CmoCh20G000190.1 (mRNA) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAAAAAAAGGAAACAATTAAATTTATCCACCACCTCCTCCTTGTTTATGATTCTCCTATTTATATGCCCTTCGCTGATTTTACCATTCTGACTTCCGCCTCGCCTGGATCTCTCCCTTCTTATTTTCCTTGGTTTCCCCCTTCCTCCCCGCATCGAATTCTATGGCTGACCAGCTTACCGACGATCAGATCTCCGAGTTCAAGGAGGCCTTCAGTTTGTTCGACAAGGACGGCGATGGTCTGCTTCTTTCAGATCCCTTCTCCATTTCGCCTCCTTCTTTATCTTTTAATGATGCATGACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCNCCCCCCCCCCCCCCCATTTTAGATCTATTTTTGTGCTCCTGGAATTCTTATATATCGCCGTTGCTATCTATCATACCTCTTTGGATATCGTAGCTTTTTTTTTTTTTTTTTTTTTGCCGTTGATTGTGTTTTGCGAGGATTATAATAATGTTTCGTTTTGTTCTTTCCATGTGTTTTTTTTTTTTATTTCGTGTTCCTGGGTTTTTTCCGATCCGTTTCTGTTTTCCTGCATTGTATATTACGATCAACCTCTTCTGCGGGTAGAAAGCTTGGAAATTATGGATGGCATGTCGATGTGAAATTTTTCGTTGGAAGATAGTTCTTTATAAGTTGTCTATTATAGTTTGGAATCTGGAGAATGATTCACTACGTTTTTGTATGGCATTCTAGTTGATATATTACTGCTGCCCCTCGTCAGCCAGTGGGAATAACCTGTGGATCATTTCGTTTCTGTACCTTTTGAGTTTTCAGACGGTTTACGGTATAAGGAGCGATACCGTAAACATTAATTGGTTTTACGTATTCCATCAAATTAAATCTTTCTTTCTTTCTAAAGTTTGCCTATGTATCACTCAATGCCAGCCTGAGTTGTTGAGCATGGGCTAAATTAGATATGTTTCGTTGGTCTGTAAGGTAACTGAACCTAATGCCTGGAACCGTTAACAATGAGCACAAAGAGGTGTTACCAACAATTGCAACTATAGGAACATTGAGCGGGACAGACGAGATTGGTCTTCTCCCACTAAGAAACGAAGAACACAAACTGTAGGAGACAACTACCGTAGACTTTTTTCTTCTTTTTTTGGGTACTCTACCCACCATCCACATGAAAATATTGACTTTGCTAGGACTATTCGACTTACTGACAAGATTTGATCCAAATCTGGTACATAGGACAATTAGAAATTGCTTTTGCCAGGTATTTGACTGAAATTTTGTTTGATGAATCATCTTCTAGATTCTTCAATTTTCTATTGAGACCAAAGACCCACTATTCAACTAGACATCTAAACTCTTAAATTGTATCCTCTAGCTGATTTCATCTTGGGTTCTCTAAGAACTAGAGTCCATGTTCGAAGCAAAAGATAAAACATATTTTCTGTTGTGTCACTGAGACCAACTGCAAAATTTCAAATGTAAAGATTGACTGCTCAATCAATTATCCTTCCAAAATAGTACACCCTCTCATTCACACTCCAACCCCTTTTTGCAGAAAATTTCTCTATACAATTCTACATTTTTTAGATATCCTACCAAGGACCCACTACTTTTTCCCCCTTGGTTCTTTATCATAACCTGCTTCATTGAATTCATTAAGCATTAAACTCAAGTCTAACACGTATTTGGACTAACATGAGCATAACTCAATTGAGTAAGACATATATTCAACTAAAAGGTAAGACGTACAAATTTGCATCGCCACATGTTGTTTAACTCAATAAAGGCTAGCATGTATTGGTTGTTAATGTATGTCAAGCTTTACGCTGATTACATGAGTTGCATTTTGTTTGTTTTATTTATGTTGCATAGGTCTATTGTATTCTTTTCTTGCAGCAGTTGATTTACTTGCTACGTGTATAATCATAATTTATGTTACTTGAAGTTTATGCTAACTACATATTTCAGCTACATGCATTGAACTTTATGTCATTCTCAGTTACTCCATGATCTTTGAAATTTCCATTTTGCAGCTCTGAAACACATTAATTTTTGTTTTAGTGTATGGTTATTGCTTCTGCTTAGGATAAATCAGATGGTGAGTCCGCCTTATGGTTCGTAATAATGATTATCTTTTTCAAATTTTTATAGGTTGCATCACCACCAAGGAACTGGGGACTGTAATGCGGTCACTGGGCCAGAACCCAACAGAAGCTGAGTTACAAGACATGATCAATGAAGTTGATGCTGATGGAAATGGAACCATCGATTTTCCTGAGTTTCTTAATCTGATGGCTAGAAAAATGAAGGATACCGATTCAGAGGAGGAGCTTAAAGAAGCTTTCCGTGTGTTTGATAAAGATCAGAATGGGTTCATTTCTGCAGCCGAGCTCCGGCATGTAATGACAAATCTCGGTGAGAAGTTGACAGACGAGGAAGTTGATGAAATGATTCGTGAGGCAGACGTGGATGGCGATGGGCAAATCAACTATGAGGAGTTTGTCAAAGTCATGATGGCCAAGTGAGAATCAATCAACTGAAACCTTAAACCTCCTTAATCTGCTTGAAAAGGAAGAGGGATATGGGCAGATAAGTTGATGATATGACATTTTGTTTTACTATCTATTTTTGGGTGTCTCTCGTTTCCATTATTTGCGGTACTGTCTCTCAGTATCCTGTTTTTTTTTTGCTGCAATGATTTCTGTAGTTTGGCATGGCTGTTCGTGTCGGTAGTTTCTTTAATTTTTAAAATTTCTTTCTACATATAATGCTATGAACCTAGAACAATTGGTTGATCGAATCAGAAGATTTTGGTTGTGGGAAAGTTATAGCTGTCTTTAGTTGTTCCCAAACTTCACATCCTTTTTTCTTCTTTTTGGTGATGAACTTGCCTTTGCCTGAGAATAATTTTGTTTCACTGATCCTTTATATGCTAAATTGAGTTCGGATGAGTAGGAGTGTAGTTGATTGATAGGTAAGGATGTGTAATAATATGTTCAAACTTTGGGCTTCCGGGAGAGAGGAATGTAAAAGTTAGAAGGTATTAGGACTTAGGAAGCCAGATGATTTAGTCCGAGGATGGGTTAATAAAGAAGAGTTAAGAGTACAGGAAGAAAGTAAATATGTGTGTGTGTGTGTGTCTGTGTGTGTGTGTGTCTGTGTGTGTGCGTGTTTGTGTGTTTAAGTAATAAAATAGAAGAGCCTTGTGTTGTGGGTAATATGTTTGCATTTGTGTGTTGTTTTGTTGTTATTGATATGGATAGACGGGCGGACGCGATGCTGCAAGGGAGCGGCAGCAGGAAGAAGAGGAAATCCATGATACTCTCCAACCATAAGAAAACACGTGGCCTCCTCAAGTGTCGCATCCACCCATGTTCTGTGCTTTAGTTACCAGCTTCTTCTAACTCAATTCACTTCATTCTTTTACTTTTCTTTTAATTATTAATACTAATCAATTACTGACTATTTTGCGTCTTCCACTCTTCTTTAAATATAT AAAAAAAAAAAAGGAAACAATTAAATTTATCCACCACCTCCTCCTTGTTTATGATTCTCCTATTTATATGCCCTTCGCTGATTTTACCATTCTGACTTCCGCCTCGCCTGGATCTCTCCCTTCTTATTTTCCTTGGTTTCCCCCTTCCTCCCCGCATCGAATTCTATGGCTGACCAGCTTACCGACGATCAGATCTCCGAGTTCAAGGAGGCCTTCAGTTTGTTCGACAAGGACGGCGATGGTTGCATCACCACCAAGGAACTGGGGACTGTAATGCGGTCACTGGGCCAGAACCCAACAGAAGCTGAGTTACAAGACATGATCAATGAAGTTGATGCTGATGGAAATGGAACCATCGATTTTCCTGAGTTTCTTAATCTGATGGCTAGAAAAATGAAGGATACCGATTCAGAGGAGGAGCTTAAAGAAGCTTTCCGTGTGTTTGATAAAGATCAGAATGGGTTCATTTCTGCAGCCGAGCTCCGGCATGTAATGACAAATCTCGGTGAGAAGTTGACAGACGAGGAAGTTGATGAAATGATTCGTGAGGCAGACGTGGATGGCGATGGGCAAATCAACTATGAGGAGTTTGTCAAAGTCATGATGGCCAAGTGAGAATCAATCAACTGAAACCTTAAACCTCCTTAATCTGCTTGAAAAGGAAGAGGGATATGGGCAGATAAGTTGATGATATGACATTTTGTTTTACTATCTATTTTTGGGTGTCTCTCGTTTCCATTATTTGCGGTACTGTCTCTCAGTATCCTGTTTTTTTTTTGCTGCAATGATTTCTGTAGTTTGGCATGGCTGTTCGTGTCGGTAGTTTCTTTAATTTTTAAAATTTCTTTCTACATATAATGCTATGAACCTAGAACAATTGGTTGATCGAATCAGAAGATTTTGGTTGTGGGAAAGTTATAGCTGTCTTTAGTTGTTCCCAAACTTCACATCCTTTTTTCTTCTTTTTGGTGATGAACTTGCCTTTGCCTGAGAATAATTTTGTTTCACTGATCCTTTATATGCTAAATTGAGTTCGGATGAGTAGGAGTGTAGTTGATTGATAGGTAAGGATGTGTAATAATATGTTCAAACTTTGGGCTTCCGGGAGAGAGGAATGTAAAAGTTAGAAGGTATTAGGACTTAGGAAGCCAGATGATTTAGTCCGAGGATGGGTTAATAAAGAAGAGTTAAGAGTACAGGAAGAAAGTAAATATGTGTGTGTGTGTGTGTCTGTGTGTGTGTGTGTCTGTGTGTGTGCGTGTTTGTGTGTTTAAGTAATAAAATAGAAGAGCCTTGTGTTGTGGGTAATATGTTTGCATTTGTGTGTTGTTTTGTTGTTATTGATATGGATAGACGGGCGGACGCGATGCTGCAAGGGAGCGGCAGCAGGAAGAAGAGGAAATCCATGATACTCTCCAACCATAAGAAAACACGTGGCCTCCTCAAGTGTCGCATCCACCCATGTTCTGTGCTTTAGTTACCAGCTTCTTCTAACTCAATTCACTTCATTCTTTTACTTTTCTTTTAATTATTAATACTAATCAATTACTGACTATTTTGCGTCTTCCACTCTTCTTTAAATATAT