query: 61  FQTNDCPLDVSLWNALLSAYTKSSRFVEALQLFDQLKSHSHVRPDCYTYPVVLKACGGLG 120
           F+T D PLD+SLWN L+++YTK+  ++ AL+LFD L  + +++PD YTYP VLKACGGLG
Sbjct: 61  FKTIDNPLDLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLG 120

Query: 121 RVVYGRRIHNHLIKTGLIWDVFVGSSMMNMYAKCDQFHDAVDLFDEIPQRDVGCWNAVIS 180
            V  G+ IH HLIKTG + DV + SS   MYAKC+ F  AV +FDE+ +RDV  WN VIS
Sbjct: 121 SVAIGKMIHTHLIKTGFLLDVVIASSTARMYAKCNSFECAVKMFDEMSERDVASWNTVIS 180

Query: 181 CYFQDDKPEAALKMFDKMKELGFEPNSVTFTVVVSSCARLLNLERGKEIHRELIDRSVLL 240
           CY+QD + E AL++F KM++ G +PNSVT T V+SSCARL++LERGKEIH+E I    + 
Sbjct: 181 CYYQDGQAEKALELFKKMRDSGVQPNSVTLTTVISSCARLMDLERGKEIHKEFIKDGFVS 240

Query: 241 DAFVLSALVDMYGKCGCLEMAKEVFEQIPRKNAMTWNSMITGYSLKGDSRSCIELLMRMN 300
           D+++ SALVDMYGKCGCLEMA+EVFEQ   K+ + WN++I GYS +GDS+SC+EL  RMN
Sbjct: 241 DSYISSALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVELFWRMN 300

Query: 301 YEGTEPTLTTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDLYFKCGSVS 360
            EG +PTLTT++S++ + SRS QL+HGK +HGYI+RN+I  D+FI+ SLIDLYFKCG VS
Sbjct: 301 EEGIKPTLTTISSVLMSCSRSGQLKHGKVVHGYIIRNKIQGDVFINSSLIDLYFKCGRVS 360

Query: 361 SAETVFRNVSKNDVVSWNVMISGYVMVGNHIQALRVYDNMKEHHVKPDAVTFSSTLSACS 420
           SAE VF  +SK DVV WNVMISGYV VG++ +AL +Y +MKE   KPDAVTF+S L ACS
Sbjct: 361 SAENVFEKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACS 420

Query: 421 QLAALDKGRELHHCIISHKLESNEIVMGALLDMYAKCGDVNEARKLFHQLPERDLVSWTS 480
           QLAAL+KG+E+H+ II  KLE+NEIVMGALLDMYAKCG V+EA K+F++LPERDLVSWTS
Sbjct: 421 QLAALEKGKEIHNHIIESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSWTS 480

Query: 481 MITAYGSHGQASEALRLFDEMKKSNVRADSVTFLAVLSACSHAGLVDEGYIYFNEMITQY 540
           MI AYGSHG+A EAL+LF EM++SN R DS+TFLA+LSACSHAG VDEG  YFN+MI++Y
Sbjct: 481 MIAAYGSHGRALEALKLFGEMQQSNARPDSITFLALLSACSHAGWVDEGGYYFNQMISEY 540

Query: 541 DIRPGIEHYSCLIDLLGRAGRLHEAYEILERSEETRNDTGLLSTLFSACRLHNDFGLGIQ 600
           +I+P  EHYSCLIDLLGRAGRL EAY IL+ + E R D GLLSTLFSACRLH D  +G +
Sbjct: 541 NIKPRNEHYSCLIDLLGRAGRLQEAYGILQSTPEIREDAGLLSTLFSACRLHRDIEMGEK 600

Query: 601 IGKLLMEVHPDDPSTYILLSNMYASVNKWEEVRNVRRKMKELGLKKRPGCSWIEINQRIQ 660
           I KLL+E  PDD STYI+LSNMYASV KW+EVR +R KMKELGL+K PGCSWIEI  RIQ
Sbjct: 601 IAKLLIEKDPDDSSTYIVLSNMYASVKKWDEVRKIRLKMKELGLRKNPGCSWIEIGDRIQ 660

Query: 661 PFFVEDKSNPVVDGVYECLSTLGCHMEKNEL 692
           PFF EDK  P  D VYECL+ L  HMEK+EL
Sbjct: 661 PFFAEDKLYPQADMVYECLAILAGHMEKDEL 691

The following BLAST results are available for this feature:

