CmoCh16G012740.1 (mRNA) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCAGTATGGGGGGAAGGCAAAGAACTTACAGCGCCAATTCGACTGATTATAAGCTTCTTGAAGAGATTGGTTATGGTGCTAGTGCCACTGTTTTTAGAGCGATCTATACTCCGTCTAATGAAGTTGTCGCCATCAAATGTTTGGATCTTGATCGCTGCAATAGTAATTTTGTGAGTTTTCTCTCTTGTTTTATTGCTCCTTCTGTTGTTTCTGCTCTGAATTGTTGTTAATTAGCTCAATTTTGTGTTTCTGTAATTGCTTAATTGACCTTCCGGCTTTGTTTGTTTAAGATCGGGTTTGAGTTGTTATTGATTTGGATAGTTTGTGTTCATGTGGGGGTGAAGAGGTGCTTGCTGATTTGCTTAACGCCATGATAATTTGGTACCTTTTACTACATATGTTTTCTTTCATCCTTTTGTGATGTAGGATTTGTTAAATTTCTGTAGTTTTGATCTTTTATATTTGTTGGTGAAATTTCGGGGGATATGAGTATAATTGTACACGACAACTTTCGTGGTTTCTCGTGAGGTTAGTTTATGTATATAAACTGAAGTGACTTCAGTTTGACTGTTTCCCTGTTCCATTATTCTTGCGATTGATTCACGCTACACCGGCAAGCAAGGAACAGGGGCCTAGTTTTTTACTTTCACAAATATTTAACTAGAAATTTGTAATACTTTTCTAATCGGAAAATTTGAGCCTTTGAGCTACACGGATATGAATATTACTGAGGAAAATGGATGCTGTGAATGTGGGATATAAATTACGTCAAGAAAAGTTCAGGATGAGCAATATTTTCATTTTCTATTAGGAGTTTCAAGAATGGAGTGACTTTAGCACGGGGTCGGGGTTGAGTTATTCTGAAGGCTGCAAGAAATGTTAGATAGTAGAAACCTAGTCGATATGTTTTGTCAATACCATATTAAATAGAACAAACCAACTTCCCTATGGAGTGGCTTCTATATTTTCCGCTATCGTAAAACAACGACCGAAGTTACGAAAATTTCCCCCTAGCTTCTCTAACTTTTTTGATAAGGTAGTATTGTTGGTACATAAGAAAAAGGACGGGAAATGAGCTCATATCATCTGCCTGGAACCCAGATATAATCAACAACCTTCCAAAGTTTCTCCCAAAGTGAAGACAATAGAGTGAGTAATTCACTGAAAGTAGGTCTTGGTTTCCATCTCTTGATTGTGAAGTACTTTTTGAAGTGATAATGGTAAAGATATGCAGGGTCCCCTTTTTATATCATCATCGGTAGCTACGAGAGGTTTGTTACATACACTCCAGCCCCTGTCTCTATATGTGCATGCGTGCATGCCTATAGGAAGCTAAAAAGAGTTCTACAAAAAACAATTACAAGAAGTGATGGATTACCAATCCAGTTCACAAACAAAAAAATTTATGAAAACCACACTTGGCCGAAGATGGCCCCTTAAAGTTTTTATCACTCACGATGATAATCATATCGGGCTCTTTGATAGCCACAAAGGCATTTTGTTTTTAGATTCTGGTTTCTTGCGTGCAACATTATTTGGAACCAGTGGATTATTATATTGTGGTTTCTTAATGTAATTTATTGGTGTTTCTCATATTTTTTCCGTACCCTTTTCAGATTTCGTTCTCAACCCTCTTTGTTTTAGCTTTAAATGCTTACTCAGAGTCCGATTTTGACAGGATGATATACGTAGGGAGGCTCAAACAATGAGTTTGATAGATCATCCTAACATTGTAAGGGCTTATTGTTCATTTGTTGTTGAACGAGACCTTTGGGTTGTCATGCCATTCATGGCAGAGGGTTCTTGTTTGCACCTAATGAAGACAGCGTACTCAGATGGCTTTGAAGAGGTTGCTATTTGTTCTATCCTGAAAGAGACTCTTAAAGCTTTGGAGTACCTTCATCGCCAGGGACACATACATCGGGATGTGAAGGTCTATTAACTCCATTCACATTAATTCTTGGTTTTGTTCCCTTCCCGCTTCAAGCTTAACCATATAATGAGAAGGCTATTATTTTATCATCTTTTAATATGTCTGTTTGCAGGCTGGAAATATACTACTTGATAGTAATGGGGCTGTGAAGCTTGCTGATTTTGGTGTTTCAGCTTGCATGTTTGAAACAGGCGATAGACAGCGCGCCAGAAATACCTTCACGGGAACCCCATGCTGGTAA ATGGGCAGTATGGGGGGAAGGCAAAGAACTTACAGCGCCAATTCGACTGATTATAAGCTTCTTGAAGAGATTGGTTATGGTGCTAGTGCCACTGTTTTTAGAGCGATCTATACTCCGTCTAATGAAGTTGTCGCCATCAAATGTTTGGATCTTGATCGCTGCAATAAGGGTTCTTGTTTGCACCTAATGAAGACAGCGTACTCAGATGGCTTTGAAGAGGTTGCTATTTGTTCTATCCTGAAAGAGACTCTTAAAGCTTTGGAGTACCTTCATCGCCAGGGACACATACATCGGGATGTGAAGGCTGGAAATATACTACTTGATAGTAATGGGGCTGTGAAGCTTGCTGATTTTGGTGTTTCAGCTTGCATGTTTGAAACAGGCGATAGACAGCGCGCCAGAAATACCTTCACGGGAACCCCATGCTGGTAA ATGGGCAGTATGGGGGGAAGGCAAAGAACTTACAGCGCCAATTCGACTGATTATAAGCTTCTTGAAGAGATTGGTTATGGTGCTAGTGCCACTGTTTTTAGAGCGATCTATACTCCGTCTAATGAAGTTGTCGCCATCAAATGTTTGGATCTTGATCGCTGCAATAAGGGTTCTTGTTTGCACCTAATGAAGACAGCGTACTCAGATGGCTTTGAAGAGGTTGCTATTTGTTCTATCCTGAAAGAGACTCTTAAAGCTTTGGAGTACCTTCATCGCCAGGGACACATACATCGGGATGTGAAGGCTGGAAATATACTACTTGATAGTAATGGGGCTGTGAAGCTTGCTGATTTTGGTGTTTCAGCTTGCATGTTTGAAACAGGCGATAGACAGCGCGCCAGAAATACCTTCACGGGAACCCCATGCTGGTAA
