CmoCh18G012880.1 (mRNA) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh18G012880.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Calcium-dependent lipid-binding (CaLB domain) family protein
Location	Cmo_Chr18 : 12441121 .. 12441978 (-)
Sequence length	858

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTCTCGCTACGAAGTGGAAGTGAAAATCCTGTCCGCTAAAGATCTTAAGAACATCAATTGGCGTTACGGTGGCCTGAAACCCTACGCCGTCGTTTGGATTGATCCGAAGAGTAAATCGTCGACGAAGGTCGATGCTGAAGGCGACACGTCGCCGTACTGGGACGAAACGTTAGTCATTCCATTCTCATCGCCGATTGAAGACTCTACGCTTTACATCGACGTGGTCCACGTCGTCTCCGGTGACGAAGACACCAAGCCGCTGATCGGCTCCGCCAAGCTTCACCTCTCTGAGGTCGTCGACGATGTTGGCCTCGGTGAACGCTCTCAGCGGACTCTCCAATTGAAACGGCCATCCGGCAGGCCACAAGGGAAGATCGAAGTTAAAGTAACGGTTCGAGAACCACGTTACCGACCCTCCGATTCTTACTACGCGCCGCCGTATGGGGTCCCACCGCCAGGTACGAACAGGGATTTTTCTGCTCCGCCACCGCCGCAGCCCTATGCTGCTCCGTACTCTGCTCCTCATGATCCTTACTATTCGACGGCCCCGCCGTCCGGATACCCCTATGGCGGGTATAATGCACCGGCGCCGTATGGCCAATCGAATTACGGGCAGCCTTCGTACGGGCAGCCGAGTTACGGGCAGCCAGCGTATGGCGATCAGGTTTACGGGCATCCAGAGGAGAAGAAGAGCAAGTACGGGATGGGGACCGGATTGGCTATCGGTGCCGCGGCCGGAGTCTTAGGTGGATTGGCCTTGGGAGAAGGCGTGGAATACTTGGAGGACAAGATCGCCGAGGACGCGGCGGAGAGGGTGGAGGATGATCTTGGGTACGGCGACGATGATTTCTAG

mRNA sequence

ATGGCCTCTCGCTACGAAGTGGAAGTGAAAATCCTGTCCGCTAAAGATCTTAAGAACATCAATTGGCGTTACGGTGGCCTGAAACCCTACGCCGTCGTTTGGATTGATCCGAAGAGTAAATCGTCGACGAAGGTCGATGCTGAAGGCGACACGTCGCCGTACTGGGACGAAACGTTAGTCATTCCATTCTCATCGCCGATTGAAGACTCTACGCTTTACATCGACGTGGTCCACGTCGTCTCCGGTGACGAAGACACCAAGCCGCTGATCGGCTCCGCCAAGCTTCACCTCTCTGAGGTCGTCGACGATGTTGGCCTCGGTGAACGCTCTCAGCGGACTCTCCAATTGAAACGGCCATCCGGCAGGCCACAAGGGAAGATCGAAGTTAAAGTAACGGTTCGAGAACCACGTTACCGACCCTCCGATTCTTACTACGCGCCGCCGTATGGGGTCCCACCGCCAGGTACGAACAGGGATTTTTCTGCTCCGCCACCGCCGCAGCCCTATGCTGCTCCGTACTCTGCTCCTCATGATCCTTACTATTCGACGGCCCCGCCGTCCGGATACCCCTATGGCGGGTATAATGCACCGGCGCCGTATGGCCAATCGAATTACGGGCAGCCTTCGTACGGGCAGCCGAGTTACGGGCAGCCAGCGTATGGCGATCAGGTTTACGGGCATCCAGAGGAGAAGAAGAGCAAGTACGGGATGGGGACCGGATTGGCTATCGGTGCCGCGGCCGGAGTCTTAGGTGGATTGGCCTTGGGAGAAGGCGTGGAATACTTGGAGGACAAGATCGCCGAGGACGCGGCGGAGAGGGTGGAGGATGATCTTGGGTACGGCGACGATGATTTCTAG

Coding sequence (CDS)

ATGGCCTCTCGCTACGAAGTGGAAGTGAAAATCCTGTCCGCTAAAGATCTTAAGAACATCAATTGGCGTTACGGTGGCCTGAAACCCTACGCCGTCGTTTGGATTGATCCGAAGAGTAAATCGTCGACGAAGGTCGATGCTGAAGGCGACACGTCGCCGTACTGGGACGAAACGTTAGTCATTCCATTCTCATCGCCGATTGAAGACTCTACGCTTTACATCGACGTGGTCCACGTCGTCTCCGGTGACGAAGACACCAAGCCGCTGATCGGCTCCGCCAAGCTTCACCTCTCTGAGGTCGTCGACGATGTTGGCCTCGGTGAACGCTCTCAGCGGACTCTCCAATTGAAACGGCCATCCGGCAGGCCACAAGGGAAGATCGAAGTTAAAGTAACGGTTCGAGAACCACGTTACCGACCCTCCGATTCTTACTACGCGCCGCCGTATGGGGTCCCACCGCCAGGTACGAACAGGGATTTTTCTGCTCCGCCACCGCCGCAGCCCTATGCTGCTCCGTACTCTGCTCCTCATGATCCTTACTATTCGACGGCCCCGCCGTCCGGATACCCCTATGGCGGGTATAATGCACCGGCGCCGTATGGCCAATCGAATTACGGGCAGCCTTCGTACGGGCAGCCGAGTTACGGGCAGCCAGCGTATGGCGATCAGGTTTACGGGCATCCAGAGGAGAAGAAGAGCAAGTACGGGATGGGGACCGGATTGGCTATCGGTGCCGCGGCCGGAGTCTTAGGTGGATTGGCCTTGGGAGAAGGCGTGGAATACTTGGAGGACAAGATCGCCGAGGACGCGGCGGAGAGGGTGGAGGATGATCTTGGGTACGGCGACGATGATTTCTAG

