CmoCh17G000150.1 (mRNA) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh17G000150.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	AP2-like ethylene-responsive transcription factor SNZ, putative
Location	Cmo_Chr17 : 73682 .. 74215 (+)
Sequence length	534

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGGCATGGCAGAAGGAGCAGCAGCACCTTCATTGCCCGACCTTGTACTCTCGCTCGAGCAAGCATCGTTCATGGCCAAGCAGCTTTCTTCTACCTCTAACCCAGCCCATCTCCTCCAAATCTACAATTCTCTCCACCAGGCCAACCTCAACCTCTCCGTTTTCCTCTCTACACCTCACTACCCCCAATCTCTTCCTCTTCCTCCCCCTTCCATCAACGATAATCTCCTCTCCTCTGCAACCAGCGCCGCCTTCAACGACAGCGGCAACGAGCCGATGCAGGTCGGCGATGACGAAGATGCCGATGCCGAGCAGAATTCCAAGGGCACGATTGAAATGGTTGAGGAGAAGATGAAGGATTGTTTTATTAAGAACAAGCGGGTTAAACGAAAGCTATCGCCGTCGGCCGCGGCTATGGCGGAGGAAAGGCGAGTACATCGTGATAATCGGTTTAGTGCGACGGCGAAGGGTTTCGATCCTCATGTTGAGAGATTGCGGGCCTTGGACCTGATTTCCCAGTTTCATGCGTGA

mRNA sequence

ATGGAAGGCATGGCAGAAGGAGCAGCAGCACCTTCATTGCCCGACCTTGTACTCTCGCTCGAGCAAGCATCGTTCATGGCCAAGCAGCTTTCTTCTACCTCTAACCCAGCCCATCTCCTCCAAATCTACAATTCTCTCCACCAGGCCAACCTCAACCTCTCCGTTTTCCTCTCTACACCTCACTACCCCCAATCTCTTCCTCTTCCTCCCCCTTCCATCAACGATAATCTCCTCTCCTCTGCAACCAGCGCCGCCTTCAACGACAGCGGCAACGAGCCGATGCAGGTCGGCGATGACGAAGATGCCGATGCCGAGCAGAATTCCAAGGGCACGATTGAAATGGTTGAGGAGAAGATGAAGGATTGTTTTATTAAGAACAAGCGGGTTAAACGAAAGCTATCGCCGTCGGCCGCGGCTATGGCGGAGGAAAGGCGAGTACATCGTGATAATCGGTTTAGTGCGACGGCGAAGGGTTTCGATCCTCATGTTGAGAGATTGCGGGCCTTGGACCTGATTTCCCAGTTTCATGCGTGA

Coding sequence (CDS)

ATGGAAGGCATGGCAGAAGGAGCAGCAGCACCTTCATTGCCCGACCTTGTACTCTCGCTCGAGCAAGCATCGTTCATGGCCAAGCAGCTTTCTTCTACCTCTAACCCAGCCCATCTCCTCCAAATCTACAATTCTCTCCACCAGGCCAACCTCAACCTCTCCGTTTTCCTCTCTACACCTCACTACCCCCAATCTCTTCCTCTTCCTCCCCCTTCCATCAACGATAATCTCCTCTCCTCTGCAACCAGCGCCGCCTTCAACGACAGCGGCAACGAGCCGATGCAGGTCGGCGATGACGAAGATGCCGATGCCGAGCAGAATTCCAAGGGCACGATTGAAATGGTTGAGGAGAAGATGAAGGATTGTTTTATTAAGAACAAGCGGGTTAAACGAAAGCTATCGCCGTCGGCCGCGGCTATGGCGGAGGAAAGGCGAGTACATCGTGATAATCGGTTTAGTGCGACGGCGAAGGGTTTCGATCCTCATGTTGAGAGATTGCGGGCCTTGGACCTGATTTCCCAGTTTCATGCGTGA

Homology

[Close]

BLAST of CmoCh17G000150.1 vs. TrEMBL
Match: A0A0A0KBH1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G074570 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 4.1e-70
Identity = 148/181 (81.77%), Postives = 158/181 (87.29%), Query Frame = 1


