CmoCh16G012590.1 (mRNA) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAATTTCCAACGCTAAAACGGCGTCGTACGGTGCCCATTGGTCGAACAATTATTGGAAAATGCCAATTTAATGGAGTGGTTGGCTACAGGCGGCCATTCTAGAACGGAGAAAAATTCGTCCAAGTTCGTGTTTGTGGCGACCACACGTCTGAACTTGCTCCTTCTCTCTTCTTTGCTGCGATTTTCCGGCGTCAATCACTCGAAGAGATTCACTTTCTTCGGTATTTTATCTCATTTCGAACGCTTCGGGTTTTTCTTTTCTTGATTTTTCCATGTTTTTCGATGTCAATTTTGTGGCTTCTTCATTTTTCAAGCTGAAGGAAAATCCAATTTGTAGGGCTTTGTATGATCAGATATTAGTATTCCGAATTCTCCTGCTTATGAAATTTCAGTGTGTGTTTTTATGTCATCGCCATGATTGTCTTGAAATTTTGTACGAATTACTCTCTCGCTGCGGGAGGTTGATGTGATTGATTTTACGGCTGGAGAAACTCTTCCGGCTTTATTCTTGTTCGTGCCGACGGTACATGCTATTGAGTTGTTTAGATCTTGTTTTCTGTGGTTGGTTTGTTATTTGAAAGGTTTAATTGGAGCATAAGGTTTTCAAAATCTTCTATCATCCGGGAGTTTGTTTGCGCGGAGTTCCTTGTTTGGTTGTAAGCTATAGATTATTTATTGGCCACCATTTATGGTTGTCAATTTCTCTTTGACTTTGTCCTTTTTTTCTGGACTCTGGTTGTCGAAGATTGACGTGACAGAGAATCGTCTTTATGATGTGTTTTTCTGTTTGAACGAGTTTGATTCAGCACTGGTCTCGTGAGGGTTGGTGTACCTCGAAATTTAAAACCATGTAATTCTAATATCTAATGTATGAGGAAGAACAAACTACCTTTTGTTGGCCTTTTGGAATTGGGGCGTGTGAAATAAGTAGTGGCTTGGGGAAGGGGAAATAGGATCAAACTACAAAGTAAGGGGAAGTTTAGTATGTATGTGCGAGTCCCACATCGATTGGGGAGGGGAACGAAACATTTTTTATAAGGGTGTGGAAACCTCTCCCTAGCAAACAACATTTTCAAAACCTTGAGGGGAAGCTCGAAAGGGAATGCCTAAAGAGGATAATATCTGCTAGGGGTGGACTTGGGCTGTTATAAATGGTATTAGAGCCTGGCACATCGCCCACTTGGGCTGTTATAAATGGTATTAGAGCCAGACATCGGGCGATGTGCCAGCGAGGAGGCTGAGCCCTGAAGGGGGGTGGACACAAGGTGGTGTGCCAGCAAGGACGCTGTCCCCTAGGGGGGAATGGATTGGGGGGTCTCACATCAATTGAAGAAGGGAACGAGTGCCTGCAGGCCCTTAAGGGGGGGTGGGGGTGGACACAAGGTGGTGTGCTAGCAAGGACGTTGACCCCCTAAGGGGGATGGATTGGGGGGTATCACATCGATTGAAGAAGGGAATGAGTGAAGGGGGAGGGTGAATTGTGAGATCCCACACCGATTGGGGAGGGAGAACGAAACATTTTTTATAAGGGTGTGGAAACCTCTCCCTAGCAGATGCATTTTAAAAACCTTGAGGGAAAGCCCAAGTAATGGGCTTGAGCTTAAAAACCTTGAGGGGGAGCTCAAAGAAGACAATATCTACTAGTAGTGGCCTTGGGCCATTACCGTACGAGACGAATTTCGTGTGAGATTAGTCAGGGTTCATGTAAGATAGCTCGTATACACACAGTATAAAAACAAAATGAAATTGAAGAGAAGCTATGATATGAAATGAACTGATATGTTTGCAGTGTTATCTGTTTATAAAGTTCCCTTGTGCTTTGCTTTTACCCTTCGTGTCTTAAAACATGGAAGTTGATAATTATTTAACCTAGAGGGAATCTTGACCTTTCTACTTTCTATCCCCTTCTGTTTCTTATCTCCGTATACTTGCAGGAAAACTCTTACTGAGAAGCAGTGATGGACTTTATATTCAGAGGAATGAATGATGAGTCATCCGAGTGCTACTCTAATGAAATGGACATTCAGAGATGCCCTTTCCTCAGGAATATCAATAAACCAACCTGCTTTTCCTTCTCCACCATGAATTTCACCTTCCCGGTAACTTCCTTATCTGCTATCCCCTTTTACAGTGGCAGATCTGTTTTAGAAAAGTCTTATATCGTTTTGTATTTTCAGGTTCGGGGAGCGAAAGGGCCAATTTTTGAGGATGGTCCTAATTTTGACACAGCGTTTAAGCTCTTTCATGGTAAAGATGGGGTTGTTCCACTACCTGAGAAATCCATCTTTGAGACCTCATTGCCAGAACCAGAGACTGCTCCTCATTTCAACCCCCTGGCAGCAAAAGCTGCAACCATCAGTCTATCGGCTTTCGGACCGGGAGGGCCATTCAGCTTTGGGAGCTTCTCTGAGAAATGGAAGAAACAAAAGTCTGAGGCTTCCAACAAGAAAGATCATTCGTCACAGGTAGATTCGCACTCTCTTTAAGCTTTAAACTTGATACACAAAGTTGGATCATCTGTAGTACTTTTTATAAGGGGTAGCTACTTCAATGGAGACTGAACTTCATAGTTAATACAATTTGCTTACAAAAATTTGATTTTCGTTATGTCTGTTGCACGGGGCGGGGCATAGCTTTGGACATGAAAAAAGGGCAAGAATTTGACATGCATAGAAATCTTGAATCTAGCCTGGTTATGAAGGAAAGCTAGAAAATATGGGACTTAGAACTTGTGATAATATCGCATGCGGGTGGGATATAGTCTGATTATATAATGTTTGGAAGACTTTTACCCAAGTCCATGTGTAATGGCCCAGATCGTTAGCAGATATTGTCCTCTTTGGACTTTCCCTTTTGGGCTTCCCTCAAGGCTTTAAAACGCGTCTAATGGTGGTTTGTTCTCCTCCCCAACCAATGTGGGACATCACACCATGTCAGATCTTTCTTATTCCAAACAACACAACTTTAAGATCATTTCTAGATTTTCAATTTGAATTATAGTTGTTTGCTCGATTAAAGTTGGGGAGGCTTTTGCTGATGGGCCTTCTTCTTCCTGTATTAGTTTCATATCTGTTTCTTGCATGTTTTCCAGAAAAAAGGAGGTTCATCGAAGCACGAGGCTCTGGGAAGTGAGTGGCTGGAAACAGGGAACTGCCCAATTGCCAAGTCTTTTAGAGCTGTTAGCGGAGTCCTCCCTCTTGTTGCAACAGCTTTTCAGCCACCACCTGGTATGAAGCTTAAGTGCCCCCCTGCTATAGTCGCTGCCCGAGCTGCCCTTGCTCGTACAGCATTCGTGAAAAATCTGCGTCCTCAACCGCTTCCTTCAAAAATGCTCGTCATTGCGGCCTTAGGCATGGCAGCAAACGTTCCTCTTGGTATATGGAGGGAGCACACTAAGAAGTTTTCATTTTCATGGTTTGTGGCAATTCATGCAGCTGTACCCTTTATTGGCATGCTTCGGAAATGTGTCTTGATGCCAAAGACGGCCATGGCAATGACCATTGCAGCTTCTATACTAGGGCAGGTTATTGGTTCGAGGGCTGAACGTATGCGTCTGAAAGCTATTTCCGAGAAGGGGAAGGCAACGACAGTTATACCAACGCTAGATACTACTCCAAGCTATGAGTTAACCCAGGTCGATGCCATTGTAGGTGGTCGTTGTGGCGTTGAAAGAATGGTGTTCGATCCTCTCCAGAAGGATGGTAGGCAGACGTCAACCCCAGCAAATGTATGCTCATAAGGCGACTTCGTATAAATACAAGCATATTACAAAATAATGAAGTGCCGTCGATATCGGTTATTCGGTTGTGGGACTCGACCTTCGACCTGTTGTGAAATGTAGATCTAATTGATATTCAACCCTAATGGCTGGTTATCATATAATGTTATGCATTATGCTTTTGATTAGCGACTCTTTAGCTAAATATAAATAAATAAATAAATCCTTCTTGATGAGTGGCTGAATGTTATCTCAGTTCATGGGGTGTACGCAGCTCAAGCCCTGTTGCATTCTGGCGATTACGAACGGACCATTATTATAATCCATTATGATCTGACGAAAGGATCCTGGTAATAGCTCTTTCAATATTGGTA