Homology

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BLAST of CmoCh18G012880.1 vs. TrEMBL
Match: A0A0A0LBH6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G183350 PE=4 SV=1)

HSP 1 Score: 466.1 bits (1198), Expect = 3.1e-128
Identity = 239/293 (81.57%), Postives = 262/293 (89.42%), Query Frame = 1


Query: 1   MASRYEVEVKILSAKDLKNINWRYGGLKPYAVVWIDPKSKSSTKVDAEGDTSPYWDETLV 60
           MASRYE+E+KI SAKDLKNINW+YG LKPYAVVWIDPK KSSTKVD +GDTSP+WDETLV
Sbjct: 1   MASRYELELKIQSAKDLKNINWKYGTLKPYAVVWIDPKQKSSTKVDNQGDTSPFWDETLV 60

Query: 61  IPFSSPIEDSTLYIDVVHVVSGDEDTKPLIGSAKLHLSEVVDDVGLGERSQRTLQLKRPS 120
           IPF S IEDSTL+IDVVHVV  DEDTKPLIGSA+L L+E++DDVGLGE SQRTLQLKRPS
Sbjct: 61  IPFFSSIEDSTLHIDVVHVVGADEDTKPLIGSARLPLAELIDDVGLGESSQRTLQLKRPS 120

Query: 121 GRPQGKIEVKVTVREPRYRPSDSYYAPPYGVPPPGTNRDFSAPPPPQPYAAPYSAPHDPY 180
           GRPQGKIEVKVTVREPRYR SDSYY PPYGVPPPG+ RD+SAPPP  PY APYSAP +PY
Sbjct: 121 GRPQGKIEVKVTVREPRYRSSDSYYTPPYGVPPPGSARDYSAPPP--PYVAPYSAPPNPY 180

Query: 181 YSTAPPSGYPYGGYNAPA------PYGQSNYGQPSYGQPSYGQPAYGDQV-YGHPEE-KK 240
           YS APPSGYPYGGY APA      PYGQSNYGQPSYGQ SYGQPAYG+   YG PEE KK
Sbjct: 181 YSAAPPSGYPYGGYGAPAPPPTAPPYGQSNYGQPSYGQGSYGQPAYGEHTYYGQPEEKKK 240

Query: 241 SKYGMGTGLAIGAAAGVLGGLALGEGVEYLEDKIAEDAAERVEDDLGYGDDDF 286
           SK+GMGTGLA+GAAAG+LGGLA+GEGVEY+ED+IAEDAA++VEDDLGYGD+DF
Sbjct: 241 SKFGMGTGLAVGAAAGILGGLAIGEGVEYVEDQIAEDAAQKVEDDLGYGDEDF 291

[Close]

BLAST of CmoCh18G012880.1 vs. TrEMBL
Match: A0A068VMH9_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00005975001 PE=4 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 5.4e-96
Identity = 196/287 (68.29%), Postives = 231/287 (80.49%), Query Frame = 1


Query: 1   MASRYEVEVKILSAKDLKNINWRYGGLKPYAVVWIDPKSKSSTKVDAEGDTSPYWDETLV 60
           M SRYEVEV I SAKDLKN+NWR+G LKPYAVVW+DPK+K ST+VD EGDTSPYW+ETLV
Sbjct: 1   MGSRYEVEVAITSAKDLKNVNWRHGPLKPYAVVWVDPKAKCSTRVDDEGDTSPYWEETLV 60

Query: 61  IPFSSPIEDSTLYIDVVHVVSGDEDTKPLIGSAKLHLSEVVDDVGLGERSQRTLQLKRPS 120
           IPF SPIEDSTL IDVVH  +  EDTKPLIGSA+L L +VVD+ GLG R +R L+LKRPS
Sbjct: 61  IPFDSPIEDSTLLIDVVHAKAA-EDTKPLIGSARLRLIDVVDEAGLGRRVERKLELKRPS 120

Query: 121 GRPQGKIEVKVTVRE-PRYRPSDSYYAPPYGVPPPGTNRDFSAPPPPQPYA-APYSAPHD 180
           GRP GK++V+V+VRE PRYR  D YYAPPYGVP PG +RD++A   PQPY   PY AP  
Sbjct: 121 GRPHGKLQVQVSVREPPRYRAPDPYYAPPYGVPQPG-SRDYAA---PQPYGNPPYGAPPA 180

Query: 181 PYYSTAPPSGYPYGGYNAPAPYGQSNYGQPSYGQPSYGQPAYGDQVYGHPEEKKSKY-GM 240
             Y+ APP+GYP   Y+AP      +YGQPSYGQP+YGQP+YG  VYG  E+KKSK+ GM
Sbjct: 181 SAYA-APPAGYP---YSAPPAAPPPSYGQPSYGQPAYGQPSYGQPVYGE-EKKKSKFGGM 240