ATGGCTGACCAGCTTACCGACGATCAGATCTCCGAGTTCAAGGAGGCCTTCAGTTTGTTCGACAAGGACGGCGATGGTTGCATCACCACCAAGGAACTGGGGACTGTAATGCGGTCACTGGGCCAGAACCCAACAGAAGCTGAGTTACAAGACATGATCAATGAAGTTGATGCTGATGGAAATGGAACCATCGATTTTCCTGAGTTTCTTAATCTGATGGCTAGAAAAATGAAGGATACCGATTCAGAGGAGGAGCTTAAAGAAGCTTTCCGTGTGTTTGATAAAGATCAGAATGGGTTCATTTCTGCAGCCGAGCTCCGGCATGTAATGACAAATCTCGGTGAGAAGTTGACAGACGAGGAAGTTGATGAAATGATTCGTGAGGCAGACGTGGATGGCGATGGGCAAATCAACTATGAGGAGTTTGTCAAAGTCATGATGGCCAAGTGA
BLAST of CmoCh20G000190.1 vs. Swiss-Prot
Match: CALM_EUPCH (Calmodulin OS=Euphorbia characias PE=2 SV=4) HSP 1 Score: 294.7 bits (753), Expect = 5.8e-79 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1
BLAST of CmoCh20G000190.1 vs. Swiss-Prot
Match: CALM_BRYDI (Calmodulin OS=Bryonia dioica PE=2 SV=2) HSP 1 Score: 294.7 bits (753), Expect = 5.8e-79 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1
BLAST of CmoCh20G000190.1 vs. Swiss-Prot
Match: CALM1_PETHY (Calmodulin-1 OS=Petunia hybrida GN=CAM81 PE=1 SV=2) HSP 1 Score: 294.7 bits (753), Expect = 5.8e-79 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1
BLAST of CmoCh20G000190.1 vs. Swiss-Prot
Match: CALM7_ARATH (Calmodulin-7 OS=Arabidopsis thaliana GN=CAM7 PE=1 SV=2) HSP 1 Score: 294.7 bits (753), Expect = 5.8e-79 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1
BLAST of CmoCh20G000190.1 vs. Swiss-Prot
Match: CALM_LILLO (Calmodulin OS=Lilium longiflorum PE=2 SV=2) HSP 1 Score: 294.7 bits (753), Expect = 5.8e-79 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1
BLAST of CmoCh20G000190.1 vs. TrEMBL
Match: G3MHB1_9ACAR (Uncharacterized protein (Fragment) OS=Amblyomma maculatum PE=2 SV=1) HSP 1 Score: 294.7 bits (753), Expect = 6.5e-77 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1
BLAST of CmoCh20G000190.1 vs. TrEMBL
Match: A5HSG4_ARTAN (Putative calmodulin OS=Artemisia annua PE=2 SV=1) HSP 1 Score: 294.7 bits (753), Expect = 6.5e-77 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1
BLAST of CmoCh20G000190.1 vs. TrEMBL
Match: Q1H5F3_ARATH (At3g43810 OS=Arabidopsis thaliana GN=At3g43810 PE=2 SV=1) HSP 1 Score: 294.7 bits (753), Expect = 6.5e-77 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1
BLAST of CmoCh20G000190.1 vs. TrEMBL