Query: 1   MEGMAEGAAAPSLPDLVLSLEQASFMAKQLSSTSNPAHLLQIYNSLHQANLNLSVFLSTP 60
           ME MA+G A PSL DL+LSL+QA+FMAKQL STSNP HLLQIYNSLHQANLNLS+FLST 
Sbjct: 1   MEAMADGTAPPSLSDLLLSLDQATFMAKQLPSTSNPTHLLQIYNSLHQANLNLSLFLSTT 60

Query: 61  HYPQSLPLP----PPSINDNLLSSATSAAFNDSGNEPMQVGDDEDADAEQNSKGTIEMVE 120
           H PQSLPLP    PPSIN+  LSSATSAAF     +PMQVGDD+DADA QNSKGTIEMVE
Sbjct: 61  HLPQSLPLPLPLPPPSINETSLSSATSAAF-----DPMQVGDDDDADAHQNSKGTIEMVE 120

Query: 121 EKMKDCFIKNKRVKRKLSPSAAAMAEERRVHRDNRFSATAKGFDPHVERLRALDLISQFH 178
           EKMKDCFIKNKRVKR+LSPSAAAMAEERRVH  NRF+AT KGFDPHVERLRALDLISQFH
Sbjct: 121 EKMKDCFIKNKRVKRQLSPSAAAMAEERRVHPHNRFTATPKGFDPHVERLRALDLISQFH 176

[Close]

BLAST of CmoCh17G000150.1 vs. TrEMBL
Match: A0A0D2MYU7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G156400 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 2.9e-39
Identity = 105/170 (61.76%), Postives = 132/170 (77.65%), Query Frame = 1


Query: 8   AAAPSLPDLVLSLEQASFMAKQLSSTSNPAHLLQIYNSLHQANLNLSVFLSTPHYPQSLP 67
           AAA  L DLV SLEQA+ MAKQL  TS+P +L QI++SLH+A+ +LS FLS  H PQ LP
Sbjct: 17  AAAVQLTDLVYSLEQATQMAKQLPVTSDPTYLFQIHSSLHRAHHSLSSFLSAAH-PQHLP 76

Query: 68  LPPPSINDNLLSSATSAAFNDSGNEPMQVGDDEDADAEQNSKGTIEMVEEKMKDC-FIKN 127
             PP    N LSSAT AA N++G++PMQVGD+ +A+AE+NSK +I+ VEE+M++C FIKN
Sbjct: 77  --PPVAAANSLSSATGAA-NENGSDPMQVGDENEAEAEENSKTSIDKVEERMRECFFIKN 136

Query: 128 KRVKRKLSPSAAAMAEERRVHRDNRFSATAKGFDPHVERLRALDLISQFH 177
           KRVKR+LSPS+AA+AEERRV  D+RF     GFDP  E+LRALDL+ QFH
Sbjct: 137 KRVKRQLSPSSAALAEERRV-CDDRFVGGIMGFDPIGEKLRALDLVYQFH 181

[Close]

BLAST of CmoCh17G000150.1 vs. TrEMBL
Match: B9IC74_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s07300g PE=4 SV=2)

HSP 1 Score: 169.5 bits (428), Expect = 3.7e-39
Identity = 101/165 (61.21%), Postives = 121/165 (73.33%), Query Frame = 1


Query: 13  LPDLVLSLEQASFMAKQLSSTSNPAHLLQIYNSLHQANLNLSVFLSTPHYPQSLPLPPPS 72
           LPDL+LSLEQA+ MAKQL ST++P HLLQIY+SLHQA+ +LS  LS    P S PLPPP 
Sbjct: 10  LPDLILSLEQAALMAKQLPSTTDPNHLLQIYSSLHQAHQHLSSILSQNQLP-SFPLPPPP 69

Query: 73  I-NDNLLSSATSAAFNDSGNEPMQVGDDEDADAEQNSKGTIEMVEEKMKDCFIKNKRVKR 132
              +N LSSAT A  +++GNEPMQVGDD+D +   N   +I+ VE +M+DCFIKNKR KR
Sbjct: 70  PPQENSLSSATGA--DENGNEPMQVGDDDDYEENSNKVVSIDKVEVRMRDCFIKNKRPKR 129