AAAATTTCCAACGCTAAAACGGCGTCGTACGGTGCCCATTGGTCGAACAATTATTGGAAAATGCCAATTTAATGGAGTGGTTGGCTACAGGCGGCCATTCTAGAACGGAGAAAAATTCGTCCAAGTTCGTGTTTGTGGCGACCACACGTCTGAACTTGCTCCTTCTCTCTTCTTTGCTGCGATTTTCCGGCGTCAATCACTCGAAGAGATTCACTTTCTTCGGAAAACTCTTACTGAGAAGCAGTGATGGACTTTATATTCAGAGGAATGAATGATGAGTCATCCGAGTGCTACTCTAATGAAATGGACATTCAGAGATGCCCTTTCCTCAGGAATATCAATAAACCAACCTGCTTTTCCTTCTCCACCATGAATTTCACCTTCCCGGTTCGGGGAGCGAAAGGGCCAATTTTTGAGGATGGTCCTAATTTTGACACAGCGTTTAAGCTCTTTCATGGTAAAGATGGGGTTGTTCCACTACCTGAGAAATCCATCTTTGAGACCTCATTGCCAGAACCAGAGACTGCTCCTCATTTCAACCCCCTGGCAGCAAAAGCTGCAACCATCAGTCTATCGGCTTTCGGACCGGGAGGGCCATTCAGCTTTGGGAGCTTCTCTGAGAAATGGAAGAAACAAAAGTCTGAGGCTTCCAACAAGAAAGATCATTCGTCACAGAAAAAAGGAGGTTCATCGAAGCACGAGGCTCTGGGAAGTGAGTGGCTGGAAACAGGGAACTGCCCAATTGCCAAGTCTTTTAGAGCTGTTAGCGGAGTCCTCCCTCTTGTTGCAACAGCTTTTCAGCCACCACCTGGTATGAAGCTTAAGTGCCCCCCTGCTATAGTCGCTGCCCGAGCTGCCCTTGCTCGTACAGCATTCGTGAAAAATCTGCGTCCTCAACCGCTTCCTTCAAAAATGCTCGTCATTGCGGCCTTAGGCATGGCAGCAAACGTTCCTCTTGGTATATGGAGGGAGCACACTAAGAAGTTTTCATTTTCATGGTTTGTGGCAATTCATGCAGCTGTACCCTTTATTGGCATGCTTCGGAAATGTGTCTTGATGCCAAAGACGGCCATGGCAATGACCATTGCAGCTTCTATACTAGGGCAGGTTATTGGTTCGAGGGCTGAACGTATGCGTCTGAAAGCTATTTCCGAGAAGGGGAAGGCAACGACAGTTATACCAACGCTAGATACTACTCCAAGCTATGAGTTAACCCAGGTCGATGCCATTGTAGGTGGTCGTTGTGGCGTTGAAAGAATGGTGTTCGATCCTCTCCAGAAGGATGGTAGGCAGACGTCAACCCCAGCAAATGTATGCTCATAAGGCGACTTCGTATAAATACAAGCATATTACAAAATAATGAAGTGCCGTCGATATCGGTTATTCGGTTGTGGGACTCGACCTTCGACCTGTTGTGAAATGTAGATCTAATTGATATTCAACCCTAATGGCTGGTTATCATATAATGTTATGCATTATGCTTTTGATTAGCGACTCTTTAGCTAAATATAAATAAATAAATAAATCCTTCTTGATGAGTGGCTGAATGTTATCTCAGTTCATGGGGTGTACGCAGCTCAAGCCCTGTTGCATTCTGGCGATTACGAACGGACCATTATTATAATCCATTATGATCTGACGAAAGGATCCTGGTAATAGCTCTTTCAATATTGGTA ATGGACTTTATATTCAGAGGAATGAATGATGAGTCATCCGAGTGCTACTCTAATGAAATGGACATTCAGAGATGCCCTTTCCTCAGGAATATCAATAAACCAACCTGCTTTTCCTTCTCCACCATGAATTTCACCTTCCCGGTTCGGGGAGCGAAAGGGCCAATTTTTGAGGATGGTCCTAATTTTGACACAGCGTTTAAGCTCTTTCATGGTAAAGATGGGGTTGTTCCACTACCTGAGAAATCCATCTTTGAGACCTCATTGCCAGAACCAGAGACTGCTCCTCATTTCAACCCCCTGGCAGCAAAAGCTGCAACCATCAGTCTATCGGCTTTCGGACCGGGAGGGCCATTCAGCTTTGGGAGCTTCTCTGAGAAATGGAAGAAACAAAAGTCTGAGGCTTCCAACAAGAAAGATCATTCGTCACAGAAAAAAGGAGGTTCATCGAAGCACGAGGCTCTGGGAAGTGAGTGGCTGGAAACAGGGAACTGCCCAATTGCCAAGTCTTTTAGAGCTGTTAGCGGAGTCCTCCCTCTTGTTGCAACAGCTTTTCAGCCACCACCTGGTATGAAGCTTAAGTGCCCCCCTGCTATAGTCGCTGCCCGAGCTGCCCTTGCTCGTACAGCATTCGTGAAAAATCTGCGTCCTCAACCGCTTCCTTCAAAAATGCTCGTCATTGCGGCCTTAGGCATGGCAGCAAACGTTCCTCTTGGTATATGGAGGGAGCACACTAAGAAGTTTTCATTTTCATGGTTTGTGGCAATTCATGCAGCTGTACCCTTTATTGGCATGCTTCGGAAATGTGTCTTGATGCCAAAGACGGCCATGGCAATGACCATTGCAGCTTCTATACTAGGGCAGGTTATTGGTTCGAGGGCTGAACGTATGCGTCTGAAAGCTATTTCCGAGAAGGGGAAGGCAACGACAGTTATACCAACGCTAGATACTACTCCAAGCTATGAGTTAACCCAGGTCGATGCCATTGTAGGTGGTCGTTGTGGCGTTGAAAGAATGGTGTTCGATCCTCTCCAGAAGGATGGTAGGCAGACGTCAACCCCAGCAAATGTATGCTCATAA
BLAST of CmoCh16G012590.1 vs. TrEMBL
Match: A0A0A0L1Q1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G005570 PE=4 SV=1) HSP 1 Score: 634.4 bits (1635), Expect = 8.3e-179 Identity = 321/358 (89.66%), Postives = 336/358 (93.85%), Query Frame = 1
BLAST of CmoCh16G012590.1 vs. TrEMBL
Match: A0A067L5J4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02765 PE=4 SV=1) HSP 1 Score: 495.0 bits (1273), Expect = 7.9e-137 Identity = 248/359 (69.08%), Postives = 283/359 (78.83%), Query Frame = 1
BLAST of CmoCh16G012590.1 vs. TrEMBL
Match: M5W9S6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007844mg PE=4 SV=1) HSP 1 Score: 490.0 bits (1260), Expect = 2.5e-135 Identity = 249/357 (69.75%), Postives = 288/357 (80.67%), Query Frame = 1
BLAST of CmoCh16G012590.1 vs. TrEMBL
Match: B9S1M0_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0866500 PE=4 SV=1) HSP 1 Score: 481.9 bits (1239), Expect = 6.9e-133 Identity = 244/363 (67.22%), Postives = 280/363 (77.13%), Query Frame = 1
BLAST of CmoCh16G012590.1 vs. TrEMBL