Match: D2XQ33_IPOBA (Calmodulin OS=Ipomoea batatas PE=2 SV=1) HSP 1 Score: 294.7 bits (753), Expect = 6.5e-77 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1
BLAST of CmoCh20G000190.1 vs. TrEMBL
Match: D7LMD4_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_484819 PE=4 SV=1) HSP 1 Score: 294.7 bits (753), Expect = 6.5e-77 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1
BLAST of CmoCh20G000190.1 vs. TAIR10
Match: AT3G43810.1 (AT3G43810.1 calmodulin 7) HSP 1 Score: 294.7 bits (753), Expect = 3.3e-80 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1
BLAST of CmoCh20G000190.1 vs. TAIR10
Match: AT2G27030.3 (AT2G27030.3 calmodulin 5) HSP 1 Score: 293.5 bits (750), Expect = 7.3e-80 Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 1
BLAST of CmoCh20G000190.1 vs. TAIR10
Match: AT3G56800.1 (AT3G56800.1 calmodulin 3) HSP 1 Score: 293.5 bits (750), Expect = 7.3e-80 Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 1
BLAST of CmoCh20G000190.1 vs. TAIR10
Match: AT5G21274.1 (AT5G21274.1 calmodulin 6) HSP 1 Score: 293.1 bits (749), Expect = 9.6e-80 Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 1
BLAST of CmoCh20G000190.1 vs. TAIR10
Match: AT2G41110.2 (AT2G41110.2 calmodulin 2) HSP 1 Score: 284.6 bits (727), Expect = 3.4e-77 Identity = 148/161 (91.93%), Postives = 149/161 (92.55%), Query Frame = 1
BLAST of CmoCh20G000190.1 vs. NCBI nr
Match: gi|985436881|ref|XP_015383199.1| (PREDICTED: calmodulin-related protein-like [Citrus sinensis]) HSP 1 Score: 294.7 bits (753), Expect = 9.3e-77 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1
BLAST of CmoCh20G000190.1 vs. NCBI nr
Match: gi|643740349|gb|KDP45998.1| (hypothetical protein JCGZ_14905 [Jatropha curcas]) HSP 1 Score: 294.7 bits (753), Expect = 9.3e-77 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1
BLAST of CmoCh20G000190.1 vs. NCBI nr
Match: gi|595807593|ref|XP_007202636.1| (hypothetical protein PRUPE_ppa012070mg [Prunus persica]) HSP 1 Score: 294.7 bits (753), Expect = 9.3e-77 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1
BLAST of CmoCh20G000190.1 vs. NCBI nr
Match: gi|34304715|gb|AAQ63461.1| (calmodulin 4 [Daucus carota]) HSP 1 Score: 294.7 bits (753), Expect = 9.3e-77 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1
BLAST of CmoCh20G000190.1 vs. NCBI nr
Match: gi|923610460|ref|XP_013744017.1| (PREDICTED: calmodulin-7-like [Brassica napus]) HSP 1 Score: 294.7 bits (753), Expect = 9.3e-77 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
|