Query: 133 KLSPSAAAMAEERRVHRDNRFSATAKGFDPHVERLRALDLISQFH 177
            LSPS  A+AEERR+  D+ F     GFDPH  RLRALDLI QFH
Sbjct: 130 PLSPSTVAVAEERRLS-DDGFRGGIMGFDPHGTRLRALDLIYQFH 170

[Close]

BLAST of CmoCh17G000150.1 vs. TrEMBL
Match: B9GPU3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s15440g PE=4 SV=2)

HSP 1 Score: 167.2 bits (422), Expect = 1.9e-38
Identity = 100/166 (60.24%), Postives = 122/166 (73.49%), Query Frame = 1


Query: 11  PSLPDLVLSLEQASFMAKQLSSTSNPAHLLQIYNSLHQANLNLSVFLSTPHYPQSLPLPP 70
           P LPDL+LSLEQA+ MAKQL ST++P HLLQIY+SLH A+ +LS FLS  H   S PL P
Sbjct: 9   PPLPDLILSLEQATLMAKQLPSTTDPTHLLQIYSSLHHAHHHLSSFLSQNHQLPSFPLQP 68

Query: 71  PSINDNLLSSATSAAFNDSGNEPMQVGDDEDADAEQNSKGTIEMVEEKMKDCFIKNKRVK 130
           P   +N LSSAT A  +++G+EPMQVGDD++ ++  N   +IE VEE M+DCFIKNKR K
Sbjct: 69  PP-QENSLSSATGA--DENGDEPMQVGDDDEENS--NKVVSIEKVEEGMRDCFIKNKRPK 128

Query: 131 RKLSPSAAAMAEERRVHRDNRFSATAKGFDPHVERLRALDLISQFH 177
           R LSPS  A+AEERR++ D+ F     GFDP   RLRALDLI QFH
Sbjct: 129 RPLSPSTVAVAEERRLY-DDGFGGGIVGFDPRETRLRALDLIYQFH 168

[Close]

BLAST of CmoCh17G000150.1 vs. TrEMBL
Match: M5XDX1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012427mg PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 9.2e-38
Identity = 100/172 (58.14%), Postives = 122/172 (70.93%), Query Frame = 1


Query: 11  PSLPDLVLSLEQASFMAKQLSSTSNPAHLLQIYNSLHQANLNLSVFLSTPHYPQSLPLPP 70
           P L DL+LSLEQA+ MAKQL + S+P +LL IY+SLHQA+ +LS FLSTP +PQ  P   
Sbjct: 13  PPLADLILSLEQATHMAKQLPTISDPTYLLHIYSSLHQAHHHLSNFLSTPQFPQLQP--- 72

Query: 71  PSINDNLLSSATSAAFNDSGNEPMQVGDDEDAD-----AEQNSK-GTIEMVEEKMKDCFI 130
                N LSSAT       GNEPMQVGD ED D      E NS+  TI+MVEE+M+DCFI
Sbjct: 73  ----QNSLSSAT-------GNEPMQVGDGEDDDFDDGVGEGNSRDATIDMVEEQMRDCFI 132

Query: 131 KNKRVKRKLSPSAAAMAEERRVHRDNRFSATAKGFDPHVERLRALDLISQFH 177
           KNKR KR+LSPSAAA+ E+RR++ D  F  + KGFDPH  +LRAL+L+ QFH
Sbjct: 133 KNKRPKRRLSPSAAAVVEDRRLNGDG-FVGSVKGFDPHESKLRALELVYQFH 169

[Close]

BLAST of CmoCh17G000150.1 vs. TAIR10
Match: AT1G01840.1 (AT1G01840.1 unknown protein)

HSP 1 Score: 95.1 bits (235), Expect = 4.5e-20
Identity = 74/176 (42.05%), Postives = 100/176 (56.82%), Query Frame = 1


Query: 8   AAAPSLPDLVLSLEQASFMAKQLSSTSNPAHLLQIYNSLHQANLNLSVFLSTPHYPQSLP 67
           A+   + +L+ SLEQA+ MA+Q+ +T     LLQI +SL  A+  LS FL+      S+P
Sbjct: 2   ASIEQVAELISSLEQATLMAQQIGTTVGQNQLLQI-SSLRIAHQRLSAFLA------SIP 61

Query: 68  LPPPSINDNLLSSATSAAFNDSGNEPMQVGDDEDADAE---QNSKGTIEMVEEKMKDCFI 127
                           A  + S  EPMQ+G++E  +AE   +     IE VEEKM++CFI
Sbjct: 62  -------------TAEAEKSFSSVEPMQLGEEEKGEAEPAEEERYSAIEKVEEKMRECFI 121

Query: 128 KNKRVKRKLSPSAAAM---AEERRVHRDNRFSATAKGFDPHVERLRALDLISQFHA 178
           +NKR+KR LSPS+A +   A E R  RD  F +     DPH  +LRALDLI QFHA
Sbjct: 122 RNKRLKRPLSPSSAVVETSATEERSGRDYGFDS-----DPHATKLRALDLIYQFHA 152

[Close]

BLAST of CmoCh17G000150.1 vs. NCBI nr
Match: gi|659120382|ref|XP_008460165.1| (PREDICTED: uncharacterized protein LOC103499058 [Cucumis melo])

HSP 1 Score: 275.8 bits (704), Expect = 5.3e-71
Identity = 148/177 (83.62%), Postives = 157/177 (88.70%), Query Frame = 1


Query: 1   MEGMAEGAAAPSLPDLVLSLEQASFMAKQLSSTSNPAHLLQIYNSLHQANLNLSVFLSTP 60
           ME MAEG A PSL DL+ SL+QA+FMAKQL STSNP HLLQIYNSLHQANLNLS+FLST 
Sbjct: 1   MEPMAEGTAPPSLSDLLHSLDQATFMAKQLPSTSNPTHLLQIYNSLHQANLNLSLFLSTT 60

Query: 61  HYPQSLPLPPPSINDNLLSSATSAAFNDSGNEPMQVGDDEDADAEQNSKGTIEMVEEKMK 120
           H PQSLPLPPPSIN+  LSSATSAAF     +PMQVGDD+DADA QNSKGTIEMVEEKMK
Sbjct: 61  HLPQSLPLPPPSINETSLSSATSAAF-----DPMQVGDDDDADAHQNSKGTIEMVEEKMK 120

Query: 121 DCFIKNKRVKRKLSPSAAAMAEERRVHRDNRFSATAKGFDPHVERLRALDLISQFHA 178
           DCFIKNKRVKR+LSPSAAAMAEERRVH  NRF+AT KGFDPHVERLRALDLISQFHA
Sbjct: 121 DCFIKNKRVKRQLSPSAAAMAEERRVHPHNRFTATPKGFDPHVERLRALDLISQFHA 172

[Close]

BLAST of CmoCh17G000150.1 vs. NCBI nr
Match: gi|778711061|ref|XP_011656677.1| (PREDICTED: uncharacterized protein LOC105435764 [Cucumis sativus])

HSP 1 Score: 272.3 bits (695), Expect = 5.9e-70
Identity = 148/181 (81.77%), Postives = 158/181 (87.29%), Query Frame = 1


Query: 1   MEGMAEGAAAPSLPDLVLSLEQASFMAKQLSSTSNPAHLLQIYNSLHQANLNLSVFLSTP 60
           ME MA+G A PSL DL+LSL+QA+FMAKQL STSNP HLLQIYNSLHQANLNLS+FLST 
Sbjct: 1   MEAMADGTAPPSLSDLLLSLDQATFMAKQLPSTSNPTHLLQIYNSLHQANLNLSLFLSTT 60