Query: 241 GTGLAIGAAAGVLGGLALGEGVEYLEDKIAEDAAERVEDDLGYGDDD 285
           GTGLA+GA AG LGGLAL EG++Y +DKIA+DAAE+VE+D+GY DDD
Sbjct: 241 GTGLAVGAVAGALGGLALFEGIDYAKDKIADDAAEKVEEDIGYDDDD 277

[Close]

BLAST of CmoCh18G012880.1 vs. TrEMBL
Match: A0A0V0HFV8_SOLCH (Putative ovule protein OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 2.8e-92
Identity = 188/294 (63.95%), Postives = 216/294 (73.47%), Query Frame = 1


Query: 1   MASRYEVEVKILSAKDLKNINWRYGGLKPYAVVWIDPKSKSSTKVDAEGDTSPYWDETLV 60
           M SRYEVEVKI SAKDLKNINWRYG LKPYAVVW+DP SK STKVD +GDTSPYW++ L+
Sbjct: 1   MGSRYEVEVKITSAKDLKNINWRYGPLKPYAVVWVDPNSKCSTKVDEDGDTSPYWNDKLL 60

Query: 61  IPFSSPIEDSTLYIDVVHVVSGDEDTKPLIGSAKLHLSEVVDDVGLGERSQRTLQLKRPS 120
           IP +SPI++S LYID+VH V  +EDTKPLIGSAK+ LSEVVD+ G+G   +RTLQLKRPS
Sbjct: 61  IPLNSPIDESVLYIDIVHAVGAEEDTKPLIGSAKISLSEVVDEAGVGGEVERTLQLKRPS 120

Query: 121 GRPQGKIEVKVTVREPRYRPSDSYYAPPYGVPPPGTNRDFSAPPPPQPYAAPYSAPHDPY 180
           GRPQGK+EV+VTVR+PRYR  D+YYAPPYGVPPP           P  Y   Y AP  PY
Sbjct: 121 GRPQGKVEVQVTVRDPRYRARDAYYAPPYGVPPPAQ---------PYNYGGXYGAPIPPY 180

Query: 181 YSTAPPSGYPYGGYNAPAPYGQSNYGQPSYGQP---SYGQPAYGDQVYGHPEEKK-SKYG 240
                       G  AP  YGQ  YG   YGQP   SYGQP  G   YG+ EEKK SK+G
Sbjct: 181 ------------GQPAPGSYGQPGYGMGGYGQPAVGSYGQPGGG---YGYEEEKKKSKFG 240

Query: 241 MGTGLAIGAAAGVLGGLALGEGVEYLEDKIAEDAAERVEDDLG-----YGDDDF 286
           MGTGLA+GA AGVLGG+A+ EG+++LED IAEDAAE+VE+DL      YGDDDF
Sbjct: 241 MGTGLAVGAVAGVLGGVAIAEGIDHLEDSIAEDAAEKVEEDLADDDGDYGDDDF 270

[Close]

BLAST of CmoCh18G012880.1 vs. TrEMBL
Match: M1CXL8_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400029920 PE=4 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 4.7e-92
Identity = 188/291 (64.60%), Postives = 217/291 (74.57%), Query Frame = 1


Query: 1   MASRYEVEVKILSAKDLKNINWRYGGLKPYAVVWIDPKSKSSTKVDAEGDTSPYWDETLV 60
           M SRYEVEVKI SAKDLKNINWRYG LKPYAVVW+DP SK STKVD +GDTSPYW + L+
Sbjct: 1   MGSRYEVEVKITSAKDLKNINWRYGPLKPYAVVWVDPNSKCSTKVDEDGDTSPYWTDKLL 60

Query: 61  IPFSSPIEDSTLYIDVVHVVSGDEDTKPLIGSAKLHLSEVVDDVGLGERSQRTLQLKRPS 120
           IP +SPI++S LYID+VH V  +EDTKPLIGSAK+ LSEVVD+ G+G   +RTLQLKRPS
Sbjct: 61  IPLNSPIDESVLYIDIVHAVGAEEDTKPLIGSAKISLSEVVDEAGVGGEVERTLQLKRPS 120

Query: 121 GRPQGKIEVKVTVREPRYRPSDSYYAPPYGVPPPGTNRDFSAPPPPQPYAAPYSAPHDPY 180
           GRPQGK+EV+VTVR+PRYR  D+YYAPPYGVPPP           P  Y   Y AP  PY
Sbjct: 121 GRPQGKVEVQVTVRDPRYRARDAYYAPPYGVPPPAQ---------PYNYGGAYGAPIPPY 180

Query: 181 YSTAPPSGYPYGGYNAPAPYGQSNYGQPSYGQPSYGQPAYGDQVYGHPEEKK-SKYGMGT 240
              AP      G Y  PA YG   YGQP+ G  SYGQP  G   YG+ EEKK SK+G+GT
Sbjct: 181 GQPAP------GSYGQPA-YGMGGYGQPAVG--SYGQPGGG---YGYEEEKKKSKFGLGT 240

Query: 241 GLAIGAAAGVLGGLALGEGVEYLEDKIAEDAAERVEDDLG-----YGDDDF 286
           GLA+GA AGVLGG+A+ EG+++LED IAEDAAE+VE+DL      YGDDDF
Sbjct: 241 GLAVGAVAGVLGGVAIAEGIDHLEDSIAEDAAEKVEEDLADDDGDYGDDDF 270

[Close]

BLAST of CmoCh18G012880.1 vs. TrEMBL
Match: W9R331_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_003038 PE=4 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 4.7e-92
Identity = 193/295 (65.42%), Postives = 221/295 (74.92%), Query Frame = 1


Query: 1   MASRYEVEVKILSAKDLKNINWRYGGLKPYAVVWIDPKSKSSTKVDAEGDTSPYWDETLV 60
           MASR EVEVK+ SAKDLKN+NWR+G ++PYAVVW+DP  K ST+VD  GDT+P WDETL 
Sbjct: 1   MASRDEVEVKLSSAKDLKNVNWRHGPVRPYAVVWVDPNIKCSTRVDESGDTNPNWDETLT 60

Query: 61  IPFSSPIEDS-TLYIDVVHVVSGDEDTKPLIGSAKLHLSEVVDDVGLGERSQRTLQLKRP 120
           IP  +PI+DS TLYID+VH  S + DTK LIGSA+L L EVVDDVG GER+ RTLQ+KRP
Sbjct: 61  IPLPTPIDDSTTLYIDIVHAGS-EPDTKRLIGSARLKLREVVDDVGYGERATRTLQMKRP 120

Query: 121 SGRPQGKIEVKVTVREPRYRPSDSYYAPPYGVPPPGTN----RDFSAPPPPQPY---AAP 180
           SGRPQGK+EVKV+VREP YRP D Y APPYGVPPP          S PPP  PY   +AP
Sbjct: 121 SGRPQGKVEVKVSVREPYYRPPDPYSAPPYGVPPPAYGGAPYASVSPPPPRDPYYAASAP 180

Query: 181 YSAPHDPYY-STAPPSGYPYGGYNAPAPYGQSNYGQPSYGQPSYGQPAYGDQVYGHPEEK 240
                DPYY + APPSGYPY  Y+AP         QP YGQP YGQ  YG+ VYG  EEK
Sbjct: 181 PPPSRDPYYAAAAPPSGYPYNPYSAPP--------QP-YGQPGYGQGGYGEPVYGRAEEK 240

Query: 241 KSKY-GMGTGLAIGAAAGVLGGLALGEGVEYLEDKIAEDAAERVEDDLGYGDDDF 286
           KSK+ GMGTGLA+GA AG LGGLAL EGV+++EDKIA+D AERVEDD+GY  DDF
Sbjct: 241 KSKFGGMGTGLAVGAVAGALGGLALVEGVDFVEDKIADDVAERVEDDIGYDGDDF 285

[Close]

BLAST of CmoCh18G012880.1 vs. TAIR10
Match: AT5G23950.1 (AT5G23950.1 Calcium-dependent lipid-binding (CaLB domain) family protein)

HSP 1 Score: 161.4 bits (407), Expect = 8.3e-40
Identity = 87/148 (58.78%), Postives = 106/148 (71.62%), Query Frame = 1


Query: 6   EVEVKILSAKDLKNINWRYGGLKPYAVVWIDPKSKSSTKVDAEGDTSPYWDETLVIPF-S 65
           EVEV I SAKD+KN+NWR G  KPYAVVWIDPK KSST+VD +G+T   W+ET VI    
Sbjct: 7   EVEVTISSAKDIKNVNWRNGPNKPYAVVWIDPKFKSSTRVDEDGNTCTTWNETFVIALPP 66

Query: 66  SPIEDSTLYIDVVHVVSGDEDTKPLIGSAKLHLSEVVDDVGLGERSQRTLQLKRPSGRPQ 125
           +  +D  +YI++VH    +E+TKPLIGSA L L +V+DDVG G    +TL+LKRPSGRPQ
Sbjct: 67  ANDDDDKVYINIVH-AGREENTKPLIGSAHLSLRDVIDDVGFGVPFMKTLKLKRPSGRPQ 126

Query: 126 GKIEVKVTVREPRYRPSDSYYAPPYGVP 153
           GK++V VTVRE       S YA PYG P
Sbjct: 127 GKLDVTVTVRE----TPGSNYALPYGDP 149

[Close]

BLAST of CmoCh18G012880.1 vs. TAIR10
Match: AT1G07310.1 (AT1G07310.1 Calcium-dependent lipid-binding (CaLB domain) family protein)

HSP 1 Score: 104.8 bits (260), Expect = 9.2e-23
Identity = 90/256 (35.16%), Postives = 131/256 (51.17%), Query Frame = 1


Query: 6   EVEVKILSAKDLKNINWRYGGLKPYAVVWIDPKSKSSTKVDAEGDTSPYWDETLVIPFSS 65
           ++ V ++SAK LKN+NWR G LKPY V+++D     ST+ D      P W+E + +P + 
Sbjct: 8   DLVVTVVSAKHLKNVNWRNGDLKPYVVLYLDQDHPLSTRSDDSSSIKPVWNERITLPLTR 67

Query: 66  PIEDSTLYIDVVHVVSGDEDTKPLIGSAKLHLSEVVD-DVGLGERSQRTLQLKRPSGRPQ 125
            + +S L I+V H  S D   K L+GS +  L+ ++D D  +      +L+L RPSGRPQ
Sbjct: 68  SVHESVLNIEVFHSNSSDL-AKTLVGSVRFPLARLIDSDGSMIPELINSLELVRPSGRPQ 127

Query: 126 GKIEVKVTVREPRYRPSDSYYAPPYGVPPPGTNRDFSAPPPPQPYAAP---YSAPH-DPY 185
           GKI +K+ +++   RP          +PPP         PPP+P + P   YSAP  + Y
Sbjct: 128 GKIRLKLAIKD---RP----------IPPP-------QHPPPRPQSQPLDYYSAPQGNHY 187

Query: 186 YS-TAPPSGYPYGGYNAPAPYGQSNYGQPSYGQPSYGQPAYGDQVYG----HPEEKKSKY 245
           YS + PP   P     AP+P  Q +Y + S   PS    A+ D  Y      P   +S Y
Sbjct: 188 YSPSPPPPPPPQAPITAPSP--QRDYREFSQ-SPSPSPYAFTDHYYSGYYYPPPPPRSMY 239

Query: 246 GMGT--GLAIGAAAGV 250
              +  GL  G +A V
Sbjct: 248 DRASNYGLPSGPSAPV 239

[Close]

BLAST of CmoCh18G012880.1 vs. TAIR10
Match: AT4G01200.1 (AT4G01200.1 Calcium-dependent lipid-binding (CaLB domain) family protein)

HSP 1 Score: 62.4 bits (150), Expect = 5.2e-10
Identity = 36/138 (26.09%), Postives = 65/138 (47.10%), Query Frame = 1


Query: 7   VEVKILSAKDLKNINWRYGGLKPYAVVWIDPKSKSSTKVDAEGDTSPYWDETLVIPFSSP 66
           +E+ ++SA+ LK    +   L+ YA VW+D  SK  T++D  G  +P W++  V   S  
Sbjct: 7   LEINLISAQGLKEPTGKLRRLQTYASVWVDSSSKLRTRIDRIGSENPIWNDKFVFQVSPE 66

Query: 67  IEDSTLYIDVVHVVSGDEDTKPLIGSAKLHLSEVVDDVGLGERSQRTLQLKRPSGRPQGK 126
              S      + + +       LIG+ +  +S  +    +   S   LQ++RPSG+  G 
Sbjct: 67  FLSSETSGVSIEIYAVGYLRDHLIGTVRFLVSNFLPTAAVKVPSLVALQIRRPSGKFHGV 126

Query: 127 IEVKVTVREPRYRPSDSY 145
           + +   V +    P+D +
Sbjct: 127 LNIAAMVMDASELPADFF 144

[Close]

BLAST of CmoCh18G012880.1 vs. TAIR10
Match: AT2G13350.1 (AT2G13350.1 Calcium-dependent lipid-binding (CaLB domain) family protein)

HSP 1 Score: 55.8 bits (133), Expect = 4.9e-08
Identity = 37/127 (29.13%), Postives = 64/127 (50.39%), Query Frame = 1


Query: 7   VEVKILSAKDLKNINWRYGGLKPYAVVWIDPKSKSSTKVDAEGDTSPYWDETLVIPFSSP 66
           +E+ I+SA++L  +      +K YA+ WIDP+ K +T+VD  G TSP W++  V      
Sbjct: 10  LELNIISAQELAPVA---RCMKTYAIAWIDPERKLTTRVDNTGGTSPTWNDKFVFRLDEE 69

Query: 67  IEDSTLYIDVVHVVSGDEDTKPLIGSAKLHLSEVVDDVGLGERSQR--TLQLKRPSGRPQ 126
                  I V+ + +        +G+ +  +S++V        + R  TL++ R SGRP 
Sbjct: 70  ALYDATSIVVIEIYALHWFKDIHVGTVQALISDLVSP----SSAMRFVTLEVLRASGRPH 129

Query: 127 GKIEVKV 132
           G + + V
Sbjct: 130 GLLNIAV 129

[Close]

BLAST of CmoCh18G012880.1 vs. TAIR10
Match: AT2G33320.1 (AT2G33320.1 Calcium-dependent lipid-binding (CaLB domain) family protein)

HSP 1 Score: 55.5 bits (132), Expect = 6.4e-08
Identity = 40/154 (25.97%), Postives = 75/154 (48.70%), Query Frame = 1


Query: 7   VEVKILSAKDLKNINWRYGGLKPYAVVWIDPKSKSSTKVDAEGDTSPYWDETLVIPFSSP 66
           +E+ I+SA+DL  ++ +   +K YAV W+  + K +T+VD  G  +P W++  V   S  
Sbjct: 10  LELNIISAQDLAPVSRK---MKTYAVAWVHSERKLTTRVDYTGGGNPTWNDKFVFRVSED 69

Query: 67  I--EDSTLYIDVVHVVSGDEDTKPLIGSAKLHLSEVVDD-----VGLGERSQRT------ 126
               D++  +  ++ +    D    +G+ ++ +S ++           E  +RT      
Sbjct: 70  FLYADTSAVVVEIYALHWFRDVH--VGTVRVLISNLIPPNRRPGYRSNEEYRRTPPPGMR 129

Query: 127 ---LQLKRPSGRPQGKIEVKVTVREPRYRPSDSY 145
              LQ++RPSGRPQG + + V + +   R    Y
Sbjct: 130 FVALQVRRPSGRPQGILNIGVGILDGSMRSMPLY 158

[Close]

BLAST of CmoCh18G012880.1 vs. NCBI nr
Match: gi|659077556|ref|XP_008439269.1| (PREDICTED: zinc finger matrin-type protein CG9776 [Cucumis melo])

HSP 1 Score: 474.9 bits (1221), Expect = 9.6e-131
Identity = 249/295 (84.41%), Postives = 264/295 (89.49%), Query Frame = 1


Query: 1   MASRYEVEVKILSAKDLKNINWRYGGLKPYAVVWIDPKSKSSTKVDAEGDTSPYWDETLV 60
           MASRYE+E+KI SA+DLKNINW+YG LKPYAVVWIDP+ KSSTKVDAEGDTSPYWDETLV
Sbjct: 1   MASRYELELKIQSARDLKNINWKYGTLKPYAVVWIDPQQKSSTKVDAEGDTSPYWDETLV 60

Query: 61  IPFSSPIEDSTLYIDVVHVVSGDEDTKPLIGSAKLHLSEVVDDVGLGERSQRTLQLKRPS 120
           IPFSS IEDSTL+IDVVHVV  DEDTKPLIGSA+L L+EVVDDVGLGE SQRTLQLKRPS
Sbjct: 61  IPFSSSIEDSTLHIDVVHVVGADEDTKPLIGSARLPLAEVVDDVGLGESSQRTLQLKRPS 120

Query: 121 GRPQGKIEVKVTVREPRYRPSDSYYAPPYGVPPPGTNRDFSAPPPPQPYAAPYSAPHDPY 180
           GRPQGKIEVKVTVREPRYR SDSYY PPYGVPPPG  RDFSAPPP  PY APYSAP +PY
Sbjct: 121 GRPQGKIEVKVTVREPRYRSSDSYYTPPYGVPPPGIARDFSAPPP--PYGAPYSAPPNPY 180

Query: 181 YSTAPPSGYPYGGYNAP------APYGQSNYGQPSYGQPSYGQPAYGDQV-YGHPEE-KK 240
           YSTAPPSGYPYGGY AP      APYG SNYGQPSYGQ SYGQPAYG+Q  YG PEE KK
Sbjct: 181 YSTAPPSGYPYGGYGAPAPPPAAAPYGHSNYGQPSYGQGSYGQPAYGEQTYYGQPEEKKK 240

Query: 241 SKY--GMGTGLAIGAAAGVLGGLALGEGVEYLEDKIAEDAAERVEDDLGYGDDDF 286
           SKY  GMGTGLA+GAAAG+LGGLA+GEGVEY+EDKIAEDAAERVEDDLGYGD+DF
Sbjct: 241 SKYGMGMGTGLAVGAAAGILGGLAIGEGVEYVEDKIAEDAAERVEDDLGYGDEDF 293

[Close]

BLAST of CmoCh18G012880.1 vs. NCBI nr
Match: gi|778679668|ref|XP_011651176.1| (PREDICTED: uncharacterized protein LOC101213996 [Cucumis sativus])

HSP 1 Score: 466.1 bits (1198), Expect = 4.5e-128
Identity = 239/293 (81.57%), Postives = 262/293 (89.42%), Query Frame = 1


Query: 1   MASRYEVEVKILSAKDLKNINWRYGGLKPYAVVWIDPKSKSSTKVDAEGDTSPYWDETLV 60
           MASRYE+E+KI SAKDLKNINW+YG LKPYAVVWIDPK KSSTKVD +GDTSP+WDETLV
Sbjct: 1   MASRYELELKIQSAKDLKNINWKYGTLKPYAVVWIDPKQKSSTKVDNQGDTSPFWDETLV 60

Query: 61  IPFSSPIEDSTLYIDVVHVVSGDEDTKPLIGSAKLHLSEVVDDVGLGERSQRTLQLKRPS 120
           IPF S IEDSTL+IDVVHVV  DEDTKPLIGSA+L L+E++DDVGLGE SQRTLQLKRPS
Sbjct: 61  IPFFSSIEDSTLHIDVVHVVGADEDTKPLIGSARLPLAELIDDVGLGESSQRTLQLKRPS 120

Query: 121 GRPQGKIEVKVTVREPRYRPSDSYYAPPYGVPPPGTNRDFSAPPPPQPYAAPYSAPHDPY 180
           GRPQGKIEVKVTVREPRYR SDSYY PPYGVPPPG+ RD+SAPPP  PY APYSAP +PY
Sbjct: 121 GRPQGKIEVKVTVREPRYRSSDSYYTPPYGVPPPGSARDYSAPPP--PYVAPYSAPPNPY 180

Query: 181 YSTAPPSGYPYGGYNAPA------PYGQSNYGQPSYGQPSYGQPAYGDQV-YGHPEE-KK 240
           YS APPSGYPYGGY APA      PYGQSNYGQPSYGQ SYGQPAYG+   YG PEE KK
Sbjct: 181 YSAAPPSGYPYGGYGAPAPPPTAPPYGQSNYGQPSYGQGSYGQPAYGEHTYYGQPEEKKK 240

Query: 241 SKYGMGTGLAIGAAAGVLGGLALGEGVEYLEDKIAEDAAERVEDDLGYGDDDF 286
           SK+GMGTGLA+GAAAG+LGGLA+GEGVEY+ED+IAEDAA++VEDDLGYGD+DF
Sbjct: 241 SKFGMGTGLAVGAAAGILGGLAIGEGVEYVEDQIAEDAAQKVEDDLGYGDEDF 291

[Close]

BLAST of CmoCh18G012880.1 vs. NCBI nr
Match: gi|747059492|ref|XP_011076131.1| (PREDICTED: WW domain-containing protein C11B10.08 [Sesamum indicum])

HSP 1 Score: 362.8 bits (930), Expect = 5.3e-97
Identity = 200/287 (69.69%), Postives = 229/287 (79.79%), Query Frame = 1