BLAST of CmoCh16G012740.1 vs. Swiss-Prot
Match: FRAY2_DICDI (Serine/threonine-protein kinase fray2 OS=Dictyostelium discoideum GN=fray2 PE=3 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 3.8e-27 Identity = 72/179 (40.22%), Postives = 92/179 (51.40%), Query Frame = 1
BLAST of CmoCh16G012740.1 vs. Swiss-Prot
Match: GCK3_CAEEL (Germinal center kinase 3 OS=Caenorhabditis elegans GN=gck-3 PE=1 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 2.6e-23 Identity = 68/180 (37.78%), Postives = 87/180 (48.33%), Query Frame = 1
BLAST of CmoCh16G012740.1 vs. Swiss-Prot
Match: STK39_RAT (STE20/SPS1-related proline-alanine-rich protein kinase OS=Rattus norvegicus GN=Stk39 PE=1 SV=2) HSP 1 Score: 107.5 bits (267), Expect = 1.3e-22 Identity = 67/176 (38.07%), Postives = 84/176 (47.73%), Query Frame = 1
BLAST of CmoCh16G012740.1 vs. Swiss-Prot
Match: STK39_MOUSE (STE20/SPS1-related proline-alanine-rich protein kinase OS=Mus musculus GN=Stk39 PE=1 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 1.3e-22 Identity = 67/176 (38.07%), Postives = 84/176 (47.73%), Query Frame = 1
BLAST of CmoCh16G012740.1 vs. Swiss-Prot
Match: STK39_HUMAN (STE20/SPS1-related proline-alanine-rich protein kinase OS=Homo sapiens GN=STK39 PE=1 SV=3) HSP 1 Score: 107.5 bits (267), Expect = 1.3e-22 Identity = 67/176 (38.07%), Postives = 84/176 (47.73%), Query Frame = 1
BLAST of CmoCh16G012740.1 vs. TrEMBL
Match: A0A0A0L4Y7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G002910 PE=4 SV=1) HSP 1 Score: 220.3 bits (560), Expect = 1.5e-54 Identity = 121/185 (65.41%), Postives = 130/185 (70.27%), Query Frame = 1
BLAST of CmoCh16G012740.1 vs. TrEMBL
Match: M5WCT3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002015mg PE=4 SV=1) HSP 1 Score: 212.2 bits (539), Expect = 4.1e-52 Identity = 112/185 (60.54%), Postives = 126/185 (68.11%), Query Frame = 1
BLAST of CmoCh16G012740.1 vs. TrEMBL
Match: A0A061G230_THECC (Serine/threonine-protein kinase fray2 isoform 2 OS=Theobroma cacao GN=TCM_015658 PE=4 SV=1) HSP 1 Score: 201.8 bits (512), Expect = 5.5e-49 Identity = 110/185 (59.46%), Postives = 124/185 (67.03%), Query Frame = 1
BLAST of CmoCh16G012740.1 vs. TrEMBL
Match: A0A061G2V0_THECC (Kinase superfamily protein isoform 3 OS=Theobroma cacao GN=TCM_015658 PE=4 SV=1) HSP 1 Score: 201.8 bits (512), Expect = 5.5e-49 Identity = 110/185 (59.46%), Postives = 124/185 (67.03%), Query Frame = 1
BLAST of CmoCh16G012740.1 vs. TrEMBL