Query: 61  HYPQSLPLP----PPSINDNLLSSATSAAFNDSGNEPMQVGDDEDADAEQNSKGTIEMVE 120
           H PQSLPLP    PPSIN+  LSSATSAAF     +PMQVGDD+DADA QNSKGTIEMVE
Sbjct: 61  HLPQSLPLPLPLPPPSINETSLSSATSAAF-----DPMQVGDDDDADAHQNSKGTIEMVE 120

Query: 121 EKMKDCFIKNKRVKRKLSPSAAAMAEERRVHRDNRFSATAKGFDPHVERLRALDLISQFH 178
           EKMKDCFIKNKRVKR+LSPSAAAMAEERRVH  NRF+AT KGFDPHVERLRALDLISQFH
Sbjct: 121 EKMKDCFIKNKRVKRQLSPSAAAMAEERRVHPHNRFTATPKGFDPHVERLRALDLISQFH 176

[Close]

BLAST of CmoCh17G000150.1 vs. NCBI nr
Match: gi|1009162260|ref|XP_015899342.1| (PREDICTED: uncharacterized protein LOC107432670 [Ziziphus jujuba])

HSP 1 Score: 180.6 bits (457), Expect = 2.3e-42
Identity = 113/184 (61.41%), Postives = 134/184 (72.83%), Query Frame = 1


Query: 1   MEGMAEGAAA-PSLPDLVLSLEQASFMAKQLSSTSNPAHLLQIYNSLHQANLNLSVFLS- 60
           ME MAE  A  P LP+L+LSLEQA+ MAKQL +T++P H  QIY+SLHQ + +LS FLS 
Sbjct: 1   MESMAEAQAVNPPLPELILSLEQAALMAKQLPTTTDPTHHFQIYSSLHQTHHHLSTFLSR 60

Query: 61  -TPHYPQSLPLPPPSINDNLLSSATSA-AFNDSGNEPMQVGDD---EDADAEQNSKG-TI 120
            TP +PQ L L PP+  +N LSSAT A A  D+GNEPMQVGDD   +D   E NSKG T+
Sbjct: 61  TTPLFPQPLHLAPPA--ENSLSSATGAVAGGDNGNEPMQVGDDNGYDDDVGEGNSKGNTV 120

Query: 121 EMVEEKMKDCFIKNKRVKRKLSPSAAAMAEERRVHRDNRFSATAKGFDPHVERLRALDLI 177
           + VEEKMKDCFIKNKR KR LSPSAAA+ EERR++ D  F     GFDPH  RL+ALDL+
Sbjct: 121 DRVEEKMKDCFIKNKRPKRPLSPSAAALVEERRLN-DGGFIGGFMGFDPHATRLKALDLV 180

[Close]

BLAST of CmoCh17G000150.1 vs. NCBI nr
Match: gi|743829184|ref|XP_011023446.1| (PREDICTED: uncharacterized protein LOC105124927 [Populus euphratica])

HSP 1 Score: 171.8 bits (434), Expect = 1.1e-39
Identity = 102/169 (60.36%), Postives = 126/169 (74.56%), Query Frame = 1


Query: 8   AAAPSLPDLVLSLEQASFMAKQLSSTSNPAHLLQIYNSLHQANLNLSVFLSTPHYPQSLP 67
           +A P LPDL+LSLEQA+ MAKQL ST++P HLLQIY+SLHQA+ +LS FLS  H   S P
Sbjct: 6   SAPPPLPDLILSLEQATLMAKQLPSTTDPTHLLQIYSSLHQAHHHLSSFLSQNHQLPSFP 65

Query: 68  LPPPSINDNLLSSATSAAFNDSGNEPMQVGDDEDADAEQNSKGTIEMVEEKMKDCFIKNK 127
           L PP   +N LSSAT A  +++G+EPMQVGDD++ ++  N   +IE VEE+M+DCFIKNK
Sbjct: 66  LQPPP-QENSLSSATGA--DENGDEPMQVGDDDEENS--NKVVSIEKVEERMRDCFIKNK 125

Query: 128 RVKRKLSPSAAAMAEERRVHRDNRFSATAKGFDPHVERLRALDLISQFH 177
           R KR LSPS  A+AEERR++ D+ F     GFDP   RLRALDLI QFH
Sbjct: 126 RPKRPLSPSTVAVAEERRMY-DDGFGGGIVGFDPRETRLRALDLIYQFH 168