BLAST of CmoCh20G001090.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PP398_ARATH	3.0e-226	54.41	Pentatricopeptide repeat-containing protein At5g27110 OS=Arabidopsis thaliana GN...	[more]
PP320_ARATH	1.7e-128	35.61	Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t...	[more]
PP210_ARATH	4.0e-122	33.87	Pentatricopeptide repeat-containing protein At3g03580 OS=Arabidopsis thaliana GN...	[more]
PPR32_ARATH	2.6e-121	33.73	Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop...	[more]
PP307_ARATH	3.5e-118	33.33	Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana GN...	[more]

BLAST of CmoCh20G001090.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KK21_CUCSA	0.0e+00	88.02	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G432790 PE=4 SV=1	[more]
F6HA18_VITVI	1.8e-275	65.41	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0009g03560 PE=4 SV=...	[more]
A5BMC7_VITVI	5.7e-269	65.52	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_041405 PE=4 SV=1	[more]
A0A067DTR2_CITSI	5.4e-267	64.11	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g005487mg PE=4 SV=1	[more]
A0A0D2QXE3_GOSRA	1.1e-262	64.54	Uncharacterized protein OS=Gossypium raimondii GN=B456_004G014500 PE=4 SV=1	[more]

BLAST of CmoCh20G001090.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G27110.1	1.7e-227	54.41	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G18750.1	9.4e-130	35.61	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G03580.1	2.2e-123	33.87	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G11290.1	1.5e-122	33.73	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G13650.1	2.0e-119	33.33	Pentatricopeptide repeat (PPR) superfamily protein	[more]

BLAST of CmoCh20G001090.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449445041\|ref\|XP_004140282.1\|	0.0e+00	88.02	PREDICTED: pentatricopeptide repeat-containing protein At5g27110 [Cucumis sativu...	[more]
gi\|225436612\|ref\|XP_002275537.1\|	2.6e-275	65.41	PREDICTED: pentatricopeptide repeat-containing protein At5g27110 [Vitis vinifera...	[more]
gi\|1009114429\|ref\|XP_015873684.1\|	1.6e-272	65.41	PREDICTED: pentatricopeptide repeat-containing protein At5g27110 [Ziziphus jujub...	[more]
gi\|147854092\|emb\|CAN83391.1\|	8.2e-269	65.52	hypothetical protein VITISV_041405 [Vitis vinifera]	[more]
gi\|568833069\|ref\|XP_006470740.1\|	1.8e-268	64.25	PREDICTED: pentatricopeptide repeat-containing protein At5g27110 [Citrus sinensi...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR002885	Pentatricopeptide_repeat
IPR011990	TPR-like_helical_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh20G001090	CmoCh20G001090	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh20G001090.1	CmoCh20G001090.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh20G001090.1.CDS.1	CmoCh20G001090.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh20G001090.1.exon.1	CmoCh20G001090.1.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 548..571 score: 0.0064coord: 275..303 score: 1.0E-4coord: 246..271 score: 0.0025coord: 615..644 score:
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 171..219 score: 9.5E-15coord: 373..419 score: 2.9E-13coord: 69..116 score: 2.0E-9coord: 474..521 score: 3.1
IPR002885	Pentatricopeptide repeat	TIGRFAMs	TIGR00756	TIGR00756	coord: 449..475 score: 0.0011coord: 72..106 score: 5.2E-6coord: 375..409 score: 1.4E-7coord: 476..509 score: 6.3E-8coord: 174..207 score: 2.
IPR002885	Pentatricopeptide repeat	PROFILE	PS51375	PPR	coord: 342..372 score: 6.204coord: 474..508 score: 12.529coord: 443..473 score: 8.901coord: 140..170 score: 8.144coord: 612..646 score: 9.328coord: 105..139 score: 7.015coord: 171..205 score: 12.233coord: 373..407 score: 11.992coord: 2..36 score: 5.218coord: 241..271 score: 8.506coord: 545..575 score: 7.739coord: 272..306 score: 10.282coord: 206..240 score: 8.243coord: 408..442 score: 7.311coord: 69..103 score: 10.413coord: 509..544 score: 8
IPR011990	Tetratricopeptide-like helical domain	GENE3D	G3DSA:1.25.40.10		coord: 334..461 score: 2.7E-11coord: 65..100 score: 2.7E-11coord: 169..268 score: 2.7E-11coord: 462..642 score: 1.
IPR011990	Tetratricopeptide-like helical domain	unknown	SSF48452	TPR-like	coord: 450..648 score: 8.86E-7coord: 149..198 score: 8.8
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 33..307 score: 0.0coord: 343..653 score:
None	No IPR available	PANTHER	PTHR24015:SF791	SUBFAMILY NOT NAMED	coord: 33..307 score: 0.0coord: 343..653 score: