CmoCh17G005030.1 (mRNA) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh17G005030.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	RNA binding protein
Location	Cmo_Chr17 : 4311125 .. 4321280 (-)
Sequence length	2842

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGAATTTAGGTCAAGTGTTGGTTTTCTCTTACTCACGTTGGCCACTCTTCTATTGCGGCTAGGGTTCTTCTTTTTTCTCCATTTAACTTTTTGTTTTTCTACAACATCCCTGTTCTTTCTTTTATTATATTCATGGAGCTCTTGTTAAGATAGGTTTCCTGGTCGCCTTTCTCGGAGTGGAATTTCCTGTTTTTTGAGGTCTTTTTTGGGGTATTTGGTTTCGAGATTAGTTTGGAAATGGCGACCGTTAATCCTTTTGATTTGTTGGGGGATGATGACGCCGAGGACCCCTCGCAGCTAATTGCGGCTAAGCAGGTGGCGGCAGTAACGGCACCGCCGCCCAAGAAAGGCTCTGCTCAGACCAAACCGGTGGTTTCGCCGTCTCAGCAAAATAAGCCTGCTAGTCTTCCTTCCAAGCCTCTACCACCTTCTCAGGCTGGTAATATTCTTCGTTTCTAAATCTCTGGTTTCATTTGAATATTGATCCTTTCATTTCTCGCTATTGGTTGTTTGAATTTACATTTCTCAGATATAGTTTATTGTTTCTCTTCTAGCTGTTTGAATTTTTTCTCTAAAACTAAGCAAGAGTGATGGGTGGTAGCTGTTTTTAATTCCGTGGAAGTATTGAATTTCCTTTTTCTGCAAACAAAACCTTATGTTTTCTTACTATGATGGTTTTTTGTTTGTGATGATTTTTAATTATTTGAATTTATCGGTAAAACCTTAACTTTACACCTTGCTGAACTTGGTGACTGTTTATTGATTTGGACTCTTTTGCGGGAACTTGGTAGTCTGCAATCAATTTTTCGTTCTTATTTTTGTCTTGCTTTTCTTATAATTTTGTCGTCCTGTTAGATTATAGTTTACCAACCTACTGTTTCTCTAACCATTGGATTCTTATGAGTTTCCATTGGTTGAATTACCCATTGGGAGATTGAGATGGTCTTTTTCTTGCTTTGAGTAGTAAGAGAAGCAAGGAATGAAGGCAGTCGTGGAGGCCGTGGCAGTGGACGAGGTGGAGGACGAGGATATGGGCGAGGCCGTGAGGGTGGGGGCTTCAATCGTGACTTTGCCAATAGTGAGAACACTAGTGCACCTGAGGATGGAGAGGCTGGAAAGACAACTGAAAGGCGTGGATATGGTGGGCCTCGTGGTCGTGGTGGCCGTCGTGGTGGTTTCAATAATGGAGAGGCTGGTGATGGGGAACGCCCTCGTAGAGTATTTGAACGCCACAGTGGAACTGGCCGTGGGTTAGTCTGTTTTTTAAAACCTCATTTTATTCACTCCTTCTGTATAATTTACACTGTTTTGATGCTTTTTTCCTGATTTTTATTCCTAGAAATGAAAACAAACGTGAAGGGGCTGGTCGTGGAAATTGGGGAAGACCAGCTGACGAATTTGCTGAGTAAGTACACGTATATACCCTCCATCAGCGTGGATGTTTTTTTCTGTTAGAAGGCCTCAACCATATAAAGTGAGTTTGGCCAGCCTCATTTTTCTTTAAAGTGGGGGCGGGGTTATATTTTTATGCTTGTGTCATTATCTCTCTATGCTAATAAGGTTATTTTTCTCTCCTTGACAATTAGTTGTACCTTAAAAGTTCTGTTTTATATCTAGGGTAGCAGAGGAAGCTGTTAATGAACCTGAAAAGAATGTGGGTGATGAGAAGCCCGTTCAAGAGGAAGATACATCAGGTGTCAACTCGGAGAACCCTGCTAAAGAACCAGAGGAAACAGAACCAGAAGACAAGGTTAGCTTTACTATACTTACATTTTTGCTTGCATTTCAAATTGAATAGCTTTACTATACTCTTAATATCATAAATCTGATTCATCTAACAGTTGTAAATTTGATTGCATGTTAGCATGGTGAGCTTTGATTATGAACTCCGTTCTACTGTTTTGCTTTATTTTTAATCTAGTTTACTCTTTTGTTCTGATGCAGGAAATGACTCTGGAGGAATATGAAAAGTTGCTTGAGGATAAAAGGAAGGCCCTCATGGCTCTAAAAACTGAGGAGAGGAAGGTGGATCCCAAAGAATTTGCATCCATGCAACAACTTTCAAGCAAGAAGGAGAACAACGACATCTTTATTAAATTGGTACGCACTTAATCCTCTTTTGGAGTTGATTATCGATGGGATCTGATGACACTTGGCTTCTTGGTACATCAAATGAGAATTTAACCATTTCATGTTCTTCTGTTACTCCACCTAGCAGGGATCTGAGAAGGATAAGCGAAAAGAAATTGCAGATAAGGAGGAGAGAACTAAGAAGGTATTATTGCCTCTTCTTATAAACGATTTCTGCCCATTAAATTGTTTACTCAGGTTTGATGTCTAGAAAAATTCTAAAAGTCTTAGGGCAGCCTCCAGCCATTGTCTTTGTGAGGCTGAGTGAGGCTGAGTGTATGTCTAAGCCTTATTTTAAACTTAAAAATCATATAATAACATAACAATATATTGTAAAGAAAAAAAGAAAAATTTCAATTGTCTTTCAATATGCATAAGTTTTCATGAGTTAATCACCTCAAAATGGAGAAACAAAATTGGACCAAAATCTTGCCTTGCCCTCAGAAGATGGAAAAACAATGCAACTCAAGACCCTACGAGCCTTCTTCCAAATTGTTTTGAGGAGTTAAAAGAGCCCAAACAGAAGATGGAAAAACAATGAGAGGAAAATGACAATAGTAAATGAGGTAAGGAAAAGAAAATCAAGAAATAGAGAAAGAACTGACCTTTTAGCTTTCCCTCATCTGTTACCACCCCAAACACTTTTTCCTTCCACAAATGACGGACAAAATTATGGCCGTCTGTTTTTAGGCATAAAGTAGTAGGTTTTTTACATAAAATTTTCTGTAAAGTCAATTATTCAGTGAGTTATATGCCTCATTTAACCGACCTTTTAACTTAAGTTTAACCACACAACTTGCTTTCCTCAAGGCTTATGTTTTGAAAACATAGATGTCCTGCGAGGACATAGGATGCCTTTTATTGGGTCTATTTGGAACCTTCATCAAGAAATTTAATTGATTCTAGAATTTAAAATATGAAAATATGAAAATATGAAAATAGACCTTGTAGAAGGTTAAATTACTAAATTTTCTTTTGTTTTCTTGTTTTTTAGTCTTTGAGTATTAATGAGTTTTTGAGGCCTGCGGAAGGAGAGCGACACTACACCCCAGGTGGCCGGGGAAGGGGTCGTGGTCGTGGTTCAAGGGGAGGATACGGTGGCAGCTCGATAAGCAATGTTGCAGCCCCATCCATTGAGGACCCTGGGCAGTTCCCGACCTTAGGTGCAAAGTGAATTTCTCTATAAATTTTCCCTCGAAAAACTGTGTGTTTTTTTAATCTGGGGCAGGAAATTGACTAGAATAACAGTCGTGTCTCCAGTATCAAAATGATTTTCATGTTTTTCTTCTGGTTTAGGTGTAAATTGTGAAAGTCTTGTATTTGTCCTGGTCTATTTTCCGTTGTGTGTTCTCAACTGTTGTTTCAGACTGTTTGACAGATGAAACTATATATTTATGAGTTCCTTCGTCCCCCACAGAGTATTGTTTACTTCCCAAATGGGGCATGTTGTTGTTGATTTGTTGCCATTCATGGAATTTTTCTGTTGTGATACAGATAGTGAGAGAATATGAGCTAGTTTGTTCTTTTTTGAGTTGGATCTGAAATAGTGGATTGATTTAGTCTCATATTTGTGCGATGGAGGGATGAAAAGCAGTGGGGAATTTAGAATGAGGAATCAACTCTGAGCGAGTTGGGCACTGTGGCAACAATGTGAGCTTGAGATAAAATAAACGGGCGACTGGGAAAGAAAGGTAGAAGGGAAGATAGAAGAACCGAAGGTAGAAAGGGAAGATAGAAGAACCGAAGGTAGAAAGGGAGGAGAGGGAGAGGTTTCTTTATTTCGGATGTCACATCAGTTTAAAAGGCATGACCCTCACACATCCTTAGCTAATAATAATTCACGTGTTATAAACATAATCTAGAGAAGCATAGTATCTAAATAACATGCTTATAATCTACTCCTAATCCATATAAACTATTTGTTAATCATGCTTTAACTTCAATAAAACTATTAGCATACTCACACCACTTGCTCCAAACAATTATTTACTTTGTATTGCTTAAAACCACTCTTAATTTGGTCCTTTTTTAGAATATTTATACTCTCGGCTACCTCTTAATGGATAAAATTTAGTTCCAAAATAATTTATGCCAAATAGGATTGAACGGTTCTACCGTTTTTTCTTATAAGAATTGAAGACCTTTCTAGTGTGTTTTTATCCATAACCTTGATTCCATATACATTTCTCCTAACAATTTAAGGGTCGTACTTATAAGTGTTAAAGCATTTTGTGAACTTGTATTTAAAAGAATGGTGTTTTGGTTACTTTCTCAAGTCATGTATAGACTCCGAACTTCATTTGGTCTCAAATCTTTCTATATTGTGATAACTTTACTTGAAATTTTAAATGTATCATTACCTACTTTAGAATATGTAGATGGAGGAATGTACTCTACCATATTGTTTGTCATTGTAAGAACTTTGTATCGATGCAACGTATAACCTGTAGTATAAGTGTAAGTGCACTATCTCTCATCGAAATGTTGTGATATTGTGGCTGTGTGACATGGTCGAGCTTGTTTTCATTAGTTGTCTTGTTGTGGTATTATTTCTATTTTTTTTTTAAAGTGATGGTCCTTCCCAAATTCAGTCAAGACGAAACCACCAAAACCATATATTTTCTTGTTCTATTGGCTTGGTTTTCTACGTGTTATTATTACTCTTTTAAACTTTCATCTTCCAATCCTTGCTTACTAAATTTATTATTCCTTAGTTTTTTTTTTTTTAAACTTTTCTTCATGTTGTCCAATTCTTATTGTTCTACTAGTTTGTCTTCATGTCATAGGTGACAGGCTTCACATCATATGTGATGGTTTGACTTTTATAGCGTGAGCAATTTCTTGAAGAATGGGATCGGTGGGGCTAAGTTTTGGTGTAACATAGAAATGGTGTCATAACTTTTGTCTTAAATTTATTTAATTTTACTTTGGTTAATTGACTTTTAGTTTGGATGGAGATATCTAGTGATTTATACGTTTTTGGCTTGCCTACCGAATATTGACAATGCTTATGGTTTACAAGAATATTTCCCTATTTCCCTACGGCTTAGCTTTTTCTTTCTTTAATGATTGCTTATCATATTGCTGAATATAACAACAAAAGACAACAAAAAAATTATAAACCGAGAAGAAATGCAATATAAAGTTAAAGATTGTTGGTTATGTATAGGAAGTGAAAGGTGATAACAGACCTGCAATACAAAGTCATCGTATACAAATAATGGAGAATTCAACTTTTTTATTCTATGAAATTACTTAATACTCATTAAAATGTAAATAGATCACAAAGTTTTAATGGTAAATAAAAATGATGGGATATGATATTTAAATAATAAAATGATCATAAAATTACTATATTATAACATTAAAAAAAAAATACTATAATAAGTTATTAAATATATTATAGTTTTAATAAAACGCTATAAAATGTTTTTATAGCAACGTATATAAGCTATAGTTTTATATTCTATTATACTTAAAAAAAGCGATAAAAAGGAGTTCATATTTTTAATAATGTGAGTTGTCACGACGTATGGAAAAAACTATAAAAAGCCTACGATAGTGTTTTTCGTATGCTATTGTATCAATTATTTCTTGCAGTCGGCCTATAGTTACAAAGTTTCATAGCTTCATGTATTGGATATTTTGGATATCGGAGACCTTATTCATACGAATCTATTTTTCATTTTTATTTTAAATGTTACAATTTTCAGTAATTAAGACTAATTTATAAATCAGTAAAAATAAAATAATTTAAATATTTGCCCAAAAAAGTAAAAATCAAATAAAATAAAATAATAATATTATGATATTCCGCACGAGTGATCTAAGGAAACGAAGAAGGCAAAGTAAATTATACGTTTAAGATTTGGTTGTCCATTCCTTGCACGTACACACACTACCGTATGTCACTAACCCATTGCGTCTAGGGTTTTCTCCTGCTTTCTACCGCGTTACGATTTCTTTTCCTTTTTCCTTTCTCTCTTTTTACAGATCCCCTTCGTCTCTCGTTCAGAGATTCATGGAGTTCTTGTTAAGCTAGGATTTCGTGGTCGCCTTTCGCGGAGTGCAATTCCCTTTCAGCTTTTCCGGTATTGGTTTCAACATAGTTCCGAAATGGCGACCACGAATCCATTTGATTTGTTGGGAGATGACGACGCCGAAGACCCATCGCAGCTAATTGCGGCCAAGCACGCGGCGGTGGTGCTGTCTAGGAAAGGTTCTGATCATCCACAGGGCAAACAGGCGGCTGCGGCAGCTAAACAGAACAAACCTGCTAATCTTCCTTCCAAGCCTCTTCCACCTGCTCAGGCTGGTCAGTTTCTTTGTTTTTTCATTGAAAGTTTTGGATTGTGGAAATGTCGGGTTGATTTTGATGATTGATCGTTTTTTTTTTCCCTTTACTGTCTTTGTTCATTGGTTTTGCATTTCCTGATGTTGGTTTGTCCGCTTGTTTGCATGGTTACGTTATTTGCGCCTATGGAAGAGTGCGAAGTCTCTCCTCATGATGCTTTTTTTTTTTTTTTTCTTTCAATATATATATATATATGTTCACGTAGGGGTCATTTCAAATCAGCCAAAATGTCATAAGGTATGATTGCTTTTATCTCTGATACGGTGGTAGAATGTAATAGCCGGCTAGGATGTAGAACGGGAGGAAAGAACAAGGATAAAGGATGTACAAGAGAAATCTCCATACATGTCTACTTGTGAGCGCTAGTTAGAAGCTCCCCTAATGGCACCAGACAATACTCCCTATTCCTGCGTCATTCCAGGCTAGAACAGTGCAAGGTCGGCCCCCCACTAGGCACTATCAAAGCTCCCTTATTAGTACTCTTTAGTGTGTCACGGGCCGTGACATTGCAATTTTACATGCTAATTAGACCCTCACTAGTCGAGGTGAGTTCATAGTTAGGGGTTTCCCTAACCGTCAGGTAAAACATAGGCTAAGGCTCACTAACAGGTCATACATATCATCTTCTAGGGCACATAACATTTAGTTATTGCCGTTAACCGTATGACCATGTTAATGTCTTGCTGACGTTCTCTACTGTTGTCATGTTCACGTCGTTAGGAACAAGGAAGTTGACTCAGCTCTCAACCAACCAGATAGACCTATGAGGACAACTCTAAGTCTCACAATTTACATCAATGATGAAGCTTTTATCTCTATAAATTTTAAGGCTTCAGATAGGTTCAAAGGACTGAACAGATTCTTCCAGGAAGTATTCAATTGGTATAATTTTTTGGTTCTTTTTTATGAGATCCAATTGATATAATGTACGCACAAGTTGGATTTCAATATATTATGGTTGGTTGATTTGTGCTCTTTTGCATTATTTTCTTAATGAAATGTTGTTTTCAATATTTACATTGAAGAGGAACTTATGCGATTAGATTTCTTTTGTCATGAAAATTTCATTGTTTTCTCAAGAAATCATGTTTTGGAGAGCCAAATTGTAGGAAAGGCGTGATGAAGTTAACTGTATGAAGGAAATATTTGCATATACATCCAGATCATGGACTGTTGTACAGATCTGCTTGGCCTCATTATTGCATTCGTGAATTTTCCTGTTTCTTAATATAGAACATGAAAGTCTGCAATCAATTTTTTATTCTTATCTCAAGCATAGGCTTGCCTTTTTCATCCTGTCCATATTACAATATAATTTATTAATGGTCCATTCATTAACCTATTGGGGTCTTATGAGTGCCCCACCCAATTGGTATGAATTATCCATTGGGTAACTGAAAGAATGTTTTCATACTTTTGAGTAGTAAGGGAAGCAAAGAATGAAGGTGGTCGTGGAGGTCGTGGTAGTGGGCGTGGTGGAGGCGGATATGGATATGGGCGAGGCCGTGGCAGCGGTGGCTTCAATCGTGAATTTCCCTATAATGATTACTCATTTAGTAGTAATCCTGAAGATGGAGAGACTGGAAGGACAACAGAAAAGCGTGGTGGATATGGTGGACCTCGTGGTCGTGGTGGCCGTCGTGGTGGTTTTAATAATGGAGAGGCTTCTGATGGTGAACGTTTTCGTGGTGCATTTGAACGCCAAAGTGAAACTGGTTATGGGTGAGTGTTCTTTTTTTAAAACATCAGTTGTATTCATCTGTATCTTCGTCTCTGTTTTGATATTTTCAGCCTGTTTTTTAACTTAGAAATGACTTCAAGCGTGAAGGATCTGGGCGTGGGAACTGGGGAAGGCCAACTGACGAATTTTCTGAGTAAGTACGTCTACATTTTTGGAAGTTTCTGTATGTTCCTTCTTGTTTCCTATAAACTGAGAGGCGGATGTTGCTGGAAGTTTTTATACATGTGCAAACTCTTGTATGCTGAGAGGCTAGTTTATTTTGCATACAGGGGTGCAGAGGAAGTTAACGAAACTCAAAAGAAGGTAGGTGATGAGAAGCCTGTTCATGAGGACGATGAGAGCTCTGCTAAACAATTGGAGGAAAAAGAACCAGAAGACAAGGTTTGTGTCTTCAGGTTTTTTGGTAGTCTTCTTTCAAACTTGCAGCCTACCATTTCACTTGTCATTGGTTTTTCTTGTGGATTGAATATAAATTTGTACTTTGCTTGCTTACCAAACCAATGAATGCCATTTAGAATCCAAGTTGTAAATTTGATTACGAATAGGCTTCGTGGGCTTTGATTATGAACATCACCGTGATTTTGATTCTACCTTTTACTCTTTTCTTTTATCCTGATGCAGGAAATGACTCTGGAGGAGTATGAAAAGTTGAAGGAGGAGAAAAGGAAGGCCCTTCTGGCACTAAAAACTGAGGAGAGGAAGGTAGATCCTAAAGAATTTGCATCTATGCAACAACTTTCAAGCAAAAAGGACAACCAGGACGTCTTTATTAAATTGGTACACTTACTTTAATCTTCCTTTGGAGTTAAAATTATTTATTGCTCTGATGACCCTTGGCTCCTTGGTATATCGGATATTGACTTAGACTTGGCCATTTGATCTTTTCATTTGTTCCACCTGTAGGGATCTGATAAGGATAAGCGTAAAGAAATTGCAGATAAGGAGGAGAGAACTAAGAAGGTATTTCCTCTTGTATATTACATGATTTCTTGCCCATTACATTGTTTTCTCAAGTTTAGTTTTGTTTTCAACTGGTGAAAAATGTTCTATTGTGATGCTTCTTAGTTGAATTAAGCAATCCAAATGTATTTTAGTTGGTTTAATTTACTCGTATTACTTTTGCGGATTCACTCTCCTATTTGGAACAAAGCTTAAAAAAGAGGGAGTTTGGGGCTTCGGTTCAACATTTAACTTGGGTTTATTTGGTTGTGATGGGGAAAACTGGGTGTTGGGGGTTTCAATAATGATATTTAAGAAGAACAACTTAGCTAAGAAATTGGTTCATTTATAAAAGTTTTACTCAACTTGGTTCTAAATAAAATAATATGTCCATGATCGTAACTTGAATTATGTGTTGCAGACTTAATAATAGAGTAATGTTTTCCATATCATAGAAGGAACAGACCTTGTGACGTTATAAAAGTCTGATCTTTCTGTTGCTTTGTTTTGTTTTTTGTAGTCCTTGAGTATTAACGAGTTCTTGAAGCCTGCTGAAGGAGAGAGACACTACATGCCAGGCGGTCGGGGTAGGGGCCGGGGCCGGGGCCGGGGCTCAAGGGGAGGTTATGTTGGCAGCTCGATGAACAGCTCAATGAGCAGCAATGTTGCAGCAGCTCCCTCGATCGAGGATCCAGGTCAGTTCCCAACCTTAGGTGCGAAATGAAATTCTGAATAAATTGGACTCGAAACTGTGTTATATGGTTTTGGGCGTTCTCTCTTTGATGTGGGGTTCCTTCCCTGTGTTACAAAGAGTTCAACTAAGTTTTATTTGTTTAGATGTAAATTGTGAAAGCCGTGTATTTTTCCTTATCATTTTCCATCCTGTGTGCTTTTCAACAGTTGTTTCGGATTTGCCATATCCAACTATTTATTTCATTTTACCTTATACCATATTCTTATTCTCTGTTCCCAAAATGGGTTTTGTTTGGCC

mRNA sequence

AGGAATTTAGGTCAAGTGTTGGTTTTCTCTTACTCACGTTGGCCACTCTTCTATTGCGGCTAGGGTTCTTCTTTTTTCTCCATTTAACTTTTTGTTTTTCTACAACATCCCTGTTCTTTCTTTTATTATATTCATGGAGCTCTTGTTAAGATAGGTTTCCTGGTCGCCTTTCTCGGAGTGGAATTTCCTGTTTTTTGAGGTCTTTTTTGGGGTATTTGGTTTCGAGATTAGTTTGGAAATGGCGACCGTTAATCCTTTTGATTTGTTGGGGGATGATGACGCCGAGGACCCCTCGCAGCTAATTGCGGCTAAGCAGGTGGCGGCAGTAACGGCACCGCCGCCCAAGAAAGGCTCTGCTCAGACCAAACCGGTGGTTTCGCCGTCTCAGCAAAATAAGCCTGCTAGTCTTCCTTCCAAGCCTCTACCACCTTCTCAGGCTGTAAGAGAAGCAAGGAATGAAGGCAGTCGTGGAGGCCGTGGCAGTGGACGAGGTGGAGGACGAGGATATGGGCGAGGCCGTGAGGGTGGGGGCTTCAATCGTGACTTTGCCAATAGTGAGAACACTAGTGCACCTGAGGATGGAGAGGCTGGAAAGACAACTGAAAGGCGTGGATATGGTGGGCCTCGTGGTCGTGGTGGCCGTCGTGGTGGTTTCAATAATGGAGAGGCTGGTGATGGGGAACGCCCTCGTAGAGTATTTGAACGCCACAGTGGAACTGGCCGTGGAAATGAAAACAAACGTGAAGGGGCTGGTCGTGGAAATTGGGGAAGACCAGCTGACGAATTTGCTGAGGTAGCAGAGGAAGCTGTTAATGAACCTGAAAAGAATGTGGGTGATGAGAAGCCCGTTCAAGAGGAAGATACATCAGGTGTCAACTCGGAGAACCCTGCTAAAGAACCAGAGGAAACAGAACCAGAAGACAAGGAAATGACTCTGGAGGAATATGAAAAGTTGCTTGAGGATAAAAGGAAGGCCCTCATGGCTCTAAAAACTGAGGAGAGGAAGGTGGATCCCAAAGAATTTGCATCCATGCAACAACTTTCAAGCAAGAAGGAGAACAACGACATCTTTATTAAATTGGGATCTGAGAAGGATAAGCGAAAAGAAATTGCAGATAAGGAGGAGAGAACTAAGAAGTCTTTGAGTATTAATGAGTTTTTGAGGCCTGCGGAAGGAGAGCGACACTACACCCCAGGTGGCCGGGGAAGGGGTCGTGGTCGTGGTTCAAGGGGAGGATACGGTGGCAGCTCGATAAGCAATGTTGCAGCCCCATCCATTGAGGACCCTGGGCAGTTCCCGACCTTAGGTGTAAATTGTGAAAGTCTTGTATTTGTCCTGATCCCCTTCGTCTCTCGTTCAGAGATTCATGGAGTTCTTGTTAAGCTAGGATTTCGTGGTCGCCTTTCGCGGAGTGCAATTCCCTTTCAGCTTTTCCGGTATTGGTTTCAACATAGTTCCGAAATGGCGACCACGAATCCATTTGATTTGTTGGGAGATGACGACGCCGAAGACCCATCGCAGCTAATTGCGGCCAAGCACGCGGCGGTGGTGCTGTCTAGGAAAGGTTCTGATCATCCACAGGGCAAACAGGCGGCTGCGGCAGCTAAACAGAACAAACCTGCTAATCTTCCTTCCAAGCCTCTTCCACCTGCTCAGGCTGTAAGGGAAGCAAAGAATGAAGGTGGTCGTGGAGGTCGTGGTAGTGGGCGTGGTGGAGGCGGATATGGATATGGGCGAGGCCGTGGCAGCGGTGGCTTCAATCGTGAATTTCCCTATAATGATTACTCATTTAGTAGTAATCCTGAAGATGGAGAGACTGGAAGGACAACAGAAAAGCGTGGTGGATATGGTGGACCTCGTGGTCGTGGTGGCCGTCGTGGTGGTTTTAATAATGGAGAGGCTTCTGATGGTGAACGTTTTCGTGGTGCATTTGAACGCCAAAGTGAAACTGGTTATGGCCTGTTTTTTAACTTAGAAATGACTTCAAGCGTGAAGGATCTGGGCGTGGGAACTGGGGAAGGCCAACTGACGAATTTTCTGAGTAAGGGTGCAGAGGAAGTTAACGAAACTCAAAAGAAGGTAGGTGATGAGAAGCCTGTTCATGAGGACGATGAGAGCTCTGCTAAACAATTGGAGGAAAAAGAACCAGAAGACAAGGAAATGACTCTGGAGGAGTATGAAAAGTTGAAGGAGGAGAAAAGGAAGGCCCTTCTGGCACTAAAAACTGAGGAGAGGAAGGTAGATCCTAAAGAATTTGCATCTATGCAACAACTTTCAAGCAAAAAGGACAACCAGGACGTCTTTATTAAATTGGGATCTGATAAGGATAAGCGTAAAGAAATTGCAGATAAGGAGGAGAGAACTAAGAAGTCCTTGAGTATTAACGAGTTCTTGAAGCCTGCTGAAGGAGAGAGACACTACATGCCAGGCGGTCGGGGTAGGGGCCGGGGCCGGGGCCGGGGCTCAAGGGGAGGTTATGTTGGCAGCTCGATGAACAGCTCAATGAGCAGCAATGTTGCAGCAGCTCCCTCGATCGAGGATCCAGGTCAGTTCCCAACCTTAGGTGCGAAATGAAATTCTGAATAAATTGGACTCGAAACTGTGTTATATGGTTTTGGGCGTTCTCTCTTTGATGTGGGGTTCCTTCCCTGTGTTACAAAGAGTTCAACTAAGTTTTATTTGTTTAGATGTAAATTGTGAAAGCCGTGTATTTTTCCTTATCATTTTCCATCCTGTGTGCTTTTCAACAGTTGTTTCGGATTTGCCATATCCAACTATTTATTTCATTTTACCTTATACCATATTCTTATTCTCTGTTCCCAAAATGGGTTTTGTTTGGCC

Coding sequence (CDS)

ATGGCGACCGTTAATCCTTTTGATTTGTTGGGGGATGATGACGCCGAGGACCCCTCGCAGCTAATTGCGGCTAAGCAGGTGGCGGCAGTAACGGCACCGCCGCCCAAGAAAGGCTCTGCTCAGACCAAACCGGTGGTTTCGCCGTCTCAGCAAAATAAGCCTGCTAGTCTTCCTTCCAAGCCTCTACCACCTTCTCAGGCTGTAAGAGAAGCAAGGAATGAAGGCAGTCGTGGAGGCCGTGGCAGTGGACGAGGTGGAGGACGAGGATATGGGCGAGGCCGTGAGGGTGGGGGCTTCAATCGTGACTTTGCCAATAGTGAGAACACTAGTGCACCTGAGGATGGAGAGGCTGGAAAGACAACTGAAAGGCGTGGATATGGTGGGCCTCGTGGTCGTGGTGGCCGTCGTGGTGGTTTCAATAATGGAGAGGCTGGTGATGGGGAACGCCCTCGTAGAGTATTTGAACGCCACAGTGGAACTGGCCGTGGAAATGAAAACAAACGTGAAGGGGCTGGTCGTGGAAATTGGGGAAGACCAGCTGACGAATTTGCTGAGGTAGCAGAGGAAGCTGTTAATGAACCTGAAAAGAATGTGGGTGATGAGAAGCCCGTTCAAGAGGAAGATACATCAGGTGTCAACTCGGAGAACCCTGCTAAAGAACCAGAGGAAACAGAACCAGAAGACAAGGAAATGACTCTGGAGGAATATGAAAAGTTGCTTGAGGATAAAAGGAAGGCCCTCATGGCTCTAAAAACTGAGGAGAGGAAGGTGGATCCCAAAGAATTTGCATCCATGCAACAACTTTCAAGCAAGAAGGAGAACAACGACATCTTTATTAAATTGGGATCTGAGAAGGATAAGCGAAAAGAAATTGCAGATAAGGAGGAGAGAACTAAGAAGTCTTTGAGTATTAATGAGTTTTTGAGGCCTGCGGAAGGAGAGCGACACTACACCCCAGGTGGCCGGGGAAGGGGTCGTGGTCGTGGTTCAAGGGGAGGATACGGTGGCAGCTCGATAAGCAATGTTGCAGCCCCATCCATTGAGGACCCTGGGCAGTTCCCGACCTTAGGTGTAAATTGTGAAAGTCTTGTATTTGTCCTGATCCCCTTCGTCTCTCGTTCAGAGATTCATGGAGTTCTTGTTAAGCTAGGATTTCGTGGTCGCCTTTCGCGGAGTGCAATTCCCTTTCAGCTTTTCCGGTATTGGTTTCAACATAGTTCCGAAATGGCGACCACGAATCCATTTGATTTGTTGGGAGATGACGACGCCGAAGACCCATCGCAGCTAATTGCGGCCAAGCACGCGGCGGTGGTGCTGTCTAGGAAAGGTTCTGATCATCCACAGGGCAAACAGGCGGCTGCGGCAGCTAAACAGAACAAACCTGCTAATCTTCCTTCCAAGCCTCTTCCACCTGCTCAGGCTGTAAGGGAAGCAAAGAATGAAGGTGGTCGTGGAGGTCGTGGTAGTGGGCGTGGTGGAGGCGGATATGGATATGGGCGAGGCCGTGGCAGCGGTGGCTTCAATCGTGAATTTCCCTATAATGATTACTCATTTAGTAGTAATCCTGAAGATGGAGAGACTGGAAGGACAACAGAAAAGCGTGGTGGATATGGTGGACCTCGTGGTCGTGGTGGCCGTCGTGGTGGTTTTAATAATGGAGAGGCTTCTGATGGTGAACGTTTTCGTGGTGCATTTGAACGCCAAAGTGAAACTGGTTATGGCCTGTTTTTTAACTTAGAAATGACTTCAAGCGTGAAGGATCTGGGCGTGGGAACTGGGGAAGGCCAACTGACGAATTTTCTGAGTAAGGGTGCAGAGGAAGTTAACGAAACTCAAAAGAAGGTAGGTGATGAGAAGCCTGTTCATGAGGACGATGAGAGCTCTGCTAAACAATTGGAGGAAAAAGAACCAGAAGACAAGGAAATGACTCTGGAGGAGTATGAAAAGTTGAAGGAGGAGAAAAGGAAGGCCCTTCTGGCACTAAAAACTGAGGAGAGGAAGGTAGATCCTAAAGAATTTGCATCTATGCAACAACTTTCAAGCAAAAAGGACAACCAGGACGTCTTTATTAAATTGGGATCTGATAAGGATAAGCGTAAAGAAATTGCAGATAAGGAGGAGAGAACTAAGAAGTCCTTGAGTATTAACGAGTTCTTGAAGCCTGCTGAAGGAGAGAGACACTACATGCCAGGCGGTCGGGGTAGGGGCCGGGGCCGGGGCCGGGGCTCAAGGGGAGGTTATGTTGGCAGCTCGATGAACAGCTCAATGAGCAGCAATGTTGCAGCAGCTCCCTCGATCGAGGATCCAGGTCAGTTCCCAACCTTAGGTGCGAAATGA

Homology

[Close]

BLAST of CmoCh17G005030.1 vs. TrEMBL
Match: A0A0A0K9Z4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G106180 PE=4 SV=1)

HSP 1 Score: 555.8 bits (1431), Expect = 8.1e-155
Identity = 307/359 (85.52%), Postives = 327/359 (91.09%), Query Frame = 1


Query: 1   MATVNPFDLLGDDDAEDPSQLIAAKQVAAVTAPPPKKGSAQTKPVVSPSQQNKPASLPSK 60
           M T+NPFDLLGDDDAEDPSQLIAAK  A  TAP  KK  AQTKP+ S +Q NKPASLPSK
Sbjct: 1   MTTLNPFDLLGDDDAEDPSQLIAAKVAAVATAPLSKKAPAQTKPLPSGAQLNKPASLPSK 60

Query: 61  PLPPSQAVREARNEGSRGGRGSGRGGGRGYG--RGREGGGFNRDFANSENTSAPEDGEAG 120
           PLPP+QAVRE+RNEGSRGGRGSGRGGGRGYG  RGREGGGFNRD  N+EN +APEDG  G
Sbjct: 61  PLPPAQAVRESRNEGSRGGRGSGRGGGRGYGYGRGREGGGFNRDSTNNENINAPEDGVGG 120

Query: 121 KTTERRGYGGPRGRGGRRGGFNNGEAGDGERPRRVFERHSGTGRGNENKREGAGRGNWGR 180
           KT+ERRGYGGPRGRGGRRGGFN+GE  +GERPRR FERHSGTGRGNE KREG+GRGNWGR
Sbjct: 121 KTSERRGYGGPRGRGGRRGGFNDGEGAEGERPRRAFERHSGTGRGNEFKREGSGRGNWGR 180

Query: 181 PADEFAEVAEEAVNEPEKNVGDEKPVQEEDTSGVNSENPAKEPEETEPEDKEMTLEEYEK 240
             DEFAEVA E VNE EKNVGDEKP+QE+DTSGVN+ENPAKEP+ETEPEDKEMTLEEYEK
Sbjct: 181 STDEFAEVAGETVNETEKNVGDEKPIQEDDTSGVNTENPAKEPQETEPEDKEMTLEEYEK 240

Query: 241 LLEDKRKALMALKTEERKVDPKEFASMQQLSSKKENNDIFIKLGSEKDKRKEIADKEERT 300
           LLEDKRKAL+ALKTEERKVDPKEFASMQQLSSKK+NNDIFIKLGSEKDKRKE+ADKEERT
Sbjct: 241 LLEDKRKALLALKTEERKVDPKEFASMQQLSSKKDNNDIFIKLGSEKDKRKEMADKEERT 300

Query: 301 KKSLSINEFLRPAEGERHYTPGGRGRGRGRGSRGGYGGSSISNVAAPSIEDPGQFPTLG 358
           KKSLSINEFLRPA+GERHY PGGRGRGRGRGSRGGY GS +SNVAAPSI DPGQFPTLG
Sbjct: 301 KKSLSINEFLRPADGERHYAPGGRGRGRGRGSRGGYSGSPMSNVAAPSIGDPGQFPTLG 359

[Close]

BLAST of CmoCh17G005030.1 vs. TrEMBL
Match: A0A0A0KCI2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G105680 PE=4 SV=1)

HSP 1 Score: 476.1 bits (1224), Expect = 8.2e-131
Identity = 295/379 (77.84%), Postives = 314/379 (82.85%), Query Frame = 1


Query: 409 MATTNPFDLLGDDDAEDPSQLIAAKHAAVVLSRKGSDHPQGKQ-AAAAAKQNKPANLPSK 468
           MATTNPFDLLGDDDAEDPSQL+A K AA    +KGSDHPQ KQ AAAAAK +KPANLPSK
Sbjct: 1   MATTNPFDLLGDDDAEDPSQLMAVKQAAAA-PKKGSDHPQAKQQAAAAAKLSKPANLPSK 60

Query: 469 PLPPAQAVREAKNEGGRGGRGSGRGGGGYGYGRGRGSGGFNREFPYNDYSFSSNPEDGET 528
           PLPPAQAVREAKNEGGRGGR SGR  GG GYGRGRGSGGFNRE P N+YSFSSNPEDGET
Sbjct: 61  PLPPAQAVREAKNEGGRGGRSSGR--GGRGYGRGRGSGGFNRESPNNEYSFSSNPEDGET 120

Query: 529 GRTTEKRGGYGGPRGRGGRRGGFNNGEASDGERFRGAFERQSETGYGLFFNLEMTSSVKD 588
           GRTTEKRGGYGGPRGRGGRRGGF NG+ +DGER RGAFER S TG G  F  E       
Sbjct: 121 GRTTEKRGGYGGPRGRGGRRGGFYNGDTADGERPRGAFERHSGTGRGNEFKRE------- 180

Query: 589 LGVGTGE-GQLTNFLSKGAEEVNETQKKVGDEKPVHEDD------ESSAKQLEEKEPEDK 648
            G G G  G+      + AEE NE+Q K+GDEKPVHEDD      E+ AK+ EEKEPEDK
Sbjct: 181 -GSGRGNWGRSAEEFPEVAEEANESQ-KLGDEKPVHEDDTAGVNTENPAKESEEKEPEDK 240

Query: 649 EMTLEEYEKLKEEKRKALLALKTEERKVDPKEFASMQQLSSKKDNQDVFIKLGSDKDKRK 708
           EMTLEEYEKL +EKRK+LLALKTEERKVDPKEFAS+QQLSSKK+NQD+FIKLGSDKDKRK
Sbjct: 241 EMTLEEYEKLLDEKRKSLLALKTEERKVDPKEFASLQQLSSKKENQDIFIKLGSDKDKRK 300

Query: 709 EIADKEERTKKSLSINEFLKPAEGERHYMPGGRGRGRGRG-RGSRGGYVGSSMNSSMSSN 768
           E ADKEERTKKS+SINEFLKPAEGE+HY PGGRGRGRGRG RG  GGYVG    SSMSSN
Sbjct: 301 ETADKEERTKKSVSINEFLKPAEGEKHYTPGGRGRGRGRGSRG--GGYVG----SSMSSN 360

Query: 769 VAAAPSIEDPGQFPTLGAK 779
           V AAPSIEDPGQFPTLGAK
Sbjct: 361 V-AAPSIEDPGQFPTLGAK 360

[Close]

BLAST of CmoCh17G005030.1 vs. TrEMBL
Match: D7SLZ5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0021g01420 PE=4 SV=1)

HSP 1 Score: 441.0 bits (1133), Expect = 2.9e-120
Identity = 264/370 (71.35%), Postives = 299/370 (80.81%), Query Frame = 1


Query: 1   MATVNPFDLLGDDDAEDPSQLIAAKQVAAVTAPPPKKGSAQTKPVVSPSQQNKPASLPSK 60
           MAT+NPFDLLGDDD+EDPSQLIAA+++       PKK  A T+   +P+QQ KPA LPSK
Sbjct: 1   MATMNPFDLLGDDDSEDPSQLIAAQKIV------PKKALAPTQ-AAAPAQQAKPAKLPSK 60

Query: 61  PLPPSQAVREARNEGSRGGRGSGRGGGRGYGRGREGGGFNRDFANSENT----------S 120
           P+PP+QAVRE +NE  RGG   GRGG RGYGRGR GGGFNRD+AN+EN+           
Sbjct: 61  PVPPAQAVREGKNESGRGG---GRGG-RGYGRGRGGGGFNRDYANNENSFSNMGVAGGQG 120

Query: 121 APEDGEAGKTTERRGYGGPRGR-GGRRGGFNNGEAGDGERPRRVFERHSGTGRGNENKRE 180
           APEDGE GK +ERR YGGPR    GRRGGF+NGEAGDG+RPRR FER SGTGRGNE KRE
Sbjct: 121 APEDGEGGKPSERRNYGGPRPPFRGRRGGFSNGEAGDGDRPRRAFERRSGTGRGNELKRE 180

Query: 181 GAGRGNWGRPADEFAEVAEEAVNEPEKNVGDEKPVQEEDTSGVNSENPAKEPEETEPEDK 240
           G+GRGNWG   DE + V EE VNE EKN+G EKPV EED +  N ENP  EPEE EPE+K
Sbjct: 181 GSGRGNWGTETDELSGVTEEVVNEGEKNLGAEKPVGEEDVADGNKENPVNEPEEKEPEEK 240

Query: 241 EMTLEEYEKLLEDKRKALMALKTEERKVD-PKEFASMQQLSSKKENNDIFIKLGSEKDKR 300
           EMTLEEYEK+LE++RKAL  LKTEERKVD  KEF SMQQLSSKK N+DIFIKLGS+KDKR
Sbjct: 241 EMTLEEYEKVLEERRKALQTLKTEERKVDVDKEFKSMQQLSSKKGNDDIFIKLGSDKDKR 300

Query: 301 KEIADKEERTKKSLSINEFLRPAEGERHYTPGGRGRGRGRGSRGGY-GGSSISNVAAPSI 358
           KE A+KEER KK++SINEFL+PAEGER Y+PGGRGRGRGRGSRGGY GG+++SNVAAPSI
Sbjct: 301 KEAAEKEERAKKAVSINEFLKPAEGERFYSPGGRGRGRGRGSRGGYGGGNAMSNVAAPSI 359

[Close]

BLAST of CmoCh17G005030.1 vs. TrEMBL
Match: A0A0L9VU54_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan11g165500 PE=4 SV=1)

HSP 1 Score: 428.7 bits (1101), Expect = 1.5e-116
Identity = 257/368 (69.84%), Postives = 298/368 (80.98%), Query Frame = 1


Query: 1   MATVNPFDLLGDDDAEDPSQLIAAKQVAAVTAPPPKKGSAQTKPVVSPSQQNKPASLPSK 60
           MAT NPFDLLGDD AEDPSQLIAA+Q+ A  AP  ++G A  +   + +QQ+KPA LPSK
Sbjct: 1   MATANPFDLLGDD-AEDPSQLIAAEQLKAAAAPKKEQGKAGPR-AGAVAQQSKPAQLPSK 60

Query: 61  PLPPSQAVREARNEGSRGGRGSGRGGGRGYGRGREGG-GFNRDFANSENTSAPE-----D 120
           P+PP+QAVREA+NE S GGRG    GGRGYGRGR GG GF RDF+N EN+SAP      +
Sbjct: 61  PVPPTQAVREAKNETSYGGRG----GGRGYGRGRGGGSGFGRDFSNEENSSAPANQGSFE 120

Query: 121 GEAGKTTERRGYGGPRG--RG---GRRGGFNNGEAGDGERPRRVFERHSGTGRGNENKRE 180
           GEAG  +ERRGYG PRG  RG   GRRGGF+NGE GD  RPRR FERHSGTGRGNE KR+
Sbjct: 121 GEAGNPSERRGYGAPRGPYRGSGRGRRGGFSNGEVGDDGRPRRAFERHSGTGRGNEYKRD 180

Query: 181 GAGRGNWGRPADEFAEVAEEAVNEPEKNVGDEKPVQEEDTSGVNSENPAKEPEETEPEDK 240
           GAGRGNWG  +DE A+V EE  +E EKN GDEKPV EED +G N ++PA E EE EPEDK
Sbjct: 181 GAGRGNWGTQSDEIAQVTEEVADETEKNFGDEKPVGEEDAAGGNKDSPATENEEKEPEDK 240

Query: 241 EMTLEEYEKLLEDKRKALMALKTEERKVDPKEFASMQQLSSKKENNDIFIKLGSEKDKRK 300
           EMTLEEYEK+LE++RKAL ALKTE RKVD KEFA+MQ LS+KK+N++IFIKLGSEKDKRK
Sbjct: 241 EMTLEEYEKVLEERRKALQALKTETRKVDIKEFATMQPLSNKKDNDEIFIKLGSEKDKRK 300

Query: 301 EIADKEERTKKSLSINEFLRPAEGERHYTPGGRGRGRGRGSRGGYGGSSISNVAAPSIED 358
           +  +KEER+KKS++INEFL+PAEGER+Y   GRGRGRGRG+RGGY G++ SNVAAPSIED
Sbjct: 301 DALEKEERSKKSVNINEFLKPAEGERYYNTSGRGRGRGRGARGGYSGNAGSNVAAPSIED 360

[Close]

BLAST of CmoCh17G005030.1 vs. TrEMBL
Match: A0A0S3SVR0_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.09G013200 PE=4 SV=1)

HSP 1 Score: 428.7 bits (1101), Expect = 1.5e-116
Identity = 257/368 (69.84%), Postives = 298/368 (80.98%), Query Frame = 1


Query: 1   MATVNPFDLLGDDDAEDPSQLIAAKQVAAVTAPPPKKGSAQTKPVVSPSQQNKPASLPSK 60
           MAT NPFDLLGDD AEDPSQLIAA+Q+ A  AP  ++G A  +   + +QQ+KPA LPSK
Sbjct: 1   MATANPFDLLGDD-AEDPSQLIAAEQLKAAAAPKKEQGKAGPR-AGAVAQQSKPAQLPSK 60

Query: 61  PLPPSQAVREARNEGSRGGRGSGRGGGRGYGRGREGG-GFNRDFANSENTSAPE-----D 120
           P+PP+QAVREA+NE S GGRG    GGRGYGRGR GG GF RDF+N EN+SAP      +
Sbjct: 61  PVPPTQAVREAKNETSYGGRG----GGRGYGRGRGGGSGFGRDFSNEENSSAPANQGSFE 120

Query: 121 GEAGKTTERRGYGGPRG--RG---GRRGGFNNGEAGDGERPRRVFERHSGTGRGNENKRE 180
           GEAG  +ERRGYG PRG  RG   GRRGGF+NGE GD  RPRR FERHSGTGRGNE KR+
Sbjct: 121 GEAGNPSERRGYGAPRGPYRGSGRGRRGGFSNGEVGDDGRPRRAFERHSGTGRGNEYKRD 180

Query: 181 GAGRGNWGRPADEFAEVAEEAVNEPEKNVGDEKPVQEEDTSGVNSENPAKEPEETEPEDK 240
           GAGRGNWG  +DE A+V EE  +E EKN GDEKPV EED +G N ++PA E EE EPEDK
Sbjct: 181 GAGRGNWGTQSDEIAQVTEEVADETEKNFGDEKPVGEEDAAGGNKDSPATENEEKEPEDK 240

Query: 241 EMTLEEYEKLLEDKRKALMALKTEERKVDPKEFASMQQLSSKKENNDIFIKLGSEKDKRK 300
           EMTLEEYEK+LE++RKAL ALKTE RKVD KEFA+MQ LS+KK+N++IFIKLGSEKDKRK
Sbjct: 241 EMTLEEYEKVLEERRKALQALKTETRKVDIKEFATMQPLSNKKDNDEIFIKLGSEKDKRK 300

Query: 301 EIADKEERTKKSLSINEFLRPAEGERHYTPGGRGRGRGRGSRGGYGGSSISNVAAPSIED 358
           +  +KEER+KKS++INEFL+PAEGER+Y   GRGRGRGRG+RGGY G++ SNVAAPSIED
Sbjct: 301 DALEKEERSKKSVNINEFLKPAEGERYYNTSGRGRGRGRGARGGYSGNAGSNVAAPSIED 360

[Close]

BLAST of CmoCh17G005030.1 vs. TAIR10
Match: AT4G16830.1 (AT4G16830.1 Hyaluronan / mRNA binding family)

HSP 1 Score: 273.9 bits (699), Expect = 3.1e-73
Identity = 208/378 (55.03%), Postives = 251/378 (66.40%), Query Frame = 1


Query: 1   MATVNPFDLLGDDDAEDPSQLIAAKQVAAVTAPPPKKGSAQTKPVVSPSQQNKPASLPSK 60
           MAT+NPFDLL DDDAEDPSQL  A +    +    K G   + P  S  +      LPSK
Sbjct: 1   MATLNPFDLL-DDDAEDPSQLAVAIEKIDKSK---KSGQVSSLPAKSAPK------LPSK 60

Query: 61  PLPPSQAVREARNEGSRGGRGSGRGGGRGYGRGREGGGFNRDFANSEN----TSAPEDGE 120
           PLPP+QAVREAR++  RGG G G     G+ RGR  GG+NRD  N+      T    +G+
Sbjct: 61  PLPPAQAVREARSDAPRGGGGRG-----GFNRGR--GGYNRDDGNNGYSGGYTKPSGEGD 120

Query: 121 AGKTT-ERRGYGG-PRGR---------GGRRGGFNNGEAGDGERPRRVFERHSGTGRGNE 180
             K++ ERRG GG PRG          GGRRGGF+N E GDGERPRR FER SGTGRG++
Sbjct: 121 VSKSSYERRGGGGAPRGSFRGEGGGPGGGRRGGFSN-EGGDGERPRRAFERRSGTGRGSD 180

Query: 181 NKREGAGRGNWGRPADEFAEVAEEAVN-EPEKNVGDEKPVQEEDTSGVNSENPAKEPEET 240
            KR+G+GRGNWG P +E A   E     E EK+VG EKP  ++  +  N E+   E  E 
Sbjct: 181 FKRDGSGRGNWGTPGEEIAAETEAVAGVETEKDVG-EKPAVDDVAADANKEDTVVE--EK 240

Query: 241 EPEDKEMTLEEYEKLLEDKRKALMALKTEERKVDPKEFASMQQLSSKKENNDIFIKLGSE 300
           EPEDKEMTL+EYEK+LE+K+KAL +L T ERKVD K F SMQQLS+KK N++IFIKLGS+
Sbjct: 241 EPEDKEMTLDEYEKILEEKKKALQSLTTSERKVDTKVFESMQQLSNKKSNDEIFIKLGSD 300

Query: 301 KDKRKEIADKEERTKKSLSINEFLRPAEGERHYTPGGRGRGRGRGSRGGYGGSS-----I 358
           KDKRK+  DKEE+ KK++SINEFL+PAEG  +Y  GGRG GRGRG RG  G SS      
Sbjct: 301 KDKRKD--DKEEKAKKAVSINEFLKPAEGGNYYR-GGRG-GRGRGGRGRGGVSSGESGGY 353

[Close]

BLAST of CmoCh17G005030.1 vs. TAIR10
Match: AT4G17520.1 (AT4G17520.1 Hyaluronan / mRNA binding family)

HSP 1 Score: 253.4 bits (646), Expect = 4.4e-67
Identity = 190/383 (49.61%), Postives = 238/383 (62.14%), Query Frame = 1


Query: 1   MATVNPFDLLGDDDAEDPSQLIAAKQVAAVTAPPPKKGSAQTKPVVSPSQQNKPASLPSK 60
           MA+VNPFDLL DDDAEDPSQ++A+K +                 VV+P Q  K   +P+K
Sbjct: 1   MASVNPFDLL-DDDAEDPSQIVASKPLK----------------VVAPVQTAKSGKMPTK 60

Query: 61  PLPPSQAVREARNEGSRGGRGSGRGGGRGYGRGREGGGFNRDFANSENTSAPEDGEAGKT 120
           P PPSQAVREARN    GGRG+GRGG   YGRG  GG  NRD  N++  +       G  
Sbjct: 61  PPPPSQAVREARNAPG-GGRGAGRGGS--YGRGGRGGN-NRDSRNNDGPANENGYGGGYR 120

Query: 121 TERRGYGGPRG------RGGRRGGFNNG-EAGDGERPRRVFERHSGTGRGNENKREGAGR 180
               G G  RG      RG RRG ++NG ++GD ERPR+ ++RHS T  GNE+KR+GAGR
Sbjct: 121 RSEEGDGARRGGPVGGYRGDRRGSYSNGGDSGDSERPRKNYDRHSRTAYGNEDKRDGAGR 180

Query: 181 GNWGRPADEFAEVAEEAVNEPEKNVGDEKPVQEEDTSGVNSENPAKEPEETEPEDKEMTL 240
            NWG   D+   V EE+    +KN+  EK   E + +   +E PA++ EE +PEDKEMTL
Sbjct: 181 ANWGTTQDDITPVTEESTAVVDKNLTVEKQDGEGEATDAKNETPAEKAEE-KPEDKEMTL 240

Query: 241 EEYEKLLEDKRKALMALKTEERKVDPKEFASMQQLSSKKENND-IFIKLGSEKDKRKEIA 300
           EEYEK+LE+K+KAL A K EERKVD K F +MQQLSSKK NND +FIKLG+EKDKR  I 
Sbjct: 241 EEYEKVLEEKKKALQATKVEERKVDTKAFEAMQQLSSKKSNNDEVFIKLGTEKDKR--IT 300

Query: 301 DKEERTKKSLSINEFLRPAEGERHYTP-----GGR-------------GRGRGRGSRGGY 358
           ++EE+T+KSLSINEFL+PA+G+ +Y P     GGR             GR    G R   
Sbjct: 301 EREEKTRKSLSINEFLKPADGKSYYRPRGGYQGGREGRGPREGNQRDGGRNLREGGRNQR 359

[Close]

BLAST of CmoCh17G005030.1 vs. TAIR10
Match: AT5G47210.1 (AT5G47210.1 Hyaluronan / mRNA binding family)

HSP 1 Score: 226.5 bits (576), Expect = 5.7e-59
Identity = 187/379 (49.34%), Postives = 229/379 (60.42%), Query Frame = 1


Query: 1   MATVNPFDLLGDDDAEDPSQLIAAKQVAAVTAPPPKKGSAQTKPVVSPSQQNKPASLPSK 60
           MA++NPFDLLGDD AEDPSQL  A              S + +   +  Q  K A  P+K
Sbjct: 1   MASLNPFDLLGDD-AEDPSQLAVAL-------------SQKVEKAAAAVQPPKAAKFPTK 60

Query: 61  PLPPSQAVREARNEGSRGGRGSGRGGGRGYGRGREGGGFNRDFANSENTSAP--EDG--- 120
           P PPSQAVRE+RN   +GGRG G GG  G+ RGR  GG+NRD   + N  AP  E+G   
Sbjct: 61  PAPPSQAVRESRN-APQGGRG-GTGGRGGFSRGRGNGGYNRD---NRNNDAPGNENGFSG 120

Query: 121 -------EAGKTTERRGYGGPRGRGGR----RGGFNNGEAGDGERPRRVFERHSGTGRGN 180
                  +A   +     GG R  GGR    RGG  NGE+GD ERP R ++RHS TG G 
Sbjct: 121 GYRRPSEDADGASRGGSVGGYRVGGGREGPRRGGVANGESGDVERPPRNYDRHSRTGHGT 180

Query: 181 ENKREGAGRGNWGRPADEFAEVAEEAVNEPEKNVGDEKPVQEEDTSGVNSENPAKEPEET 240
             KR G GRGNWG   D+    +EE   E EK+   EK   E++T     E  A+E  + 
Sbjct: 181 GMKRNGGGRGNWGTTEDDIPPTSEEPTTEVEKSPVAEKQGGEDETPEAKKELTAEEKAQK 240

Query: 241 EPED---KEMTLEEYEKLLEDKRKALMALKTEERKVDPKEFASMQQLSSKKE-NNDIFIK 300
           E E+   +EMTLEEYEK+LE+K+KAL A K EERKVD K F SMQQLS+KK  + +IFIK
Sbjct: 241 EAEEAEAREMTLEEYEKILEEKKKALQATKVEERKVDTKVFESMQQLSNKKNTDEEIFIK 300

Query: 301 LGSEKDKRKEIADKEERTKKSLSINEFLRPAEGERHYTPGGRGRGR-GRGSRGGYGGSSI 358
           LGS+K+KRK   D  E+ KKSLSINEFL+PA+G+R+   GG  RGR GRG RG  G    
Sbjct: 301 LGSDKEKRK---DATEKAKKSLSINEFLKPADGKRYNGRGGGSRGRGGRGGRGEGGNQRY 357

[Close]

BLAST of CmoCh17G005030.1 vs. NCBI nr
Match: gi|659119706|ref|XP_008459799.1| (PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein-like [Cucumis melo])

HSP 1 Score: 569.7 bits (1467), Expect = 7.8e-159
Identity = 315/359 (87.74%), Postives = 332/359 (92.48%), Query Frame = 1


Query: 1   MATVNPFDLLGDDDAEDPSQLIAAKQVAAVTAPPPKKGSAQTKPVVSPSQQNKPASLPSK 60
           MAT+NPFDLLGDDDAEDPSQLIAAK  A  TAP  KKG AQTKP+ S +QQNKPASLPSK
Sbjct: 1   MATLNPFDLLGDDDAEDPSQLIAAKVAAVATAPLSKKGPAQTKPLPSGAQQNKPASLPSK 60

Query: 61  PLPPSQAVREARNEGSRGGRGSGRGGGRGYG--RGREGGGFNRDFANSENTSAPEDGEAG 120
           PLPP+QAVRE+RNEGSRGGRGSGRGGGRGYG  RGREGGGFNRD ANSEN +APEDG  G
Sbjct: 61  PLPPAQAVRESRNEGSRGGRGSGRGGGRGYGYGRGREGGGFNRDSANSENINAPEDGVGG 120

Query: 121 KTTERRGYGGPRGRGGRRGGFNNGEAGDGERPRRVFERHSGTGRGNENKREGAGRGNWGR 180
           KTTERRGYGGPRGRGGRRGGFN+GE  +GERPRR FERHSGTGRGNE KREG+GRGNWGR
Sbjct: 121 KTTERRGYGGPRGRGGRRGGFNDGENAEGERPRRAFERHSGTGRGNEFKREGSGRGNWGR 180

Query: 181 PADEFAEVAEEAVNEPEKNVGDEKPVQEEDTSGVNSENPAKEPEETEPEDKEMTLEEYEK 240
             DEFAEVAEE VNE EKNVGDEKP+QE DTSG N+++PAKEPEETEPEDKEMTLEEYEK
Sbjct: 181 STDEFAEVAEETVNETEKNVGDEKPIQENDTSGANTDDPAKEPEETEPEDKEMTLEEYEK 240

Query: 241 LLEDKRKALMALKTEERKVDPKEFASMQQLSSKKENNDIFIKLGSEKDKRKEIADKEERT 300
           LLEDKRK+L+ALKTEERKVDPKEFASMQQLSSKK+NNDIFIKLGSEKDKRKEIADKEERT
Sbjct: 241 LLEDKRKSLLALKTEERKVDPKEFASMQQLSSKKDNNDIFIKLGSEKDKRKEIADKEERT 300

Query: 301 KKSLSINEFLRPAEGERHYTPGGRGRGRGRGSRGGYGGSSISNVAAPSIEDPGQFPTLG 358
           KKSLSINEFLRPAEGERHYTPGGRGRGRGRGSRGGY GSS+SNVAAPSIEDPGQFP LG
Sbjct: 301 KKSLSINEFLRPAEGERHYTPGGRGRGRGRGSRGGYSGSSMSNVAAPSIEDPGQFPILG 359

[Close]

BLAST of CmoCh17G005030.1 vs. NCBI nr
Match: gi|449445497|ref|XP_004140509.1| (PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein-like [Cucumis sativus])

HSP 1 Score: 555.8 bits (1431), Expect = 1.2e-154
Identity = 307/359 (85.52%), Postives = 327/359 (91.09%), Query Frame = 1


Query: 1   MATVNPFDLLGDDDAEDPSQLIAAKQVAAVTAPPPKKGSAQTKPVVSPSQQNKPASLPSK 60
           M T+NPFDLLGDDDAEDPSQLIAAK  A  TAP  KK  AQTKP+ S +Q NKPASLPSK
Sbjct: 1   MTTLNPFDLLGDDDAEDPSQLIAAKVAAVATAPLSKKAPAQTKPLPSGAQLNKPASLPSK 60

Query: 61  PLPPSQAVREARNEGSRGGRGSGRGGGRGYG--RGREGGGFNRDFANSENTSAPEDGEAG 120
           PLPP+QAVRE+RNEGSRGGRGSGRGGGRGYG  RGREGGGFNRD  N+EN +APEDG  G
Sbjct: 61  PLPPAQAVRESRNEGSRGGRGSGRGGGRGYGYGRGREGGGFNRDSTNNENINAPEDGVGG 120

Query: 121 KTTERRGYGGPRGRGGRRGGFNNGEAGDGERPRRVFERHSGTGRGNENKREGAGRGNWGR 180
           KT+ERRGYGGPRGRGGRRGGFN+GE  +GERPRR FERHSGTGRGNE KREG+GRGNWGR
Sbjct: 121 KTSERRGYGGPRGRGGRRGGFNDGEGAEGERPRRAFERHSGTGRGNEFKREGSGRGNWGR 180

Query: 181 PADEFAEVAEEAVNEPEKNVGDEKPVQEEDTSGVNSENPAKEPEETEPEDKEMTLEEYEK 240
             DEFAEVA E VNE EKNVGDEKP+QE+DTSGVN+ENPAKEP+ETEPEDKEMTLEEYEK
Sbjct: 181 STDEFAEVAGETVNETEKNVGDEKPIQEDDTSGVNTENPAKEPQETEPEDKEMTLEEYEK 240

Query: 241 LLEDKRKALMALKTEERKVDPKEFASMQQLSSKKENNDIFIKLGSEKDKRKEIADKEERT 300
           LLEDKRKAL+ALKTEERKVDPKEFASMQQLSSKK+NNDIFIKLGSEKDKRKE+ADKEERT
Sbjct: 241 LLEDKRKALLALKTEERKVDPKEFASMQQLSSKKDNNDIFIKLGSEKDKRKEMADKEERT 300

Query: 301 KKSLSINEFLRPAEGERHYTPGGRGRGRGRGSRGGYGGSSISNVAAPSIEDPGQFPTLG 358
           KKSLSINEFLRPA+GERHY PGGRGRGRGRGSRGGY GS +SNVAAPSI DPGQFPTLG
Sbjct: 301 KKSLSINEFLRPADGERHYAPGGRGRGRGRGSRGGYSGSPMSNVAAPSIGDPGQFPTLG 359

[Close]

BLAST of CmoCh17G005030.1 vs. NCBI nr
Match: gi|659119708|ref|XP_008459800.1| (PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein-like [Cucumis melo])

HSP 1 Score: 486.9 bits (1252), Expect = 6.7e-134
Identity = 299/380 (78.68%), Postives = 319/380 (83.95%), Query Frame = 1


Query: 409 MATTNPFDLLGDDDAEDPSQLIAAKHAAVVLS-RKGSDHPQGKQ-AAAAAKQNKPANLPS 468
           MATTNPFDLLGDDDAEDPSQL+A K AA  ++ +KGSDHPQ KQ AAAAAK NKPANLPS
Sbjct: 1   MATTNPFDLLGDDDAEDPSQLMAVKQAAAAVAPKKGSDHPQAKQQAAAAAKLNKPANLPS 60

Query: 469 KPLPPAQAVREAKNEGGRGGRGSGRGGGGYGYGRGRGSGGFNREFPYNDYSFSSNPEDGE 528
           KPLPPAQAVREAKNEGGRGGRGSGRGGGG GYGRGRGSGGFNRE   N+YSFSSNPEDGE
Sbjct: 61  KPLPPAQAVREAKNEGGRGGRGSGRGGGGRGYGRGRGSGGFNREAANNEYSFSSNPEDGE 120

Query: 529 TGRTTEKRGGYGGPRGRGGRRGGFNNGEASDGERFRGAFERQSETGYGLFFNLEMTSSVK 588
           TGRTTEKRGGYGGPRGRGGRRGGF NG+  DGER RG FER S TG G  F  E      
Sbjct: 121 TGRTTEKRGGYGGPRGRGGRRGGFYNGDTDDGERPRGVFERHSGTGRGNEFKRE------ 180

Query: 589 DLGVGTGE-GQLTNFLSKGAEEVNETQKKVGDEKPVHED------DESSAKQLEEKEPED 648
             G G G  G+ T+   + AEE NE+Q K+GDEKPVHED       E++AK+ EEKEPED
Sbjct: 181 --GSGRGNWGRSTDEFPEVAEEANESQ-KLGDEKPVHEDGTAGVNTENTAKESEEKEPED 240

Query: 649 KEMTLEEYEKLKEEKRKALLALKTEERKVDPKEFASMQQLSSKKDNQDVFIKLGSDKDKR 708
           KEMTLEEYEKL EEKRK+LLALKTEERKVDPKEFAS+QQLSSKK+NQDVFIKLGSDKDKR
Sbjct: 241 KEMTLEEYEKLLEEKRKSLLALKTEERKVDPKEFASLQQLSSKKENQDVFIKLGSDKDKR 300

Query: 709 KEIADKEERTKKSLSINEFLKPAEGERHYMPGGRGRGRGRG-RGSRGGYVGSSMNSSMSS 768
           KEIADKEERTKKS+SINEFLKPA+GERHY PGGRGRGRGRG RG  GGYV    +SSMSS
Sbjct: 301 KEIADKEERTKKSVSINEFLKPADGERHYTPGGRGRGRGRGSRG--GGYV----SSSMSS 360

Query: 769 NVAAAPSIEDPGQFPTLGAK 779
           NV AAPSIEDPGQFPTLGAK
Sbjct: 361 NV-AAPSIEDPGQFPTLGAK 364

[Close]

BLAST of CmoCh17G005030.1 vs. NCBI nr
Match: gi|449466564|ref|XP_004150996.1| (PREDICTED: cyclin-dependent kinase 13-like [Cucumis sativus])

HSP 1 Score: 476.1 bits (1224), Expect = 1.2e-130
Identity = 295/379 (77.84%), Postives = 314/379 (82.85%), Query Frame = 1


Query: 409 MATTNPFDLLGDDDAEDPSQLIAAKHAAVVLSRKGSDHPQGKQ-AAAAAKQNKPANLPSK 468
           MATTNPFDLLGDDDAEDPSQL+A K AA    +KGSDHPQ KQ AAAAAK +KPANLPSK
Sbjct: 1   MATTNPFDLLGDDDAEDPSQLMAVKQAAAA-PKKGSDHPQAKQQAAAAAKLSKPANLPSK 60

Query: 469 PLPPAQAVREAKNEGGRGGRGSGRGGGGYGYGRGRGSGGFNREFPYNDYSFSSNPEDGET 528
           PLPPAQAVREAKNEGGRGGR SGR  GG GYGRGRGSGGFNRE P N+YSFSSNPEDGET
Sbjct: 61  PLPPAQAVREAKNEGGRGGRSSGR--GGRGYGRGRGSGGFNRESPNNEYSFSSNPEDGET 120

Query: 529 GRTTEKRGGYGGPRGRGGRRGGFNNGEASDGERFRGAFERQSETGYGLFFNLEMTSSVKD 588
           GRTTEKRGGYGGPRGRGGRRGGF NG+ +DGER RGAFER S TG G  F  E       
Sbjct: 121 GRTTEKRGGYGGPRGRGGRRGGFYNGDTADGERPRGAFERHSGTGRGNEFKRE------- 180

Query: 589 LGVGTGE-GQLTNFLSKGAEEVNETQKKVGDEKPVHEDD------ESSAKQLEEKEPEDK 648
            G G G  G+      + AEE NE+Q K+GDEKPVHEDD      E+ AK+ EEKEPEDK
Sbjct: 181 -GSGRGNWGRSAEEFPEVAEEANESQ-KLGDEKPVHEDDTAGVNTENPAKESEEKEPEDK 240