[Close]

BLAST of CmoCh17G000150.1 vs. NCBI nr
Match: gi|1012118075|ref|XP_015961636.1| (PREDICTED: uncharacterized protein LOC107485611 [Arachis duranensis])

HSP 1 Score: 171.0 bits (432), Expect = 1.8e-39
Identity = 101/175 (57.71%), Postives = 120/175 (68.57%), Query Frame = 1


Query: 11  PSLPDLVLSLEQASFMAKQLSSTSNPAHLLQIYNSLHQANLNLSVFLSTPHYPQSLPLPP 70
           P LP+L+ SLEQA+FMAKQL ST+NP+HLLQI+ SLH A+ NLS FLST  +P   P PP
Sbjct: 18  PPLPELIHSLEQATFMAKQLQSTTNPSHLLQIHTSLHHAHQNLSTFLSTLQFPP--PPPP 77

Query: 71  PSINDNLLSSATSAAFNDSGNEPMQVGDDEDA---------DAEQNSKGTIEMVEEKMKD 130
           P   +N +SSA  AA      EPMQ+GDD+           DAE+ SK TIE VEEKM+D
Sbjct: 78  PPAAENSVSSANGAA-----GEPMQMGDDDGGGGNGDDGVVDAEETSKCTIEKVEEKMRD 137

Query: 131 CFIKNKRVKRKLSPSAAAMAEERRVHRDNRFSATAKGFDPHVERLRALDLISQFH 177
           CFIKNKR KR LSPSAAA  EE+R+  D  F    K +DPH  +LRALDL+ QFH
Sbjct: 138 CFIKNKRAKRPLSPSAAAAIEEKRLS-DEGFVGRVKDYDPHAMKLRALDLVYQFH 184

The following BLAST results are available for this feature:

BLAST of CmoCh17G000150.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh17G000150.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KBH1_CUCSA	4.1e-70	81.77	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G074570 PE=4 SV=1	[more]
A0A0D2MYU7_GOSRA	2.9e-39	61.76	Uncharacterized protein OS=Gossypium raimondii GN=B456_004G156400 PE=4 SV=1	[more]
B9IC74_POPTR	3.7e-39	61.21	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s07300g PE=4 SV=2	[more]
B9GPU3_POPTR	1.9e-38	60.24	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s15440g PE=4 SV=2	[more]
M5XDX1_PRUPE	9.2e-38	58.14	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012427mg PE=4 SV=1	[more]

BLAST of CmoCh17G000150.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G01840.1	4.5e-20	42.05	unknown protein	[more]

BLAST of CmoCh17G000150.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659120382\|ref\|XP_008460165.1\|	5.3e-71	83.62	PREDICTED: uncharacterized protein LOC103499058 [Cucumis melo]	[more]
gi\|778711061\|ref\|XP_011656677.1\|	5.9e-70	81.77	PREDICTED: uncharacterized protein LOC105435764 [Cucumis sativus]	[more]
gi\|1009162260\|ref\|XP_015899342.1\|	2.3e-42	61.41	PREDICTED: uncharacterized protein LOC107432670 [Ziziphus jujuba]	[more]
gi\|743829184\|ref\|XP_011023446.1\|	1.1e-39	60.36	PREDICTED: uncharacterized protein LOC105124927 [Populus euphratica]	[more]
gi\|1012118075\|ref\|XP_015961636.1\|	1.8e-39	57.71	PREDICTED: uncharacterized protein LOC107485611 [Arachis duranensis]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh17G000150	CmoCh17G000150	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh17G000150.1	CmoCh17G000150.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh17G000150.1.exon.1	CmoCh17G000150.1.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh17G000150.1.CDS.1	CmoCh17G000150.1.CDS.1	CDS

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37697	FAMILY NOT NAMED	coord: 1..177 score: 7.0
None	No IPR available	PANTHER	PTHR37697:SF1	SUBFAMILY NOT NAMED	coord: 1..177 score: 7.0