Match: G7K6U8_MEDTR (Transmembrane protein, putative OS=Medicago truncatula GN=MTR_5g026910 PE=4 SV=1) HSP 1 Score: 476.5 bits (1225), Expect = 2.9e-131 Identity = 242/358 (67.60%), Postives = 286/358 (79.89%), Query Frame = 1
BLAST of CmoCh16G012590.1 vs. TAIR10
Match: AT5G45410.1 (AT5G45410.1 unknown protein) HSP 1 Score: 400.2 bits (1027), Expect = 1.3e-111 Identity = 212/325 (65.23%), Postives = 248/325 (76.31%), Query Frame = 1
BLAST of CmoCh16G012590.1 vs. TAIR10
Match: AT4G25030.1 (AT4G25030.1 unknown protein) HSP 1 Score: 391.3 bits (1004), Expect = 6.2e-109 Identity = 207/332 (62.35%), Postives = 252/332 (75.90%), Query Frame = 1
BLAST of CmoCh16G012590.1 vs. NCBI nr
Match: gi|659095464|ref|XP_008448595.1| (PREDICTED: uncharacterized protein LOC103490724 [Cucumis melo]) HSP 1 Score: 644.4 bits (1661), Expect = 1.2e-181 Identity = 324/358 (90.50%), Postives = 338/358 (94.41%), Query Frame = 1
BLAST of CmoCh16G012590.1 vs. NCBI nr
Match: gi|449456773|ref|XP_004146123.1| (PREDICTED: uncharacterized protein LOC101211606 [Cucumis sativus]) HSP 1 Score: 634.4 bits (1635), Expect = 1.2e-178 Identity = 321/358 (89.66%), Postives = 336/358 (93.85%), Query Frame = 1
BLAST of CmoCh16G012590.1 vs. NCBI nr
Match: gi|802585560|ref|XP_012070494.1| (PREDICTED: uncharacterized protein LOC105632664 isoform X1 [Jatropha curcas]) HSP 1 Score: 495.0 bits (1273), Expect = 1.1e-136 Identity = 248/359 (69.08%), Postives = 283/359 (78.83%), Query Frame = 1
BLAST of CmoCh16G012590.1 vs. NCBI nr
Match: gi|645265320|ref|XP_008238096.1| (PREDICTED: uncharacterized protein LOC103336778 [Prunus mume]) HSP 1 Score: 491.9 bits (1265), Expect = 9.5e-136 Identity = 250/357 (70.03%), Postives = 288/357 (80.67%), Query Frame = 1
BLAST of CmoCh16G012590.1 vs. NCBI nr
Match: gi|595847330|ref|XP_007209303.1| (hypothetical protein PRUPE_ppa007844mg [Prunus persica]) HSP 1 Score: 490.0 bits (1260), Expect = 3.6e-135 Identity = 249/357 (69.75%), Postives = 288/357 (80.67%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
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