Match: A0A061GA30_THECC (Serine/threonine-protein kinase fray2 isoform 1 OS=Theobroma cacao GN=TCM_015658 PE=4 SV=1) HSP 1 Score: 201.8 bits (512), Expect = 5.5e-49 Identity = 110/185 (59.46%), Postives = 124/185 (67.03%), Query Frame = 1
BLAST of CmoCh16G012740.1 vs. TAIR10
Match: AT4G24100.1 (AT4G24100.1 Protein kinase superfamily protein) HSP 1 Score: 168.3 bits (425), Expect = 3.4e-42 Identity = 75/88 (85.23%), Postives = 81/88 (92.05%), Query Frame = 1
BLAST of CmoCh16G012740.1 vs. TAIR10
Match: AT1G70430.1 (AT1G70430.1 Protein kinase superfamily protein) HSP 1 Score: 164.9 bits (416), Expect = 3.8e-41 Identity = 83/181 (45.86%), Postives = 104/181 (57.46%), Query Frame = 1
BLAST of CmoCh16G012740.1 vs. TAIR10
Match: AT4G10730.1 (AT4G10730.1 Protein kinase superfamily protein) HSP 1 Score: 164.1 bits (414), Expect = 6.4e-41 Identity = 73/88 (82.95%), Postives = 79/88 (89.77%), Query Frame = 1
BLAST of CmoCh16G012740.1 vs. TAIR10
Match: AT5G14720.1 (AT5G14720.1 Protein kinase superfamily protein) HSP 1 Score: 156.8 bits (395), Expect = 1.0e-38 Identity = 70/87 (80.46%), Postives = 79/87 (90.80%), Query Frame = 1
BLAST of CmoCh16G012740.1 vs. TAIR10
Match: AT1G79640.1 (AT1G79640.1 Protein kinase superfamily protein) HSP 1 Score: 147.1 bits (370), Expect = 8.1e-36 Identity = 64/87 (73.56%), Postives = 74/87 (85.06%), Query Frame = 1
BLAST of CmoCh16G012740.1 vs. NCBI nr
Match: gi|778674804|ref|XP_011650299.1| (PREDICTED: serine/threonine-protein kinase dst1 isoform X1 [Cucumis sativus]) HSP 1 Score: 220.3 bits (560), Expect = 2.1e-54 Identity = 121/185 (65.41%), Postives = 130/185 (70.27%), Query Frame = 1
BLAST of CmoCh16G012740.1 vs. NCBI nr
Match: gi|778674815|ref|XP_011650300.1| (PREDICTED: serine/threonine-protein kinase dst1 isoform X2 [Cucumis sativus]) HSP 1 Score: 220.3 bits (560), Expect = 2.1e-54 Identity = 121/185 (65.41%), Postives = 130/185 (70.27%), Query Frame = 1
BLAST of CmoCh16G012740.1 vs. NCBI nr
Match: gi|778674817|ref|XP_011650301.1| (PREDICTED: serine/threonine-protein kinase BLUS1 isoform X3 [Cucumis sativus]) HSP 1 Score: 220.3 bits (560), Expect = 2.1e-54 Identity = 121/185 (65.41%), Postives = 130/185 (70.27%), Query Frame = 1
BLAST of CmoCh16G012740.1 vs. NCBI nr
Match: gi|645267814|ref|XP_008239246.1| (PREDICTED: serine/threonine-protein kinase BLUS1-like isoform X2 [Prunus mume]) HSP 1 Score: 214.5 bits (545), Expect = 1.2e-52 Identity = 113/185 (61.08%), Postives = 127/185 (68.65%), Query Frame = 1
BLAST of CmoCh16G012740.1 vs. NCBI nr
Match: gi|645267812|ref|XP_008239245.1| (PREDICTED: serine/threonine-protein kinase BLUS1-like isoform X1 [Prunus mume]) HSP 1 Score: 214.5 bits (545), Expect = 1.2e-52 Identity = 113/185 (61.08%), Postives = 127/185 (68.65%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
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