Query: 649 EMTLEEYEKLKEEKRKALLALKTEERKVDPKEFASMQQLSSKKDNQDVFIKLGSDKDKRK 708
           EMTLEEYEKL +EKRK+LLALKTEERKVDPKEFAS+QQLSSKK+NQD+FIKLGSDKDKRK
Sbjct: 241 EMTLEEYEKLLDEKRKSLLALKTEERKVDPKEFASLQQLSSKKENQDIFIKLGSDKDKRK 300

Query: 709 EIADKEERTKKSLSINEFLKPAEGERHYMPGGRGRGRGRG-RGSRGGYVGSSMNSSMSSN 768
           E ADKEERTKKS+SINEFLKPAEGE+HY PGGRGRGRGRG RG  GGYVG    SSMSSN
Sbjct: 301 ETADKEERTKKSVSINEFLKPAEGEKHYTPGGRGRGRGRGSRG--GGYVG----SSMSSN 360

Query: 769 VAAAPSIEDPGQFPTLGAK 779
           V AAPSIEDPGQFPTLGAK
Sbjct: 361 V-AAPSIEDPGQFPTLGAK 360

[Close]

BLAST of CmoCh17G005030.1 vs. NCBI nr
Match: gi|731420480|ref|XP_010661405.1| (PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein [Vitis vinifera])

HSP 1 Score: 441.0 bits (1133), Expect = 4.2e-120
Identity = 264/370 (71.35%), Postives = 299/370 (80.81%), Query Frame = 1


Query: 1   MATVNPFDLLGDDDAEDPSQLIAAKQVAAVTAPPPKKGSAQTKPVVSPSQQNKPASLPSK 60
           MAT+NPFDLLGDDD+EDPSQLIAA+++       PKK  A T+   +P+QQ KPA LPSK
Sbjct: 1   MATMNPFDLLGDDDSEDPSQLIAAQKIV------PKKALAPTQ-AAAPAQQAKPAKLPSK 60

Query: 61  PLPPSQAVREARNEGSRGGRGSGRGGGRGYGRGREGGGFNRDFANSENT----------S 120
           P+PP+QAVRE +NE  RGG   GRGG RGYGRGR GGGFNRD+AN+EN+           
Sbjct: 61  PVPPAQAVREGKNESGRGG---GRGG-RGYGRGRGGGGFNRDYANNENSFSNMGVAGGQG 120

Query: 121 APEDGEAGKTTERRGYGGPRGR-GGRRGGFNNGEAGDGERPRRVFERHSGTGRGNENKRE 180
           APEDGE GK +ERR YGGPR    GRRGGF+NGEAGDG+RPRR FER SGTGRGNE KRE
Sbjct: 121 APEDGEGGKPSERRNYGGPRPPFRGRRGGFSNGEAGDGDRPRRAFERRSGTGRGNELKRE 180

Query: 181 GAGRGNWGRPADEFAEVAEEAVNEPEKNVGDEKPVQEEDTSGVNSENPAKEPEETEPEDK 240
           G+GRGNWG   DE + V EE VNE EKN+G EKPV EED +  N ENP  EPEE EPE+K
Sbjct: 181 GSGRGNWGTETDELSGVTEEVVNEGEKNLGAEKPVGEEDVADGNKENPVNEPEEKEPEEK 240

Query: 241 EMTLEEYEKLLEDKRKALMALKTEERKVD-PKEFASMQQLSSKKENNDIFIKLGSEKDKR 300
           EMTLEEYEK+LE++RKAL  LKTEERKVD  KEF SMQQLSSKK N+DIFIKLGS+KDKR
Sbjct: 241 EMTLEEYEKVLEERRKALQTLKTEERKVDVDKEFKSMQQLSSKKGNDDIFIKLGSDKDKR 300

Query: 301 KEIADKEERTKKSLSINEFLRPAEGERHYTPGGRGRGRGRGSRGGY-GGSSISNVAAPSI 358
           KE A+KEER KK++SINEFL+PAEGER Y+PGGRGRGRGRGSRGGY GG+++SNVAAPSI
Sbjct: 301 KEAAEKEERAKKAVSINEFLKPAEGERFYSPGGRGRGRGRGSRGGYGGGNAMSNVAAPSI 359

The following BLAST results are available for this feature:

BLAST of CmoCh17G005030.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh17G005030.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K9Z4_CUCSA	8.1e-155	85.52	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G106180 PE=4 SV=1	[more]
A0A0A0KCI2_CUCSA	8.2e-131	77.84	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G105680 PE=4 SV=1	[more]
D7SLZ5_VITVI	2.9e-120	71.35	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0021g01420 PE=4 SV=...	[more]
A0A0L9VU54_PHAAN	1.5e-116	69.84	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan11g165500 PE=4 SV=1	[more]
A0A0S3SVR0_PHAAN	1.5e-116	69.84	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.09G013200 PE=...	[more]

BLAST of CmoCh17G005030.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G16830.1	3.1e-73	55.03	Hyaluronan / mRNA binding family	[more]
AT4G17520.1	4.4e-67	49.61	Hyaluronan / mRNA binding family	[more]
AT5G47210.1	5.7e-59	49.34	Hyaluronan / mRNA binding family	[more]

BLAST of CmoCh17G005030.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659119706\|ref\|XP_008459799.1\|	7.8e-159	87.74	PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein-like [Cucumis m...	[more]
gi\|449445497\|ref\|XP_004140509.1\|	1.2e-154	85.52	PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein-like [Cucumis s...	[more]
gi\|659119708\|ref\|XP_008459800.1\|	6.7e-134	78.68	PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein-like [Cucumis m...	[more]
gi\|449466564\|ref\|XP_004150996.1\|	1.2e-130	77.84	PREDICTED: cyclin-dependent kinase 13-like [Cucumis sativus]	[more]
gi\|731420480\|ref\|XP_010661405.1\|	4.2e-120	71.35	PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein [Vitis vinifera...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR006861	HABP4_PAIRBP1-bd
IPR019084	Stm1-like_N

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh17G005030	CmoCh17G005030	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh17G005030.1	CmoCh17G005030.1-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh17G005030.1.three_prime_UTR.1	CmoCh17G005030.1.three_prime_UTR.1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh17G005030.1.CDS.15	CmoCh17G005030.1.CDS.15	CDS
CmoCh17G005030.1.CDS.14	CmoCh17G005030.1.CDS.14	CDS
CmoCh17G005030.1.CDS.13	CmoCh17G005030.1.CDS.13	CDS
CmoCh17G005030.1.CDS.12	CmoCh17G005030.1.CDS.12	CDS
CmoCh17G005030.1.CDS.11	CmoCh17G005030.1.CDS.11	CDS
CmoCh17G005030.1.CDS.10	CmoCh17G005030.1.CDS.10	CDS
CmoCh17G005030.1.CDS.9	CmoCh17G005030.1.CDS.9	CDS
CmoCh17G005030.1.CDS.8	CmoCh17G005030.1.CDS.8	CDS
CmoCh17G005030.1.CDS.7	CmoCh17G005030.1.CDS.7	CDS
CmoCh17G005030.1.CDS.6	CmoCh17G005030.1.CDS.6	CDS
CmoCh17G005030.1.CDS.5	CmoCh17G005030.1.CDS.5	CDS
CmoCh17G005030.1.CDS.4	CmoCh17G005030.1.CDS.4	CDS
CmoCh17G005030.1.CDS.3	CmoCh17G005030.1.CDS.3	CDS
CmoCh17G005030.1.CDS.2	CmoCh17G005030.1.CDS.2	CDS
CmoCh17G005030.1.CDS.1	CmoCh17G005030.1.CDS.1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh17G005030.1.five_prime_UTR.1	CmoCh17G005030.1.five_prime_UTR.1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh17G005030.1.exon.15	CmoCh17G005030.1.exon.15	exon
CmoCh17G005030.1.exon.14	CmoCh17G005030.1.exon.14	exon
CmoCh17G005030.1.exon.13	CmoCh17G005030.1.exon.13	exon
CmoCh17G005030.1.exon.12	CmoCh17G005030.1.exon.12	exon
CmoCh17G005030.1.exon.11	CmoCh17G005030.1.exon.11	exon
CmoCh17G005030.1.exon.10	CmoCh17G005030.1.exon.10	exon
CmoCh17G005030.1.exon.9	CmoCh17G005030.1.exon.9	exon
CmoCh17G005030.1.exon.8	CmoCh17G005030.1.exon.8	exon
CmoCh17G005030.1.exon.7	CmoCh17G005030.1.exon.7	exon
CmoCh17G005030.1.exon.6	CmoCh17G005030.1.exon.6	exon
CmoCh17G005030.1.exon.5	CmoCh17G005030.1.exon.5	exon
CmoCh17G005030.1.exon.4	CmoCh17G005030.1.exon.4	exon
CmoCh17G005030.1.exon.3	CmoCh17G005030.1.exon.3	exon
CmoCh17G005030.1.exon.2	CmoCh17G005030.1.exon.2	exon
CmoCh17G005030.1.exon.1	CmoCh17G005030.1.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006861	Hyaluronan/mRNA-binding protein	PFAM	PF04774	HABP4_PAI-RBP1	coord: 150..257 score: 5.7E-28coord: 591..668 score: 2.9
IPR006861	Hyaluronan/mRNA-binding protein	SMART	SM01233	HABP4_PAI_RBP1_2	coord: 150..258 score: 1.3E-35coord: 562..669 score: 1.
IPR019084	Stm1, N-terminal	PFAM	PF09598	Stm1_N	coord: 409..488 score: 2.7E-21coord: 1..81 score: 4.0
None	No IPR available	unknown	Coil	Coil	coord: 640..667 score: -coord: 233..256 scor
None	No IPR available	PANTHER	PTHR12299	HYALURONIC ACID-BINDING PROTEIN 4	coord: 743..778 score: 1.3E-181coord: 1..333 score: 1.3E
None	No IPR available	PANTHER	PTHR12299:SF24	SUBFAMILY NOT NAMED	coord: 743..778 score: 1.3E-181coord: 1..333 score: 1.3E