Query: 1   MASRYEVEVKILSAKDLKNINWRYGGLKPYAVVWIDPKSKSSTKVDAEGDTSPYWDETLV 60
           M SRYEVEV + SAKDLKN+NWR+G LKPYAV+W+DPK+K ST+VD +GDTSPYW+E +V
Sbjct: 1   MGSRYEVEVTVTSAKDLKNVNWRHGQLKPYAVLWVDPKNKCSTRVDEDGDTSPYWEEKVV 60

Query: 61  IPFSSPIEDSTLYIDVVHVVSGDEDTKPLIGSAKLHLSEVVDDVGLGERSQRTLQLKRPS 120
           IPF+SPIEDSTLYID+VH  +  EDTKPLIGSAKL L +VVDD G+G R +R L+LKRPS
Sbjct: 61  IPFNSPIEDSTLYIDIVH-ANDAEDTKPLIGSAKLPLRDVVDDAGMGARVERKLELKRPS 120

Query: 121 GRPQGKIEVKVTVREPRYRPSDSYYAPPYGVPPPGTNRDFSAPPPPQPYAAPYSAPHDPY 180
           GRPQGK+EV V+VREPRYR  D YYAPPYGVPPP T RD+ APP    Y   Y AP  P 
Sbjct: 121 GRPQGKLEVSVSVREPRYRAPDPYYAPPYGVPPPAT-RDYPAPPYGNQY---YGAP--PA 180

Query: 181 YSTAPPSGYPYGGYNAPAPYGQSNYGQPSYGQPS-YGQPAYGDQVYGHPEEKKSKY-GMG 240
           Y+ APPSGYP   Y AP  YGQ +YGQP+YGQ S YG+P YG Q Y   E+KKSK+ GMG
Sbjct: 181 YA-APPSGYP--AYGAPPSYGQPSYGQPAYGQGSYYGEPGYGQQGYVE-EKKKSKFGGMG 240

Query: 241 TGLAIGAAAGVLGGLALGEGVEYLEDKIAEDAAERVEDDLGYGDDDF 286
           TGLA+GA AG LGGLAL EGV+ LEDKIA+DAAERVEDDLGY  DDF
Sbjct: 241 TGLAVGAVAGALGGLALAEGVDALEDKIADDAAERVEDDLGYDGDDF 276

[Close]

BLAST of CmoCh18G012880.1 vs. NCBI nr
Match: gi|661867246|emb|CDP21817.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 359.0 bits (920), Expect = 7.7e-96
Identity = 196/287 (68.29%), Postives = 231/287 (80.49%), Query Frame = 1


Query: 1   MASRYEVEVKILSAKDLKNINWRYGGLKPYAVVWIDPKSKSSTKVDAEGDTSPYWDETLV 60
           M SRYEVEV I SAKDLKN+NWR+G LKPYAVVW+DPK+K ST+VD EGDTSPYW+ETLV
Sbjct: 1   MGSRYEVEVAITSAKDLKNVNWRHGPLKPYAVVWVDPKAKCSTRVDDEGDTSPYWEETLV 60

Query: 61  IPFSSPIEDSTLYIDVVHVVSGDEDTKPLIGSAKLHLSEVVDDVGLGERSQRTLQLKRPS 120
           IPF SPIEDSTL IDVVH  +  EDTKPLIGSA+L L +VVD+ GLG R +R L+LKRPS
Sbjct: 61  IPFDSPIEDSTLLIDVVHAKAA-EDTKPLIGSARLRLIDVVDEAGLGRRVERKLELKRPS 120

Query: 121 GRPQGKIEVKVTVRE-PRYRPSDSYYAPPYGVPPPGTNRDFSAPPPPQPYA-APYSAPHD 180
           GRP GK++V+V+VRE PRYR  D YYAPPYGVP PG +RD++A   PQPY   PY AP  
Sbjct: 121 GRPHGKLQVQVSVREPPRYRAPDPYYAPPYGVPQPG-SRDYAA---PQPYGNPPYGAPPA 180

Query: 181 PYYSTAPPSGYPYGGYNAPAPYGQSNYGQPSYGQPSYGQPAYGDQVYGHPEEKKSKY-GM 240
             Y+ APP+GYP   Y+AP      +YGQPSYGQP+YGQP+YG  VYG  E+KKSK+ GM
Sbjct: 181 SAYA-APPAGYP---YSAPPAAPPPSYGQPSYGQPAYGQPSYGQPVYGE-EKKKSKFGGM 240

Query: 241 GTGLAIGAAAGVLGGLALGEGVEYLEDKIAEDAAERVEDDLGYGDDD 285
           GTGLA+GA AG LGGLAL EG++Y +DKIA+DAAE+VE+D+GY DDD
Sbjct: 241 GTGLAVGAVAGALGGLALFEGIDYAKDKIADDAAEKVEEDIGYDDDD 277

[Close]

BLAST of CmoCh18G012880.1 vs. NCBI nr
Match: gi|694385877|ref|XP_009368751.1| (PREDICTED: WW domain-containing protein C11B10.08 [Pyrus x bretschneideri])

HSP 1 Score: 350.9 bits (899), Expect = 2.1e-93
Identity = 195/292 (66.78%), Postives = 228/292 (78.08%), Query Frame = 1


Query: 1   MASRYEVEVKILSAKDLKNINWRYGGLKPYAVVWIDPKSKSSTKVDAEGDTSPYWDETLV 60
           MAS  EV+VK+ SA DLKN+NWR GG+KPYAVVW+DP  K S++VD EGDTSPYWDETL 
Sbjct: 1   MASGNEVQVKLTSAHDLKNVNWRNGGVKPYAVVWVDPNRKCSSRVDEEGDTSPYWDETLT 60

Query: 61  IPFSSPIE-DSTLYIDVVHVVSGDEDTKPLIGSAKLHLSEVVDDVGLGERSQRTLQLKRP 120
           IP   P++ D+TLYID+VH  S D DTKPLIGSA+L L EV+DDVG  ER+ RTL LKRP
Sbjct: 61  IPLPGPVDGDTTLYIDIVHAGS-DRDTKPLIGSARLKLREVLDDVGFDERASRTLHLKRP 120

Query: 121 SGRPQGKIEVKVTVREPRYRPSDSYYAPPYGVPPPGTNRDFSAPPPP--QPYAAPY-SAP 180
           SGRP GK++VKVT+R+PR R +D YYAPPYGVPPP  +RD  APPP    PY AP   AP
Sbjct: 121 SGRPHGKVDVKVTIRKPRPRVADPYYAPPYGVPPPSGSRDLPAPPPTYGAPYGAPAPPAP 180

Query: 181 HDPYYSTAPPSGYPYGGYN-APAPYGQ-SNYGQPSYGQPSYGQPAYGDQVYGHPEEKKSK 240
           ++PYY+ APPS YPY GYN AP PYGQ + YGQ   GQ SYGQ +YG   YG  E+KKSK
Sbjct: 181 YNPYYAAAPPSDYPYKGYNAAPPPYGQPAPYGQT--GQGSYGQ-SYGQGSYGQEEKKKSK 240

Query: 241 Y-GMGTGLAIGAAAGVLGGLALGEGVEYLEDKIAEDAAERVEDDLGYGDDDF 286
           + GMGTG+A+GA AGVLGGLAL EG EY+EDKIA+DAAE+VEDD  Y DDD+
Sbjct: 241 FGGMGTGVAVGAVAGVLGGLALAEGFEYMEDKIADDAAEKVEDD-QYDDDDY 287

The following BLAST results are available for this feature:

BLAST of CmoCh18G012880.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh18G012880.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LBH6_CUCSA	3.1e-128	81.57	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G183350 PE=4 SV=1	[more]
A0A068VMH9_COFCA	5.4e-96	68.29	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00005975001 PE=4 SV=1	[more]
A0A0V0HFV8_SOLCH	2.8e-92	63.95	Putative ovule protein OS=Solanum chacoense PE=4 SV=1	[more]
M1CXL8_SOLTU	4.7e-92	64.60	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400029920 PE=4 SV=1	[more]
W9R331_9ROSA	4.7e-92	65.42	Uncharacterized protein OS=Morus notabilis GN=L484_003038 PE=4 SV=1	[more]

BLAST of CmoCh18G012880.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G23950.1	8.3e-40	58.78	Calcium-dependent lipid-binding (CaLB domain) family protein	[more]
AT1G07310.1	9.2e-23	35.16	Calcium-dependent lipid-binding (CaLB domain) family protein	[more]
AT4G01200.1	5.2e-10	26.09	Calcium-dependent lipid-binding (CaLB domain) family protein	[more]
AT2G13350.1	4.9e-08	29.13	Calcium-dependent lipid-binding (CaLB domain) family protein	[more]
AT2G33320.1	6.4e-08	25.97	Calcium-dependent lipid-binding (CaLB domain) family protein	[more]

BLAST of CmoCh18G012880.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659077556\|ref\|XP_008439269.1\|	9.6e-131	84.41	PREDICTED: zinc finger matrin-type protein CG9776 [Cucumis melo]	[more]
gi\|778679668\|ref\|XP_011651176.1\|	4.5e-128	81.57	PREDICTED: uncharacterized protein LOC101213996 [Cucumis sativus]	[more]
gi\|747059492\|ref\|XP_011076131.1\|	5.3e-97	69.69	PREDICTED: WW domain-containing protein C11B10.08 [Sesamum indicum]	[more]
gi\|661867246\|emb\|CDP21817.1\|	7.7e-96	68.29	unnamed protein product [Coffea canephora]	[more]
gi\|694385877\|ref\|XP_009368751.1\|	2.1e-93	66.78	PREDICTED: WW domain-containing protein C11B10.08 [Pyrus x bretschneideri]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR000008	C2_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh18G012880	CmoCh18G012880	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh18G012880.1	CmoCh18G012880.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh18G012880.1.CDS.1	CmoCh18G012880.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh18G012880.1.exon.1	CmoCh18G012880.1.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000008	C2 domain	GENE3D	G3DSA:2.60.40.150		coord: 5..135 score: 5.7
IPR000008	C2 domain	PFAM	PF00168	C2	coord: 7..101 score: 8.9
IPR000008	C2 domain	SMART	SM00239	C2_3c	coord: 6..109 score: 6.
IPR000008	C2 domain	PROFILE	PS50004	C2	coord: 1..94 score: 10
IPR000008	C2 domain	unknown	SSF49562	C2 domain (Calcium/lipid-binding domain, CaLB)	coord: 4..134 score: 3.59
None	No IPR available	PANTHER	PTHR32246	FAMILY NOT NAMED	coord: 1..285 score: 3.3E
None	No IPR available	PANTHER	PTHR32246:SF17	SUBFAMILY NOT NAMED	coord: 1..285 score: 3.3E